Clc11G05310 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G05310
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Transcription factor MYB59-like
Location	ClcChr11: 5108524 .. 5110049 (+)
RNA-Seq Expression	Clc11G05310
Synteny	Clc11G05310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATGGATGGAAAAGAAGTACAAGAATGGAGGAAGGGACCTTGGACTTGTGAGGAAGACAAGTTGTTGTGTGAATATGTGAAGGTGCATGGGGAAGGAAGATGGACTTCTGTTGCCAATGGTTCAGGTGATAATTTTATTCTTTTCTTTTTCATCTCTCCCTTTCACAAAATTATGATTTGTTTTAACCTAGTGAATTATGCTCAAGTTACTTATAGTCAATCAGGTTGAAAAAAAAAAATTCAAACAAAGCATCTTAACTATATAGACTTAGATTAGGTGAAATTTCCATATACGTTAGAGTTAGACTATAACAATGCAGCGTAAAGTAATTTGTTTTTTCGGGTTGTTTTTTACAGGCTTGAATAGGACAGGAAAAAGTTGTAGATTGAGATGGGTAAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGTAACAAGTAAAAAATATCTCTCTAACCTAGCTATTTCAATTTCTTCAATAATTATTTTGCTTTTGATTTATTTAAAAATTAAGTTTATACACACTACTCTCACCCACCCATAAATTTCGTTATTTAGTTTATAAAAACTAATTTTTTGTGCTTTAATTTCATTAGAAATTCAAATGTTTCTTTAATATATATATATAATAAAGAAATTAAGAGAAAATTACAAATATAAATTTTAAGAATAGAAAACAAAAGATAAAACGGTTTTCAAATAAATCTAGGGACTTAACCATCTTAATTTTAAATGTTTTCTGTAGATGGTCTACCATAGCAAGATATTTACCCGGAAGAACCGACAACGAAATAAAAAACTATTGGAGAACTCATTTCAAGAAGATGAAACCAAAAAGAAAGACTCAAATAAATGTCCCAAAAACAGCAACAGTCAACAAAACATTTCCACCAATTACTAGCTCTAGAGAATATGGCATGGAGCTGATGAAACCATATGAAAGAGACGATGACTCAGCCATGGTTTTTACAGAGCCTGCAGCCATGGGAGATGAACTAAGCTACTTGTCAATGGTGTATCAAGATTTTGCAACTTGGGCGGCGGAGGCGGCCGCGGAGCAGGAGGAGGAGAGCTTATGGGGTGGCCTTTGGGAGGTCCCAGAGAATGATATCATATGACAATATATAACTAATTAATTTGAACATCTTTTTTTAAGAGACAAACTTTAAATTTGGTGTAAAATAAGGTTTATTTTTGGGGAGGGGTTCCTGAATAATTATGGAGAACAAATAAAGAAATGGAAAAGTGGCCCATGCAGGTTTCCAACCTGAAAAATGTGGCCCATATAGGTCTTAAACCTACGCACTATGTGTTGCAATATTTTAAAGAAAAAAGAGAAAAGTGTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATGTGCTCCAGAAAATTTTATCTAAAATAAATATTTAAATTAAACTGCTTCATTTG

mRNA sequence

ATAATGGATGGAAAAGAAGTACAAGAATGGAGGAAGGGACCTTGGACTTGTGAGGAAGACAAGTTGTTGTGTGAATATGTGAAGGTGCATGGGGAAGGAAGATGGACTTCTGTTGCCAATGGTTCAGGCTTGAATAGGACAGGAAAAAGTTGTAGATTGAGATGGGTAAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGTAACAAATGGTCTACCATAGCAAGATATTTACCCGGAAGAACCGACAACGAAATAAAAAACTATTGGAGAACTCATTTCAAGAAGATGAAACCAAAAAGAAAGACTCAAATAAATGTCCCAAAAACAGCAACAGTCAACAAAACATTTCCACCAATTACTAGCTCTAGAGAATATGGCATGGAGCTGATGAAACCATATGAAAGAGACGATGACTCAGCCATGGTTTTTACAGAGCCTGCAGCCATGGGAGATGAACTAAGCTACTTGTCAATGGTGTATCAAGATTTTGCAACTTGGGCGGCGGAGGCGGCCGCGGAGCAGGAGGAGGAGAGCTTATGGGGTGGCCTTTGGGAGGTCCCAGAGAATGATATCATATGACAATATATAACTAATTAATTTGAACATCTTTTTTTAAGAGACAAACTTTAAATTTGGTGTAAAATAAGGTTTATTTTTGGGGAGGGGTTCCTGAATAATTATGGAGAACAAATAAAGAAATGGAAAAGTGGCCCATGCAGGTTTCCAACCTGAAAAATGTGGCCCATATAGGTCTTAAACCTACGCACTATGTGTTGCAATATTTTAAAGAAAAAAGAGAAAAGTGTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATGTGCTCCAGAAAATTTTATCTAAAATAAATATTTAAATTAAACTGCTTCATTTG

