Clc11G03930 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G03930
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	auxin-responsive protein SAUR21-like
Location	ClcChr11: 3757969 .. 3760570 (-)
RNA-Seq Expression	Clc11G03930
Synteny	Clc11G03930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTGGATGGAAAAATCTGAAAAATCTGAAAATGTCTTGGAAAGACAGCACCAAGAAGCATTAAGACGAGCAATCTCAAATCGATCCCTCCAAGCAGTGACTTTTCATGAAAAACGCGCCGGTTCCTTCCAAACCATATTTCAGCTAATAATGCTTTGACAACAATAGACCAAATCAAACGTGACCTAGACTTCAATGATGGTCCTACCAAAACCTGCTGTAGAAGTGAACTTTGCTGTTGTGAAGAAAACTGCTTACCAAGACTCATACCAAGAAGCGTACTATGGCCCTGTTGTTGAACATGCTGGAGACGCTGCAAGAACTTCTCCCTCTGATCTGGTGCCTATTTCAGCTCCTCCACAAAAATGCCCTCCTTCATTCGGATTTTGAAGGAATCTAAATTATTACACTAGTCCAGACATATGAGACTTCAAAGGATGTTTACAACATTTCGAATCATATCTCTTGCTTCAAAAATTTTTTCTAAAGACTACTTAGGTACCATTGAAGTGGTTCATTCTAATGGTTGGAGTGTTACATTTAGAAGTTAATATGTTATCCTATTGTGGGGGATAAATATTTTGTTATTCTTAAACACGTGTACAAGGCATTATTTATCTTGAAGAAACAGCTATAGATAAATTATTTCATTTTTTACAATGAGTTTTAATAACAAAGTCACGTAAAAATCTACATGCACGATAGGATCAATGTTGAGATATTTACGACCTAAATCTTTATATCTAGAGGCTCCACCTGCATTTTGTTATATGAATAGAATATGGTTGTCTTATTTGAATTTGAACTTTTTTGTATGTGAAGGTTATGTATCAGTTCATTTTTTAAGTGAGTACAACAAATATCCACTTTTGCAACTTGGATAGCAATGAACAGACGAGTATCAAAGAATAACCAAAAAAAACATGACATGATACTGAAAATCTATCTGTATTATCTTTGGTAGGAAATTTACTAACAAAGGAACTCATCTGAATTCCAAAAGGCTTGAAATTGTATTTATACACAACATTCAAGTAGGAAATAGAAAGAAAACAAGTTAGGAGAAAAAAAAAATATGTTAAGAATTGGTTAATGGTTATTTTGTCATATTCAAAGATTGTTTTAATCTAGAAGTGAGATCAATGAAGCAATCCCTGCAAGGAATTGTAAAACCTTGTGCATGATGGAAACCGAAACCTTCTTTTGCTCAGTTGAGTATTTGTTGGAAAAAATGATGGTTGAAGTATGAAATGGGAACCACAAATAGTTTCCTTTGGATATTTATACTACAAAATAACCTCTAGGAACAATATCTGATTTCTTCATGTCAAAACCCGCTTGCATCTTTAGAATGTTTGGCATTAGGAATCAGAGATGATGGCCAACAAATCGCCATTGTTAAATTTTATTTGCAGTGGTCGAAAGACTAAACAGATCTGAAGTTTAAACTTGATCGGTGTCAAAGAAGTTGGAAGTAGAATCATGAAACATCTAGTATTTGAAACTCATTTAGGATCTACATTTATAGAGTCATGAAGAAATAAATTTCCTGAGCATTTCTAAGGAGCATCTAAAAGTGGGCTACCTAGACAACTTAGAGGACCTACTTACCATGAGTCCATGACTTTGTTAGCTCACAAGAATCTTCCATTTCCATCTCATCCTTTGTCTTGGCTCCATGTGTGTTGGATATGTATGCCACAACTTGCTAAACTTCAGGCCCAATTGTAATTAAATTTCCAAACCACACCATGCTTGTTCTAGTGGAATAGCACATGAAAACTGATGGCTTGTAAAAGACGAGCCAACATATCCATGTGATTGGACCTCCTTGCAAGAGGAAATTGCTTCATCAATGGACCCAGCTTCTAGGTAAGGGAAGCGACTTCACATGGACCGATGCATTAAATCATATCATATCAGCACCTCATATTTCATCTGATTCACAGGTTGGTTAGGTCCACTAATGGAGCACTTAATGAGAATTGGAGAGTCACATGGTATGTTGCTACTCATTTGACAAACTTGATGAAACTTTCTTGGCCTCTTTTTATTGGAAAAAGTGGGACCAGTCAGAAAGCAAATGAAATTCTAATGCATAGAACAAAACCATGTGAGCCTTTGGAGAAGTAGGTCCTTATCTGCTATACTCTTTTTGTTCTCTCCAGTTCCTAGTCTATAAATACACATAAGAATGAAGCCATTCTCATCCAACAAGTACTCTATTTCCTACATCAAATTCCATACCAAGCAAAACACCATTCAAACTCACTCACCCCTCTCTTGTTTAGAGTAAATTACAGATATGGGAATCCGTTTGCCATCAATTCTTCTTAATGCCAAGCAAATTCTGAAAATGCAAGCTATGTCGGCCAGAAATCAATCTGACGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGAGATTCAAAGGACGAAATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTCGTAGATCTGCTTAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGTGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACGTCATGA

mRNA sequence

ATGTCTTGGATGGAAAAATCTGAAAAATCTGAAAATGTCTTGGAAAGACAGCACCAAGAAGCATTAAGACGAGCAATCTCAAATCGATCCCTCCAAGCAGTGACTTTTCATGAAAAACGCGCCGAAGTGAACTTTGCTGTTGTGAAGAAAACTGCTTACCAAGACTCATACCAAGAAGCGTACTATGGCCCTGTTGTTGAACATGCTGGAGACGCTGCAAGAACTTCTCCCTCTGATCTGGAACAATATCTGATTTCTTCATGTCAAAACCCGCTTGCATCTTTAGAATGTTTGGCATTAGGAATCAGAGATGATGGCCAACAAATCGCCATTCCAACATATCCATGTGATTGGACCTCCTTGCAAGAGGAAATTGCTTCATCAATGGACCCAGCTTCTAGGTCCACTAATGGAGCACTTAATGAGAATTGGAGAGTCACATGGTATGTTGCTACTCATTTGACAAACTTGATGAAACTTTCTTGGCCTCTTTTTATTGGAAAAAGTGGGACCAGTCAGAAAGCAAATGAAATTCTAATGCATAGAACAAAACCATATATGGGAATCCGTTTGCCATCAATTCTTCTTAATGCCAAGCAAATTCTGAAAATGCAAGCTATGTCGGCCAGAAATCAATCTGACGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGAGATTCAAAGGACGAAATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTCGTAGATCTGCTTAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGTGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACGTCATGA

Coding sequence (CDS)

ATGTCTTGGATGGAAAAATCTGAAAAATCTGAAAATGTCTTGGAAAGACAGCACCAAGAAGCATTAAGACGAGCAATCTCAAATCGATCCCTCCAAGCAGTGACTTTTCATGAAAAACGCGCCGAAGTGAACTTTGCTGTTGTGAAGAAAACTGCTTACCAAGACTCATACCAAGAAGCGTACTATGGCCCTGTTGTTGAACATGCTGGAGACGCTGCAAGAACTTCTCCCTCTGATCTGGAACAATATCTGATTTCTTCATGTCAAAACCCGCTTGCATCTTTAGAATGTTTGGCATTAGGAATCAGAGATGATGGCCAACAAATCGCCATTCCAACATATCCATGTGATTGGACCTCCTTGCAAGAGGAAATTGCTTCATCAATGGACCCAGCTTCTAGGTCCACTAATGGAGCACTTAATGAGAATTGGAGAGTCACATGGTATGTTGCTACTCATTTGACAAACTTGATGAAACTTTCTTGGCCTCTTTTTATTGGAAAAAGTGGGACCAGTCAGAAAGCAAATGAAATTCTAATGCATAGAACAAAACCATATATGGGAATCCGTTTGCCATCAATTCTTCTTAATGCCAAGCAAATTCTGAAAATGCAAGCTATGTCGGCCAGAAATCAATCTGACGTTCCCAAAGGCCATATTGCAGTTTATGTGGGAGAGATTCAAAGGACGAAATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTCGTAGATCTGCTTAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGTGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACGTCATGA

Protein sequence

MSWMEKSEKSENVLERQHQEALRRAISNRSLQAVTFHEKRAEVNFAVVKKTAYQDSYQEAYYGPVVEHAGDAARTSPSDLEQYLISSCQNPLASLECLALGIRDDGQQIAIPTYPCDWTSLQEEIASSMDPASRSTNGALNENWRVTWYVATHLTNLMKLSWPLFIGKSGTSQKANEILMHRTKPYMGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

Homology

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BLAST of Clc11G03930 vs. NCBI nr
Match: XP_011649278.1 (auxin-responsive protein SAUR21 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.5e-46
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61  LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03930 vs. NCBI nr
Match: XP_038901157.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLN+SEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61  LLNKSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03930 vs. NCBI nr
Match: XP_038901158.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-45
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGHIAVYVGEIQR +FV+PISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVIPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHPMGGLTIPCRED FINLTAR+HTS
Sbjct: 61  LLNRSEEEFGFCHPMGGLTIPCREDTFINLTARMHTS 97

[Close]

BLAST of Clc11G03930 vs. NCBI nr
Match: XP_022146171.1 (auxin-responsive protein SAUR21-like [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-45
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQILKMQAMSARNQSDVPKG+IAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Sbjct: 61  LLNRSEEEFGFCHPMGGLTIPCREDAFINLTSRLHTS 97

[Close]

BLAST of Clc11G03930 vs. NCBI nr
Match: XP_016902145.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045683.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99601.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-45
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Sbjct: 61  LLNRSEEEFGFCHPTGGLTIPCREDAFINLTAKLHTS 97

[Close]

BLAST of Clc11G03930 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.1e-23
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 195 LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEE 254
           LL AK+IL   + SA   S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEE
Sbjct: 7   LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 255 FGFCHPMGGLTIPCREDAFINLTARLH 282
           FGF HPMGGLTIPC ED FIN+T+RLH
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Clc11G03930 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.9e-23
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 195 LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEE 254
           LL AK+IL   + S    S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEE
Sbjct: 7   LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 255 FGFCHPMGGLTIPCREDAFINLTARL 281
           FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67  FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Clc11G03930 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 195 LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEE 254
           LL AK+IL     SA      PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEE
Sbjct: 7   LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 255 FGFCHPMGGLTIPCREDAFINLTARL 281
           FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Clc11G03930 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-22
Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 195 LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEE 254
           LL AK+IL     +A   S  PKG +AVYVGE Q+ +++VPISYL  PSF  LL++SEEE
Sbjct: 7   LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 255 FGFCHPMGGLTIPCREDAFINLTAR 280
           FGF HPMGGLTIPC ED FIN+T+R
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Clc11G03930 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-22
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 195 LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEE 254
           LL AK+IL   + S    S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEE
Sbjct: 7   LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 255 FGFCHPMGGLTIPCREDAFINLTARL 281
           FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Clc11G03930 vs. ExPASy TrEMBL
Match: A0A5A7TQ57 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001750 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-45
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Sbjct: 61  LLNRSEEEFGFCHPTGGLTIPCREDAFINLTAKLHTS 97

[Close]

BLAST of Clc11G03930 vs. ExPASy TrEMBL
Match: A0A6J1CYI0 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015450 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-45
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQILKMQAMSARNQSDVPKG+IAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Sbjct: 61  LLNRSEEEFGFCHPMGGLTIPCREDAFINLTSRLHTS 97

[Close]

BLAST of Clc11G03930 vs. ExPASy TrEMBL
Match: A0A1S4E2E4 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-45
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Sbjct: 61  LLNRSEEEFGFCHPTGGLTIPCREDAFINLTAKLHTS 97

[Close]

BLAST of Clc11G03930 vs. ExPASy TrEMBL
Match: A0A5D3BIN4 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001760 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.0e-45
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKG+IAVYVGEIQR +FVVPISYLKHPSFVD
Sbjct: 1   MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LL RSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61  LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03930 vs. ExPASy TrEMBL
Match: A0A0A0LM74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258830 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.0e-45
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVD 246
           MGIRLPSILLNAKQILKMQAMSARNQ DVPKGHIAVYVGEIQR +FVVPISYLK+PSFVD
Sbjct: 1   MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 247 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
           LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61  LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Clc11G03930 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-26
Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILK----MQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHP 246
           M IR+P +L ++KQIL+    + + S+ +  DVPKG++AVYVGE    +FVVP+SYL  P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 247 SFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH 282
           SF DLL ++EEEFGF HPMGGLTIPC E+ FI+L +R +
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Clc11G03930 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-26
Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGE-IQRTKFVVPISYLKHPSFV 246
           M IR+  +L ++KQ+LK  + S+ N + +PKGH+AVYVGE +Q+ +FVVP++YL HP F 
Sbjct: 1   MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 247 DLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 284
            LL ++EEEFGF HPMGGLTIPC E  FI+L +RL TS
Sbjct: 61  KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Clc11G03930 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 7.5e-25
Identity = 55/101 (54.46%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 187 MGIRLPSILLNAKQILKMQAMSARNQSD------VPKGHIAVYVG---EIQRTKFVVPIS 246
           MG+   +I    KQILK+ +++ RN++       VPKGH+AVYVG   E+++ +FVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 247 YLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTA 279
           +L HPSF + L+R+EEEFGF HPMGGLTIPCRE+ F++L A
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101

[Close]

BLAST of Clc11G03930 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-24
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 195 LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEE 254
           LL AK+IL   + SA   S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEE
Sbjct: 7   LLVAKKIL---SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 255 FGFCHPMGGLTIPCREDAFINLTARLH 282
           FGF HPMGGLTIPC ED FIN+T+RLH
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Clc11G03930 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-24
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 195 LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEE 254
           LL AK+IL   + S    S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEE
Sbjct: 7   LLGAKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 255 FGFCHPMGGLTIPCREDAFINLTARL 281
           FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67  FGFAHPMGGLTIPCPEDTFINVTSRL 89

The following BLAST results are available for this feature:

BLAST of Clc11G03930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649278.1	2.5e-46	96.91	auxin-responsive protein SAUR21 [Cucumis sativus]	[more]
XP_038901157.1	5.5e-46	95.88	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_038901158.1	1.6e-45	93.81	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_022146171.1	2.1e-45	95.88	auxin-responsive protein SAUR21-like [Momordica charantia]	[more]
XP_016902145.1	2.1e-45	95.88	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045683.1 aux...	[more]

BLAST of Clc11G03930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF6	3.1e-23	63.22	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FJG1	8.9e-23	61.63	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	1.2e-22	61.63	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FJG0	1.5e-22	62.35	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FK62	2.0e-22	61.63	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]

BLAST of Clc11G03930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQ57	1.0e-45	95.88	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1CYI0	1.0e-45	95.88	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A1S4E2E4	1.0e-45	95.88	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=...	[more]
A0A5D3BIN4	3.0e-45	94.85	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LM74	3.0e-45	95.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258830 PE=3 SV=1	[more]

BLAST of Clc11G03930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	1.8e-26	55.56	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.3e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	7.5e-25	54.46	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	2.2e-24	63.22	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	6.3e-24	61.63	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 187..282
None	No IPR available	PANTHER	PTHR31929:SF51	AUXIN-RESPONSIVE PROTEIN SAUR22-LIKE	coord: 187..282
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 198..279 e-value: 4.1E-24 score: 84.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G03930.2	Clc11G03930.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin