Clc11G05505 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAACTCTCAAAAGATGAGCTATCACGCTGGAGAAGCCAAGGGCCAAGCTCAGGTTTTTCATCTATTGTCATTGTTTTTCTTATCATACATCACTTTTTAAAAGTATATGAAATTTTATAATTTATTACCATCATTGAAAAATTATCCAAATTTATTTTTTCACATTTGATATTCAAAGAGTGATAGGTAACATGTCGGTTTGTGTTCTTATATAGGAAAAGGTGAGCAATATGATGGATAAGGCAGGCGATGCAGCTCAATCGGCTAAAGAGTCAATTCAAGAGGCAGGACAACAAATGAAAGCTAAGGCTCAAAGAGGTGCTGATGCTGTCAACAAATGA ATGGATAACTCTCAAAAGATGAGCTATCACGCTGGAGAAGCCAAGGGCCAAGCTCAGGAAAAGGTGAGCAATATGATGGATAAGGCAGGCGATGCAGCTCAATCGGCTAAAGAGTCAATTCAAGAGGCAGGACAACAAATGAAAGCTAAGGCTCAAAGAGGTGCTGATGCTGTCAACAAATGA ATGGATAACTCTCAAAAGATGAGCTATCACGCTGGAGAAGCCAAGGGCCAAGCTCAGGAAAAGGTGAGCAATATGATGGATAAGGCAGGCGATGCAGCTCAATCGGCTAAAGAGTCAATTCAAGAGGCAGGACAACAAATGAAAGCTAAGGCTCAAAGAGGTGCTGATGCTGTCAACAAATGA MDNSQKMSYHAGEAKGQAQEKVSNMMDKAGDAAQSAKESIQEAGQQMKAKAQRGADAVNK Homology
BLAST of Clc11G05505 vs. NCBI nr
Match: XP_038891124.1 (late embryogenesis abundant protein 7-like [Benincasa hispida]) HSP 1 Score: 95.5 bits (236), Expect = 1.6e-16 Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Clc11G05505 vs. NCBI nr
Match: XP_038891080.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 93.2 bits (230), Expect = 8.2e-16 Identity = 52/58 (89.66%), Postives = 53/58 (91.38%), Query Frame = 0
BLAST of Clc11G05505 vs. NCBI nr
Match: KAF3443960.1 (hypothetical protein FNV43_RR13650 [Rhamnella rubrinervis]) HSP 1 Score: 92.8 bits (229), Expect = 1.1e-15 Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of Clc11G05505 vs. NCBI nr
Match: XP_038891163.1 (stress-induced protein KIN2-like [Benincasa hispida]) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Clc11G05505 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia]) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15 Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of Clc11G05505 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 8.8e-16 Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of Clc11G05505 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.4e-15 Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of Clc11G05505 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.4e-15 Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
BLAST of Clc11G05505 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.4e-15 Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
BLAST of Clc11G05505 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.7e-15 Identity = 49/57 (85.96%), Postives = 52/57 (91.23%), Query Frame = 0
BLAST of Clc11G05505 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 69.3 bits (168), Expect = 1.2e-12 Identity = 37/59 (62.71%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of Clc11G05505 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 65.1 bits (157), Expect = 2.2e-11 Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of Clc11G05505 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 64.3 bits (155), Expect = 3.8e-11 Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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