Clc11G04170 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G04170
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP synthase subunit alpha
LocationClcChr11: 3942121 .. 3947049 (-)
RNA-Seq ExpressionClc11G04170
SyntenyClc11G04170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGAGACAAGGGTAATGGATTGGATGGGGAGTGTGGAACTGGACAGGTTTGTCCTGTGCTTTTCAATAACGGAGGCGTTGCAAGGAAAGGGTAGTTCAGTCTTTTAGAAACCCGAAATCACGGGGAGTGTACGATAGAGTGACAGTTCGTTGTGGCTGACCAATGACGTGGCAGCAGAGGAGTGGTCTGTGAGGATCCAATGTAATCTCCATTTTTACATCACAGTGATCAAGTGGATTCCGATCTTTTTGTTGAGAAGTGGGTCCCACTCCATTGTGGCCGAGATTCCCTCGAAGATTCTCCAAATTTTTCTTCCACCAGCCGTCTCTTGTTTGGTAATCGTATAGCAGAGCCCTTTGCTTTACTTTTCTTTCTTTTATCTTTTTTAATCAAATTTTAAATATCCAATAAAATTAATAATAATGATTTATTGTTTATAAAATAATTATCTATTTATCAACTACAGTCCTACATATATACTTTTGATTACAACTCAAAATTTTAATTCTCTCTACCATACTTATTATTAGATTAAAAAGATTTGAAGCAGATGCAAACTCCATTTAATTCACCCTAATTAATTCAACCCTAAATTATGCAAAATACTTTTAAATTTTGTATTTAGTGTCAAAAATATCTCTTAATACTCTTAAACTTTTAAAAAGATTTCAAAAATACTTTTACCATTAATTTTGGATGGAAATGATTGGTGTTTTGTTTAAAAAATACCCTTGAACGTAGAGAAAAAAGTTTACTTTTACACCTAATGAATGAATAGAAACGGATAATATCTCATTGCAAAAATACCTCATTGACTTCCTTCCTAAATGTTAAGAGGTTAAATCCCCATCTCCTCATAGTTGTACTAAAAAAAGAGTATTAATGCAACTTTTGAAAATTTAAGAATGTTATTTAAACAAGTATTAACTGTTTGTGTTCATATATTAACAATTAGGGTATTTTTGAATTTTTTTTTTCTTTAAGTTTAAGCATACGAAAGTTTAAAAGGCATTTTTAAAAATACATAGAGAATAACATAGGAAGAATACCACTAGAATAACAGTAATCGTTCCGCGTATTGATGAAGAAATAGACAACATAATATAAAGGAAAAGGGTTGGACACGTGTACACACAGTACTAGGAATCCAATAACAAACTAATACAACCAAAAGAGAGATAAATAGCCTAGAAAACTCTTAATGAAATGTAATGTTTTATCATCCCGCAAGTTGAACCAAAGGACGAAGGACGAAAAGCTTGGTCCTCAAATTACAAAAACATTGAGAAGGAACCAGAGGTGTAACATGAGAGGAGGAGGTAAGAGGATTGAGGTTGGGAGGGTTGATATTTGAAAGAGGTTCATGGACATGTGGAAGAAAGGAAGAAGAAGATCTTTTGCCTAACAACATTAAAGCAATAAAACATTCGTGGATGTCTGTTCAGAATTTACATCTAAAGCCAAAATTGTTGTAGTGGTGACTCTATTACCATAAAATATATAGAAAATAACATAGGAAGAACACCACTAGAATAGTAATCCTTTAGTACATTGACGAAGAAGCAGACAATAAAATATAAAGGGAAAAGATTGGACACGTGTACACACGGTATTGGAATCCCATAACAAACTAATACAACCAAAATAAAGATAAATAGCCCGTAAAACTCTTAATGAAAAGTAATGTTTTATCATTTTTGAAAAAAAAAGAACACCAATGATTTTCAAAAATCCATAACTAACAAGAGTATTTATATATATATATTTTTTTTAAAGTTTAAAGGTATTTTTGAAGCTTTTGAAATTTCAAAGATGTTTTTGACACAAAGTACCAACTTTAAGAATGTTTTGTATAATTTAACCTTAATTAAAATGTATCATCAATTTTTTAAAGTAAAATTAAAAATTTAGTTCCTAAACATTCATGTTTGTATTTAATAAACTTTTGAACTCTAAACAATATTTAATAAACTTTTAAACTTTCACTTTAGTTAAAAATTACAAAAATGTCTCCAAAATTTTTATTTGATCTTTAATAAATTATTAGCATATTAAATATTTTTAAAATTCAATACATTTATTGAAATATAAATTTAATTTTGTGTGTAATAAGTATATTAAACTTTTTAATTATGTATGTAAAAGAATGTTGAATAAGTTAAAAACTATTAAATAATTTTGAGATAAACTTTGAATGTTTGGATATTGAACTTGGTAATTTAACCATTATTTTATTATCTATAATATAATTAAATTGGGATGATTTACTTCTTCTTTCTCTCTCTCTCTCTTTCCAAAAAGCTACAAAATCACTTCTTCTTTTTTTTTTTTTTTTTTTTGAAGACTTCAACAATATTTGGCCTTTAAGATGGTGTTTAAAAAAATTAAAATATTTTTTTATAATTGAACTAATTTTTGTCCTAATGGATATTTTGTTTTTAGTTTTAAATTTAATTAAATTAACACCTTTAATTTCAACTAATTTGGTGTGATAATCTTTTTAATCTTTTAAATTAAATTTATAATCACTACGAGCCTTTGTTTTATTATTTATTATTTTTTAAGTCCACCAAAGTGAAGAGCCAAACAAGAAAGTCACCTACAAGACGCATTCCTCCTTAAAAAAACAAGACATTCAATCGTAGAAAGAACCAACAAAAATTATTAAAAAAATGGAAGAAGGAATATTTGCATCCAAAATATTTCAAAAACAACCTCACGAGTAAGCTTGAGAACAACTTCATTATATAATTTTTAGGGTTGTTTTCAAAATTTGTGCGGTGTTTAAAAAAATTTAAAATATTTTATATGATGAACTAAGTTTTTGTCTTAATACATCCTTTTCTTTTTTAACTTTAAATTTGTTTTCAATTGAATCAATTAACGCCTTCAATTTCGACTAATTTGGTTTGATAACCTTTTAATTTTTTAAAATTAAACTTATAATCAATATGAACGTTTGTTTTATTATTTATTAGAGATTTTTATTTGAAATTTGACGATGAATCCATTTGTTTTGTTATGAAAGAAGAAAAAATCAAACCAAGTTTTAAACAACTATGTTCAAATTTTAAATTATAAAAAACAAGAGTTTCCTATTTTTAGAATTTGCCTATAAATTTAAATGTCTATTTAGGAAATAAAAATTATTATAAAAAAAGTGTGAGAAAGGAAGCATAATTTTAAAGAACGAAAGACTAAATAATTATAAAATGAGAATTTTTTTTTAATATGTTTTATATTTATAGAAAATTTTAAATTCTTAAGACTGGCTTACAAAATTCAAGTACCTTTTTATAATAAAAAAAGGTGTTTATCTTTTAATTTTAACTATAATTCAAATGCTATTATAAAAAAATGGCGAGAAAATAGAAACCTCAAAAATTAAAAAACAAACAGTTATTAAACAGGATTTATAATTTTCTAATATATATTATTTTAAAAAAACATAAATTTATAATATATTAATTGTTAAGCTTGTCTTTAACGAAAATATCTATTTAAAAAAACATTTGAAGAAAAGAGCCAAAGTTTGACTACTAGTATGAACAATAGAATAAAAAAAAGTTCAACCAATACGGGCAAACTTCAATTAGCATATAATTCGTACAATCAATCTCAAACATATTTAGGTTAAATTTACTCATCTTATATATATATATAATTTTGCGTAAAATACCTTCAAATTTTTAAAAGTTTCAAAAATACATTTGAACTTTCAAAAATAGTTAAAAAAATATCTTTACCGTTAGTTTTGGATGAAATTCGTTAATGTTTTGTTTAAAAGATACTTAATACTCTTACTGCTAGTATATGAACACAAATCGTTAATATTTGTTTTAAATATCTTTGAACTTTTAAAAGTTAGATTAATACTATTAACTTTGTAAAAAATAAAGTTTAAAATCTCACATAAATCTCACATATCCCTTTAACTTACCAAAACTATAAATAGCCAAGTACAAGAAGAATGTATTTGCCTCTTAACACACTCAACTACTGATGTATAATCTTGTCAAAACATACAAGTTATAAGGTTTCCTTGGTACTTTCATTATTCTCTTTCTCTTTGTTATAATCTATATATCTTAACTGAAGGAGGCAATTTTTTAATGAGATAAATCAAATGTTAAACAGGTAACAAGAAGGAGAGTAAGAGAGGAGAAAGAAAGAAAGAAAGAAAAAAAAAAAAAGATAAGTGTTAGGTCGTAAGTTGAATTAGGAGAGAGAGGAAATGGAAGAGGTGTAAATCAACGGAAGGAGCATTTTTTTAATTTTTATTTATTTATTTATTTATTTTTCTTATGGTACTAATTCAACTTTTGAAAGTTTATATTTATGCAACAAGATATTCATTGTTTTTATTCATATATTAATAGTAAGCGTACTTTTGAATATTTAATTTAAGTTTAAAGGTATTTTTGAAACTCTTGAAAGTATAATGGTATTTTTTACACAAAGTGCAAAATTCAAAGGCATTTTGTAATTTAACTTATATATATTAAAAAATAAAACTTCAGCTTACTTTTACACGAATTTTCAAGTGGATGAGATCAGTCGAGTGGTCTCAGTTAGAGATGGGATTGCGCGTGTTTACAGATTGAAGGAGATTCAAGTTAGGAAATTGGTGGAATTTGCCAGTGGCGTAAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAAGAGATCTTGTCAAGCGCACTGGATCGATTGTGGATGTTCCTGCGGAAAAGGCTATGCTCGGGCGTGTGGTCGATGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACATGTCGAAGTGAAAGCCTCTGGAATTGTTGAATGTAAATCAGTGCACGAGCGCCAATGCAAACAGGGTTAA

