Clc11G04450 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G04450
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	late embryogenesis abundant protein-like
Location	ClcChr11: 4234979 .. 4237446 (-)
RNA-Seq Expression	Clc11G04450
Synteny	Clc11G04450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATGTACGTGATGAGCATGGAAACCCGGTTCAACTGACCGACGAACGTGGGAATCCGGTTCAGTTGACCGACGAATTTGGCAACCCCATGCACCTGACCGGAGTCGTCGCCACCACACCCTCCAAGCTTGACACCACCACCACCATACCTTCCAAGCTCGACTCCACCACCACCACCACAACACCCTCCAAGCTCGACTCTGCCACCACCACCACCCCCGGTAAGGATGATGTCGCCCAGACGCAGCTCACTCGAGAAGCCCATGATGGCTCACCGCGTCGTTCTAGCAGCTCCAGCTCTAGCTCTGTGAGTAATTTGTGTTAAGAAGATTGTGAATTAAGAGTCGTTTTTGCTGTTTCTAATTTTCTCTCTATCCAAGTTTGCAAATTCTTTCATTAAAATTAGATTATGAGTTTTAGCAGATATTCTAAAATTGTTTAAATTATTTTTATTATGTTTGAAATTACTCTAAATTTCAATTAATTTAATAGTTAATTTTACATGCAATTTTTATATCATCAAATTGGTTTGAATGATTAAAAATAAAACGATTTTGGAAATGACAAAAAAAAATTTAACCATTTCAGAATTACCCATGTCCTTAATTTGGTTGTTTAATGCATTCCCTATAAGAGGTGTACTTTCAATTTTTGGATCTCATAGATTGAACTTTAAAATATAATTTCCAATTTTTAAGTTTTCTTGGGTAACTATTTCCATTTTTTTCCTCAATTTTTTTGCCTAGTTTGCATCTACTTTAAGTGAATTCTAGTTAGCCAAGTTCTAAAAACAAAAACATAAACGTGTATTTATTAAAAAAAATAAAATAAAGTTTTCAAAATTTGGCTTTTTTTTAAACATTAAACACATAAAAAAAAATGTTACCAAACGGGTTTGAATTTTTAATTTTGTGGTGGATAGGTTTACGAATCTTCATTCTATAAAATTCGAGTGCCTGTTAGGCACAAAACTGAACATTAGAGTACATTATTTATCATACAAAATTAAATTTTGTATCAAATAGATGAATTGAGTCTACCATAAGGTTTTTTTTTTTTAAATATCTATAGGACACTCACTGTTGAAGAAACTTGATAACCATTTGGTTTTTATTTTTATTTTTCTTTTAAATTAAGCTTCATTTCTAAATTTCTTATTTTGTTTTCAACTTTGTCTGAACTTGTTTTCATGATGGGAGCTCAAGTCTTTGGTCTTTTTTTTTCTTTTTTTCTTTTTTTTAAAAAAAAAGTCAAGTAGAGACTACTTGTACTCCCAATTTCTTTTTTTTGGTTATCTACTTTTTATCGATGGATAAAAAATAAAGTCAATATTTGAAAGTTAAAAAAATTAATTTTAAAAAATTGTTTTGTTTTTAGAATTTGACTAACAATTCATTACTCAAGGAAAATATCCAAATCATTATAAGAAATGGAGAGAAAATTGGTTTAATTTTTTAAAAATTAAAAAACAAAAAATAGACAAAATCGTTACTAAACGAGTCCAAAAATTTTGTCCATTTAAGAACTTTTTGATAAATTTTTTCTTATTTACTTTTTGAAAATTTGAGCCCTCCTTTCACCCATTTCTTTTTGTTATCGATCTTTATTAAGCTTTTAAAAAATTGAGCTAAGTTTTAAAATGTTCTTAAAAAATAGTTTTTTAAAAACTTTTTTTTTTTTCTAAATTCAGCTAAAAATCTAATTCAGAGAAAGATGAAAATTCTTTTAAAAAAAATTAAGAGGAAATAATTTTATTTTAAATAGGCTACTTTGATAAATATAATTTGATCTTTTGTTTTATGTTTTTGCAAATTAGGTTTATTTTTAGACAATGGAGTTGTTAAACCTATATTTGTCATATTCAAAATGTATTTGTTGGTTTAAAATTAATTTAATATTTTATTTTAATATTTGGATGTAATTTTCAGTTCATCAAAATTGAGATTTGGAATAATTAAAAAATTATTTGATTTTTTAGTTCTACAACAAAAAATTGAATACTAGTGTTGTAAGTTTCCAAATTTTGGCTTTTGATTACTATTTTTGTGGCTTTTGATTTTGAAACTTCTCCTAAAATATTAACAACAATATAAATCTATATTTATAAGTTAAATTATTTCTTTTTTTTTTTTTTTTTGTTATATTTTAACAATTAGACCTAATTTTCAATTCACAATATTTGATGATATGATTGGGCAGTCGGAGGATGACGGGCAAGGCGGGAGGAGGAGGAAGAAGAAGGGGTTGACACAGAAGATAAAGGAGAAGTTAACAGGAAGCGGAAAACACAAAGAGGCGAGCACGACGGGGGTAGAGCACCACCATAGCACCACCGTGACGACGTCGGTCGACGTCGAACATCAAGAACATGGGAAGAAGGGGGTTATGGAGAAGATCAAAGAGAAATTGCCTGGCCATCACAACCATTAAACCTCAAATTTTCTACTCTCCAATAATTCTCAT

mRNA sequence

ATGGCTAATGTACGTGATGAGCATGGAAACCCGGTTCAACTGACCGACGAACGTGGGAATCCGGTTCAGTTGACCGACGAATTTGGCAACCCCATGCACCTGACCGGAGTCGTCGCCACCACACCCTCCAAGCTTGACACCACCACCACCATACCTTCCAAGCTCGACTCCACCACCACCACCACAACACCCTCCAAGCTCGACTCTGCCACCACCACCACCCCCGGTAAGGATGATGTCGCCCAGACGCAGCTCACTCGAGAAGCCCATGATGGCTCACCGCGTCGTTCTAGCAGCTCCAGCTCTAGCTCTTCGGAGGATGACGGGCAAGGCGGGAGGAGGAGGAAGAAGAAGGGGTTGACACAGAAGATAAAGGAGAAGTTAACAGGAAGCGGAAAACACAAAGAGGCGAGCACGACGGGGGTAGAGCACCACCATAGCACCACCGTGACGACGTCGGTCGACGTCGAACATCAAGAACATGGGAAGAAGGGGGTTATGGAGAAGATCAAAGAGAAATTGCCTGGCCATCACAACCATTAAACCTCAAATTTTCTACTCTCCAATAATTCTCAT

Coding sequence (CDS)

ATGGCTAATGTACGTGATGAGCATGGAAACCCGGTTCAACTGACCGACGAACGTGGGAATCCGGTTCAGTTGACCGACGAATTTGGCAACCCCATGCACCTGACCGGAGTCGTCGCCACCACACCCTCCAAGCTTGACACCACCACCACCATACCTTCCAAGCTCGACTCCACCACCACCACCACAACACCCTCCAAGCTCGACTCTGCCACCACCACCACCCCCGGTAAGGATGATGTCGCCCAGACGCAGCTCACTCGAGAAGCCCATGATGGCTCACCGCGTCGTTCTAGCAGCTCCAGCTCTAGCTCTTCGGAGGATGACGGGCAAGGCGGGAGGAGGAGGAAGAAGAAGGGGTTGACACAGAAGATAAAGGAGAAGTTAACAGGAAGCGGAAAACACAAAGAGGCGAGCACGACGGGGGTAGAGCACCACCATAGCACCACCGTGACGACGTCGGTCGACGTCGAACATCAAGAACATGGGAAGAAGGGGGTTATGGAGAAGATCAAAGAGAAATTGCCTGGCCATCACAACCATTAA

Protein sequence

MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTTTTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHNH

Homology

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BLAST of Clc11G04450 vs. NCBI nr
Match: XP_038902144.1 (late embryogenesis abundant protein-like isoform X2 [Benincasa hispida])

HSP 1 Score: 252.3 bits (643), Expect = 3.2e-63
Identity = 144/179 (80.45%), Postives = 148/179 (82.68%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVAT+PSKLD              
Sbjct: 83  MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATSPSKLD-------------- 142

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120
                    +TTTTP  DDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGG RRKKKGL
Sbjct: 143 ---------STTTTPAGDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGG-RRKKKGL 202

Query: 121 TQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           TQKIKEKLTGSGKHKEA TTG EHH STTVTTS  VEHQEHGKKGVMEKIKE+LPGHH+
Sbjct: 203 TQKIKEKLTGSGKHKEAGTTGAEHHQSTTVTTST-VEHQEHGKKGVMEKIKERLPGHHH 236

[Close]

BLAST of Clc11G04450 vs. NCBI nr
Match: XP_038902143.1 (embryogenic cell protein 40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-61
Identity = 145/179 (81.01%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVAT+PSKLD+TTT P        
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATSPSKLDSTTTTP-------- 60

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120
             + + LD         DDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGG RRKKKGL
Sbjct: 61  -VSYTHLD--VYKRQAGDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGG-RRKKKGL 120

Query: 121 TQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           TQKIKEKLTGSGKHKEA TTG EHH STTVTTS  VEHQEHGKKGVMEKIKE+LPGHH+
Sbjct: 121 TQKIKEKLTGSGKHKEAGTTGAEHHQSTTVTTST-VEHQEHGKKGVMEKIKERLPGHHH 166

[Close]

BLAST of Clc11G04450 vs. NCBI nr
Match: XP_004150075.1 (embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein Csa_006233 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-54
Identity = 136/179 (75.98%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVV TTPS L  T   PS L  T  
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTP--PSNLHPTAV 60

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120
           TTT              ++VAQTQ  RE HD SPRRSSSSSSSSSEDDGQGGRRRKKKGL
Sbjct: 61  TTT-------------GENVAQTQPPREIHDASPRRSSSSSSSSSEDDGQGGRRRKKKGL 120

Query: 121 TQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           TQKIKEKLTGSGKHKEA TTG EHH STT TT+  VEH E GKKGVMEKIKEKLPGHH+
Sbjct: 121 TQKIKEKLTGSGKHKEAGTTG-EHHESTT-TTTTSVEHHEPGKKGVMEKIKEKLPGHHH 162

[Close]

BLAST of Clc11G04450 vs. NCBI nr
Match: XP_008460975.1 (PREDICTED: late embryogenesis abundant protein-like [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 3.9e-53
Identity = 132/179 (73.74%), Postives = 136/179 (75.98%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVV TTPSKLD T   PS L  TT 
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLDPTAP-PSNLGPTTI 60

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120
                            ++VAQTQ  REAHD SPRRSSSSSSSSSEDDGQGGRRRKKKGL
Sbjct: 61  ----------------GENVAQTQPPREAHDTSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120

Query: 121 TQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           TQKIKEKLTGSGKHKE  T    H  + T TT   VEHQE GKKGVMEKIKEKLPGHH+
Sbjct: 121 TQKIKEKLTGSGKHKEGGT----HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPGHHH 158

[Close]

BLAST of Clc11G04450 vs. NCBI nr
Match: XP_022986610.1 (late embryogenesis abundant protein-like [Cucurbita maxima])

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-44
Identity = 128/211 (60.66%), Postives = 140/211 (66.35%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVAT-------------------T 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T                    
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  PSKLDTTTTIP------------SKLDSTTTTTTPSKLDSATTTTPGKDDVAQTQLTREA 120
           P+ + TT + P            + +  T   TT SK       + G D V +TQ  RE 
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSK-----PVSSGGDVVGRTQPLREG 120

Query: 121 HDGSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEA--STTGVEHHHS 179
           HD S  RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT  GKHKEA  +TTG  HH S
Sbjct: 121 HDASLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQS 180

[Close]

BLAST of Clc11G04450 vs. ExPASy Swiss-Prot
Match: P21298 (Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 93/186 (50.00%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MA+++DE GNP+ LTD  GNPVQL+DEFGNPMH+TGV ++ P   D+ T   ++  +   
Sbjct: 1   MADLKDERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSAPQYKDSVTGNIAEYPTEAP 60

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGS----PRRSSSSSSSSSEDDGQGGRRRK 120
               +    A  TT      ++T  T + H GS     RRS SSSSSSSEDDGQGGRR  
Sbjct: 61  PAGVAAGTGAAATTAAGVTTSET-TTGQEHHGSLGEHLRRSGSSSSSSSEDDGQGGRR-- 120

Query: 121 KKGLTQKIKEKLTGSGKHK--EASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKL 180
           KK +  KIK+KL G GKHK  +  TT      +TT TT+     Q H KKG++EKIKEKL
Sbjct: 121 KKSIKDKIKDKL-GGGKHKDEQTPTTATTTGPTTTTTTTGAAADQHHEKKGILEKIKEKL 180

[Close]

BLAST of Clc11G04450 vs. ExPASy Swiss-Prot
Match: Q96261 (Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28
Identity = 96/191 (50.26%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNP-VQLTDEFGNPMHLTGVVATTPSKLDTTTT-----IPSK 60
           MA++RDE GNP+ LTD +GNP V LTDE GNPM+LTGVV++TP   ++TT+       S 
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 61  LDSTTTTTTPSKLDSAT-TTTPGKDDVAQTQLTREAHDGS----PRRSSSSSSSSSEDDG 120
           +  T     P+   +AT  T  G         T + H GS     RRS SSSSSSSEDDG
Sbjct: 61  VGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSSEDDG 120

Query: 121 QGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEK 180
           QGGRR  KK + +KIKEK  GSGKHK+  T       +T  TT      Q H KKG++EK
Sbjct: 121 QGGRR--KKSIKEKIKEKF-GSGKHKDEQTP------ATATTTGPATTDQPHEKKGILEK 180

[Close]

BLAST of Clc11G04450 vs. ExPASy Swiss-Prot
Match: Q07322 (Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.8e-14
Identity = 94/305 (30.82%), Postives = 119/305 (39.02%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSK---------------- 60
           MA++RDE GNP+QLTD+ GNPVQLTDE+GNP+H+TGV  T  +                 
Sbjct: 1   MADLRDEKGNPIQLTDQHGNPVQLTDEYGNPVHITGVATTGATTGHHDHGVGGASHGGVG 60

Query: 61  ----------------------------------------------LDTTTTIPSKLDST 120
                                                           TTT + +   +T
Sbjct: 61  STGLGGVAGAAGLAGATAAAATHGGSHGGTGTHGVGPTGVGAAHGGTGTTTGLGTGTGTT 120

Query: 121 TTT------------------------------------------------TTPSKLDSA 180
             T                                                T  S L S+
Sbjct: 121 GQTHGMGPTGIGGTHGVGSTGIGGAHGGTGVLGQTHGMGPTGTGAAHGGLGTGQSGLGSS 180

[Close]

BLAST of Clc11G04450 vs. ExPASy Swiss-Prot
Match: P25863 (Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 51/88 (57.95%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 92  GSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVT 151
           G   RS SSSSSSSEDDG GGRRRKKKG+T+KIKEKL G     + S+ G       + T
Sbjct: 48  GMLHRSGSSSSSSSEDDGLGGRRRKKKGITEKIKEKLPGHHDSNKTSSLG-------STT 107

Query: 152 TSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           T+ D     H KKG+MEKIKEKLPG H+
Sbjct: 108 TAYDTGTVHHEKKGMMEKIKEKLPGGHH 128

[Close]

BLAST of Clc11G04450 vs. ExPASy Swiss-Prot
Match: P30287 (Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 96  RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVD 155
           +SSSSSSSSSEDDGQGG RRKKK + +KIKEKL GS K +E    G     + T T +  
Sbjct: 145 KSSSSSSSSSEDDGQGG-RRKKKSIKEKIKEKLPGSHKQEEQKQAGHTAPAAGTGTGTGT 204

Query: 156 VEHQEHGKKGVMEKIKEKLPGHHNH 181
               +H KKG++EKIKEKLPGH +H
Sbjct: 205 HAAGKHEKKGIVEKIKEKLPGHGHH 228

[Close]

BLAST of Clc11G04450 vs. ExPASy TrEMBL
Match: A0A0A0LPB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 9.9e-55
Identity = 136/179 (75.98%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVV TTPS L  T   PS L  T  
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTP--PSNLHPTAV 60

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120
           TTT              ++VAQTQ  RE HD SPRRSSSSSSSSSEDDGQGGRRRKKKGL
Sbjct: 61  TTT-------------GENVAQTQPPREIHDASPRRSSSSSSSSSEDDGQGGRRRKKKGL 120

Query: 121 TQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           TQKIKEKLTGSGKHKEA TTG EHH STT TT+  VEH E GKKGVMEKIKEKLPGHH+
Sbjct: 121 TQKIKEKLTGSGKHKEAGTTG-EHHESTT-TTTTSVEHHEPGKKGVMEKIKEKLPGHHH 162

[Close]

BLAST of Clc11G04450 vs. ExPASy TrEMBL
Match: A0A1S3CDP4 (late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.9e-53
Identity = 132/179 (73.74%), Postives = 136/179 (75.98%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVV TTPSKLD T   PS L  TT 
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLDPTAP-PSNLGPTTI 60

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120
                            ++VAQTQ  REAHD SPRRSSSSSSSSSEDDGQGGRRRKKKGL
Sbjct: 61  ----------------GENVAQTQPPREAHDTSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120

Query: 121 TQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           TQKIKEKLTGSGKHKE  T    H  + T TT   VEHQE GKKGVMEKIKEKLPGHH+
Sbjct: 121 TQKIKEKLTGSGKHKEGGT----HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPGHHH 158

[Close]

BLAST of Clc11G04450 vs. ExPASy TrEMBL
Match: A0A6J1JEI1 (late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484299 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 9.3e-45
Identity = 128/211 (60.66%), Postives = 140/211 (66.35%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVAT-------------------T 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T                    
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  PSKLDTTTTIP------------SKLDSTTTTTTPSKLDSATTTTPGKDDVAQTQLTREA 120
           P+ + TT + P            + +  T   TT SK       + G D V +TQ  RE 
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSK-----PVSSGGDVVGRTQPLREG 120

Query: 121 HDGSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEA--STTGVEHHHS 179
           HD S  RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT  GKHKEA  +TTG  HH S
Sbjct: 121 HDASLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQS 180

[Close]

BLAST of Clc11G04450 vs. ExPASy TrEMBL
Match: A0A6J1FTT6 (late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448732 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 6.0e-44
Identity = 127/213 (59.62%), Postives = 139/213 (65.26%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVAT-------------------T 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T                    
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60

Query: 61  PSKLDTTTTIP------------SKLDSTTTTTTPSKLDSATTTTPGKDDVAQTQLTREA 120
           P+ + TT   P            + +  T   TT SK       + G D V +TQ  RE 
Sbjct: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSK-----PVSSGGDVVGRTQPLREG 120

Query: 121 HDGSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEA----STTGVEHH 179
           HD S  RSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLT  GKHKEA    +TTG  HH
Sbjct: 121 HDASLARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLT--GKHKEAGTTTTTTGAGHH 180

[Close]

BLAST of Clc11G04450 vs. ExPASy TrEMBL
Match: A0A5D3DZ78 (Late embryogenesis abundant protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00160 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.1e-40
Identity = 114/179 (63.69%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDSTTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVV TTPSKLD T   PS L  TT 
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLDPTAP-PSNLGPTTI 60

Query: 61  TTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKGL 120
                            ++VAQTQ  REAHD SPRRSSSSSSSS                
Sbjct: 61  ----------------GENVAQTQPPREAHDTSPRRSSSSSSSS---------------- 120

Query: 121 TQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
             KIKEKLTGSGKHKE  T    H  + T TT   VEHQE GKKGVMEKIKEKLPGHH+
Sbjct: 121 --KIKEKLTGSGKHKEGGT----HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPGHHH 140

[Close]

BLAST of Clc11G04450 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 127.9 bits (320), Expect = 8.4e-30
Identity = 96/191 (50.26%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNP-VQLTDEFGNPMHLTGVVATTPSKLDTTTT-----IPSK 60
           MA++RDE GNP+ LTD +GNP V LTDE GNPM+LTGVV++TP   ++TT+       S 
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 61  LDSTTTTTTPSKLDSAT-TTTPGKDDVAQTQLTREAHDGS----PRRSSSSSSSSSEDDG 120
           +  T     P+   +AT  T  G         T + H GS     RRS SSSSSSSEDDG
Sbjct: 61  VGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSSEDDG 120

Query: 121 QGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEK 180
           QGGRR  KK + +KIKEK  GSGKHK+  T       +T  TT      Q H KKG++EK
Sbjct: 121 QGGRR--KKSIKEKIKEKF-GSGKHKDEQTP------ATATTTGPATTDQPHEKKGILEK 180

[Close]

BLAST of Clc11G04450 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 51/88 (57.95%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 92  GSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVT 151
           G   RS SSSSSSSEDDG GGRRRKKKG+T+KIKEKL G     + S+ G       + T
Sbjct: 48  GMLHRSGSSSSSSSEDDGLGGRRRKKKGITEKIKEKLPGHHDSNKTSSLG-------STT 107

Query: 152 TSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           T+ D     H KKG+MEKIKEKLPG H+
Sbjct: 108 TAYDTGTVHHEKKGMMEKIKEKLPGGHH 128

[Close]

BLAST of Clc11G04450 vs. TAIR 10
Match: AT4G39130.1 (Dehydrin family protein )

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-13
Identity = 68/180 (37.78%), Postives = 89/180 (49.44%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATTPSKLDTTTTIPSKLDS-TT 60
           MA+++DE GNP+ LTD  G P QL DEFGN MHLTGV  T P   +++ T P  + +  T
Sbjct: 1   MADLKDERGNPIYLTDAHGEPAQLMDEFGNAMHLTGVATTVPHLKESSYTGPHPITAPVT 60

Query: 61  TTTTPSKLDSATTTTPGKDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRRKKKG 120
           TT TP      + +     D          HD          +SS+E++G+G  R  K  
Sbjct: 61  TTNTPHHAQPISVSHDPLQD----------HD-----LRWFGTSSTEENGEGVGR--KTN 120

Query: 121 LTQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVMEKIKEKLPGHHN 180
           +T + K KL            GV+   + TVT S       H KKG  +KIKEKL GHHN
Sbjct: 121 ITDETKSKL------------GVDKPSAATVTGS--GSGSVHEKKGFFKKIKEKLSGHHN 149

[Close]

BLAST of Clc11G04450 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 73/190 (38.42%), Postives = 89/190 (46.84%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLT-DEFGNPM----HLTGVVATTPSKLDTTTTIPSKL 60
           MA+ ++  G   Q TDE GNP+Q   DE+GNPM    + TG            T      
Sbjct: 1   MASYQNRPGG--QATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYG 60

Query: 61  DSTTTTTTPSKLDSATTTTP------GKDDVAQTQLTREAH---DGSPRRSSSSSSSSSE 120
                  T  +     T T       G     Q QL +E+     G   RS S SSSSSE
Sbjct: 61  SGGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSSE 120

Query: 121 DDGQGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGV 177
           DDGQGGRR  KKG+TQKIKEKL G   H + S          +   +     + H KKG+
Sbjct: 121 DDGQGGRR--KKGITQKIKEKLPG---HHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGM 180

[Close]

BLAST of Clc11G04450 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.3e-05
Identity = 70/189 (37.04%), Postives = 86/189 (45.50%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLT-DEFGNPM----HLTGVVATTPSKLDTTTTIPSKL 60
           MA+ ++  G   Q TDE GNP+Q   DE+GNPM    + TG            T      
Sbjct: 1   MASYQNRPGG--QATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYG 60

Query: 61  DSTTTTTTPSKLDSATTTTP------GKDDVAQTQLTREAHD--GSPRRSSSSSSSSSED 120
                  T  +     T T       G     Q QL +E+    G     S S SSSS D
Sbjct: 61  SGGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSSD 120

Query: 121 DGQGGRRRKKKGLTQKIKEKLTGSGKHKEASTTGVEHHHSTTVTTSVDVEHQEHGKKGVM 177
           DGQGGRR  KKG+TQKIKEKL G   H + S          +   +     + H KKG+M
Sbjct: 121 DGQGGRR--KKGITQKIKEKLPG---HHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMM 180

The following BLAST results are available for this feature:

BLAST of Clc11G04450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902144.1	3.2e-63	80.45	late embryogenesis abundant protein-like isoform X2 [Benincasa hispida]	[more]
XP_038902143.1	1.3e-61	81.01	embryogenic cell protein 40-like isoform X1 [Benincasa hispida]	[more]
XP_004150075.1	2.1e-54	75.98	embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein C...	[more]
XP_008460975.1	3.9e-53	73.74	PREDICTED: late embryogenesis abundant protein-like [Cucumis melo]	[more]
XP_022986610.1	1.9e-44	60.66	late embryogenesis abundant protein-like [Cucurbita maxima]	[more]

BLAST of Clc11G04450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P21298	1.1e-29	50.00	Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1	[more]
Q96261	1.2e-28	50.26	Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1	[more]
Q07322	4.8e-14	30.82	Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1	[more]
P25863	1.8e-13	57.95	Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2	[more]
P30287	1.3e-11	57.65	Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2	[more]

BLAST of Clc11G04450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPB7	9.9e-55	75.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1	[more]
A0A1S3CDP4	1.9e-53	73.74	late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700...	[more]
A0A6J1JEI1	9.3e-45	60.66	late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FTT6	6.0e-44	59.62	late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3DZ78	1.1e-40	63.69	Late embryogenesis abundant protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Clc11G04450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21490.1	8.4e-30	50.26	dehydrin LEA	[more]
AT3G50980.1	1.3e-14	57.95	dehydrin xero 1	[more]
AT4G39130.1	7.1e-13	37.78	Dehydrin family protein	[more]
AT5G66400.1	2.2e-06	38.42	Dehydrin family protein	[more]
AT5G66400.2	9.3e-05	37.04	Dehydrin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 22..178 e-value: 1.6E-39 score: 136.0
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 1..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..180
None	No IPR available	PANTHER	PTHR33346:SF5	DEHYDRIN XERO 2-RELATED	coord: 1..180
IPR030513	Dehydrin, conserved site	PROSITE	PS00315	DEHYDRIN_1	coord: 101..118
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 169..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G04450.1	Clc11G04450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009415	response to water