Clc11G04240 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G04240
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr11: 4022685 .. 4027375 (+)
RNA-Seq ExpressionClc11G04240
SyntenyClc11G04240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGCGAGTCTTATAGATTAGTATTTGAGAGAAAGAGAGAGAGCGAGAGAGAGTTTTTTGGGGACGAACCCTTTGCGCTTGTAGTTGGAATTGTATTATATTGATCGTTCATAGCCAGAAAAAGTCTTCAAGAATTTGGAGATGGGTGAATCAGACGGAGTTCAAAATCAAGCGCCTAATCTTACTTCTAATGGGGCTAAAGATTCGAAAGGCAAGTCTTGTAAGGGCTGCCTCTATTACTCTTCACTTCAGAAATCCAAATCTGAAACACCCACTTGCATTGGATTGTCCAAAACTCTCGACCAAGGTACCCCTCCATTTCTCTTTTCTATTTCTTCTTGATTGTTTCGGATTCAATTTCATTAGTAGGTAATTGGTTCAGAATCGTATTCAGTTTCATTTTTTATCATCTGGGTGCTGATTACTTTTTTTTATTTTTTTTTAATTTTTATTTTGTGATGTGTTATTGTATTTTGTTTTATCTCTCTTAATTTGGGTTATGCAATGGCCGCTTCTTGAAATTCAAGGAGCTTCGTGTTCTTTTCCACAAGTCACCGGCTAACCTGTGTTTGGTATGATCTTTATGATTATGGCGGTTGTGCATAGTGTTTGAAGTCTGTCTTAACTTTCTTTGATAAGGTAATTCTATGAAAAAAGAGAAGACCCCATTGTTCCTTCCTAGCCATGGAGACCAAAAGAAGATCTTAAATGTAGTAAGGAGAATGTTGGTGTCCATGGAGAGCTCAAGCACCATGTCCTACTTAAAAGTTGAGAGGATGCAAGTTTAGAAATTGATAGTATATGTGCAAGTAAGGAATGTGTGACTTTGTGATTCTGATTCTTTCATGGAAAGGGAACACCACCTTAGAGAAGATAGCATTTAAAAAAAAAAAAAAATCAAGAAACCGAGGAGAAACCATTTTTGAATCCTATCACAAATGTTTATGCTTGAGTGGTTATGTTCCTAAAAGTAGAACTTGATCTTTTTTTGGGTATTTGCTCTTCCAAATGCCTATGAAGAGGCTTTTTTGTCCTCTTCTTTTTAACAAGGTCTTGGGTGAGGGGGCTCACTGAAAGAGGTTGTTTGGTTCACGTTGCCATAACCAAGTATCTTTGATGTAGATTGATGAAAGAGGAGAGCAAGTGGATTAAAGAATCCCCATTTCTGAATATCAAAATCCAGACAGTAGAAAATGTTAGATGAGTGAAAGAGGAGAGCAAGTGTATCATGAATCAAGTTACTAAGAGGAAACCTTTGGATTTTGGATAAACAGACACTAGAGAAATTTTTTTGAACCTTAACCTAAAGATTAGGAATCTTTTGGGATTGAAGTGAAAACTGAACTATGCTTGCAGAAGAATGGCTAAGCATGGTTGGTACTATGAACACGGAATAAAAGACAAGCCTATTAGCTGAACAAAGAGGGTATAGAATGAGCTACATTACTTCATTTAGAAGCTAGAAGTATGAGTGAAAGTAGGGTGAGAGAAAGTAGTACTTGTGAAAAACAATTTATGGGTAAGCGTTTGGGAAAAGGCTATTGGAAGTGAAATTGGCAAAGGTCCTTGAAAACGAGGAAAGGATTAATCAGAAGAATTCAAGCCACCTCCAGACATCTACTGTACCAATGCCATAGAAATGTGATATTTAACCACACAAACATGAAGAAATCACTTGGTCTAAACGTTTGTCACCATGTCCCTAAGATATTAATATATGATGTGGGATTAGTCAAAGTTGCATGATGCATTTAAAGTAGTTTGGACACTAATAGTTAAAGAATGCTACAGCAAAATAAAACCCAGAACATTTGTGGTGTCCATAGCATATCTGGATATGATAGTTTTGTGTATTCAGTGATGGTAGGGATGGATTATTGAGGTAGAAAAAGACCTGGTCCATTTTACCACTGCCAATGTGCCTATTGTTTGGTCGAAGATGCTCAGTATGATCAACCAGATTCTTTGTACCAAATGTTATCTAATTTATTGCCCTTAGGCCTTAAGTTAAGATGTATTTTCAATCCAATAGACAAATGAAAATGCTCTAAATGGCTGAGGGCTAACAAGTCAAGGCATGCTGAAGTGTTATGGGGATTTGCTGTCAGAGCTATGGTGTGGGACTGCTGCTTAGGAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAAAGAAAAGAAAAAACTAGAGATTGTTTGAAGATAAGTTCTCTACTTTTGAGCCTTTTTTTAAGCAATGAACGGCTTGTTGCCCTGGGCGGTGTCACAACAATTGCAAATTTATTTTGTAATTATCTTTTATTTATTTATTTTGTGAACATGGTTTTTTTCCCCCTTTTTATTTATTTATTTATTTTTTTATAAATTATCCAATGTGGTTGATCACTAACAATTCAAAAAGCTTTTGTAATTAGCCTCCTTGGAAGGGGATCCCACCCCCTGCCCTTAGGCTGTTTTCTCTTCTTTGTCTTAATATACTCCCCAGGATTCTCATTAAAAACGAAAAAAGTTTAGAATTTAGATGATTTTGTATCATAAATATCTCCCTAGGTGCTCTTGCGGCTGTTGAAGAGAATTTTGTAGAGGAATTGCTCTGGAATCAATTTAATTACTGACACGATTGTATCGACTATTGAAAAGTGGTGTTAGTACTTCTTAATTTAAACTTTTGAGAATTTTCTTCGTTTGAAGTTTTTAGATTGATAGCTTAAACAAACAAGCTGGGTTTTCCTTCAATATTTGTGGTTCTTTTACGTTTGTAAACGACTCCTGTGCAGATATGAAGTAAGCTAACACTAACATTTTGCGGGATATATAGTAATTCGTCGATTTTTCTAAGCAGTACCGAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGGCGCAGTCTTACTGATTTCAAGTATGCTTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGATTCTTCAAATGATGTGCAGAATAAACAAGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTTTGAAACGTCTCAATTTTTCTGTTAGATACAAAAATATTAAAACATCTTTATGTATCATTACTTTTTGTTGACATGTTTAGCATAGAATATATTTACTTTTAGTTTAGCTCTCATCTGTTTAGGATAGTGTTGCTCAGCTTATTCTCTACAACTAAGCTTAAAATTTATTGTATTGGAATTTGGAGGTTCATTATGTCTAATGCATGTTTATGTAAATTAAACTACAGCTCCTGGAACCTGTAAGGTAGGTAACGTTAAAAATTTTAAATGCTGTTTTAAGCTGAGTTCTTAATCATATAAATGTGAGATTTGAAATTTTAGATGCAGTTAAATTTCTGTCGCCCAAAGAATATTCTTCTATCATTTTATATTACCTTGACCATAAACATATGCTTGTTAGGTATTGCTGGACATGAGACCAGCTGAACATTCCCAAGGTCATGTCCATAATAAAACTGGAGGTACTACAAGTTACCATATCATTTTGTTCGACTACTAAATATCTCTCAGTTTTCCAGAAGTACTAATATCCTTCCTTTAGGGTGGAGAGCAAAATTTTGTGGTGGACTAGATTCTTTGCTGTCTTGTGCAGTTTTATGGGGTATTTGGATTGAGTGAAATAACAGAATTTGAAGAGAAATTGACATATCGGGTGAGGAGGTTTGGGAGGTGGCTAGGTTTAATGCCTCATTGCCTGTATCGGTCACTAGATGTGACCTTTTTGTAATTATGAGCTTGGTCTTGTTCTTCTAGGTCGAAGTCTTTTCATGTTATTGTGGTCGGACTCCTTTTCGTTGGGACTTTTTTTTAGGTCTGCCTTTGTATATTCTTTCATTTCTCCCCGCTTTTCACAAGTAATTCCTTTTGCTGGGCAGCGGGAATCCTCGTCTTTATTTTTTTCTATATTCTTCTGTTCTTCTATCTTTATATAAACTCCGATTTGACATCGATAAATCCATTAAACCTGTGTCACAGAGATACTAATCTTCAAATTTTGATCTTGATATTCAGCAGATAGCCCTGCCTTTCCACAGCCACGTAACTATAAACCGTCGTATCCAGCTGGAGACGAGTATCTAAACAGGCAAGAACTTTTCGATACTCATCTTTTGACTGCTAAATAAACAGCTTTCAATTTATTAGCAATATCAAGCATCACAAAAAATTTTAATACCCAAAGAGTGCAATGTTCAGGTTTAAACGAAACGCAACCCTTGTCGCATCAGGTGTAGCAAGGAATGTGAACAGAGTTTGCAACTACATAAAAGAGAGTTTCAATGATATTTTATACCCTTATCGAAGACGACCGAAATGAGTTAGTACGTCCATGGATTGCTAGAATAAAGATCAGTCATTACAGCAAGTTGGTCGCAGAATCCCGGCATCGCCCAATCGTGTGAAATATTGATAAAATTCTCATCTTTCTTATAAACTGTTTAGAGATGACATCGAGGTAGCACGTTGTCTTTACTTGGCTGTAATAAATAATATAACGAATTTAAATTTTTATGATTGTTTATGTTCTGATGCAAAGCCTTTGCTTTTGCTAGGAGAGGACTCAAAGCTTGGTCTTTGAATCTCAGGATGAGTTTCAAAATGCATATTTATTAGTTTCTCAATTCATTTTATGATATTAAATATGTTAATATGTGGTATTCACCGCAATTAATAAAACCTTGAG

mRNA sequence

CTTGCGAGTCTTATAGATTAGTATTTGAGAGAAAGAGAGAGAGCGAGAGAGAGTTTTTTGGGGACGAACCCTTTGCGCTTGTAGTTGGAATTGTATTATATTGATCGTTCATAGCCAGAAAAAGTCTTCAAGAATTTGGAGATGGGTGAATCAGACGGAGTTCAAAATCAAGCGCCTAATCTTACTTCTAATGGGGCTAAAGATTCGAAAGGCAAGTCTTGTAAGGGCTGCCTCTATTACTCTTCACTTCAGAAATCCAAATCTGAAACACCCACTTGCATTGGATTGTCCAAAACTCTCGACCAAGTACCGAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGGCGCAGTCTTACTGATTTCAAGTATGCTTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGATTCTTCAAATGATGTGCAGAATAAACAAGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGCTGGACATGAGACCAGCTGAACATTCCCAAGGTCATGTCCATAATAAAACTGGAGATAGCCCTGCCTTTCCACAGCCACGTAACTATAAACCGTCGTATCCAGCTGGAGACGAGTTTAAACGAAACGCAACCCTTGTCGCATCAGGTGTAGCAAGGAATGTGAACAGAGTTTGCAACTACATAAAAGAGAGTTTCAATGATATTTTATACCCTTATCGAAGACGACCGAAATGAGTTAGTACGTCCATGGATTGCTAGAATAAAGATCAGTCATTACAGCAAGTTGGTCGCAGAATCCCGGCATCGCCCAATCGTGTGAAATATTGATAAAATTCTCATCTTTCTTATAAACTGTTTAGAGATGACATCGAGGTAGCACGTTGTCTTTACTTGGCTGTAATAAATAATATAACGAATTTAAATTTTTATGATTGTTTATGTTCTGATGCAAAGCCTTTGCTTTTGCTAGGAGAGGACTCAAAGCTTGGTCTTTGAATCTCAGGATGAGTTTCAAAATGCATATTTATTAGTTTCTCAATTCATTTTATGATATTAAATATGTTAATATGTGGTATTCACCGCAATTAATAAAACCTTGAG

Coding sequence (CDS)

ATGGGTGAATCAGACGGAGTTCAAAATCAAGCGCCTAATCTTACTTCTAATGGGGCTAAAGATTCGAAAGGCAAGTCTTGTAAGGGCTGCCTCTATTACTCTTCACTTCAGAAATCCAAATCTGAAACACCCACTTGCATTGGATTGTCCAAAACTCTCGACCAAGTACCGAACTACATAGTGGGAGAAACTGAGTTGGAAGCTTCAAAAGAGGGGCGCAGTCTTACTGATTTCAAGTATGCTTGCGTTGGTTACTCTGTCTACTTAGAAAAGAAAGATTCTTCAAATGATGTGCAGAATAAACAAGCTGAGCTGCCCTTCTGCGTTGGTTTAGAGGTATTGCTGGACATGAGACCAGCTGAACATTCCCAAGGTCATGTCCATAATAAAACTGGAGATAGCCCTGCCTTTCCACAGCCACGTAACTATAAACCGTCGTATCCAGCTGGAGACGAGTTTAAACGAAACGCAACCCTTGTCGCATCAGGTGTAGCAAGGAATGTGAACAGAGTTTGCAACTACATAAAAGAGAGTTTCAATGATATTTTATACCCTTATCGAAGACGACCGAAATGA

Protein sequence

MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPAEHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDEFKRNATLVASGVARNVNRVCNYIKESFNDILYPYRRRPK
Homology
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BLAST of Clc11G04240 vs. NCBI nr
Match: XP_038900455.1 (uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida])

HSP 1 Score: 368.2 bits (944), Expect = 4.2e-98
Identity = 180/195 (92.31%), Postives = 184/195 (94.36%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETELEASKEGRSL DFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYIK 180
           EHSQ HVHNKT DSPAFPQPR YKPSYPAGDE    FKRNA LVASGVARNVNR+CNY+K
Sbjct: 121 EHSQAHVHNKTEDSPAFPQPRTYKPSYPAGDEYLNRFKRNAALVASGVARNVNRICNYVK 180

Query: 181 ESFNDILYPYRRRPK 192
           ESF+DILYPYRRRPK
Sbjct: 181 ESFDDILYPYRRRPK 195

[Close]
BLAST of Clc11G04240 vs. NCBI nr
Match: XP_004150139.1 (uncharacterized protein LOC101205057 [Cucumis sativus] >KGN61850.1 hypothetical protein Csa_006175 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 7.9e-97
Identity = 178/195 (91.28%), Postives = 184/195 (94.36%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ESDGVQNQAPNLTSNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYIK 180
           E+SQ H+HNKT DSPAFPQPR+YKPSYPAGDE    FKRNA LVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFNDILYPYRRRPK 192
           ES +DILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of Clc11G04240 vs. NCBI nr
Match: XP_038900454.1 (uncharacterized protein LOC120087673 isoform X1 [Benincasa hispida])

HSP 1 Score: 363.6 bits (932), Expect = 1.0e-96
Identity = 180/196 (91.84%), Postives = 184/196 (93.88%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETELEASKEGRSL DFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTG-DSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYI 180
           EHSQ HVHNKT  DSPAFPQPR YKPSYPAGDE    FKRNA LVASGVARNVNR+CNY+
Sbjct: 121 EHSQAHVHNKTEVDSPAFPQPRTYKPSYPAGDEYLNRFKRNAALVASGVARNVNRICNYV 180

Query: 181 KESFNDILYPYRRRPK 192
           KESF+DILYPYRRRPK
Sbjct: 181 KESFDDILYPYRRRPK 196

[Close]
BLAST of Clc11G04240 vs. NCBI nr
Match: XP_008461016.1 (PREDICTED: uncharacterized protein LOC103499721 [Cucumis melo])

HSP 1 Score: 358.2 bits (918), Expect = 4.3e-95
Identity = 176/195 (90.26%), Postives = 181/195 (92.82%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ES GVQNQAPN TSNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVP YI
Sbjct: 1   MDESGGVQNQAPNRTSNGIKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPKYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYIK 180
           E+SQ H+HNKT DSPAFPQPRNYKPSYPAGDE    FKRNA LVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRNYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFNDILYPYRRRPK 192
           ES +DILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of Clc11G04240 vs. NCBI nr
Match: KAG7035057.1 (hypothetical protein SDJN02_01852 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94
Identity = 171/191 (89.53%), Postives = 179/191 (93.72%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ESDG QNQ+PNL SNGAKDS GKSCKGCLYYSSLQKSKS++PTC+GLSKTL+QVPNYI
Sbjct: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETE EASKEGRSLTDFKYACVGYSVYLEKK SSND QNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDEFKRNATLVASGVARNVNRVCNYIKESFN 180
           E SQ H+HNKT DSPAFPQPR+YKPSYPAGDEFKRNA LVASGVARNVNRVCNYIKESF+
Sbjct: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEFKRNAALVASGVARNVNRVCNYIKESFD 180

Query: 181 DILYPYRRRPK 192
           DILYPYRRRPK
Sbjct: 181 DILYPYRRRPK 191

[Close]
BLAST of Clc11G04240 vs. ExPASy TrEMBL
Match: A0A0A0LIW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.8e-97
Identity = 178/195 (91.28%), Postives = 184/195 (94.36%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ESDGVQNQAPNLTSNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVPNYI
Sbjct: 1   MDESDGVQNQAPNLTSNGVKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPNYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYIK 180
           E+SQ H+HNKT DSPAFPQPR+YKPSYPAGDE    FKRNA LVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFNDILYPYRRRPK 192
           ES +DILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of Clc11G04240 vs. ExPASy TrEMBL
Match: A0A1S3CEZ6 (uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.1e-95
Identity = 176/195 (90.26%), Postives = 181/195 (92.82%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ES GVQNQAPN TSNG KDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTLDQVP YI
Sbjct: 1   MDESGGVQNQAPNRTSNGIKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLDQVPKYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYIK 180
           E+SQ H+HNKT DSPAFPQPRNYKPSYPAGDE    FKRNA LVASGVARNVNRVCNY+K
Sbjct: 121 ENSQAHIHNKTEDSPAFPQPRNYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYVK 180

Query: 181 ESFNDILYPYRRRPK 192
           ES +DILYPYRRRPK
Sbjct: 181 ESLDDILYPYRRRPK 195

[Close]
BLAST of Clc11G04240 vs. ExPASy TrEMBL
Match: A0A6J1G5C5 (uncharacterized protein LOC111450972 OS=Cucurbita moschata OX=3662 GN=LOC111450972 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.7e-92
Identity = 171/195 (87.69%), Postives = 179/195 (91.79%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ESDG QNQ+PNL SNGAKDS GKSCKGCLYYSSLQKSKS++PTC+GLSKTL+QVPNYI
Sbjct: 1   MAESDGPQNQSPNLPSNGAKDSIGKSCKGCLYYSSLQKSKSKSPTCVGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETE EASKEGRSLTDFKYACVGYSVYLEKK SSND QNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETEQEASKEGRSLTDFKYACVGYSVYLEKKGSSNDEQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYIK 180
           E SQ H+HNKT DSPAFPQPR+YKPSYPAGDE    FKRNA LVASGVARNVNRVCNYIK
Sbjct: 121 EQSQAHIHNKTEDSPAFPQPRSYKPSYPAGDEYLNRFKRNAALVASGVARNVNRVCNYIK 180

Query: 181 ESFNDILYPYRRRPK 192
           ESF+DILYPYRRRPK
Sbjct: 181 ESFDDILYPYRRRPK 195

[Close]
BLAST of Clc11G04240 vs. ExPASy TrEMBL
Match: A0A6J1JH16 (uncharacterized protein LOC111484301 OS=Cucurbita maxima OX=3661 GN=LOC111484301 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 171/195 (87.69%), Postives = 179/195 (91.79%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYI 60
           M ESDG QN APNLTSNGAKDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTL+QVPNYI
Sbjct: 1   MDESDGGQNPAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVPNYI 60

Query: 61  VGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPA 120
           VGETELEASKEGRSL DFKYACVGYSV+LEKKDS NDVQNKQAELPFCVGLEVLLD RPA
Sbjct: 61  VGETELEASKEGRSLADFKYACVGYSVHLEKKDSPNDVQNKQAELPFCVGLEVLLDKRPA 120

Query: 121 EHSQGHVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRVCNYIK 180
           EHSQ HVH+KT DSPAFPQPRNYKPSY AGDE    F RNA LVASGVARN+N+VC YIK
Sbjct: 121 EHSQAHVHDKTEDSPAFPQPRNYKPSYAAGDEYLNRFTRNAVLVASGVARNMNKVCIYIK 180

Query: 181 ESFNDILYPYRRRPK 192
           ESF+DIL+PYRRRPK
Sbjct: 181 ESFDDILHPYRRRPK 195

[Close]
BLAST of Clc11G04240 vs. ExPASy TrEMBL
Match: A0A6J1CWC7 (uncharacterized protein LOC111015399 OS=Momordica charantia OX=3673 GN=LOC111015399 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91
Identity = 172/200 (86.00%), Postives = 183/200 (91.50%), Query Frame = 0 

Query: 1   MGESDGVQNQAPNLTSN---GAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVP 60
           M ES+G+QNQ PNL+SN   GAKDSKGKSCKGCLYYSSLQKSKS+TPTCIGLSKTL+QVP
Sbjct: 1   MDESEGLQNQTPNLSSNGDGGAKDSKGKSCKGCLYYSSLQKSKSKTPTCIGLSKTLEQVP 60

Query: 61  NYIVGETELEASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDM 120
           NY+VGETELEASKEGR+LTDFKYACVGYSVYLEKKDSS+DV NKQAELPFCVGLEVLLD 
Sbjct: 61  NYVVGETELEASKEGRNLTDFKYACVGYSVYLEKKDSSDDVPNKQAELPFCVGLEVLLDK 120

Query: 121 RPAEHSQG--HVHNKTGDSPAFPQPRNYKPSYPAGDE----FKRNATLVASGVARNVNRV 180
           RPAEHS    H+H+KT DSPAFPQPRNYKPSY AGDE    FKRNATLVASGVARNVNRV
Sbjct: 121 RPAEHSHAHTHIHDKTEDSPAFPQPRNYKPSYSAGDEYLNRFKRNATLVASGVARNVNRV 180

Query: 181 CNYIKESFNDILYPYRRRPK 192
           CNYIKESF+DILYPYRRRPK
Sbjct: 181 CNYIKESFDDILYPYRRRPK 200

[Close]
BLAST of Clc11G04240 vs. TAIR 10
Match: AT3G51100.1 (unknown protein; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 176.0 bits (445), Expect = 2.8e-44
Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 0 

Query: 7   VQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYIVGETEL 66
           V  + P     G+ + KG+SCKG LYYSS  KSKS+ P C+G+ +TL QVP+Y+VG++E 
Sbjct: 13  VMEEKPEQKQRGSLE-KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEA 72

Query: 67  EASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPAEHSQGH 126
           EASKEGR+L DF Y C+GYSVY+  KDSS   Q+ + +LP CVGLE+L D R A  +   
Sbjct: 73  EASKEGRTLADFYYGCLGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSS 132

Query: 127 V-----HNKTGDSPAFPQPRNYKPSYPAG----------DEFKRNATLVASGVARNVNRV 186
           V     + K       PQ +N KP+                F RNA LVA+GV +N+ RV
Sbjct: 133 VPARVQNRKDSREVPVPQHQNNKPASATATATNTENGFLTRFTRNANLVAAGVMKNMKRV 192

Query: 187 CNYIKESFNDILYPYRRRPK 192
            NY+KE+ +D L PYR+RPK
Sbjct: 193 GNYVKETVDDSLDPYRKRPK 211

[Close]
BLAST of Clc11G04240 vs. TAIR 10
Match: AT3G51100.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-37
Identity = 88/200 (44.00%), Postives = 114/200 (57.00%), Query Frame = 0 

Query: 7   VQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYIVGETEL 66
           V  + P     G+ + KG+SCKG LYYSS  KSKS+ P C+G+ +TL Q           
Sbjct: 13  VMEEKPEQKQRGSLE-KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQA---------- 72

Query: 67  EASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPAEHSQGH 126
           EASKEGR+L DF Y C+GYSVY+  KDSS   Q+ + +LP CVGLE+L D R A  +   
Sbjct: 73  EASKEGRTLADFYYGCLGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSS 132

Query: 127 V-----HNKTGDSPAFPQPRNYKPSYPAG----------DEFKRNATLVASGVARNVNRV 186
           V     + K       PQ +N KP+                F RNA LVA+GV +N+ RV
Sbjct: 133 VPARVQNRKDSREVPVPQHQNNKPASATATATNTENGFLTRFTRNANLVAAGVMKNMKRV 192

Query: 187 CNYIKESFNDILYPYRRRPK 192
            NY+KE+ +D L PYR+RPK
Sbjct: 193 GNYVKETVDDSLDPYRKRPK 201

[Close]
BLAST of Clc11G04240 vs. TAIR 10
Match: AT3G51100.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-32
Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 0 

Query: 7   VQNQAPNLTSNGAKDSKGKSCKGCLYYSSLQKSKSETPTCIGLSKTLDQVPNYIVGETEL 66
           V  + P     G+ + KG+SCKG LYYSS  KSKS+ P C+G+ +TL QVP+Y+VG++E 
Sbjct: 13  VMEEKPEQKQRGSLE-KGRSCKGYLYYSSTLKSKSKNPRCVGIPRTLRQVPDYVVGQSEA 72

Query: 67  EASKEGRSLTDFKYACVGYSVYLEKKDSSNDVQNKQAELPFCVGLEVLLDMRPAEHSQGH 126
           EASKEGR+L DF Y C+GYSVY+  KDSS   Q+ + +LP CVGLE+L D R A  +   
Sbjct: 73  EASKEGRTLADFYYGCLGYSVYMTDKDSSAIKQHTKTQLPVCVGLEILADRRAASGNTSS 132

Query: 127 V-----HNKTGDSPAFPQPRNYKPS 147
           V     + K       PQ +N KP+
Sbjct: 133 VPARVQNRKDSREVPVPQHQNNKPA 156

The following BLAST results are available for this feature:
BLAST of Clc11G04240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900455.14.2e-9892.31uncharacterized protein LOC120087673 isoform X2 [Benincasa hispida][more]
XP_004150139.17.9e-9791.28uncharacterized protein LOC101205057 [Cucumis sativus] >KGN61850.1 hypothetical ... [more]
XP_038900454.11.0e-9691.84uncharacterized protein LOC120087673 isoform X1 [Benincasa hispida][more]
XP_008461016.14.3e-9590.26PREDICTED: uncharacterized protein LOC103499721 [Cucumis melo][more]
KAG7035057.16.3e-9489.53hypothetical protein SDJN02_01852 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Clc11G04240 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc11G04240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIW63.8e-9791.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G251500 PE=4 SV=1[more]
A0A1S3CEZ62.1e-9590.26uncharacterized protein LOC103499721 OS=Cucumis melo OX=3656 GN=LOC103499721 PE=... [more]
A0A6J1G5C51.7e-9287.69uncharacterized protein LOC111450972 OS=Cucurbita moschata OX=3662 GN=LOC1114509... [more]
A0A6J1JH161.1e-9187.69uncharacterized protein LOC111484301 OS=Cucurbita maxima OX=3661 GN=LOC111484301... [more]
A0A6J1CWC73.1e-9186.00uncharacterized protein LOC111015399 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
BLAST of Clc11G04240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G51100.12.8e-4447.00unknown protein; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bac... [more]
AT3G51100.33.4e-3744.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G51100.23.3e-3248.28unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..149
NoneNo IPR availablePANTHERPTHR34566:SF2ALTERED INHERITANCE OF MITOCHONDRIA PROTEINcoord: 10..191
NoneNo IPR availablePANTHERPTHR34566ALTERED INHERITANCE OF MITOCHONDRIA PROTEINcoord: 10..191

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G04240.2Clc11G04240.2mRNA