mRNA sequence

ATGTTGGGAGACAAGGGTAATGGATTGGATGGGGAGTGTGGAACTGGACAGAGTGACAGTTCGTTGTGGCTGACCAATGACGTGGCAGCAGAGGAGTGGTCTGTGAGGATCCAATGTAATCTCCATTTTTACATCACAGTGATCAAGTGGATTCCGATCTTTTTGTTGAGAAGTGGGTCCCACTCCATTGTGGCCGAGATTCCCTCGAAGATTCTCCAAATTTTTCTTCCACCAGCCGTCTCTTGTTTGTTGAACCAAAGGACGAAGGACGAAAAGCTTGGTCCTCAAATTACAAAAACATTGAGAAGGAACCAGAGGTGTAACATGAGAGGAGGAGTGGATGAGATCAGTCGAGTGGTCTCAGTTAGAGATGGGATTGCGCGTGTTTACAGATTGAAGGAGATTCAAGTTAGGAAATTGGTGGAATTTGCCAGTGGCGTAAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAAGAGATCTTGTCAAGCGCACTGGATCGATTGTGGATGTTCCTGCGGAAAAGGCTATGCTCGGGCGTGTGGTCGATGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACATGTCGAAGTGAAAGCCTCTGGAATTGTTGAATGTAAATCAGTGCACGAGCGCCAATGCAAACAGGGTTAA

Coding sequence (CDS)

ATGTTGGGAGACAAGGGTAATGGATTGGATGGGGAGTGTGGAACTGGACAGAGTGACAGTTCGTTGTGGCTGACCAATGACGTGGCAGCAGAGGAGTGGTCTGTGAGGATCCAATGTAATCTCCATTTTTACATCACAGTGATCAAGTGGATTCCGATCTTTTTGTTGAGAAGTGGGTCCCACTCCATTGTGGCCGAGATTCCCTCGAAGATTCTCCAAATTTTTCTTCCACCAGCCGTCTCTTGTTTGTTGAACCAAAGGACGAAGGACGAAAAGCTTGGTCCTCAAATTACAAAAACATTGAGAAGGAACCAGAGGTGTAACATGAGAGGAGGAGTGGATGAGATCAGTCGAGTGGTCTCAGTTAGAGATGGGATTGCGCGTGTTTACAGATTGAAGGAGATTCAAGTTAGGAAATTGGTGGAATTTGCCAGTGGCGTAAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAAGAGATCTTGTCAAGCGCACTGGATCGATTGTGGATGTTCCTGCGGAAAAGGCTATGCTCGGGCGTGTGGTCGATGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACATGTCGAAGTGAAAGCCTCTGGAATTGTTGAATGTAAATCAGTGCACGAGCGCCAATGCAAACAGGGTTAA

Protein sequence

MLGDKGNGLDGECGTGQSDSSLWLTNDVAAEEWSVRIQCNLHFYITVIKWIPIFLLRSGSHSIVAEIPSKILQIFLPPAVSCLLNQRTKDEKLGPQITKTLRRNQRCNMRGGVDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKERDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHERQCKQG
Homology
[Close]
BLAST of Clc11G04170 vs. NCBI nr
Match: TXG75638.1 (hypothetical protein E1A91_1Z030300v1, partial [Gossypium mustelinum])

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ R++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 31  VDEIGRVVSVGDGIARVYGLNEIQAREMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 90

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 91  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 150

[Close]
BLAST of Clc11G04170 vs. NCBI nr
Match: AHX81374.1 (ATP synthase F1 subunit 1 [Couepia guianensis])

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY LKEIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. NCBI nr
Match: YP_009565392.1 (ATPase subunit 1 [Morus notabilis] >QBB08749.1 ATPase subunit 1 [Morus notabilis])

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY LKEIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. NCBI nr
Match: AHX81372.1 (ATP synthase F1 subunit 1 [Chrysobalanus icaco])

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY LKEIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. NCBI nr
Match: YP_009913606.1 (ATPase subunit 1 [Luffa acutangula] >YP_009913634.1 ATPase subunit 1 [Luffa acutangula] >QLJ92999.1 ATPase subunit 1 [Luffa acutangula] >QLJ93000.1 ATPase subunit 1 [Luffa acutangula])

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY LKEIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy Swiss-Prot
Match: Q06735 (ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-50
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy Swiss-Prot
Match: P18260 (ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-50
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy Swiss-Prot
Match: P24459 (ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-50
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy Swiss-Prot
Match: Q01915 (ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-50
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy Swiss-Prot
Match: P05493 (ATP synthase subunit alpha, mitochondrial OS=Pisum sativum OX=3888 GN=ATPA PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 4.2e-50
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ  +LVEFASGVKGIALNLENENVGIVVFGSDT+IKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLNEIQAGELVEFASGVKGIALNLENENVGIVVFGSDTSIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy TrEMBL
Match: A0A5B7BC00 (ATP synthase subunit alpha OS=Davidia involucrata OX=16924 GN=Din_035808 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERRHVEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRHVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy TrEMBL
Match: A0A5C7J2V6 (ATP synthase subunit alpha (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_1Z030300v1 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY L EIQ R++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 31  VDEIGRVVSVGDGIARVYGLNEIQAREMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 90

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 91  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 150

[Close]
BLAST of Clc11G04170 vs. ExPASy TrEMBL
Match: A0A7D5Y002 (ATP synthase subunit alpha OS=Luffa acutangula OX=56866 GN=atp1-1 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY LKEIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. ExPASy TrEMBL
Match: A1XIU3 (ATP synthase subunit alpha (Fragment) OS=Oxalis sp. Qiu 94028 OX=374146 GN=atp1 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY LKEIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 3   VDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 62

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 63  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 122

[Close]
BLAST of Clc11G04170 vs. ExPASy TrEMBL
Match: A0A023T0Y9 (ATP synthase subunit alpha OS=Hirtella racemosa OX=1125932 GN=atp1 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIARVY LKEIQ  ++VEFASGVKGIALNLENENVGIVVFGSDTAIKE
Sbjct: 27  VDEIGRVVSVGDGIARVYGLKEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDALGVPIDGRGALSDHERR VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 188.0 bits (476), Expect = 9.0e-48
Identity = 104/151 (68.87%), Postives = 119/151 (78.81%), Query Frame = 0 

Query: 85  NQRTKDEKLGPQITKTLR---RNQRCNMRGGVDEISRVVSVRDGIARVYRLKEIQVRKLV 144
           N+   +E+   ++T       RN   N +  VDEI RVVSV DGIA+VY L EIQ  ++V
Sbjct: 268 NESRLEERRAAELTNLFESRIRNFYANFQ--VDEIGRVVSVGDGIAQVYGLNEIQAGEMV 327

Query: 145 EFASGVKGIALNLENENVGIVVFGSDTAIKERDLVKRTGSIVDVPAEKAMLGRVVDALGV 204
            FA+GVKG+ALNLENENVGIVVFG DTAIKE DLVKRTGSIVDVPA KAMLGRVVDA+GV
Sbjct: 328 LFANGVKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGV 387

Query: 205 PIDGRGALSDHERRHVEVKASGIVECKSVHE 233
           PIDG+GALSDHE+R VEVKA GI+E KSVHE
Sbjct: 388 PIDGKGALSDHEQRRVEVKAPGILERKSVHE 416

[Close]
BLAST of Clc11G04170 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-47
Identity = 98/120 (81.67%), Postives = 107/120 (89.17%), Query Frame = 0 

Query: 113 VDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNLENENVGIVVFGSDTAIKE 172
           VDEI RVVSV DGIA+VY L EIQ  ++V FA+GVKG+ALNLENENVGIVVFG DTAIKE
Sbjct: 27  VDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMALNLENENVGIVVFGGDTAIKE 86

Query: 173 RDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHERRHVEVKASGIVECKSVHE 232
            DLVKRTGSIVDVPA KAMLGRVVDA+GVPIDG+GALSDHE+R VEVKA GI+E KSVHE
Sbjct: 87  GDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRRVEVKAPGILERKSVHE 146

[Close]
BLAST of Clc11G04170 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 112.1 bits (279), Expect = 6.3e-25
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0 

Query: 96  QITKTLR-RNQRCNMRGGVDEISRVVSVRDGIARVYRLKEIQVRKLVEFASGVKGIALNL 155
           +I+  +R R ++ N    +     V+ V DGIAR+Y L E+   +LVEF  G  GIALNL
Sbjct: 8   EISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNL 67

Query: 156 ENENVGIVVFGSDTAIKERDLVKRTGSIVDVPAEKAMLGRVVDALGVPIDGRGALSDHER 215
           E+ NVG+V+ G    I+E   VK TG I  +P  +A LGRV++AL  PIDGRG +S  E 
Sbjct: 68  ESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASES 127

Query: 216 RHVEVKASGIVECKSVHE 233
           R +E  A GI+  +SV+E
Sbjct: 128 RLIESPAPGIISRRSVYE 145

The following BLAST results are available for this feature:
BLAST of Clc11G04170 vs. NCBI nr
Match NameE-valueIdentityDescription
TXG75638.13.8e-4889.17hypothetical protein E1A91_1Z030300v1, partial [Gossypium mustelinum][more]
AHX81374.16.5e-4889.17ATP synthase F1 subunit 1 [Couepia guianensis][more]
YP_009565392.16.5e-4889.17ATPase subunit 1 [Morus notabilis] >QBB08749.1 ATPase subunit 1 [Morus notabilis... [more]
AHX81372.16.5e-4889.17ATP synthase F1 subunit 1 [Chrysobalanus icaco][more]
YP_009913606.16.5e-4889.17ATPase subunit 1 [Luffa acutangula] >YP_009913634.1 ATPase subunit 1 [Luffa acut... [more]
BLAST of Clc11G04170 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q067353.2e-5088.33ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=... [more]
P182603.2e-5088.33ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA P... [more]
P244593.2e-5088.33ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA ... [more]
Q019153.2e-5088.33ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV... [more]
P054934.2e-5088.33ATP synthase subunit alpha, mitochondrial OS=Pisum sativum OX=3888 GN=ATPA PE=3 ... [more]
BLAST of Clc11G04170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5B7BC001.4e-4889.17ATP synthase subunit alpha OS=Davidia involucrata OX=16924 GN=Din_035808 PE=3 SV... [more]
A0A5C7J2V61.8e-4889.17ATP synthase subunit alpha (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_... [more]
A0A7D5Y0023.1e-4889.17ATP synthase subunit alpha OS=Luffa acutangula OX=56866 GN=atp1-1 PE=3 SV=1[more]
A1XIU33.1e-4889.17ATP synthase subunit alpha (Fragment) OS=Oxalis sp. Qiu 94028 OX=374146 GN=atp1 ... [more]
A0A023T0Y93.1e-4889.17ATP synthase subunit alpha OS=Hirtella racemosa OX=1125932 GN=atp1 PE=3 SV=1[more]
BLAST of Clc11G04170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G07698.19.0e-4868.87ATPase, F1 complex, alpha subunit protein [more]
ATMG01190.11.5e-4781.67ATP synthase subunit 1 [more]
ATCG00120.16.3e-2544.93ATP synthase subunit alpha [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 183..234
e-value: 2.1E-8
score: 35.9
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 115..180
e-value: 4.6E-15
score: 55.9
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyGENE3D2.40.30.20coord: 114..182
e-value: 1.5E-25
score: 90.8
NoneNo IPR availablePANTHERPTHR48082:SF2ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIALcoord: 109..232
NoneNo IPR availablePANTHERPTHR48082ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIALcoord: 109..232
NoneNo IPR availableCDDcd18116ATP-synt_F1_alpha_Ncoord: 115..180
e-value: 3.60897E-26
score: 94.8276
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilySUPERFAMILY50615N-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 105..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G04170.1Clc11G04170.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0046034 ATP metabolic process
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism