Clc11G04890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G04890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ATP-dependent Clp protease proteolytic subunit
Location	ClcChr11: 4692595 .. 4697053 (-)
RNA-Seq Expression	Clc11G04890
Synteny	Clc11G04890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATATTGTTGTAATTTCCATTAGTCTCTTTTGGTTTCACAGTGAAGCTCGATAACACAGCGCCATTCTCACAAGCTTCGCTCAAAATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCAGTTTCTCTGTCTCTTCGCACAATCGAACGTCATCCATTTCTCAACTTTCTCGAAGGTAATGCCTTTTGTTTTCCTCAACTATTTGCCTAATCCCCAACCACAGAACTCTAAATTCTTCCTCTCTTTTTTCTGGGTCTTTTCTGTAGAAATTCACACAGGTCGATAGTATCTGCCTTGCCGAGGCCATATGGTGACCCTTCGACAATTGGTAATTTGTTTTGTGCAATTGGGTGTTGCTGAACTTTTGTATATGATGATATAAATGCCCTAATTTTGTGTCAATTACTGATAATGTCATGAAACTAGTGAATTTCTTGTGTTCATGCTGAATTTATGGATATTCATGATCGAAACGGCACATATATCTGATTTTCCACCCATTTTTGAAGGATTATCGAGTAAAACAATGGGGGCACCTCTAAACCTTGACGATAAAGACTTTCTTCTCACCAGTACAAGGTTTGCACTGTTCCCCATTGGCATTGTTGGTTTAAATATCTTTTGTTGTTCTGATTTTAGCATTTACTGAATGTTTATTGATAGGCTTAAATTAACTTAACTTGGATTGCATTCTTTAAAATTGGGATGAAATATATACTGTAAATTGTGTCTATGCAACAACATCTTTTTGCGTAGTATTCCTTTATATTTTAGCTTTCTTTTCCCGTTACACATGATATTCTGCCTTATAATTTTATTTCTTTAACATGATGAAGTAATTAATCTGCTGGGTATTTTCTCTCGTCTGCAGTTATGGACCTATAGAGGCTAAGAAAGGTAATCCATCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCTATCGTGGCACAGCGAGTCATATCACAACTTGTGACTTTAGCAACAATTGACGAGGATGCAGATATCCTGGTGTGCAATAGAAAAATTAGCTCTCTCTTTTCCTCATTCTGTTTACTAGACTGTGATTCTTTATTTTTAATTTGTTTGTAAGCCTAGTTTTTGACCTTATTAGGTGTATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATTAGCAATTTATGATTGTATGTCTTGGGTAAGATTGCAAAGATCTCCCTCTATCTCCCTCTTTTATGTTTAGTTCTTTTATGCCTTATTCGTATGTTTATATTACTTTCATATCCATTTTTTCTGTCATTTATTTTGATTTAAGAGTTGTTTCTGATCTTCTAAGGTTCACAAAGTCAATAAGTCATTACGGGAAGCCATATCTATTATGCTACATACTTTAGTCTTGCATAAGATAATAGTAATAATCTCTAAATAGAACATATAATTCAAGCATATGATGCCTGTTATGATTTGGTTTGCTGTTTACAGAGCCATAACCTTCTATTAATCTGTCCATATTTTGAATGAAAGGAAGAGGATTCTTTTCTTATAAAAGATAATTGACTTGTGCTCTCAGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGAGCTCTTCTCCTTGCAGGTGGAGAAAAGGGGATGCGCTATGCCATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGTATGGCTAAAATTTTATTACGATCTTAGCTCATTTTTTAAAGAACATGATTATGATTATATGAGAGGAGAAGGGATGGTAGAATATATGTTCTCCTTTGTATTAAATTGCAAAAGTAATCTCTACTGTCTGTTGCAAGTCTTGATCGAAGCTGTTCCTTATGCCTCCTTTGTTCTTTTGATAACCCAGTGCTTTTCCAACTTCTAGTTTAAGCAAACAGTATGTTTTTTGTCTAGTTTTGAAATGGTCCAATATGTAAATCTTCTAGTAGGACTTCCTCCTAGTCCTACTTTTGAAATTGACAAATTGTGACTGGTGAGAACCAGCAAAAAATGAAGTAACTGACATTCTGCAATACGGTGATGTTTTTGGATGAGTGCAGGGTCATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCATGTCAGTATCTCTTTCTTACTTCTGAAATAAGCACTTACCATAAGTTTTTCCATTGCTTTGGATAATGCTTATGTGCCTTTTGTTGATTTTGCTCATGCCTGTTGCAACCAAAAACTAAAACAATTAGAGCTAATGAGAAATGGCTTTACCATGTATCCAACTTTTAACTGACCATAAGCTTGATTTCTGTCTGGTGACATTCTGACCTGAATCAATGTTGTGCAAGTAGGTGGTGAACGAGTCTAGATTGTCATGATTGTGGTGTATAATTGCTGTATGTCATAAAATTTACAGATGCAATATATAGGTCTATCTGGGATATCTTTTGGGAAAGATGTCGCAGTTGGGAATGTAGTATCTTCATCTTTAGGAAGCTGAACCATTGTAGACGGAAATGTAATTCATGAAATTAGGAGGGATTATTTTGTTTATATTCAACTTTCAAGCATAATGGAAGGTTAAAATCTTTGCCAACAGAAGTTGATTGGAAAGTTGCAGTCTTTGGCCAACCAAAAGTAATGAGATCTTGGGAGGAGGAGTTTAAATTTTATGGCGACCGCCTAACCATCATGAATTGGCTTAGTGGTTAATAAGGGGCATGACCTTGATAAAGGGCTAAGAGGTCATGAGTTCAATCTATAGTGGTCTCCTACCTAGGATTTAATATCCTACATGTACACTTGACACCCAAATGTTGTAGGATTATGTGAGTTGTCCCAGGATATCAAAAATTTTATGGTGACCACCTTCTAAGATGTCTTAAGATTGTTTTAAAGCTGAATATTGTAGGTTTTGTTGGTTGTCTCCCTAGATTATTCTGTGTGTACATAAGTGGGTTTAGACTCTCATAGATGTGAAGAAAAGGAAAAACATTGCAGTCCTTGTTTGTATACACTCTTAACACTTAAACCACCGCATTGCTGTGTTTTTGAGTTTCCTCCCCTTGTTATCTTTGCACTTTGCAGTCAAATTTGTTCCAGTATTTGGTTTCATTATTAATCATCTGATCATTTTAATTGTTCCCTGGATTTATTGGTGCAGAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCTATAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTGTCTGCTTCCGAGGTAACATAGTGCAATGTCTAGTGAATGGACTGACATCAAAAAAAAAAAAAAAAAGCTTGCAGTCCATCTTTGTCCAAAATGTAAAAAAAGGGATAAAGATGGAGGAAGTAGTTAGGTAGAAATGAAAATTTTTGGGATCTTATAAAATCTTTTCCTCAATGTTAAAATGTCAGCTACTTGACTAGAACTCCTCGTGAATAGGGTCCTGTTTGGTAATCATTTGGTTTTTGAAAATTAAGTCTATTTTCTTTCCATTTCTCATAATAGTTTTCATTTTTCTTAAATAAAAGGGTCGAAGTATCTACTAAATTTTAAAAACTATTTTTTTTCAGTTTTCCTAACTTGGCTTGGTTTTTGAAAACATCGATAGAAAGTAGATTAGATAGCAAGAAATTTTGATGGTGAAAGGGGGTATTCATAGGCTTACTTTTCATAAACTTACTCCCAAAAACCAAATGGTTACCGTGCCACATGAAACAAAATATTGAAACTCCAAAAAAAAAAAAAAAAACTTTGCCTTTTCTTGCAGGCTTTAGAGTTTGGGCTTATTGACGGCGTGCTGGAAACAGAATACTGAGCTTTTTGGCGAAGACTAAAAGGTCATAAGCCATATCTGCACAATAAGGTGATCTGATTATGCAGAATTTGACTTCTGAATGGGAAAATTTATTTCAGTGTGCGGAATCATCTTCTCCAAGCTTTGGTACAGAATATCAAAATTTCAGTCCGAATTAGCGTCGTTTCATTGGTGAACTCCCAAATTCTCTGAATCAATGCTCATGAGCTAGCAATTGAGAACACGATGAGATGATTCCTATATTCAATCTCATTCTTGTCAAAATTCTTGTTCTTGAAAAAACATGTATTCTTGAACTCTCACCTTGTCGGCTTCAACATTAAGAATTCATCCTGATAGCAACTTGAAAAATAGAGCACCGAAAGCAGGTTTGGAAGCTGTTCTCAAATTTTAGATAGATCGTTTTTTAAAGGTAGATAGCTTATCTATTTTGTCTCTAAACTTAGTTTAGAGCTGTATAATATAATAGTTATCTCAATTTTTAATTTTGTGTTTGCGTTGGATCTAGGTTTTCCATAATTTGAAATTTTTTAAAATTAATTGAATTATTTAATATG

mRNA sequence

CGATATTGTTGTAATTTCCATTAGTCTCTTTTGGTTTCACAGTGAAGCTCGATAACACAGCGCCATTCTCACAAGCTTCGCTCAAAATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCAGTTTCTCTGTCTCTTCGCACAATCGAACGTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCGATAGTATCTGCCTTGCCGAGGCCATATGGTGACCCTTCGACAATTGGATTATCGAGTAAAACAATGGGGGCACCTCTAAACCTTGACGATAAAGACTTTCTTCTCACCAGTACAAGTTATGGACCTATAGAGGCTAAGAAAGGTAATCCATCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCTATCGTGGCACAGCGAGTCATATCACAACTTGTGACTTTAGCAACAATTGACGAGGATGCAGATATCCTGGTGTATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGAGCTCTTCTCCTTGCAGGTGGAGAAAAGGGGATGCGCTATGCCATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCTATAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTGTCTGCTTCCGAGGCTTTAGAGTTTGGGCTTATTGACGGCGTGCTGGAAACAGAATACTGAGCTTTTTGGCGAAGACTAAAAGTGTGCGGAATCATCTTCTCCAAGCTTTGGTACAGAATATCAAAATTTCAGTCCGAATTAGCGTCGTTTCATTGGTGAACTCCCAAATTCTCTGAATCAATGCTCATGAGCTAGCAATTGAGAACACGATGAGATGATTCCTATATTCAATCTCATTCTTGTCAAAATTCTTGTTCTTGAAAAAACATGTATTCTTGAACTCTCACCTTGTCGGCTTCAACATTAAGAATTCATCCTGATAGCAACTTGAAAAATAGAGCACCGAAAGCAGGTTTGGAAGCTGTTCTCAAATTTTAGATAGATCGTTTTTTAAAGGTAGATAGCTTATCTATTTTGTCTCTAAACTTAGTTTAGAGCTGTATAATATAATAGTTATCTCAATTTTTAATTTTGTGTTTGCGTTGGATCTAGGTTTTCCATAATTTGAAATTTTTTAAAATTAATTGAATTATTTAATATG

Coding sequence (CDS)

ATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCAGTTTCTCTGTCTCTTCGCACAATCGAACGTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCGATAGTATCTGCCTTGCCGAGGCCATATGGTGACCCTTCGACAATTGGATTATCGAGTAAAACAATGGGGGCACCTCTAAACCTTGACGATAAAGACTTTCTTCTCACCAGTACAAGTTATGGACCTATAGAGGCTAAGAAAGGTAATCCATCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCTATCGTGGCACAGCGAGTCATATCACAACTTGTGACTTTAGCAACAATTGACGAGGATGCAGATATCCTGGTGTATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGAGCTCTTCTCCTTGCAGGTGGAGAAAAGGGGATGCGCTATGCCATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCTATAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTGTCTGCTTCCGAGGCTTTAGAGTTTGGGCTTATTGACGGCGTGCTGGAAACAGAATACTGA

Protein sequence

MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

Homology

[Close]

BLAST of Clc11G04890 vs. NCBI nr
Match: XP_038902836.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 515.0 bits (1325), Expect = 4.0e-142
Identity = 263/274 (95.99%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           M VASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGD STIGLSSKTMG P
Sbjct: 1   MAVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTMGEP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           L++DDKDFL TSTSYGPIEA+KGNP IMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV
Sbjct: 61  LHVDDKDFLHTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           PIEKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 PIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274

[Close]

BLAST of Clc11G04890 vs. NCBI nr
Match: XP_008457934.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 505.8 bits (1301), Expect = 2.4e-139
Identity = 261/274 (95.26%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           MVVAS FTASL+FSV+S NRTSSI QLSRR SHRSIVSALPRPYGD STIGLSSKT GAP
Sbjct: 1   MVVASPFTASLTFSVASLNRTSSIPQLSRRYSHRSIVSALPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLDDKDFLLTSTSYGPIEA+KGNP IMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNS V
Sbjct: 61  LNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSTV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
            IEKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 SIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274

[Close]

BLAST of Clc11G04890 vs. NCBI nr
Match: XP_022948075.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata])

HSP 1 Score: 494.2 bits (1271), Expect = 7.3e-136
Identity = 253/274 (92.34%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           MVVASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+GAP
Sbjct: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           P+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of Clc11G04890 vs. NCBI nr
Match: KAG6605088.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035095.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.9 bits (1265), Expect = 3.6e-135
Identity = 252/274 (91.97%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           MVVASAFTASL FSVSSHNR SS+ QLS RNS RSIVSA+PRPYGD STIGLSSKT+GAP
Sbjct: 1   MVVASAFTASLCFSVSSHNRASSVPQLSSRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           P+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of Clc11G04890 vs. NCBI nr
Match: XP_023534664.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.9 bits (1265), Expect = 3.6e-135
Identity = 251/274 (91.61%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           M VASAFTASLSFSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIG S KT+GAP
Sbjct: 1   MAVASAFTASLSFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGFSRKTVGAP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSAV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           P+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of Clc11G04890 vs. ExPASy Swiss-Prot
Match: Q9SAA2 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP6 PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.7e-109
Identity = 201/265 (75.85%), Postives = 229/265 (86.42%), Query Frame = 0


Query: 11  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFL 70
           LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K   
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNK--- 71

Query: 71  LTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLV 130
             +  +G IEAKKGNP +MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLV
Sbjct: 72  --APRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLV 131

Query: 131 TLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEK 190
           TLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEK
Sbjct: 132 TLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEK 191

Query: 191 GMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYT 250
           GMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYT
Sbjct: 192 GMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYT 251

Query: 251 ERDRFLSASEALEFGLIDGVLETEY 275
           ERDRFLSASEALEFGLIDG+LETEY
Sbjct: 252 ERDRFLSASEALEFGLIDGLLETEY 271

[Close]

BLAST of Clc11G04890 vs. ExPASy Swiss-Prot
Match: Q59993 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-43
Identity = 95/200 (47.50%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 77  PIEAKKGN--PSIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVT 136
           P+    GN   S++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ 
Sbjct: 11  PLSTLGGNNIQSVVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLF 70

Query: 137 LATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKG 196
           L   D + DI +Y+N PGGS Y+ LAIYD M  I+P V T+CFG+AAS GA LL+GG KG
Sbjct: 71  LDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKG 130

Query: 197 MRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTE 256
            R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TE
Sbjct: 131 KRMALPSSRIMIHQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTE 190

Query: 257 RDRFLSASEALEFGLIDGVL 271
           RD F+SA EA E+GLID V+
Sbjct: 191 RDFFMSAEEAKEYGLIDQVI 210

[Close]

BLAST of Clc11G04890 vs. ExPASy Swiss-Prot
Match: Q5P161 (ATP-dependent Clp protease proteolytic subunit OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=clpP PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.9e-42
Identity = 85/188 (45.21%), Postives = 124/188 (65.96%), Query Frame = 0


Query: 87  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILV 146
           ++P V+   G      D+ S L + R+IF+  PVN + A  +++QL+ L + + D D+  
Sbjct: 19  LVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLIVAQLLFLESENPDKDVYF 78

Query: 147 YLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMI 206
           Y+N PGGS  S +AIYD M +IKP V T+C G AAS G+ LLA GEKG R+ +PNSR+MI
Sbjct: 79  YINSPGGSVSSGMAIYDTMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNSRVMI 138

Query: 207 HQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALE 266
           HQP  G  G   D+     E +  R K++ M A  TGQPIE++++ T+RDRF+SA++A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAREILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAADAVE 198

Query: 267 FGLIDGVL 271
           +G++D VL
Sbjct: 199 YGIVDKVL 206

[Close]

BLAST of Clc11G04890 vs. ExPASy Swiss-Prot
Match: P54415 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-42
Identity = 88/189 (46.56%), Postives = 125/189 (66.14%), Query Frame = 0


Query: 87  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILV 146
           ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +
Sbjct: 1   MIPIVVEESGRGERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYL 60

Query: 147 YLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMI 206
           Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA LLA G KG R ++ +SRIMI
Sbjct: 61  YINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMI 120

Query: 207 HQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALE 266
           HQP  G  G  +D+  Q NE +  +  ++ + A  TGQP+ +++  T+RD F+SASEA+E
Sbjct: 121 HQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVE 180

Query: 267 FGLIDGVLE 272
           +GLID V++
Sbjct: 181 YGLIDRVID 189

[Close]

BLAST of Clc11G04890 vs. ExPASy Swiss-Prot
Match: Q5N665 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-42
Identity = 88/189 (46.56%), Postives = 125/189 (66.14%), Query Frame = 0


Query: 87  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILV 146
           ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +
Sbjct: 1   MIPIVVEESGRGERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYL 60

Query: 147 YLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMI 206
           Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA LLA G KG R ++ +SRIMI
Sbjct: 61  YINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMI 120

Query: 207 HQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALE 266
           HQP  G  G  +D+  Q NE +  +  ++ + A  TGQP+ +++  T+RD F+SASEA+E
Sbjct: 121 HQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVE 180

Query: 267 FGLIDGVLE 272
           +GLID V++
Sbjct: 181 YGLIDRVID 189

[Close]

BLAST of Clc11G04890 vs. ExPASy TrEMBL
Match: A0A1S3C7Y1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103497498 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 261/274 (95.26%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           MVVAS FTASL+FSV+S NRTSSI QLSRR SHRSIVSALPRPYGD STIGLSSKT GAP
Sbjct: 1   MVVASPFTASLTFSVASLNRTSSIPQLSRRYSHRSIVSALPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLDDKDFLLTSTSYGPIEA+KGNP IMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNS V
Sbjct: 61  LNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSTV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
            IEKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 SIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274

[Close]

BLAST of Clc11G04890 vs. ExPASy TrEMBL
Match: A0A6J1G8P9 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111451769 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.5e-136
Identity = 253/274 (92.34%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           MVVASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+GAP
Sbjct: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           P+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of Clc11G04890 vs. ExPASy TrEMBL
Match: A0A6J1KXP8 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111499710 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 251/274 (91.61%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           M VASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+G P
Sbjct: 1   MAVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGTP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSAV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           P+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of Clc11G04890 vs. ExPASy TrEMBL
Match: A0A6J1D5M0 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111017253 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 250/273 (91.58%), Postives = 260/273 (95.24%), Query Frame = 0


Query: 2   VVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPL 61
           + ASAFTASL+FSVSS+NRTSSI  LSRRNS RS+VS LPRPYGD STIGLSSK++ APL
Sbjct: 1   MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSTLPRPYGDSSTIGLSSKSIRAPL 60

Query: 62  NLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVA 121
           +LDDKDFL  STSY PIEAKKGNP IMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVA
Sbjct: 61  SLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 181
           QRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 241
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQP 240

Query: 242 IEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           +EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of Clc11G04890 vs. ExPASy TrEMBL
Match: A0A0A0LLX4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_2G245460 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.5e-131
Identity = 242/274 (88.32%), Postives = 256/274 (93.43%), Query Frame = 0


Query: 1   MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAP 60
           MVVAS FTASLSFSV+S+NR SSISQLSRRNSHRSIVSA PRPYGD STIGLSSKT GAP
Sbjct: 1   MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120
           LNLDDKDFL TSTSY PI A++ NP +MPAVMTPGGPLDLSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ 240

Query: 241 PIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
            IE +QQY +RDRFLS SEAL+FGLIDGVLETEY
Sbjct: 241 SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 274

[Close]

BLAST of Clc11G04890 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-110
Identity = 201/265 (75.85%), Postives = 229/265 (86.42%), Query Frame = 0


Query: 11  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFL 70
           LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K   
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNK--- 71

Query: 71  LTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLV 130
             +  +G IEAKKGNP +MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLV
Sbjct: 72  --APRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLV 131

Query: 131 TLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEK 190
           TLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEK
Sbjct: 132 TLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEK 191

Query: 191 GMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYT 250
           GMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYT
Sbjct: 192 GMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYT 251

Query: 251 ERDRFLSASEALEFGLIDGVLETEY 275
           ERDRFLSASEALEFGLIDG+LETEY
Sbjct: 252 ERDRFLSASEALEFGLIDGLLETEY 271

[Close]

BLAST of Clc11G04890 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 395.6 bits (1015), Expect = 3.3e-110
Identity = 205/278 (73.74%), Postives = 233/278 (83.81%), Query Frame = 0


Query: 11  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDK--- 70
           LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K   
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNKAPS 71

Query: 71  -------DFLLTSTSY---GPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPV 130
                  + L +ST Y   G IEAKKGNP +MP+VMTPGGPLDLSSVLFRNRIIFIGQP+
Sbjct: 72  SLPLPILNILKSSTVYFIFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPI 131

Query: 131 NSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVA 190
           N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVA
Sbjct: 132 NAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVA 191

Query: 191 ASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAA 250
           ASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAA
Sbjct: 192 ASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAA 251

Query: 251 FTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY 275
           FTGQP+EKVQQYTERDRFLSASEALEFGLIDG+LETEY
Sbjct: 252 FTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETEY 289

[Close]

BLAST of Clc11G04890 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 159.1 bits (401), Expect = 5.2e-39
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 0


Query: 67  DFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVIS 126
           D  + S+ Y P  A+   P  M           + S LF+ RII  G  V+  +A  +++
Sbjct: 86  DLQVPSSPYFPAYAQGQGPPPMVQERFQ----SIISQLFQYRIIRCGGAVDDDMANIIVA 145

Query: 127 QLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAG 186
           QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P V TVC G+AAS GA LL+ 
Sbjct: 146 QLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA 205

Query: 187 GEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQ 246
           G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ +EK+ 
Sbjct: 206 GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKIN 265

Query: 247 QYTERDRFLSASEALEFGLIDGVL 271
           Q T+RD F+SA EA E+GLIDGV+
Sbjct: 266 QDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of Clc11G04890 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 158.7 bits (400), Expect = 6.7e-39
Identity = 80/194 (41.24%), Postives = 122/194 (62.89%), Query Frame = 0


Query: 78  IEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDED 137
           I++   +PS +P+       LD +++L R RI+F+G  V+ + A  VISQL+ L   D +
Sbjct: 68  IDSVAQSPSRLPSF----EELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSE 127

Query: 138 ADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN 197
            DI +++N PGGS  + + IYD M   K  V TVC G+AAS GA LLA G KG RY MPN
Sbjct: 128 RDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPN 187

Query: 198 SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSA 257
           S++MIHQP    GG   ++  ++ E +  + K++ +++  TG+P  +++  T+RD FL+ 
Sbjct: 188 SKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNP 247

Query: 258 SEALEFGLIDGVLE 272
            EA E+GLID V++
Sbjct: 248 WEAKEYGLIDAVID 257

[Close]

BLAST of Clc11G04890 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-35
Identity = 92/261 (35.25%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 12  SFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLS-SKTMGAPLNLDDKDFLL 71
           + S+SS  + S +S  SR NS  S  S+    +  P+ + L  +K +  PL       L 
Sbjct: 3   TLSLSSSLKPSLVS--SRLNSSSSASSS---SFPKPNNLYLKPTKLISPPLRTTSPSPLR 62

Query: 72  TSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVT 131
            + +   IE  +   S +      G   D+  +L R RI+F+G  ++  VA  ++SQL+ 
Sbjct: 63  FANA--SIEMSQTQESAI-----RGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLL 122

Query: 132 LATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKG 191
           L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG
Sbjct: 123 LDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKG 182

Query: 192 MRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTE 251
            R+AMPN+RIMIHQP  G  G   DV  Q  E + +++ V  + A  T +  E+V +  +
Sbjct: 183 KRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDID 242

Query: 252 RDRFLSASEALEFGLIDGVLE 272
           RDR++S  EA+E+GLIDGV++
Sbjct: 243 RDRYMSPIEAVEYGLIDGVID 251

The following BLAST results are available for this feature:

BLAST of Clc11G04890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902836.1	4.0e-142	95.99	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Beni...	[more]
XP_008457934.1	2.4e-139	95.26	PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isofo...	[more]
XP_022948075.1	7.3e-136	92.34	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita mosch...	[more]
KAG6605088.1	3.6e-135	91.97	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurb...	[more]
XP_023534664.1	3.6e-135	91.61	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita pepo ...	[more]

BLAST of Clc11G04890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAA2	2.7e-109	75.85	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis t...	[more]
Q59993	1.2e-43	47.50	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PC...	[more]
Q5P161	2.9e-42	45.21	ATP-dependent Clp protease proteolytic subunit OS=Aromatoleum aromaticum (strain...	[more]
P54415	4.9e-42	46.56	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (str...	[more]
Q5N665	4.9e-42	46.56	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain AT...	[more]

BLAST of Clc11G04890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7Y1	1.2e-139	95.26	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1G8P9	3.5e-136	92.34	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KXP8	1.7e-135	91.61	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1D5M0	1.1e-134	91.58	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0LLX4	4.5e-131	88.32	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of Clc11G04890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11750.1	1.9e-110	75.85	CLP protease proteolytic subunit 6	[more]
AT1G11750.2	3.3e-110	73.74	CLP protease proteolytic subunit 6	[more]
AT1G02560.1	5.2e-39	43.63	nuclear encoded CLP protease 5	[more]
AT1G66670.1	6.7e-39	41.24	CLP protease proteolytic subunit 3	[more]
AT5G45390.1	1.6e-35	35.25	CLP protease P4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 170..187 score: 62.5 coord: 248..267 score: 57.75 coord: 99..114 score: 47.19 coord: 139..159 score: 51.9 coord: 191..210 score: 55.75
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 87..273 score: 33.305546
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 99..269 e-value: 4.80011E-86 score: 252.362
None	No IPR available	GENE3D	3.90.226.10		coord: 79..274 e-value: 1.6E-61 score: 209.4
None	No IPR available	PANTHER	PTHR10381:SF8	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC	coord: 12..274
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 99..272 e-value: 1.0E-65 score: 221.0
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 12..274
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 192..205
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 98..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G04890.1	Clc11G04890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity