Clc11G04330 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G04330
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	B-box zinc finger family protein
Location	ClcChr11: 4126696 .. 4127481 (-)
RNA-Seq Expression	Clc11G04330
Synteny	Clc11G04330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGAGGAAAACTGAAAAGAAAGAAGAAAGAAGAAAAGAAGAAAATGAAGATCCGTTGTGATGTTTGCGAGAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCGGCCCTCTGTGCCGCCTGTGACCGCCACGTCCACCGCGCCAACAAGCTCGCCGAGAAACACAACCGTTTCTCTCTCCTCCAATCCACCGCCGCCGCTGCCAATTCACTGCCGTTGTGCGATATCTGCCAGGTCCGGCGAGCGTTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATTCCAATTCACATCACCAACGATCGAACCCAGAAGCACACCCGGTTTCTTCTCACCGGCGTGAAGGTCTCGCCGTCGCCGTTGGCTTCTTCTACTTCCTCATCCTCCGTCTCAGGCGGCGGCGAAGAAATTGAAGGCGAAATTGGGTTGTTCAAGAGACGCTCGAGGAAGAGGGCTAAAATGGAGGAATTAGAGAAGCCATTGAATGTTGAAGAAAATGGGGTATCAATAAGCAGTATTTGGGAGTATTTGGAGAGTTTGCCTGGTTGGTGCGTGGAGGAGTTTCTTGATTCTTCATCTACTGCTGATATTTTTCTGTAAAGTTTGAAAAATTAAAAAATAAAAAAAAAAATTCTTTGTTGAAGGTACCACAAAGCTATCAAATTATTATTTGATGTGAGTTTAAGTTTGTCTATTCCTTGTTCATATGATAAACAAAGAGATTGATGTTCTTTTGGAGATTTATAAGTGGATTTATGATATCAG

mRNA sequence

GATTGAGGAAAACTGAAAAGAAAGAAGAAAGAAGAAAAGAAGAAAATGAAGATCCGTTGTGATGTTTGCGAGAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCGGCCCTCTGTGCCGCCTGTGACCGCCACGTCCACCGCGCCAACAAGCTCGCCGAGAAACACAACCGTTTCTCTCTCCTCCAATCCACCGCCGCCGCTGCCAATTCACTGCCGTTGTGCGATATCTGCCAGGTCCGGCGAGCGTTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATTCCAATTCACATCACCAACGATCGAACCCAGAAGCACACCCGGTTTCTTCTCACCGGCGTGAAGGTCTCGCCGTCGCCGTTGGCTTCTTCTACTTCCTCATCCTCCGTCTCAGGCGGCGGCGAAGAAATTGAAGGCGAAATTGGGTTGTTCAAGAGACGCTCGAGGAAGAGGGCTAAAATGGAGGAATTAGAGAAGCCATTGAATGTTGAAGAAAATGGGGTATCAATAAGCAGTATTTGGGAGTATTTGGAGAGTTTGCCTGGTTGGTGCGTGGAGGAGTTTCTTGATTCTTCATCTACTGCTGATATTTTTCTGTAAAGTTTGAAAAATTAAAAAATAAAAAAAAAAATTCTTTGTTGAAGGTACCACAAAGCTATCAAATTATTATTTGATGTGAGTTTAAGTTTGTCTATTCCTTGTTCATATGATAAACAAAGAGATTGATGTTCTTTTGGAGATTTATAAGTGGATTTATGATATCAG

Coding sequence (CDS)

ATGAAGATCCGTTGTGATGTTTGCGAGAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCGGCCCTCTGTGCCGCCTGTGACCGCCACGTCCACCGCGCCAACAAGCTCGCCGAGAAACACAACCGTTTCTCTCTCCTCCAATCCACCGCCGCCGCTGCCAATTCACTGCCGTTGTGCGATATCTGCCAGGTCCGGCGAGCGTTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATTCCAATTCACATCACCAACGATCGAACCCAGAAGCACACCCGGTTTCTTCTCACCGGCGTGAAGGTCTCGCCGTCGCCGTTGGCTTCTTCTACTTCCTCATCCTCCGTCTCAGGCGGCGGCGAAGAAATTGAAGGCGAAATTGGGTTGTTCAAGAGACGCTCGAGGAAGAGGGCTAAAATGGAGGAATTAGAGAAGCCATTGAATGTTGAAGAAAATGGGGTATCAATAAGCAGTATTTGGGAGTATTTGGAGAGTTTGCCTGGTTGGTGCGTGGAGGAGTTTCTTGATTCTTCATCTACTGCTGATATTTTTCTGTAA

Protein sequence

MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPLCDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSSSVSGGGEEIEGEIGLFKRRSRKRAKMEELEKPLNVEENGVSISSIWEYLESLPGWCVEEFLDSSSTADIFL

Homology

[Close]

BLAST of Clc11G04330 vs. NCBI nr
Match: XP_038902472.1 (B-box zinc finger protein 21-like [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 2.3e-80
Identity = 165/201 (82.09%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKIRCDVC+KEEASVFCPSDEAALCAACDRHVHRANKLA KHNRFSLLQSTAAA +SLPL
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCAACDRHVHRANKLAGKHNRFSLLQSTAAAVDSLPL 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSP---LASST 120
           CDICQVRRAFLFCREDRAILCRECDI IH  +D TQKH+RFLLTGVKVSPSP    +SS+
Sbjct: 61  CDICQVRRAFLFCREDRAILCRECDISIHSISDHTQKHSRFLLTGVKVSPSPATSTSSSS 120

Query: 121 SSSSVSGGGEEIEGEIGLFKRRSRKRAKMEEL-EKPLN-----VEENGVSI--SSIWEYL 180
           SSSSVSGGG+EIEGEIGL K+ S+KRAKMEEL  +PLN     VEENG S   SSI EYL
Sbjct: 121 SSSSVSGGGKEIEGEIGLLKKCSKKRAKMEELPRQPLNVGKLEVEENGESFTRSSISEYL 180

Query: 181 ESLPGWCVEEFLDSSSTADIF 191
           ESLPGWCVEEFLDSS  ADIF
Sbjct: 181 ESLPGWCVEEFLDSSCAADIF 201

[Close]

BLAST of Clc11G04330 vs. NCBI nr
Match: KAG6571083.1 (B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010899.1 B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.8 bits (691), Expect = 9.1e-69
Identity = 148/214 (69.16%), Postives = 167/214 (78.04%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKIRCDVC KEEASVFCPSDEAALC+ACD HVHRANKLAEKH+RF+LL+ST   ANS P 
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRST-PTANSPPS 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQVRRAFLFC EDRAILCRECDIPIH  ++ TQKH+RFLLTGVKVSPSP A+S+SSS
Sbjct: 61  CDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSP-ATSSSSS 120

Query: 121 SVSGGGEE------IEGEIGLFKRRSRKRAK-----------MEELEKPL-----NVEEN 180
           +VSGGG +      IE EIG+FK  SRK+AK           ME+L+ P+      + EN
Sbjct: 121 TVSGGGSDESEEVTIEAEIGIFKASSRKKAKMGSKGLLRGPLMEDLQAPIVGNFGGMSEN 180

Query: 181 GVSI--SSIWEYLESLPGWCVEEFLDSSSTADIF 191
           GVS   S+I EYLESLPGWCVEEFLDSS  AD+F
Sbjct: 181 GVSFSTSNISEYLESLPGWCVEEFLDSSCVADVF 212

[Close]

BLAST of Clc11G04330 vs. NCBI nr
Match: XP_022944246.1 (B-box zinc finger protein 20-like [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 2.7e-68
Identity = 147/214 (68.69%), Postives = 166/214 (77.57%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKIRCDVC KEEASVFCPSDEAALC+ACD HVHRANKLAEKH+RF+LL+ST    NS P 
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRST-PTGNSPPS 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQVRRAFLFC EDRAILCRECDIPIH  ++ TQKH+RFLLTGVKVSPSP A+S+SSS
Sbjct: 61  CDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSP-ATSSSSS 120

Query: 121 SVSGGGEE------IEGEIGLFKRRSRKRAK-----------MEELEKPL-----NVEEN 180
           +VSGGG +      IE EIG+FK  SRK+AK           ME+L+ P+      + EN
Sbjct: 121 TVSGGGSDESAEVTIEAEIGIFKASSRKKAKMGSKGLLRGPLMEDLQAPIVGNFGGMSEN 180

Query: 181 GVSI--SSIWEYLESLPGWCVEEFLDSSSTADIF 191
           GVS   S+I EYLESLPGWCVEEFLDSS  AD+F
Sbjct: 181 GVSFSTSNISEYLESLPGWCVEEFLDSSCVADVF 212

[Close]

BLAST of Clc11G04330 vs. NCBI nr
Match: XP_023513248.1 (B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-68
Identity = 148/213 (69.48%), Postives = 164/213 (77.00%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKIRCDVC +EEASVFCPSDEAALC+ACD HVH ANKLAEKH+RF+LL+ST    NS P 
Sbjct: 1   MKIRCDVCNREEASVFCPSDEAALCSACDHHVHCANKLAEKHSRFTLLRST-PTVNSPPS 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQVRRAFLFC EDRAILCRECDIPIH  ++ TQKH+RFLLTGVKVSPSP  SS SSS
Sbjct: 61  CDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSPTTSS-SSS 120

Query: 121 SVSGGGEE-----IEGEIGLFKRRSRKRAK-----------MEELEKPL-----NVEENG 180
           SVSGGG+E     IE EIG+FK RSRK AK           ME+L+ P+      + ENG
Sbjct: 121 SVSGGGDESEEVTIEAEIGIFKTRSRKEAKMGSKGLIRGPVMEDLQPPIVGKFGGMSENG 180

Query: 181 V--SISSIWEYLESLPGWCVEEFLDSSSTADIF 191
           V  S S+I EYLESLPGWCVEEFLDSS  AD+F
Sbjct: 181 VAFSTSNISEYLESLPGWCVEEFLDSSCVADVF 211

[Close]

BLAST of Clc11G04330 vs. NCBI nr
Match: XP_022986607.1 (B-box zinc finger protein 20-like [Cucurbita maxima])

HSP 1 Score: 267.7 bits (683), Expect = 7.7e-68
Identity = 147/213 (69.01%), Postives = 165/213 (77.46%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI CDVC KEEASVFCPSDEAALC+ACD HVHRANKLAEKH+RF+L +ST   ANS P 
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRST-PTANSPPS 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQVRRAFLF  EDRAILCRECDIPIH  ++ TQKH+RFLLTGVKVSPSP A+S+SSS
Sbjct: 61  CDICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSP-ATSSSSS 120

Query: 121 SVSGGGEE-----IEGEIGLFKRRSRKRAK-----------MEELEKPL-----NVEENG 180
           S+SGGG+E     IE EIG+FK RSRK AK           ME+L+ P+      + ENG
Sbjct: 121 SISGGGDESEEVTIEAEIGIFKARSRKEAKMGSKGLLRGPLMEDLQAPIVGNFGGMSENG 180

Query: 181 VSI--SSIWEYLESLPGWCVEEFLDSSSTADIF 191
           VS   S+I EYLESLPGWCVEEFLDSS  AD+F
Sbjct: 181 VSFSTSNISEYLESLPGWCVEEFLDSSCVADVF 211

[Close]

BLAST of Clc11G04330 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.4e-42
Identity = 105/200 (52.50%), Postives = 134/200 (67.00%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKIRCDVC+KEEASVFC +DEA+LC  CD  VH ANKLA KH RFSLL  +++  +S PL
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSS-PL 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVS-------PSPL 120
           CDICQ ++A LFC++DRAILC++CD  IH  N+ T+KH RFLLTGVK+S       P+  
Sbjct: 61  CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSK 120

Query: 121 ASSTSSSS--VSGGGEEIEGEIGLFKRRSR--KRAKMEELEK----PLNVEENGVSISSI 180
           +SS+SSS+   S  G  I     L K  S   +  K++   K      +V + G S S+I
Sbjct: 121 SSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWG-STSTI 180

Query: 181 WEYL-ESLPGWCVEEFLDSS 185
            EYL ++LPGW VE+FLDSS
Sbjct: 181 SEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of Clc11G04330 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.4e-41
Identity = 107/216 (49.54%), Postives = 123/216 (56.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI C VC+KEEASVFC +DEAALC  CDRHVH ANKLA KH RFSL   T+      PL
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSL---TSPTFKDAPL 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDIC  RRA LFC+EDRAILCRECDIPIH  N+ T+KH RFLLTGVK+S SP A   +S+
Sbjct: 61  CDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASN 120

Query: 121 SVSGGGEEIEGEIGLFKRRSRKRAKMEELEKP--------------------LNVEENGV 180
           S S               R++ R K    E P                      +EEN  
Sbjct: 121 SNSAAA----------FGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYH 180

Query: 181 SIS----------SIWEYL-ESLPGWCVEEFLDSSS 186
            +S          SI EYL E+LPGW VE+ L+  S
Sbjct: 181 HVSDSGSGSGCTGSISEYLMETLPGWRVEDLLEHPS 203

[Close]

BLAST of Clc11G04330 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI+C+VCE  EA+V C +DEAALC ACD  +H ANKLA KH R  L    +A+A+S+P 
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL----SASASSIPK 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQ    F FC +DRA+LCR+CD+ IH  N     H RFLLTG+KV    + +  S+ 
Sbjct: 61  CDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTK 117

Query: 121 S 122
           S
Sbjct: 121 S 117

[Close]

BLAST of Clc11G04330 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-29
Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI+CDVCEK  A+V C +DEAALC  CD  +H ANKLA KH R  L     + +   P 
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL----NSLSTKFPR 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVS 110
           CDICQ + AF+FC EDRA+LCR+CD  IH+ N R+  H RFL TG+KV+
Sbjct: 61  CDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

[Close]

BLAST of Clc11G04330 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-28
Identity = 70/148 (47.30%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAA--ANSL 60
           MKI+C+VCEK EA V C SDEA LC  CD  VH ANKL ++H+R +L +  A+A  A+  
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 61  PLCDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLA-SST 120
           PLCDICQ R+ + FC EDRA+LC +CD  IH  N     H RFLL+GV+VS   L  +S 
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQVSDQSLTENSE 120

Query: 121 SSSSVSGGGEEIEGEIGLFKRRSRKRAK 146
            S+S S    +I+ ++ L  + S +  +
Sbjct: 121 CSTSFSSETYQIQSKVSLNSQYSSEETE 144

[Close]

BLAST of Clc11G04330 vs. ExPASy TrEMBL
Match: A0A6J1FTW5 (B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 147/214 (68.69%), Postives = 166/214 (77.57%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKIRCDVC KEEASVFCPSDEAALC+ACD HVHRANKLAEKH+RF+LL+ST    NS P 
Sbjct: 1   MKIRCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLLRST-PTGNSPPS 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQVRRAFLFC EDRAILCRECDIPIH  ++ TQKH+RFLLTGVKVSPSP A+S+SSS
Sbjct: 61  CDICQVRRAFLFCLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSP-ATSSSSS 120

Query: 121 SVSGGGEE------IEGEIGLFKRRSRKRAK-----------MEELEKPL-----NVEEN 180
           +VSGGG +      IE EIG+FK  SRK+AK           ME+L+ P+      + EN
Sbjct: 121 TVSGGGSDESAEVTIEAEIGIFKASSRKKAKMGSKGLLRGPLMEDLQAPIVGNFGGMSEN 180

Query: 181 GVSI--SSIWEYLESLPGWCVEEFLDSSSTADIF 191
           GVS   S+I EYLESLPGWCVEEFLDSS  AD+F
Sbjct: 181 GVSFSTSNISEYLESLPGWCVEEFLDSSCVADVF 212

[Close]

BLAST of Clc11G04330 vs. ExPASy TrEMBL
Match: A0A6J1J816 (B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.7e-68
Identity = 147/213 (69.01%), Postives = 165/213 (77.46%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI CDVC KEEASVFCPSDEAALC+ACD HVHRANKLAEKH+RF+L +ST   ANS P 
Sbjct: 1   MKIHCDVCNKEEASVFCPSDEAALCSACDHHVHRANKLAEKHSRFTLFRST-PTANSPPS 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQVRRAFLF  EDRAILCRECDIPIH  ++ TQKH+RFLLTGVKVSPSP A+S+SSS
Sbjct: 61  CDICQVRRAFLFYLEDRAILCRECDIPIHGASEHTQKHSRFLLTGVKVSPSP-ATSSSSS 120

Query: 121 SVSGGGEE-----IEGEIGLFKRRSRKRAK-----------MEELEKPL-----NVEENG 180
           S+SGGG+E     IE EIG+FK RSRK AK           ME+L+ P+      + ENG
Sbjct: 121 SISGGGDESEEVTIEAEIGIFKARSRKEAKMGSKGLLRGPLMEDLQAPIVGNFGGMSENG 180

Query: 181 VSI--SSIWEYLESLPGWCVEEFLDSSSTADIF 191
           VS   S+I EYLESLPGWCVEEFLDSS  AD+F
Sbjct: 181 VSFSTSNISEYLESLPGWCVEEFLDSSCVADVF 211

[Close]

BLAST of Clc11G04330 vs. ExPASy TrEMBL
Match: A0A0A0LIV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G250430 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.0e-65
Identity = 138/194 (71.13%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTA---AAANS 60
           MKIRCDVC+KEEASVFCPSDEAALCA CDR +HRANKLA +HNRFSLL S+A   AAA S
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCAPCDRQIHRANKLASQHNRFSLLHSSASASAAATS 60

Query: 61  LPLCDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASST 120
            PLCDICQ+RRAFLFCREDRAILCRECDIPIH T++ TQKH+RFLLTGVKVSPSP  SS+
Sbjct: 61  EPLCDICQIRRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSPATSSS 120

Query: 121 SSSSVSGGGEEIEGEIGLFKRRSRKRAKMEELEKPLNVEENGVSISSIWEYLESLPGWCV 180
            SSSV+  GEE EG +   K+ SRKR+KM            G+ IS   EYLESLPGWCV
Sbjct: 121 CSSSVASSGEENEGSL---KKCSRKRSKMG--------FSKGLVIS---EYLESLPGWCV 180

Query: 181 EEFLDSSSTADIFL 192
           EEFLDSSS+  +FL
Sbjct: 181 EEFLDSSSSPHLFL 180

[Close]

BLAST of Clc11G04330 vs. ExPASy TrEMBL
Match: A0A5A7TQI3 (B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00410 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.3e-64
Identity = 137/192 (71.35%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTA-AAANSLP 60
           MKIRCDVC+KEEASVFCPSDEAALC ACDR VHRANKLA KH+RFSLL S A AAA S P
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCPACDRQVHRANKLASKHSRFSLLHSAASAAATSQP 60

Query: 61  LCDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSS 120
           LCD+CQ++RAFLFCREDRAILCRECDIPIH T++ TQKH+RFLLTGVKVSPS   SS+ S
Sbjct: 61  LCDVCQIQRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSTATSSSCS 120

Query: 121 SSVSGGGEEIEGEIGLFKRRSRKRAKMEELEKPLNVEENGVSISSIWEYLESLPGWCVEE 180
           SSV  GGEE E   GL K+ SRKR+KM            G+ IS   EYLESLPGWCVE+
Sbjct: 121 SSVGSGGEENE---GLLKKCSRKRSKMG--------FSKGLVIS---EYLESLPGWCVED 178

Query: 181 FLDSSSTADIFL 192
           FLDSSS+  I L
Sbjct: 181 FLDSSSSPHILL 178

[Close]

BLAST of Clc11G04330 vs. ExPASy TrEMBL
Match: A0A1S3CDR2 (B-box zinc finger protein 21-like OS=Cucumis melo OX=3656 GN=LOC103499713 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.3e-64
Identity = 137/192 (71.35%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTA-AAANSLP 60
           MKIRCDVC+KEEASVFCPSDEAALC ACDR VHRANKLA KH+RFSLL S A AAA S P
Sbjct: 1   MKIRCDVCDKEEASVFCPSDEAALCPACDRQVHRANKLASKHSRFSLLHSAASAAATSQP 60

Query: 61  LCDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSS 120
           LCD+CQ++RAFLFCREDRAILCRECDIPIH T++ TQKH+RFLLTGVKVSPS   SS+ S
Sbjct: 61  LCDVCQIQRAFLFCREDRAILCRECDIPIHDTSEHTQKHSRFLLTGVKVSPSTATSSSCS 120

Query: 121 SSVSGGGEEIEGEIGLFKRRSRKRAKMEELEKPLNVEENGVSISSIWEYLESLPGWCVEE 180
           SSV  GGEE E   GL K+ SRKR+KM            G+ IS   EYLESLPGWCVE+
Sbjct: 121 SSVGSGGEENE---GLLKKCSRKRSKMG--------FSKGLVIS---EYLESLPGWCVED 178

Query: 181 FLDSSSTADIFL 192
           FLDSSS+  I L
Sbjct: 181 FLDSSSSPHILL 178

[Close]

BLAST of Clc11G04330 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 172.9 bits (437), Expect = 2.4e-43
Identity = 105/200 (52.50%), Postives = 134/200 (67.00%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKIRCDVC+KEEASVFC +DEA+LC  CD  VH ANKLA KH RFSLL  +++  +S PL
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSS-PL 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVS-------PSPL 120
           CDICQ ++A LFC++DRAILC++CD  IH  N+ T+KH RFLLTGVK+S       P+  
Sbjct: 61  CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSK 120

Query: 121 ASSTSSSS--VSGGGEEIEGEIGLFKRRSR--KRAKMEELEK----PLNVEENGVSISSI 180
           +SS+SSS+   S  G  I     L K  S   +  K++   K      +V + G S S+I
Sbjct: 121 SSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWG-STSTI 180

Query: 181 WEYL-ESLPGWCVEEFLDSS 185
            EYL ++LPGW VE+FLDSS
Sbjct: 181 SEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of Clc11G04330 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.5e-42
Identity = 107/216 (49.54%), Postives = 123/216 (56.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI C VC+KEEASVFC +DEAALC  CDRHVH ANKLA KH RFSL   T+      PL
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSL---TSPTFKDAPL 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDIC  RRA LFC+EDRAILCRECDIPIH  N+ T+KH RFLLTGVK+S SP A   +S+
Sbjct: 61  CDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASN 120

Query: 121 SVSGGGEEIEGEIGLFKRRSRKRAKMEELEKP--------------------LNVEENGV 180
           S S               R++ R K    E P                      +EEN  
Sbjct: 121 SNSAAA----------FGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYH 180

Query: 181 SIS----------SIWEYL-ESLPGWCVEEFLDSSS 186
            +S          SI EYL E+LPGW VE+ L+  S
Sbjct: 181 HVSDSGSGSGCTGSISEYLMETLPGWRVEDLLEHPS 203

[Close]

BLAST of Clc11G04330 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 131.3 bits (329), Expect = 8.0e-31
Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI+C+VCE  EA+V C +DEAALC ACD  +H ANKLA KH R  L    +A+A+S+P 
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL----SASASSIPK 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQ    F FC +DRA+LCR+CD+ IH  N     H RFLLTG+KV    + +  S+ 
Sbjct: 61  CDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTK 117

Query: 121 S 122
           S
Sbjct: 121 S 117

[Close]

BLAST of Clc11G04330 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 )

HSP 1 Score: 131.3 bits (329), Expect = 8.0e-31
Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI+C+VCE  EA+V C +DEAALC ACD  +H ANKLA KH R  L    +A+A+S+P 
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL----SASASSIPK 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSS 120
           CDICQ    F FC +DRA+LCR+CD+ IH  N     H RFLLTG+KV    + +  S+ 
Sbjct: 61  CDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTK 117

Query: 121 S 122
           S
Sbjct: 121 S 117

[Close]

BLAST of Clc11G04330 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 1   MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPL 60
           MKI+CDVCEK  A+V C +DEAALC  CD  +H ANKLA KH R  L     + +   P 
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL----NSLSTKFPR 60

Query: 61  CDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVS 110
           CDICQ + AF+FC EDRA+LCR+CD  IH+ N R+  H RFL TG+KV+
Sbjct: 61  CDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

The following BLAST results are available for this feature:

BLAST of Clc11G04330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902472.1	2.3e-80	82.09	B-box zinc finger protein 21-like [Benincasa hispida]	[more]
KAG6571083.1	9.1e-69	69.16	B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022944246.1	2.7e-68	68.69	B-box zinc finger protein 20-like [Cucurbita moschata]	[more]
XP_023513248.1	3.5e-68	69.48	B-box zinc finger protein 20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986607.1	7.7e-68	69.01	B-box zinc finger protein 20-like [Cucurbita maxima]	[more]

BLAST of Clc11G04330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ7	3.4e-42	52.50	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q0IGM7	6.4e-41	49.54	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q9SYM2	1.1e-29	52.89	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q96288	2.5e-29	55.96	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
O82617	2.8e-28	47.30	B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1	[more]

BLAST of Clc11G04330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTW5	1.3e-68	68.69	B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448752 ...	[more]
A0A6J1J816	3.7e-68	69.01	B-box zinc finger protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484297 PE...	[more]
A0A0A0LIV6	3.0e-65	71.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G250430 PE=4 SV=1	[more]
A0A5A7TQI3	4.3e-64	71.35	B-box zinc finger protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CDR2	4.3e-64	71.35	B-box zinc finger protein 21-like OS=Cucumis melo OX=3656 GN=LOC103499713 PE=4 S...	[more]

BLAST of Clc11G04330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75540.1	2.4e-43	52.50	salt tolerance homolog2	[more]
AT4G39070.1	4.5e-42	49.54	B-box zinc finger family protein	[more]
AT1G78600.1	8.0e-31	52.89	light-regulated zinc finger protein 1	[more]
AT1G78600.2	8.0e-31	52.89	light-regulated zinc finger protein 1	[more]
AT1G06040.2	1.8e-30	55.96	B-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 3.7E-9 score: 46.4 coord: 56..103 e-value: 7.3E-13 score: 58.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 58..99 e-value: 1.6E-6 score: 28.2 coord: 3..44 e-value: 9.3E-7 score: 28.9
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 56..103 score: 9.641247
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.864546
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..102 e-value: 3.8E-10 score: 42.1
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..187
None	No IPR available	PANTHER	PTHR31832:SF18	B-BOX ZINC FINGER PROTEIN 21	coord: 1..187
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 1.53296E-14 score: 62.7003
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 60..103 e-value: 6.48643E-13 score: 58.4631

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G04330.1	Clc11G04330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding