
Clc11G03210 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAGACTAAGGTATCAGCTGCCACAGTTTTCGACAATCGGATCCATTACAACACTCCCACTGTCCAAATCACCACCATTCGACTTAACGGGGATAACTTTCTTTGTTGGTCCCAGAGTGTTCGGATGTATATTCGTGGCCAAGGGAAGATAGGTTATCTCACCAGAGAAAAAATTGCTCCAAGTCCGGATGACCCATTAATTACTGTGTGGGACGTGGAAAACTCCATGGTTATGACATGACTCGTCAATTCTATGGTGGAAGACATCAGTAGTAATTACATGTGCTACACTGCTGCTAAGGAATTGTGGGATGGTGTGACTCAAATGTATTCAGACTTGGGTAACCAGTCACAAGTGTTCGAGCTGAATCTTAAGTTGGGTGATATACAACAAGGAGGCAACTCAGTTACACAATAGTTTCACTCTCTGAAGAGGATGTGGCAACAACTTGATCTATTTGATACGTATGAGTGGAAGTCCACAGATGACTAAAAACATTATCAGAAAACTGTTGAAGATGGTCGCATTTACAAATTCCTTGTTGGCTTCAATGTTGAGTTTGATGAGGTTAGAGGCGGGATACTCTTCCAAATATTAACGATGTTTTTTCTGAAGTTCGCAGGGAGGAAAGCAGCAGGAATGTTATGGTTGGAAAGAAGGCAGTTGATTTAGTTGAAAGTTTCACATTAGTGATTGAAAATACTGCAATGAACACTTCTGATCAATCCAACAAAACTCATGACAAGTCTCGTGTCTGGTGTGATCACTGCAACAAACTCCGTCATACGAGAGAAACTTGTTGGAAACTACATGGCAAACCTACAAATTGGAAAAACTCTAAGCAATTTGAGAGAACTTCCCATCAGCATGCCTCCAATGCAAATATTGTTGATTCTAGTCCACTCAAAGAGCAAATTGATAAAATCCTGAAACTGCTAAAATCCAATTCATCAGGTAATCCTAATGTTTTCTTGGCATAAATAGGTAATTCCCCTCAAGCTCTCTCGTGTCTAAATGCCTCTCCGTGGATCATCGATTCCAGAGCTACTGATCATATGACTAGTTTCTTGTGTTTATTTGAATCATACTCCCCTGTCTATTGTAAAGAAAAAGTCTATATTATCGATGGTAGTTTTACATCTATTGCAGGCAAAGGAACTATTCCCCTAAGTACAAAACTCATATATGTTCTGTCCTTCGTGTTCCTCAACTAGCTTATAATTTATTATATGTGAGCAAAATATCTAAGGATGCTAAATGTCGTATTATCTTTTGTGAAACTCATTGTCTCTTTTAGGATCAAGACTTGGGGGAGACGATTTGGACGTGCTAGGATGATTGATGGTCTTTATTACTTTGATGATGTCACACCCCACCCCGAACTACCCTCCTGTAGCCTGTGACGAAGTGTGAGGACAGCAGTTACCGACTACCCTGTCGCATAATCCACTGTCAACTTTACCTCACTTACGTATAAAACCCACAAACATAATGTCCAAAGTGAACGCGGCGTCCAAAGTTAGGTGATGCGTTCATGATGGACCTTGCGTCCAAGAGAGGGCGACACATCCGAAAGAGAAGTAAGAAGAGTCGGGATGCACTTTGTGGAAATAATCAACCTTGCGTTGAAGGGCAGGGGTGCAATAGTTACCAACCTTGCGTTGAAGGGCAGGGTTGTGTTCAACCGAGCTGACAGAGGAAAATGGAGCCTTGCGTTCTAGAGTTAGAACGCTGCGTCCAAGAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAGGATTTATTCTTTGGCAAGTACAGGTGAGTAACACCTGCGTTTTACAAAATATAAATGAGTTCCTTATGAATCTGATTTCATGGGTTTTAAATGAATAAATGCATGCGTTTTACTTGTAAACTTTGAGTATGCTGATTACTTGCTATGAGTTTATAAACGCATGGTGATTGGTTAATAGTTGTTTCATGACTTTTCTGAAAAGCATGGTGTTATTTGATTTCAAAAAGACTTGAAAATAGACTTGTATGAAAAGCGTGCGGTTTGATACTAAAACTGGAAATTGAATTTAGCATGCTGATGAGGTGAGATTTGGAAACGGTTAATTTATGAGTTATTAATGTAATGTTTCCAAAATATGTATGATGTTTTATAAAGCTTTGAAAAGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGTGGGCAGCCCGGATTATAAAGGTACCCAATGCTCAGGGACTCATAGAAGGCATATGGGTAACCTGGATATAGAAATGGGACCCTAATGCTCAGGGACTCGTAGAAGTCATTGAGGGCGGCCCGAATTCTAGTACCTATGTGCACATAGAGGTATATACGATGCTGATGTGTTGAGATTACTCCACACAGCTAAGGAAAAATCGATGTTGAGGAGCGTTAAGCATTGCTCCGCCTCAACTAAGGAAAAAGTATTCTATAAGAATGAGATTTTTGAGTGTGTATTCTGAAACGGGCAAGCATGTTTTCACAATGGTATTTAAGTATAATTTAATATGACTTGAAGTGTTATATTTTATGCGAGTTTGACCAGTTTTACAGTTAAAATATATTGTTTTCAGAAAACCGTTACTCACTGAGCTGTTAGCTCACCCTTTTTATATGTTTTCCATTTTCAGGTAGCATAACAGTTCCCGTTGCTGATCGAAGTTGA ATGTCAGAGACTAAGGTATCAGCTGCCACAGTTTTCGACAATCGGATCCATTACAACACTCCCACTGTCCAAATCACCACCATTCGACTTAACGGGGATAACTTTCTTTGTTGGTCCCAGAGTGTTCGGATGGAGGAAAGCAGCAGGAATGTTATGGTTGGAAAGAAGGCAGTTGATTTAGTTGAAAGTTTCACATTAGTGATTGAAAATACTGCAATGAACACTTCTGATCAATCCAACAAAACTCATGACAAGTCTCGTGTCTGGTGTGATCACTGCAACAAACTCCGTCATACGAGAGAAACTTGTTGGAAACTACATGGCAAACCTACAAATTGGAAAAACTCTAAGCAATTTGAGAGAACTTCCCATCAGCATGCCTCCAATGCAAATATTGTTGATTCTAGTCCACTCAAAGAGCAAATTGATAAAATCCTGAAACTGCTAAAATCCAATTCATCAGGGTTGTGTTCAACCGAGCTGACAGAGGAAAATGGAGCCTTGCGTTCTAGAGTTAGAACGCTGCGTCCAAGAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAGGATTTATTCTTTGGCAAGTACAGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGTGGGCAGCCCGGATTATAAAGGTACCCAATGCTCAGGGACTCATAGAAGGCATATGGGTAGCATAACAGTTCCCGTTGCTGATCGAAGTTGA ATGTCAGAGACTAAGGTATCAGCTGCCACAGTTTTCGACAATCGGATCCATTACAACACTCCCACTGTCCAAATCACCACCATTCGACTTAACGGGGATAACTTTCTTTGTTGGTCCCAGAGTGTTCGGATGGAGGAAAGCAGCAGGAATGTTATGGTTGGAAAGAAGGCAGTTGATTTAGTTGAAAGTTTCACATTAGTGATTGAAAATACTGCAATGAACACTTCTGATCAATCCAACAAAACTCATGACAAGTCTCGTGTCTGGTGTGATCACTGCAACAAACTCCGTCATACGAGAGAAACTTGTTGGAAACTACATGGCAAACCTACAAATTGGAAAAACTCTAAGCAATTTGAGAGAACTTCCCATCAGCATGCCTCCAATGCAAATATTGTTGATTCTAGTCCACTCAAAGAGCAAATTGATAAAATCCTGAAACTGCTAAAATCCAATTCATCAGGGTTGTGTTCAACCGAGCTGACAGAGGAAAATGGAGCCTTGCGTTCTAGAGTTAGAACGCTGCGTCCAAGAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAGGATTTATTCTTTGGCAAGTACAGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGTGGGCAGCCCGGATTATAAAGGTACCCAATGCTCAGGGACTCATAGAAGGCATATGGGTAGCATAACAGTTCCCGTTGCTGATCGAAGTTGA MSETKVSAATVFDNRIHYNTPTVQITTIRLNGDNFLCWSQSVRMEESSRNVMVGKKAVDLVESFTLVIENTAMNTSDQSNKTHDKSRVWCDHCNKLRHTRETCWKLHGKPTNWKNSKQFERTSHQHASNANIVDSSPLKEQIDKILKLLKSNSSGLCSTELTEENGALRSRVRTLRPRSSGRGNRGKEEDLFFGKYRDPNAQGLVEGIVGSPDYKGTQCSGTHRRHMGSITVPVADRS Homology
BLAST of Clc11G03210 vs. NCBI nr
Match: TYK23156.1 (uncharacterized protein E5676_scaffold142G001750 [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 7.2e-23 Identity = 59/83 (71.08%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of Clc11G03210 vs. NCBI nr
Match: XP_006493529.1 (uncharacterized protein LOC102626863 [Citrus sinensis]) HSP 1 Score: 114.8 bits (286), Expect = 1.0e-21 Identity = 79/197 (40.10%), Postives = 98/197 (49.75%), Query Frame = 0
BLAST of Clc11G03210 vs. NCBI nr
Match: KAF5955000.1 (hypothetical protein HYC85_007856 [Camellia sinensis]) HSP 1 Score: 112.5 bits (280), Expect = 5.2e-21 Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of Clc11G03210 vs. NCBI nr
Match: KAF5932129.1 (hypothetical protein HYC85_028300 [Camellia sinensis]) HSP 1 Score: 111.7 bits (278), Expect = 8.8e-21 Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of Clc11G03210 vs. NCBI nr
Match: TYK15014.1 (uncharacterized protein E5676_scaffold45G00480 [Cucumis melo var. makuwa]) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-20 Identity = 74/175 (42.29%), Postives = 93/175 (53.14%), Query Frame = 0
BLAST of Clc11G03210 vs. ExPASy TrEMBL
Match: A0A5D3DHP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001750 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.5e-23 Identity = 59/83 (71.08%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of Clc11G03210 vs. ExPASy TrEMBL
Match: A0A7J7HQ55 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_007856 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.5e-21 Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of Clc11G03210 vs. ExPASy TrEMBL
Match: A0A7J7FV14 (Helicase ATP-binding domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_028300 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.3e-21 Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of Clc11G03210 vs. ExPASy TrEMBL
Match: A0A5D3CVQ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00480 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.6e-21 Identity = 74/175 (42.29%), Postives = 93/175 (53.14%), Query Frame = 0
BLAST of Clc11G03210 vs. ExPASy TrEMBL
Match: A0A7J7GIG1 (Phosphoenolpyruvate carboxylase OS=Camellia sinensis OX=4442 GN=HYC85_021414 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.6e-20 Identity = 61/123 (49.59%), Postives = 75/123 (60.98%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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