Coding sequence (CDS)

ATGGATGGAAAAGAAGTACAAGAATGGAGGAAGGGACCTTGGACTTGTGAGGAAGACAAGTTGTTGTGTGAATATGTGAAGGTGCATGGGGAAGGAAGATGGACTTCTGTTGCCAATGGTTCAGGCTTGAATAGGACAGGAAAAAGTTGTAGATTGAGATGGGTAAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGTAACAAATGGTCTACCATAGCAAGATATTTACCCGGAAGAACCGACAACGAAATAAAAAACTATTGGAGAACTCATTTCAAGAAGATGAAACCAAAAAGAAAGACTCAAATAAATGTCCCAAAAACAGCAACAGTCAACAAAACATTTCCACCAATTACTAGCTCTAGAGAATATGGCATGGAGCTGATGAAACCATATGAAAGAGACGATGACTCAGCCATGGTTTTTACAGAGCCTGCAGCCATGGGAGATGAACTAAGCTACTTGTCAATGGTGTATCAAGATTTTGCAACTTGGGCGGCGGAGGCGGCCGCGGAGCAGGAGGAGGAGAGCTTATGGGGTGGCCTTTGGGAGGTCCCAGAGAATGATATCATATGA

Protein sequence

MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGDELSYLSMVYQDFATWAAEAAAEQEEESLWGGLWEVPENDII

Homology

[Close]

BLAST of Clc11G05310 vs. NCBI nr
Match: XP_038889193.1 (transcription factor MYB59-like [Benincasa hispida])

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 172/204 (84.31%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MDGKEVQEWRKGPWT EEDKLLCEYVKVHGEGRWTSVA GSGLNRTGKSCRLRWVNYLRP
Sbjct: 1   MDGKEVQEWRKGPWTVEEDKLLCEYVKVHGEGRWTSVAIGSGLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKRGH TPQEEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK +I
Sbjct: 61  GLKRGHFTPQEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAEI 120

Query: 121 NVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGDELSYLSMVYQDFA 180
             PKT   NKT PPIT+S E+  ELMKPYERD+D AM+FTEPAAM DE SYLSMVYQDF 
Sbjct: 121 IAPKTDN-NKTLPPITTSEEHVKELMKPYERDNDLAMLFTEPAAMEDEQSYLSMVYQDF- 180

Query: 181 TWAAEAAAEQEEESLWGGLWEVPE 205
                A A +EEESLWGGLWEV E
Sbjct: 181 --VIVADAVEEEESLWGGLWEVSE 200

[Close]

BLAST of Clc11G05310 vs. NCBI nr
Match: KAA0039423.1 (transcription factor MYB59-like [Cucumis melo var. makuwa] >TYK00611.1 transcription factor MYB59-like [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 8.3e-92
Identity = 169/216 (78.24%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MDGKE QEWRKGPWT EEDKLLCEYVKVHGEGRW+SVA GSGLNRTGKSCRLRWVNYLRP
Sbjct: 1   MDGKEEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKRGHLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKP+RK+QI
Sbjct: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPRRKSQI 120

Query: 121 NVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGD--ELSYLSMVYQD 180
            VPKT   NKT PPI+   E+ MELMKPY+  DD  MVFT+P AM D  +  YLS VYQD
Sbjct: 121 IVPKTD--NKTLPPISRCEEHVMELMKPYD-SDDLGMVFTDPTAMEDHEQTYYLSKVYQD 180

Query: 181 FATWAAEA------AAEQEEESLWGGLWEVPENDII 209
              W  E+       AEQEEESLW GLWEVPENDI+
Sbjct: 181 LTNWTVESVAVAAVVAEQEEESLWDGLWEVPENDIM 213

[Close]

BLAST of Clc11G05310 vs. NCBI nr
Match: XP_008459705.1 (PREDICTED: transcription factor MYB59-like [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 7.8e-90
Identity = 169/218 (77.52%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MDGKE QEWRKGPWT EEDKLLCEYVKVHGEGRW+SVA GSGLNRTGKSCRLRWVNYL+P
Sbjct: 1   MDGKEEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLKP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPK--RKT 120
           GLKRGHLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKPK  RK+
Sbjct: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPKPRRKS 120

Query: 121 QINVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGD--ELSYLSMVY 180
           QI VPKT   NKT PPI+   E  MELMKPY+  DD  MVFT+P AM D  +  YLS VY
Sbjct: 121 QIIVPKTD--NKTLPPISRCEERVMELMKPYD-SDDLGMVFTDPTAMEDHEQTYYLSKVY 180

Query: 181 QDFATWAAEA------AAEQEEESLWGGLWEVPENDII 209
           QD   W  E+       AEQEEESLW GLWEVPENDI+
Sbjct: 181 QDLTNWTVESGAVAAVVAEQEEESLWDGLWEVPENDIM 215

[Close]

BLAST of Clc11G05310 vs. NCBI nr
Match: XP_023554284.1 (transcription factor MYB59-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-83
Identity = 160/207 (77.29%), Postives = 173/207 (83.57%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MD +E +EWRKGPWT EEDKLL EYVKVHGEGRWTSVA GS LNRTGKSCRLRWVNYLRP
Sbjct: 1   MDAEE-KEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKRGHLTP EEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+ Q+
Sbjct: 61  GLKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQM 120

Query: 121 NVPKTATVNKTFPPITSSRE-YGMELMKPYERDDDS-AMVFTEPAAMGDELSYLSMVYQD 180
            VP+    NKT PPI+  ++    ++MKPYERD+D   MVFTEPAAM  + SYLSMVY+D
Sbjct: 121 VVPQPD--NKTSPPISFEQDREEKDMMKPYERDNDELGMVFTEPAAMAADQSYLSMVYED 180

Query: 181 FATWAAEAAAEQEEESLWGGLWEVPEN 206
           FATWAA AAA  EE  LWGGLWE   N
Sbjct: 181 FATWAAAAAA--EESYLWGGLWEDSNN 202

[Close]

BLAST of Clc11G05310 vs. NCBI nr
Match: XP_004141594.1 (transcription factor MYB59 [Cucumis sativus] >KAE8648947.1 hypothetical protein Csa_008986 [Cucumis sativus])

HSP 1 Score: 318.2 bits (814), Expect = 5.4e-83
Identity = 156/199 (78.39%), Postives = 168/199 (84.42%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           M+GKE QEWRKGPWT +EDKLLCEYVKVHGEGRW SVA GSGLNRTGKSCRLRWVNYLRP
Sbjct: 1   MEGKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKR HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK++I
Sbjct: 61  GLKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKI 120

Query: 121 NVPKTATVNKTFPPITSSREYGMELMKPYERD-DDSAMVFTEPAAMGD--ELSYLSMVYQ 180
            V KT   NKT PP+T   E+ MELMKPY+ D +D +MVFTEP AM D  +  YLSMVYQ
Sbjct: 121 MVGKTD--NKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQ 180

Query: 181 DFATWAAEAAAEQEEESLW 197
           D   W    AAE++EESLW
Sbjct: 181 DLTNW----AAEKKEESLW 193

[Close]

BLAST of Clc11G05310 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 3.7e-42
Identity = 78/123 (63.41%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           +E+RKGPWT +ED LL  +V + G+ RW  VA  SGLNRTGKSCRLRWVNYL PGLKRG 
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  ++ P ++
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMS-PTSS 125

Query: 127 TVN 130
           + N
Sbjct: 126 SSN 127

[Close]

BLAST of Clc11G05310 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 72/112 (64.29%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 10  RKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHLTP 69
           R+GPWT EED LL  Y+  HGEGRW S+A  +GL RTGKSCRLRW+NYLRP L+RG++TP
Sbjct: 21  RRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGNITP 80

Query: 70  QEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQIN 122
           QE+ +I+ELH+ WGN+WS IA++LPGRTDNEIKNYWRT  +K   + K  +N
Sbjct: 81  QEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVN 132

[Close]

BLAST of Clc11G05310 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.1e-41
Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 10  RKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHLTP 69
           RKGPWT +ED LL  +V + G+ RW  +A  SGLNRTGKSCRLRWVNYL PGLKRG +TP
Sbjct: 8   RKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTP 67

Query: 70  QEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTATVN 129
           QEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  ++ P ++  N
Sbjct: 68  QEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVS-PTSSFSN 127

Query: 130 KTFPPITSS 139
            +   +T++
Sbjct: 128 CSSSSVTTT 135

[Close]

BLAST of Clc11G05310 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.3e-41
Identity = 82/141 (58.16%), Postives = 103/141 (73.05%), Query Frame = 0


Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           +E RKGPWT +ED  L   V++ GE RW  +A  SGLNRTGKSCRLRWVNYL PGLKRG 
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           ++P EE +I+ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +RK+ ++ P ++
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNMS-PSSS 125

Query: 127 TVNKTFP---PITSSREYGME 145
           + + T+    P T S   G+E
Sbjct: 126 SSSLTYQSCHPETPSMIIGIE 145

[Close]

BLAST of Clc11G05310 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-40
Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 0


Query: 5   EVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKR 64
           E +E R+GPWT EED LL  Y+  +GEGRW  VA  +GL RTGKSCRLRW+NYL+P ++R
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 65  GHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPK 124
           G+LTPQE+ +I+ELH+ WGN+WS IA+YLPGRTDNEIKNYWRT  +K   +   + N  K
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

Query: 125 TATVNKTF 133
                ++F
Sbjct: 135 FFDAVRSF 142

[Close]

BLAST of Clc11G05310 vs. ExPASy TrEMBL
Match: A0A5A7T8Y5 (Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002300 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.0e-92
Identity = 169/216 (78.24%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MDGKE QEWRKGPWT EEDKLLCEYVKVHGEGRW+SVA GSGLNRTGKSCRLRWVNYLRP
Sbjct: 1   MDGKEEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKRGHLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKP+RK+QI
Sbjct: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPRRKSQI 120

Query: 121 NVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGD--ELSYLSMVYQD 180
            VPKT   NKT PPI+   E+ MELMKPY+  DD  MVFT+P AM D  +  YLS VYQD
Sbjct: 121 IVPKTD--NKTLPPISRCEEHVMELMKPYD-SDDLGMVFTDPTAMEDHEQTYYLSKVYQD 180

Query: 181 FATWAAEA------AAEQEEESLWGGLWEVPENDII 209
              W  E+       AEQEEESLW GLWEVPENDI+
Sbjct: 181 LTNWTVESVAVAAVVAEQEEESLWDGLWEVPENDIM 213

[Close]

BLAST of Clc11G05310 vs. ExPASy TrEMBL
Match: A0A1S3CAT1 (transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103498747 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.8e-90
Identity = 169/218 (77.52%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MDGKE QEWRKGPWT EEDKLLCEYVKVHGEGRW+SVA GSGLNRTGKSCRLRWVNYL+P
Sbjct: 1   MDGKEEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLKP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPK--RKT 120
           GLKRGHLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKPK  RK+
Sbjct: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPKPRRKS 120

Query: 121 QINVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGD--ELSYLSMVY 180
           QI VPKT   NKT PPI+   E  MELMKPY+  DD  MVFT+P AM D  +  YLS VY
Sbjct: 121 QIIVPKTD--NKTLPPISRCEERVMELMKPYD-SDDLGMVFTDPTAMEDHEQTYYLSKVY 180

Query: 181 QDFATWAAEA------AAEQEEESLWGGLWEVPENDII 209
           QD   W  E+       AEQEEESLW GLWEVPENDI+
Sbjct: 181 QDLTNWTVESGAVAAVVAEQEEESLWDGLWEVPENDIM 215

[Close]

BLAST of Clc11G05310 vs. ExPASy TrEMBL
Match: A0A0A0KSK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641610 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 155/197 (78.68%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 3   GKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGL 62
           GKE QEWRKGPWT +EDKLLCEYVKVHGEGRW SVA GSGLNRTGKSCRLRWVNYLRPGL
Sbjct: 31  GKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGL 90

Query: 63  KRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINV 122
           KR HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK++I V
Sbjct: 91  KRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMV 150

Query: 123 PKTATVNKTFPPITSSREYGMELMKPYERD-DDSAMVFTEPAAMGD--ELSYLSMVYQDF 182
            KT   NKT PP+T   E+ MELMKPY+ D +D +MVFTEP AM D  +  YLSMVYQD 
Sbjct: 151 GKTD--NKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDL 210

Query: 183 ATWAAEAAAEQEEESLW 197
             W    AAE++EESLW
Sbjct: 211 TNW----AAEKKEESLW 221

[Close]

BLAST of Clc11G05310 vs. ExPASy TrEMBL
Match: A0A6J1GRA0 (transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111456806 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.9e-82
Identity = 159/207 (76.81%), Postives = 171/207 (82.61%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MD +E +EWRKGPWT EEDKLL EYVKVHGEGRWTSVA GS LNRTGKSCRLRWVNYLRP
Sbjct: 1   MDAEE-KEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKRGHLTP EEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+ Q+
Sbjct: 61  GLKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQM 120

Query: 121 NVPKTATVNKTFPPITSSRE-YGMELMKPYERDDDS-AMVFTEPAAMGDELSYLSMVYQD 180
            VPK    NKT PPI+  ++    ++MKP  RD+D   MVFTEPAAM  + SYLSMVY+D
Sbjct: 121 VVPKPD--NKTSPPISFEQDREEKDMMKPCGRDNDELGMVFTEPAAMAADQSYLSMVYED 180

Query: 181 FATWAAEAAAEQEEESLWGGLWEVPEN 206
           FATWAA AAA  EE  LWGGLWE   N
Sbjct: 181 FATWAAAAAA--EESYLWGGLWEDSNN 202

[Close]

BLAST of Clc11G05310 vs. ExPASy TrEMBL
Match: A0A6J1JQZ1 (transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111487542 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.5e-80
Identity = 156/207 (75.36%), Postives = 170/207 (82.13%), Query Frame = 0


Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MD +E +EWRKGPWT EEDKLL EYVKVHGEGRWTSVA GS LNRTGKSCRLRWVNYLRP
Sbjct: 1   MDAEE-KEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKRGHLTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+ Q+
Sbjct: 61  GLKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQM 120

Query: 121 NVPKTATVNKTFPPITSSRE-YGMELMKPYERDD-DSAMVFTEPAAMGDELSYLSMVYQD 180
            VPK    NKT  PI+  ++    ++MK  ERD+ +  MVFTEPAAM  + SYLSMVY+D
Sbjct: 121 VVPKPD--NKTSAPISFEQDREEKDMMKLCERDNAELGMVFTEPAAMAADQSYLSMVYED 180

Query: 181 FATWAAEAAAEQEEESLWGGLWEVPEN 206
           FATWAA AAA  EE  LWGGLWE   N
Sbjct: 181 FATWAAAAAA--EESYLWGGLWEDSNN 202

[Close]

BLAST of Clc11G05310 vs. TAIR 10
Match: AT3G30210.1 (myb domain protein 121 )

HSP 1 Score: 214.2 bits (544), Expect = 1.0e-55
Identity = 111/209 (53.11%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           Q  RKGPWT EEDKLL EYV  HGEGRW++VA  +GLNR+GKSCRLRWVNYLRPGLKRG 
Sbjct: 25  QGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKRGQ 84

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           +TPQEEGII+ELH+LWGNKWSTIARYLPGRTDNEIKNYWRTH+KK +     Q  V K+ 
Sbjct: 85  ITPQEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSSKQDKVKKSL 144

Query: 127 T-----VNKTFPPITSSREYGMELMKP----YERDDDSAMVFTEPAAMGDELSYLSMVYQ 186
           +     V+    P   S  +  +L+       + D + A     P ++ D+  Y+    Q
Sbjct: 145 SRKQQQVDLKPQPQAQSENHQSQLVSQDHMNIDNDHNIASSLYYPTSVFDDKLYMP---Q 204

Query: 187 DFATWAAEAAAEQEEESLWGGLWEVPEND 207
             AT +++ +   +E  LWG LW + E+D
Sbjct: 205 SVATTSSDHSM-IDEGHLWGSLWNLDEDD 229

[Close]

BLAST of Clc11G05310 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 192.2 bits (487), Expect = 4.2e-49
Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 9   WRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHLT 68
           WRKGPWT EED+LL EYV+VHGEGRW SV+  +GL R GKSCRLRWVNYLRP LKRG +T
Sbjct: 6   WRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRGQIT 65

Query: 69  PQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 112
           P EE II+ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHFKK
Sbjct: 66  PHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKK 108

[Close]

BLAST of Clc11G05310 vs. TAIR 10
Match: AT3G24310.1 (myb domain protein 305 )

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-48
Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 3   GKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGL 62
           G   + WRKGPWT EED+LL +YV++HGEGRW SVA  +GL R GKSCRLRWVNYLRP L
Sbjct: 12  GMVEEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDL 71

Query: 63  KRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 112
           KRG +TP EE II+ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHFKK
Sbjct: 72  KRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKK 120

[Close]

BLAST of Clc11G05310 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43
Identity = 78/123 (63.41%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           +E+RKGPWT +ED LL  +V + G+ RW  VA  SGLNRTGKSCRLRWVNYL PGLKRG 
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  ++ P ++
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMS-PTSS 125

Query: 127 TVN 130
           + N
Sbjct: 126 SSN 127

[Close]

BLAST of Clc11G05310 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-42
Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 10  RKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHLTP 69
           RKGPWT +ED LL  +V + G+ RW  +A  SGLNRTGKSCRLRWVNYL PGLKRG +TP
Sbjct: 8   RKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTP 67

Query: 70  QEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTATVN 129
           QEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  ++ P ++  N
Sbjct: 68  QEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVS-PTSSFSN 127

Query: 130 KTFPPITSS 139
            +   +T++
Sbjct: 128 CSSSSVTTT 135

The following BLAST results are available for this feature:

BLAST of Clc11G05310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889193.1	1.1e-94	84.31	transcription factor MYB59-like [Benincasa hispida]	[more]
KAA0039423.1	8.3e-92	78.24	transcription factor MYB59-like [Cucumis melo var. makuwa] >TYK00611.1 transcrip...	[more]
XP_008459705.1	7.8e-90	77.52	PREDICTED: transcription factor MYB59-like [Cucumis melo]	[more]
XP_023554284.1	2.4e-83	77.29	transcription factor MYB59-like [Cucurbita pepo subsp. pepo]	[more]
XP_004141594.1	5.4e-83	78.39	transcription factor MYB59 [Cucumis sativus] >KAE8648947.1 hypothetical protein ...	[more]

BLAST of Clc11G05310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4JL84	3.7e-42	63.41	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q10MB4	1.1e-41	64.29	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
Q9LX82	3.1e-41	59.69	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q4JL76	5.3e-41	58.16	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q9C9G7	2.6e-40	57.81	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]

BLAST of Clc11G05310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8Y5	4.0e-92	78.24	Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CAT1	3.8e-90	77.52	transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103498747 PE=4 SV=...	[more]
A0A0A0KSK2	1.7e-82	78.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641610 PE=4 SV=1	[more]
A0A6J1GRA0	2.9e-82	76.81	transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111456806 PE...	[more]
A0A6J1JQZ1	3.5e-80	75.36	transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111487542 PE=4...	[more]

BLAST of Clc11G05310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G30210.1	1.0e-55	53.11	myb domain protein 121	[more]
AT4G13480.1	4.2e-49	80.58	myb domain protein 79	[more]
AT3G24310.1	1.6e-48	76.15	myb domain protein 305	[more]
AT5G59780.3	2.6e-43	63.41	myb domain protein 59	[more]
AT3G46130.1	2.2e-42	59.69	myb domain protein 48	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 10..60 e-value: 1.4E-14 score: 64.5 coord: 63..111 e-value: 7.9E-14 score: 62.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 6..58 score: 11.160925
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 59..109 score: 9.465514
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 68..109 e-value: 1.01084E-9 score: 50.2666
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 13..58 e-value: 2.95861E-10 score: 51.8074
None	No IPR available	GENE3D	1.10.10.60		coord: 66..132 e-value: 2.7E-20 score: 74.2
None	No IPR available	GENE3D	1.10.10.60		coord: 11..63 e-value: 2.0E-18 score: 68.1
None	No IPR available	PANTHER	PTHR45675:SF17	MYB TRANSCRIPTION FACTOR	coord: 5..203
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 65..108 e-value: 1.4E-13 score: 50.8 coord: 11..58 e-value: 2.3E-16 score: 59.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..113 score: 21.368599
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 10..62 score: 24.052984
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 5..203
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 9..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G05310.1	Clc11G05310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding