Clc11G03190 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G03190
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pectin lyase-like superfamily protein
Location	ClcChr11: 3093506 .. 3095712 (-)
RNA-Seq Expression	Clc11G03190
Synteny	Clc11G03190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACACCCTGCAAAACTTTCAGTCTGTTTTGACATGAAAAATTAGATACTGCTGAAGAATTTTAGTCCTGATGAAGATTTAAGAGTATCCACAGCTACAATGTTTTTGATTTTACATTGCAGGATGCCTTCATCATTCCTGTGGTGATTTTCGGGTTAGTTTACGCAATCGTGTTCACGGAAGGGTTTCCAGAAGAGAACATCTTTAATGTCATGAGTTATGGAGCTGTGGGAGGAAGCAACACAGATAGTTCTCAAGTAAAATCTTAGACCTGTGGATTTGCAAGTTTTGTATGGGATTTGTTAATAACAATCCCTTCGATTGAAAGAGCAGGGAGGGCGGAGTGATTGATTCTTACACCACATATAATGGTGTAAAACTACCATTCAAATTCTGCCTGCCTTGAATCCCTTCACCTTTCTAATAAAATCCTTAGCCCTAATATTTCCCTAACTAACATGGAATATAACATATGTTTTGACAGGCAGTTTTAAAAGCATGGAAGGCAGCATGTAGTTCTAAAACTGAAAGTTCTATGGTGCTAATTCCTAAGGGGCAAACCATTATGGTAAAACCAATTCTTTTGAGTGGTCCTTGCAGGGCAAAGAGCATCACTTTCATGGTAAAGAAAAAGCAGGGGTTTCCCCTTTATGATTAAAATCTTTCCTAGAATACTACCTGTCTTCAGGTAGATGCAAATTGTCACAGATAGATGGAGTGATTGTGGCACCAACCTCACCGGATGAATGGGCAGGGATCGACAAGAGTCAGTGGCTAGCCTTTGAAGGGATAAGCAGGCTCAGTATCACTGGCTCTGGCATCGGCAAGATCGATGGACAAGGTACAGGCTGGTGGAACCAATCATGCAGGGATCACCCAAACTTGGTAAGAGTGAATAAATAAGAAATTTTCAAATGCAAACTAAACCAGTATCTGATGTTTCTTCTACTTTTGACAGGAGGGTTGCACCTCAATAGCACCTACTGTAAGTATCCTGCACAAAGAGATTTTATAATACTAGAAAGATGATATCTTGATACAAACCTCAATCAAATGGATGAACTTACCTGAGAGAATCTTGAGCCATTACTGCAGGCAATGAAGATCATTTCATGCAGCGACGCCAACCTGAGCAACATTCACTTTATTAACAGTTCACAAGCACATATACTATTAATGGGGTGCCTAAGAACCGAAATTAAGAACTTGGTAATCACAGCTCCTGAAAGCAGTCCAAACACAGATGGGATCCACATTCATTCCTCTCACAATGTTATTATAAGAAACACGACAATAGGAACAGGTATCTTATTGAATGATTTCCTTGAGCATCAATTTTACTAAGATTAACAAGTATCAACACTTTTTATTGAGACAAATAATATATAATTGTGATGAACAGGTGATGATTGTGTATCTATTGGAGATTACACCTCCCATGTGAATATCTCACATATTAAATGTGGACCTGGTCATGGAATAAGGTAGGCACCCAATTCAGATAAACTCTAGAGAATCAGCCTATGAGCAAAAAAGAACACAGGGAAATTAGAACAAAGTTCTACATTCCAATATCTCATTTCATATGTTGTCTGATAATAGCATTGGAAGCTTGGGTAGAAGTGGCAATTTTGTACAAGTGGAGGATATTAGCGTGAGTGATATCTACTTCAAAGGGACTACCAATGGAGCCCGGATTAAGACTTGGCAGGTTGATGAAAATTCTATTTAATTTATTTCTCAATAAAAATAAACTGTAAAGCTTCCACTAACACTTCCAAAAGATTGGTAGGGGTAACATTCAAAGGGTCACATTTGAGAATCTCCATTTTGAATCAGTCCATAACCCATTAATTATAGACCAAAACTATGGTAAGGTAGGGGGACTCTGCAAGGAAAAGGTGAGAGAAACTGAACTTTGTCATATTCATTTTAACGTGGCTCTGCTCAGGAAATTTTTTATTTTTCACAGCACACAGGGGTTCGTATAGCCAACATATCCATCAATAACCTTTTTGGAACATCAATGAGCAATGTGGCTATCAATCTGAATTGCAGCAGGTCTGTTGCCTGCACTGGTATAATGTTGAAGTCAATACAGCTTCAATCTGTAAACAGTGGACAAAAGGTGACCTCAAGCTGCATCAATGCCTATGGTTTCGCCTTTGGAGTGGTTCAACCTGAACCCTGTCTACAGATCTAA

mRNA sequence

ATGGATGCCTTCATCATTCCTGTGGTGATTTTCGGGTTAGTTTACGCAATCGTGTTCACGGAAGGGTTTCCAGAAGAGAACATCTTTAATGTCATGAGTTATGGAGCTGTGGGAGGAAGCAACACAGATAGTTCTCAAGCAGTTTTAAAAGCATGGAAGGCAGCATGTAGTTCTAAAACTGAAAGTTCTATGGTGCTAATTCCTAAGGGGCAAACCATTATGGTAAAACCAATTCTTTTGAGTGGTCCTTGCAGGGCAAAGAGCATCACTTTCATGATAGATGGAGTGATTGTGGCACCAACCTCACCGGATGAATGGGCAGGGATCGACAAGAGTCAGTGGCTAGCCTTTGAAGGGATAAGCAGGCTCAGTATCACTGGCTCTGGCATCGGCAAGATCGATGGACAAGGTACAGGCTGGTGGAACCAATCATGCAGGGATCACCCAAACTTGGAGGGTTGCACCTCAATAGCACCTACTGCAATGAAGATCATTTCATGCAGCGACGCCAACCTGAGCAACATTCACTTTATTAACAGTTCACAAGCACATATACTATTAATGGGGTGCCTAAGAACCGAAATTAAGAACTTGGTAATCACAGCTCCTGAAAGCAGTCCAAACACAGATGGGATCCACATTCATTCCTCTCACAATGTTATTATAAGAAACACGACAATAGGAACAGGTGATGATTGTGTATCTATTGGAGATTACACCTCCCATGTGAATATCTCACATATTAAATGTGGACCTGGTCATGGAATAAGCATTGGAAGCTTGGGTAGAAGTGGCAATTTTGTACAAGTGGAGGATATTAGCGTGAGTGATATCTACTTCAAAGGGACTACCAATGGAGCCCGGATTAAGACTTGGCAGATTGGTAGGGGTAACATTCAAAGGGTCACATTTGAGAATCTCCATTTTGAATCAGTCCATAACCCATTAATTATAGACCAAAACTATGGTAAGCACACAGGGGTTCGTATAGCCAACATATCCATCAATAACCTTTTTGGAACATCAATGAGCAATGTGGCTATCAATCTGAATTGCAGCAGGTCTGTTGCCTGCACTGGTATAATGTTGAAGTCAATACAGCTTCAATCTGTAAACAGTGGACAAAAGGTGACCTCAAGCTGCATCAATGCCTATGGTTTCGCCTTTGGAGTGGTTCAACCTGAACCCTGTCTACAGATCTAA

Coding sequence (CDS)

ATGGATGCCTTCATCATTCCTGTGGTGATTTTCGGGTTAGTTTACGCAATCGTGTTCACGGAAGGGTTTCCAGAAGAGAACATCTTTAATGTCATGAGTTATGGAGCTGTGGGAGGAAGCAACACAGATAGTTCTCAAGCAGTTTTAAAAGCATGGAAGGCAGCATGTAGTTCTAAAACTGAAAGTTCTATGGTGCTAATTCCTAAGGGGCAAACCATTATGGTAAAACCAATTCTTTTGAGTGGTCCTTGCAGGGCAAAGAGCATCACTTTCATGATAGATGGAGTGATTGTGGCACCAACCTCACCGGATGAATGGGCAGGGATCGACAAGAGTCAGTGGCTAGCCTTTGAAGGGATAAGCAGGCTCAGTATCACTGGCTCTGGCATCGGCAAGATCGATGGACAAGGTACAGGCTGGTGGAACCAATCATGCAGGGATCACCCAAACTTGGAGGGTTGCACCTCAATAGCACCTACTGCAATGAAGATCATTTCATGCAGCGACGCCAACCTGAGCAACATTCACTTTATTAACAGTTCACAAGCACATATACTATTAATGGGGTGCCTAAGAACCGAAATTAAGAACTTGGTAATCACAGCTCCTGAAAGCAGTCCAAACACAGATGGGATCCACATTCATTCCTCTCACAATGTTATTATAAGAAACACGACAATAGGAACAGGTGATGATTGTGTATCTATTGGAGATTACACCTCCCATGTGAATATCTCACATATTAAATGTGGACCTGGTCATGGAATAAGCATTGGAAGCTTGGGTAGAAGTGGCAATTTTGTACAAGTGGAGGATATTAGCGTGAGTGATATCTACTTCAAAGGGACTACCAATGGAGCCCGGATTAAGACTTGGCAGATTGGTAGGGGTAACATTCAAAGGGTCACATTTGAGAATCTCCATTTTGAATCAGTCCATAACCCATTAATTATAGACCAAAACTATGGTAAGCACACAGGGGTTCGTATAGCCAACATATCCATCAATAACCTTTTTGGAACATCAATGAGCAATGTGGCTATCAATCTGAATTGCAGCAGGTCTGTTGCCTGCACTGGTATAATGTTGAAGTCAATACAGCTTCAATCTGTAAACAGTGGACAAAAGGTGACCTCAAGCTGCATCAATGCCTATGGTTTCGCCTTTGGAGTGGTTCAACCTGAACCCTGTCTACAGATCTAA

Protein sequence

MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNYGKHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVVQPEPCLQI

Homology

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BLAST of Clc11G03190 vs. NCBI nr
Match: XP_022143115.1 (probable polygalacturonase At1g80170 [Momordica charantia])

HSP 1 Score: 672.2 bits (1733), Expect = 2.8e-189
Identity = 327/408 (80.15%), Postives = 367/408 (89.95%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKT 60
           M AF +P VIFGLV A+ FT GF +EN+FNVMSYGAV G+  DSS A+LKAWKAACSSKT
Sbjct: 1   MGAFAVPAVIFGLVCAVTFTIGFSKENVFNVMSYGAVEGTTRDSSHAILKAWKAACSSKT 60

Query: 61  ESSMVLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGI 120
           ESS VLIPK  T++VKPI+L GPCRA SITFMI G IVAPTSP EW   D+SQWLAFEG+
Sbjct: 61  ESSTVLIPKRHTLLVKPIVLRGPCRANSITFMIHGEIVAPTSPGEWTRTDQSQWLAFEGV 120

Query: 121 SRLSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINS 180
           SRL++TG+GIGKIDG+GT WW+QSCRDHP+L+GCTS+APTAMKIISC++ +LSNIHFINS
Sbjct: 121 SRLNVTGTGIGKIDGRGTRWWSQSCRDHPDLKGCTSLAPTAMKIISCNNTSLSNIHFINS 180

Query: 181 SQAHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYT 240
           SQ H+L+MG  R EIKNLVITAPESSPNTDGIHIHSSHNVII+NTTIGTGDDCVSIGDYT
Sbjct: 181 SQTHVLIMGSKRVEIKNLVITAPESSPNTDGIHIHSSHNVIIKNTTIGTGDDCVSIGDYT 240

Query: 241 SHVNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQ 300
           S+VNISHI+CGPGHGISIGSLGRSGNFVQVEDI VS++YFKGTTNGARIKTWQIGRGNI+
Sbjct: 241 SNVNISHIRCGPGHGISIGSLGRSGNFVQVEDIRVSNVYFKGTTNGARIKTWQIGRGNIR 300

Query: 301 RVTFENLHFESVHNPLIIDQNYG--------KHTGVRIANISINNLFGTSMSNVAINLNC 360
           RVTF+NL+FESV+NP IIDQNYG        K TGV IAN+SINNLFGTS+SNVAINLNC
Sbjct: 301 RVTFQNLYFESVNNPFIIDQNYGNLGGLSNEKQTGVHIANVSINNLFGTSISNVAINLNC 360

Query: 361 SRSVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
           SRSVACTGI+LKSIQL+S NSGQKVTSSC+NA+GF+FGVVQPEPCLQI
Sbjct: 361 SRSVACTGILLKSIQLKSANSGQKVTSSCLNAHGFSFGVVQPEPCLQI 408

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BLAST of Clc11G03190 vs. NCBI nr
Match: KAA0061603.1 (putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 600.9 bits (1548), Expect = 8.0e-168
Identity = 314/428 (73.36%), Postives = 338/428 (78.97%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKT 60
           M AF  P+  FGLVYAI+F +GFPEE IFNV+SYGAVGGSNTDSSQA+ KAWKAAC+SKT
Sbjct: 1   MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVVSYGAVGGSNTDSSQAISKAWKAACNSKT 60

Query: 61  ESSMVLIPKGQTIMVKPILLSGPCRAKSITFM---------------------------- 120
           +SS VLIPK QT+MVKPILLSGPCRAKSITFM                            
Sbjct: 61  KSSTVLIPKRQTVMVKPILLSGPCRAKSITFMVKKNRDFPLMIKSFLEYYLSSGRCKLSQ 120

Query: 121 IDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSCRDHPNLE 180
           I+GVIVAPTSP EWAG DKS WLAF+GISRLSITGSGIGKIDG+GTGWWNQSCRDHP+L 
Sbjct: 121 INGVIVAPTSPKEWAGTDKSLWLAFKGISRLSITGSGIGKIDGRGTGWWNQSCRDHPSLP 180

Query: 181 GCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPESSPNTDGI 240
                   A KIISC+D NLSN+HFINSSQAH+LLM C RTEIKNLVITAPESSPNTDGI
Sbjct: 181 -----LLQATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI 240

Query: 241 HIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSGNFVQVED 300
           HIHSSHN+II+NTTIGTGDDCVS GDYTSHVNISHIKCGPGHGISIGSLG+SGNFVQVED
Sbjct: 241 HIHSSHNIIIKNTTIGTGDDCVSTGDYTSHVNISHIKCGPGHGISIGSLGKSGNFVQVED 300

Query: 301 ISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNYGKHTGVRIAN 360
           ISVS+IYFKGTTN ARIKTWQ                                +GVRIAN
Sbjct: 301 ISVSNIYFKGTTNRARIKTWQ-------------------------------QSGVRIAN 360

Query: 361 ISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVV 401
           +SI NLFGTSMSNVAINLNCSRSVACTGI+LKSIQLQSVNSGQKVTSSCIN +GFAFGVV
Sbjct: 361 VSIKNLFGTSMSNVAINLNCSRSVACTGILLKSIQLQSVNSGQKVTSSCINVHGFAFGVV 392

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BLAST of Clc11G03190 vs. NCBI nr
Match: TYJ97813.1 (putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 523.9 bits (1348), Expect = 1.3e-144
Identity = 279/412 (67.72%), Postives = 308/412 (74.76%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLK---------- 60
           M AF  P+  FGLVYAI+F +GFPEE IFNVMS         +++Q VL           
Sbjct: 1   MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSMELW----EEATQIVLNKFVRVFSYKW 60

Query: 61  --AWKAACSSKTESSMVLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAG 120
              W+  C      S     + +  ++K   + G C+       I+GVIVAPTSP EWAG
Sbjct: 61  RVGWEQGCEEFCSDSTGKFWE-RVALLKSYSIVGRCKLS----QINGVIVAPTSPKEWAG 120

Query: 121 IDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCS 180
            DKS WLAF+GISRLSITGSGIGKIDG+GTGWWNQSCRDHP+LEG T IAPTA KIISC+
Sbjct: 121 TDKSLWLAFKGISRLSITGSGIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCN 180

Query: 181 DANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIG 240
           D NLSN+HFINSSQAH+LLM C RTEIKNLVITAPESSPNTDGIHIHSSHN+II+NTTIG
Sbjct: 181 DTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIG 240

Query: 241 TGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGAR 300
           TGDDCVS GDYTSHVNISHIKCGPGHGISIGSLG+SGNFVQVEDISVS+IYFKGTTN AR
Sbjct: 241 TGDDCVSTGDYTSHVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRAR 300

Query: 301 IKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNYGKHTGVRIANISINNLFGTSMSNVAI 360
           IKTWQ                                +GVRIAN+SI NLFGTSMSNVAI
Sbjct: 301 IKTWQ-------------------------------QSGVRIANVSIKNLFGTSMSNVAI 360

Query: 361 NLNCSRSVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
           NLNCSRSVACTGI+LKSIQLQSVNSGQKVTSSCIN +GFAFGVVQP+PCLQI
Sbjct: 361 NLNCSRSVACTGILLKSIQLQSVNSGQKVTSSCINVHGFAFGVVQPKPCLQI 372

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BLAST of Clc11G03190 vs. NCBI nr
Match: XP_016902034.1 (PREDICTED: probable polygalacturonase At1g80170 isoform X1 [Cucumis melo])

HSP 1 Score: 514.2 bits (1323), Expect = 9.9e-142
Identity = 250/294 (85.03%), Postives = 270/294 (91.84%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKT 60
           M AF  P+  FGLVYAI+F +GFPEE IFNVMSYGAVGGSNTDSSQA+ +AWKAAC+SKT
Sbjct: 1   MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKT 60

Query: 61  ESSMVLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGI 120
           +SS VLIPK QT+MVKPILLSGPCR KSITFMI+GVI+APTSP EWAG DKS WLAFEGI
Sbjct: 61  KSSTVLIPKRQTVMVKPILLSGPCRVKSITFMINGVIMAPTSPKEWAGTDKSLWLAFEGI 120

Query: 121 SRLSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINS 180
           SRLSITGS IGKIDG+GTGWWNQSCRDHP+LEG T IAPTA KIISC+D NLSN+HFINS
Sbjct: 121 SRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINS 180

Query: 181 SQAHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYT 240
           SQAH+LLM C RTEIKNLVITAPESSPNTDGIHIHSSHN+II+NTTIGTGDDCVS GDYT
Sbjct: 181 SQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYT 240

Query: 241 SHVNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQI 295
           S VNISHIKCGPGHGISIGSLG+SGNFVQVEDISVS+IYFKGTTN ARIKTWQ+
Sbjct: 241 SRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV 294

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BLAST of Clc11G03190 vs. NCBI nr
Match: KAF3453693.1 (hypothetical protein FNV43_RR04134 [Rhamnella rubrinervis])

HSP 1 Score: 490.0 bits (1260), Expect = 2.0e-134
Identity = 238/401 (59.35%), Postives = 307/401 (76.56%), Query Frame = 0


Query: 9   VIFGLVYAIVFTEGFPEENI-FNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLI 68
           +I GL  AI       E+ I F+VM YGAV    TD SQA  KAW AACSS+TE+  ++I
Sbjct: 22  LILGLACAIFACSKSNEDAICFDVMDYGAVCDGTTDDSQAFFKAWNAACSSETENPSIII 81

Query: 69  PKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITG 128
           PK QT +V P++  GPC+AK+I F+I G ++AP SP  W G+D SQWL F G+S L ++G
Sbjct: 82  PK-QTFLVNPVVFRGPCKAKNINFLILGRVLAPDSPQAWEGLDPSQWLVFHGVSGLRVSG 141

Query: 129 SGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILL 188
           SG+  IDG+G GWW QSCRDHP+LEGCTS+APTA+ +ISC  ++L +IHF+NSSQ H+L+
Sbjct: 142 SGL--IDGRGNGWWEQSCRDHPDLEGCTSLAPTALNLISCKRSSLKDIHFVNSSQTHVLI 201

Query: 189 MGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISH 248
           MGC   +I NL+I APE SPNTDGIHI +S++VII N T+GTGDDC+SIGD TS++ IS+
Sbjct: 202 MGCDGMDIGNLMIQAPEISPNTDGIHIQASNDVIISNITVGTGDDCISIGDSTSNIYISN 261

Query: 249 IKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENL 308
           + CGPGHGISIGSLG+SGN VQVE+I VS +Y KGTTNG RIKTWQ+G+G ++ VTF++L
Sbjct: 262 VGCGPGHGISIGSLGKSGNMVQVENIHVSKVYLKGTTNGVRIKTWQVGKGYVRGVTFKDL 321

Query: 309 HFESVHNPLIIDQNYGK--------HTGVRIANISINNLFGTSMSNVAINLNCSRSVACT 368
           +F+SV NP+IIDQNY           +GV I+++   N +GTS ++VAINLNCSRSVACT
Sbjct: 322 YFDSVENPIIIDQNYCNIRGACKELQSGVHISDVVFINFYGTSSTDVAINLNCSRSVACT 381

Query: 369 GIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
            I+LKSIQL S + G  +TS+C NA+G+ FG+VQP+PCLQI
Sbjct: 382 EILLKSIQLTSASIGHTLTSNCTNAFGYTFGMVQPQPCLQI 419

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BLAST of Clc11G03190 vs. ExPASy Swiss-Prot
Match: Q94AJ5 (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.6e-86
Identity = 165/381 (43.31%), Postives = 234/381 (61.42%), Query Frame = 0


Query: 26  ENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQTIMVKPILLSGPCR 85
           E + +V ++GA G   TD ++A   AWK ACSSK + + +L+P+  T +++PI LSGPC+
Sbjct: 50  ERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVK-TRILVPENYTCLLRPIDLSGPCK 109

Query: 86  AKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSC 145
           A+ +T  I G I+AP  PD W G+++ +WL F G+SRL++ G   G ++G G  WW +SC
Sbjct: 110 AR-LTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGG--GTVNGMGQEWWERSC 169

Query: 146 RDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPES 205
           + H +   C   APTA+    C +  + N++ I+S Q HI L  C R  I  L + AP +
Sbjct: 170 K-HNHSNPCRG-APTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPAT 229

Query: 206 SPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSG 265
           SPNTDGIHI  S  ++I NTT+ TGDDC+SI   ++ ++IS+I CGPGHGISIGSLG+S 
Sbjct: 230 SPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSK 289

Query: 266 NFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNY--- 325
           ++ +V DI+V       T NG RIKTWQ G G + ++ F N+   +V NP+IIDQ Y   
Sbjct: 290 SWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDS 349

Query: 326 -----GKHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQSVNSGQKV 385
                 + + + I NIS  ++ GTS S  AI ++CS S  C  I+L+ I L+  N     
Sbjct: 350 RKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFT 409

Query: 386 TSSCINAYGFAFGVVQPEPCL 399
            S C  AYG + G V P PCL
Sbjct: 410 ESFCWEAYGSSSGQVYPPPCL 424

[Close]

BLAST of Clc11G03190 vs. ExPASy Swiss-Prot
Match: Q9LW07 (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.8e-77
Identity = 160/400 (40.00%), Postives = 226/400 (56.50%), Query Frame = 0


Query: 13  LVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQT 72
           L +++ F + F   N  +V  +GAVG   TD SQA LKAW+A CS  T     ++P G T
Sbjct: 8   LNFSLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSG-TGDGQFVVPAGMT 67

Query: 73  IMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGK 132
            M++P+   G C++  +   + G +VAP S   W G DK QW+ F  I  L I G   G+
Sbjct: 68  FMLQPLKFQGSCKSTPVFVQMLGKLVAP-SKGNWKG-DKDQWILFTDIEGLVIEGD--GE 127

Query: 133 IDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLR 192
           I+GQG+ WW                 PTA+K  SC++  LS +  ++S  AHI +  C  
Sbjct: 128 INGQGSSWWEHK-----------GSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNY 187

Query: 193 TEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGP 252
             I +L I APESSPNTDGI + +S NV+I++  I TGDDC++I   TS+++IS I CGP
Sbjct: 188 VTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGP 247

Query: 253 GHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESV 312
           GHGISIGSLG+ G    VE++ V +  F+GT NGARIKTWQ G G  + +TF  +  ++V
Sbjct: 248 GHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNV 307

Query: 313 HNPLIIDQNYG----------KHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIM 372
            NP+IIDQ Y           K + V ++ +  +N  GTS S   ++  CS  V CT I 
Sbjct: 308 ENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIF 367

Query: 373 LKSIQLQ--SVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
           L+ ++++  S  SGQ     C+N  G +   V    CL++
Sbjct: 368 LRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLEL 391

[Close]

BLAST of Clc11G03190 vs. ExPASy Swiss-Prot
Match: O23147 (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.7e-72
Identity = 150/378 (39.68%), Postives = 222/378 (58.73%), Query Frame = 0


Query: 25  EENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQTIMVKPILLSGPC 84
           E +  +V ++GA G   TD +QA  KAWK ACS+   ++  L+PKG+T ++K     GPC
Sbjct: 64  EASTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTF-LVPKGKTYLLKSTRFRGPC 123

Query: 85  RAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQS 144
           ++    F I G + A T   ++   DK+ WL  E ++ LSI G   G I+G G  WW  S
Sbjct: 124 KSLR-NFQILGTLSASTKRSDYK--DKNHWLILEDVNNLSIDGGSTGIINGNGKTWWQNS 183

Query: 145 CRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPE 204
           C+   + + CT  APTA+ + +  + N+ N+   N+ Q  I +  C + E+ N+ ITAP 
Sbjct: 184 CKIDKS-KPCTK-APTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPG 243

Query: 205 SSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRS 264
            SPNTDGIHI ++ N+ + N+ IGTGDDC+SI D T ++ I  + CGPGHGISIGSLG  
Sbjct: 244 DSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDD 303

Query: 265 GNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNY-- 324
            +   V  I+V    F  + NG RIKT+Q G G  + + F+N+  E+V NP+IIDQ+Y  
Sbjct: 304 NSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCD 363

Query: 325 -----GKHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQSVNSGQKV 384
                 + + V++ N+   N+ GTS ++VAI LNCS    C GI+L++++++        
Sbjct: 364 KDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIKG------G 423

Query: 385 TSSCINAYGFAFGVVQPE 396
           T+SC NA     G V P+
Sbjct: 424 TASCKNANVKNQGTVSPK 429

[Close]

BLAST of Clc11G03190 vs. ExPASy Swiss-Prot
Match: P48978 (Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.9e-72
Identity = 154/386 (39.90%), Postives = 220/386 (56.99%), Query Frame = 0


Query: 18  VFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQTIMVKP 77
           + T   P + I +V  +GA  G+  D +QA +KAWKAACSS    +MVL+   +  +V+P
Sbjct: 89  IATSSAPAKTI-SVDDFGA-KGNGADDTQAFVKAWKAACSS--SGAMVLVVPQKNYLVRP 148

Query: 78  ILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQG 137
           I  SGPC+++ +T  I G I A      +  ID   WL F+ +  L + G   G I+G G
Sbjct: 149 IEFSGPCKSQ-LTLQIYGTIEASEDRSIYKDID--HWLIFDNVQNLLVVGP--GTINGNG 208

Query: 138 TGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKN 197
             WW  SC+  P    C + APTA+    C++  + N++  ++ Q H++   C+  +   
Sbjct: 209 NIWWKNSCKIKPQ-PPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASC 268

Query: 198 LVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGIS 257
           L +TAPE SPNTDGIH+ ++ N+ I ++ IGTGDDC+SI   +  V  + I CGPGHGIS
Sbjct: 269 LTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGIS 328

Query: 258 IGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLI 317
           IGSLG  G+   V  + V+     GT+NG RIKTW+ G G+   + F+N+    V NP+I
Sbjct: 329 IGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPII 388

Query: 318 IDQNYGKH---------TGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQL 377
           IDQNY  H         + V++ N+   N+ GTS S  AI LNCS+SV C GI+L+S+QL
Sbjct: 389 IDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQL 448

Query: 378 QSVNSGQKVTSSCINAYGFAFGVVQP 395
           Q+        + C N      GVV P
Sbjct: 449 QNGR------AECNNVQPAYKGVVSP 458

[Close]

BLAST of Clc11G03190 vs. ExPASy Swiss-Prot
Match: Q9SFB7 (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 6.2e-70
Identity = 140/374 (37.43%), Postives = 220/374 (58.82%), Query Frame = 0


Query: 29  FNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQTIMVKPILLSGPCRAKS 88
           FNV ++GA    N D S+A +KAW+AACSS T    ++ PK +  M+K +  SGPC++  
Sbjct: 71  FNVNTFGAKANGN-DDSKAFMKAWEAACSS-TGIVYIVAPKNRDYMLKAVTFSGPCKSSL 130

Query: 89  ITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSCRDH 148
           I F I G I A  +P ++   ++  W+ FE ++ L + G   G+IDG G  WW +SC+ +
Sbjct: 131 IIFKIYGRIEAWENPSDYK--ERRHWIVFENVNNLRVEGG--GRIDGNGHIWWPKSCKIN 190

Query: 149 PNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPESSPN 208
           P L  C   APTA+  + C++  +SNI   N+ Q H+    C   +  NL++T+P  SPN
Sbjct: 191 PQLP-CLG-APTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPN 250

Query: 209 TDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSGNFV 268
           TDGIH+  + N++I+++ + TGDDC+SI   + +V  + I CGPGHGISIGSLG   +  
Sbjct: 251 TDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEA 310

Query: 269 QVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNY------ 328
            V ++ V+     GTTNG RIKTWQ G G  + + F+++  ++V NP+II+Q+Y      
Sbjct: 311 YVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEA 370

Query: 329 --GKHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQSVNSGQKVTSS 388
              + + V+++N+   N+ GTS   +A+   CS+++ C GI +++++L          +S
Sbjct: 371 CPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKAS 430

Query: 389 CINAYGFAFGVVQP 395
           C N      G V P
Sbjct: 431 CSNVKLDTRGNVSP 436

[Close]

BLAST of Clc11G03190 vs. ExPASy TrEMBL
Match: A0A6J1CMV4 (probable polygalacturonase At1g80170 OS=Momordica charantia OX=3673 GN=LOC111013063 PE=3 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.4e-189
Identity = 327/408 (80.15%), Postives = 367/408 (89.95%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKT 60
           M AF +P VIFGLV A+ FT GF +EN+FNVMSYGAV G+  DSS A+LKAWKAACSSKT
Sbjct: 1   MGAFAVPAVIFGLVCAVTFTIGFSKENVFNVMSYGAVEGTTRDSSHAILKAWKAACSSKT 60

Query: 61  ESSMVLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGI 120
           ESS VLIPK  T++VKPI+L GPCRA SITFMI G IVAPTSP EW   D+SQWLAFEG+
Sbjct: 61  ESSTVLIPKRHTLLVKPIVLRGPCRANSITFMIHGEIVAPTSPGEWTRTDQSQWLAFEGV 120

Query: 121 SRLSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINS 180
           SRL++TG+GIGKIDG+GT WW+QSCRDHP+L+GCTS+APTAMKIISC++ +LSNIHFINS
Sbjct: 121 SRLNVTGTGIGKIDGRGTRWWSQSCRDHPDLKGCTSLAPTAMKIISCNNTSLSNIHFINS 180

Query: 181 SQAHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYT 240
           SQ H+L+MG  R EIKNLVITAPESSPNTDGIHIHSSHNVII+NTTIGTGDDCVSIGDYT
Sbjct: 181 SQTHVLIMGSKRVEIKNLVITAPESSPNTDGIHIHSSHNVIIKNTTIGTGDDCVSIGDYT 240

Query: 241 SHVNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQ 300
           S+VNISHI+CGPGHGISIGSLGRSGNFVQVEDI VS++YFKGTTNGARIKTWQIGRGNI+
Sbjct: 241 SNVNISHIRCGPGHGISIGSLGRSGNFVQVEDIRVSNVYFKGTTNGARIKTWQIGRGNIR 300

Query: 301 RVTFENLHFESVHNPLIIDQNYG--------KHTGVRIANISINNLFGTSMSNVAINLNC 360
           RVTF+NL+FESV+NP IIDQNYG        K TGV IAN+SINNLFGTS+SNVAINLNC
Sbjct: 301 RVTFQNLYFESVNNPFIIDQNYGNLGGLSNEKQTGVHIANVSINNLFGTSISNVAINLNC 360

Query: 361 SRSVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
           SRSVACTGI+LKSIQL+S NSGQKVTSSC+NA+GF+FGVVQPEPCLQI
Sbjct: 361 SRSVACTGILLKSIQLKSANSGQKVTSSCLNAHGFSFGVVQPEPCLQI 408

[Close]

BLAST of Clc11G03190 vs. ExPASy TrEMBL
Match: A0A5A7V0D8 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001680 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.9e-168
Identity = 314/428 (73.36%), Postives = 338/428 (78.97%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKT 60
           M AF  P+  FGLVYAI+F +GFPEE IFNV+SYGAVGGSNTDSSQA+ KAWKAAC+SKT
Sbjct: 1   MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVVSYGAVGGSNTDSSQAISKAWKAACNSKT 60

Query: 61  ESSMVLIPKGQTIMVKPILLSGPCRAKSITFM---------------------------- 120
           +SS VLIPK QT+MVKPILLSGPCRAKSITFM                            
Sbjct: 61  KSSTVLIPKRQTVMVKPILLSGPCRAKSITFMVKKNRDFPLMIKSFLEYYLSSGRCKLSQ 120

Query: 121 IDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSCRDHPNLE 180
           I+GVIVAPTSP EWAG DKS WLAF+GISRLSITGSGIGKIDG+GTGWWNQSCRDHP+L 
Sbjct: 121 INGVIVAPTSPKEWAGTDKSLWLAFKGISRLSITGSGIGKIDGRGTGWWNQSCRDHPSLP 180

Query: 181 GCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPESSPNTDGI 240
                   A KIISC+D NLSN+HFINSSQAH+LLM C RTEIKNLVITAPESSPNTDGI
Sbjct: 181 -----LLQATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI 240

Query: 241 HIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSGNFVQVED 300
           HIHSSHN+II+NTTIGTGDDCVS GDYTSHVNISHIKCGPGHGISIGSLG+SGNFVQVED
Sbjct: 241 HIHSSHNIIIKNTTIGTGDDCVSTGDYTSHVNISHIKCGPGHGISIGSLGKSGNFVQVED 300

Query: 301 ISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNYGKHTGVRIAN 360
           ISVS+IYFKGTTN ARIKTWQ                                +GVRIAN
Sbjct: 301 ISVSNIYFKGTTNRARIKTWQ-------------------------------QSGVRIAN 360

Query: 361 ISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVV 401
           +SI NLFGTSMSNVAINLNCSRSVACTGI+LKSIQLQSVNSGQKVTSSCIN +GFAFGVV
Sbjct: 361 VSIKNLFGTSMSNVAINLNCSRSVACTGILLKSIQLQSVNSGQKVTSSCINVHGFAFGVV 392

[Close]

BLAST of Clc11G03190 vs. ExPASy TrEMBL
Match: A0A5D3BEX0 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00230 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 6.1e-145
Identity = 279/412 (67.72%), Postives = 308/412 (74.76%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLK---------- 60
           M AF  P+  FGLVYAI+F +GFPEE IFNVMS         +++Q VL           
Sbjct: 1   MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSMELW----EEATQIVLNKFVRVFSYKW 60

Query: 61  --AWKAACSSKTESSMVLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAG 120
              W+  C      S     + +  ++K   + G C+       I+GVIVAPTSP EWAG
Sbjct: 61  RVGWEQGCEEFCSDSTGKFWE-RVALLKSYSIVGRCKLS----QINGVIVAPTSPKEWAG 120

Query: 121 IDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCS 180
            DKS WLAF+GISRLSITGSGIGKIDG+GTGWWNQSCRDHP+LEG T IAPTA KIISC+
Sbjct: 121 TDKSLWLAFKGISRLSITGSGIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCN 180

Query: 181 DANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIG 240
           D NLSN+HFINSSQAH+LLM C RTEIKNLVITAPESSPNTDGIHIHSSHN+II+NTTIG
Sbjct: 181 DTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIG 240

Query: 241 TGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGAR 300
           TGDDCVS GDYTSHVNISHIKCGPGHGISIGSLG+SGNFVQVEDISVS+IYFKGTTN AR
Sbjct: 241 TGDDCVSTGDYTSHVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRAR 300

Query: 301 IKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNYGKHTGVRIANISINNLFGTSMSNVAI 360
           IKTWQ                                +GVRIAN+SI NLFGTSMSNVAI
Sbjct: 301 IKTWQ-------------------------------QSGVRIANVSIKNLFGTSMSNVAI 360

Query: 361 NLNCSRSVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
           NLNCSRSVACTGI+LKSIQLQSVNSGQKVTSSCIN +GFAFGVVQP+PCLQI
Sbjct: 361 NLNCSRSVACTGILLKSIQLQSVNSGQKVTSSCINVHGFAFGVVQPKPCLQI 372

[Close]

BLAST of Clc11G03190 vs. ExPASy TrEMBL
Match: A0A1S4E1D2 (probable polygalacturonase At1g80170 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497273 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.8e-142
Identity = 250/294 (85.03%), Postives = 270/294 (91.84%), Query Frame = 0


Query: 1   MDAFIIPVVIFGLVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKT 60
           M AF  P+  FGLVYAI+F +GFPEE IFNVMSYGAVGGSNTDSSQA+ +AWKAAC+SKT
Sbjct: 1   MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKT 60

Query: 61  ESSMVLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGI 120
           +SS VLIPK QT+MVKPILLSGPCR KSITFMI+GVI+APTSP EWAG DKS WLAFEGI
Sbjct: 61  KSSTVLIPKRQTVMVKPILLSGPCRVKSITFMINGVIMAPTSPKEWAGTDKSLWLAFEGI 120

Query: 121 SRLSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINS 180
           SRLSITGS IGKIDG+GTGWWNQSCRDHP+LEG T IAPTA KIISC+D NLSN+HFINS
Sbjct: 121 SRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINS 180

Query: 181 SQAHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYT 240
           SQAH+LLM C RTEIKNLVITAPESSPNTDGIHIHSSHN+II+NTTIGTGDDCVS GDYT
Sbjct: 181 SQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYT 240

Query: 241 SHVNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQI 295
           S VNISHIKCGPGHGISIGSLG+SGNFVQVEDISVS+IYFKGTTN ARIKTWQ+
Sbjct: 241 SRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV 294

[Close]

BLAST of Clc11G03190 vs. ExPASy TrEMBL
Match: A0A0A0LF63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006210 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 8.5e-139
Identity = 252/321 (78.50%), Postives = 270/321 (84.11%), Query Frame = 0


Query: 81  SGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGW 140
           SG C+       I+GVIVAPTSP EWAG DKS WLA EGISRL I GSGIGKIDG+GTGW
Sbjct: 12  SGRCKLS----QINGVIVAPTSPKEWAGTDKSLWLALEGISRLRINGSGIGKIDGRGTGW 71

Query: 141 WNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVI 200
           WNQSCRDHPNLEGCTSIAPTAMKIISC+D NLSN+HFINSSQA +LLMGC+RTEIKNLVI
Sbjct: 72  WNQSCRDHPNLEGCTSIAPTAMKIISCNDPNLSNLHFINSSQALVLLMGCIRTEIKNLVI 131

Query: 201 TAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGS 260
           TAPE SPNTDGIHIHSSHN+IIRNTTIGTGDDCVSIGDYTS +NISHIKCGPGHGISIGS
Sbjct: 132 TAPERSPNTDGIHIHSSHNIIIRNTTIGTGDDCVSIGDYTSRMNISHIKCGPGHGISIGS 191

Query: 261 LGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQ 320
           LGR GNFVQVEDISVS+IYFKGTTNGARIKTWQ    N    + +               
Sbjct: 192 LGRGGNFVQVEDISVSNIYFKGTTNGARIKTWQFSALNYSAYSAQKFFI----------- 251

Query: 321 NYGKHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTG-IMLKSIQLQSVNSGQKVTS 380
            + K +GV IAN+SI NLFGTSMSNVAINLNCSRSVACTG I+LKSIQLQSVNSGQKVTS
Sbjct: 252 -FSKQSGVHIANVSIKNLFGTSMSNVAINLNCSRSVACTGSILLKSIQLQSVNSGQKVTS 311

Query: 381 SCINAYGFAFGVVQPEPCLQI 401
            CI A+GFAFGVVQP+PCLQI
Sbjct: 312 GCIIAHGFAFGVVQPKPCLQI 316

[Close]

BLAST of Clc11G03190 vs. TAIR 10
Match: AT1G80170.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 321.2 bits (822), Expect = 1.1e-87
Identity = 165/381 (43.31%), Postives = 234/381 (61.42%), Query Frame = 0


Query: 26  ENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQTIMVKPILLSGPCR 85
           E + +V ++GA G   TD ++A   AWK ACSSK + + +L+P+  T +++PI LSGPC+
Sbjct: 50  ERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVK-TRILVPENYTCLLRPIDLSGPCK 109

Query: 86  AKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGTGWWNQSC 145
           A+ +T  I G I+AP  PD W G+++ +WL F G+SRL++ G   G ++G G  WW +SC
Sbjct: 110 AR-LTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGG--GTVNGMGQEWWERSC 169

Query: 146 RDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNLVITAPES 205
           + H +   C   APTA+    C +  + N++ I+S Q HI L  C R  I  L + AP +
Sbjct: 170 K-HNHSNPCRG-APTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPAT 229

Query: 206 SPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISIGSLGRSG 265
           SPNTDGIHI  S  ++I NTT+ TGDDC+SI   ++ ++IS+I CGPGHGISIGSLG+S 
Sbjct: 230 SPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSK 289

Query: 266 NFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLIIDQNY--- 325
           ++ +V DI+V       T NG RIKTWQ G G + ++ F N+   +V NP+IIDQ Y   
Sbjct: 290 SWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDS 349

Query: 326 -----GKHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQSVNSGQKV 385
                 + + + I NIS  ++ GTS S  AI ++CS S  C  I+L+ I L+  N     
Sbjct: 350 RKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFT 409

Query: 386 TSSCINAYGFAFGVVQPEPCL 399
            S C  AYG + G V P PCL
Sbjct: 410 ESFCWEAYGSSSGQVYPPPCL 424

[Close]

BLAST of Clc11G03190 vs. TAIR 10
Match: AT3G15720.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 289.3 bits (739), Expect = 4.8e-78
Identity = 160/400 (40.00%), Postives = 226/400 (56.50%), Query Frame = 0


Query: 13  LVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQT 72
           L +++ F + F   N  +V  +GAVG   TD SQA LKAW+A CS  T     ++P G T
Sbjct: 8   LNFSLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSG-TGDGQFVVPAGMT 67

Query: 73  IMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGK 132
            M++P+   G C++  +   + G +VAP S   W G DK QW+ F  I  L I G   G+
Sbjct: 68  FMLQPLKFQGSCKSTPVFVQMLGKLVAP-SKGNWKG-DKDQWILFTDIEGLVIEGD--GE 127

Query: 133 IDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLR 192
           I+GQG+ WW                 PTA+K  SC++  LS +  ++S  AHI +  C  
Sbjct: 128 INGQGSSWWEHK-----------GSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNY 187

Query: 193 TEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGP 252
             I +L I APESSPNTDGI + +S NV+I++  I TGDDC++I   TS+++IS I CGP
Sbjct: 188 VTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGP 247

Query: 253 GHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESV 312
           GHGISIGSLG+ G    VE++ V +  F+GT NGARIKTWQ G G  + +TF  +  ++V
Sbjct: 248 GHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNV 307

Query: 313 HNPLIIDQNYG----------KHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIM 372
            NP+IIDQ Y           K + V ++ +  +N  GTS S   ++  CS  V CT I 
Sbjct: 308 ENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIF 367

Query: 373 LKSIQLQ--SVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
           L+ ++++  S  SGQ     C+N  G +   V    CL++
Sbjct: 368 LRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLEL 391

[Close]

BLAST of Clc11G03190 vs. TAIR 10
Match: AT1G80140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 279.6 bits (714), Expect = 3.8e-75
Identity = 144/343 (41.98%), Postives = 205/343 (59.77%), Query Frame = 0


Query: 65  VLIPKGQTIMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKS--QWLAFEGISR 124
           V +P G+  ++  +  +GPC  K + F+IDG ++A + P +W   +     WL F+ +  
Sbjct: 4   VNVPAGKVFLLNSLHFTGPCIPKPLLFIIDGEMIAQSDPQKWGNGENGVIPWLIFDQVDG 63

Query: 125 LSITGSGIGKIDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQ 184
           L+I G G+  +DGQG  WW+  CRDHP            M   +C +  L ++ F NS+Q
Sbjct: 64  LAIVGRGL--LDGQGKSWWDIHCRDHPG---------PMMTFSNCGNVTLKSLRFRNSAQ 123

Query: 185 AHILLMGCLRTEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSH 244
            H+L+MG     I ++ IT+PE+SPNTDGIHI SS  V I ++ I TGDDCVSIGD  ++
Sbjct: 124 THVLVMGSQNVYIDDIKITSPEASPNTDGIHITSSTAVSINHSDIATGDDCVSIGDQVNN 183

Query: 245 VNISHIKCGPGHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRV 304
           +N++ + CGPGHG+SIGSLGR G  V VE+I VS + F GTTNGARIKTW  G G ++ +
Sbjct: 184 LNVTFMNCGPGHGVSIGSLGRGGTEVTVENIRVSHVNFTGTTNGARIKTWPGGTGYVRGI 243

Query: 305 TFENLHFESVHNPLIIDQNYG-------KHTGVRIANISINNLFGTSMSNVAINLNCS-R 364
            F ++ F SV NP+IIDQ YG          GV I  +    + GTS + VA+ L CS  
Sbjct: 244 EFFDIRFSSVQNPIIIDQFYGCAPTCVETMKGVHIEKVRYMKMSGTSATKVAMKLECSGE 303

Query: 365 SVACTGIMLKSIQLQSVNSGQKVTSSCINAYGFAFGVVQPEPC 398
           SV C+ + ++ I L   +    V+S C  A+G A G+++P  C
Sbjct: 304 SVPCSNLFMRDIDLSPADGIDSVSSLCSFAHGSAQGIIRPLSC 335

[Close]

BLAST of Clc11G03190 vs. TAIR 10
Match: AT3G15720.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 279.3 bits (713), Expect = 5.0e-75
Identity = 158/400 (39.50%), Postives = 223/400 (55.75%), Query Frame = 0


Query: 13  LVYAIVFTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQT 72
           L +++ F + F   N  +V  +GAVG   TD SQA LKAW+A CS  T     ++P G T
Sbjct: 7   LNFSLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSG-TGDGQFVVPAGMT 66

Query: 73  IMVKPILLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGK 132
            M++P+   G C++  +   + G +VAP S   W G DK QW+ F  I  L I G   G+
Sbjct: 67  FMLQPLKFQGSCKSTPVFVQMLGKLVAP-SKGNWKG-DKDQWILFTDIEGLVIEGD--GE 126

Query: 133 IDGQGTGWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLR 192
           I+GQG+ WW                 PT     SC++  LS +  ++S  AHI +  C  
Sbjct: 127 INGQGSSWWEHK-----------GSRPT---FRSCNNLRLSGLTHLDSPMAHIHISECNY 186

Query: 193 TEIKNLVITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGP 252
             I +L I APESSPNTDGI + +S NV+I++  I TGDDC++I   TS+++IS I CGP
Sbjct: 187 VTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGP 246

Query: 253 GHGISIGSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESV 312
           GHGISIGSLG+ G    VE++ V +  F+GT NGARIKTWQ G G  + +TF  +  ++V
Sbjct: 247 GHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNV 306

Query: 313 HNPLIIDQNYG----------KHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIM 372
            NP+IIDQ Y           K + V ++ +  +N  GTS S   ++  CS  V CT I 
Sbjct: 307 ENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIF 366

Query: 373 LKSIQLQ--SVNSGQKVTSSCINAYGFAFGVVQPEPCLQI 401
           L+ ++++  S  SGQ     C+N  G +   V    CL++
Sbjct: 367 LRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLEL 387

[Close]

BLAST of Clc11G03190 vs. TAIR 10
Match: AT1G70500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-74
Identity = 153/384 (39.84%), Postives = 227/384 (59.11%), Query Frame = 0


Query: 19  FTEGFPEENIFNVMSYGAVGGSNTDSSQAVLKAWKAACSSKTESSMVLIPKGQTIMVKPI 78
           FT  +  +N+ NV S+ A G   +D +QA ++AW  ACS+   +S++L+P+G++ +V   
Sbjct: 57  FTSQYSGKNLVNVDSFNASGDGVSDDTQAFIRAWTMACSA--PNSVLLVPQGRSYLVNAT 116

Query: 79  LLSGPCRAKSITFMIDGVIVAPTSPDEWAGIDKSQWLAFEGISRLSITGSGIGKIDGQGT 138
              GPC+ K I   IDG I+AP  P +W       WL F  +  +   G+G+  IDG GT
Sbjct: 117 KFDGPCQEKLI-IQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGV--IDGSGT 176

Query: 139 GWWNQSCRDHPNLEGCTSIAPTAMKIISCSDANLSNIHFINSSQAHILLMGCLRTEIKNL 198
            WW  SC+ + +   C   APTA+ I S S+  +  +   NS Q H+++       I  +
Sbjct: 177 KWWAASCKKNKS-NPCVG-APTALTIYSSSNVYVRGLTIRNSQQMHLIIQRSTTVRISRV 236

Query: 199 VITAPESSPNTDGIHIHSSHNVIIRNTTIGTGDDCVSIGDYTSHVNISHIKCGPGHGISI 258
           ++T+P  SPNTDGIHI +S +V+++++ I TGDDCVSI + ++ + +  I CGPGHGISI
Sbjct: 237 MVTSPGDSPNTDGIHITASTDVVVQDSKISTGDDCVSIVNGSAKIKMKRIYCGPGHGISI 296

Query: 259 GSLGRSGNFVQVEDISVSDIYFKGTTNGARIKTWQIGRGNIQRVTFENLHFESVHNPLII 318
           GSLG+  +   V  + +   + K TTNG RIKTWQ G G ++ V FEN+  + V NP+II
Sbjct: 297 GSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTWQGGNGYVKGVRFENVVMQDVANPIII 356

Query: 319 DQNY--------GKHTGVRIANISINNLFGTSMSNVAINLNCSRSVACTGIMLKSIQLQS 378
           DQ Y         + + V I+ I   N+ GT+ S+ AIN  CS +V C+ I+L +I L+ 
Sbjct: 357 DQFYCDSPSTCQNQTSAVHISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNINLEG 416

Query: 379 VNSGQKVTSSCINAYGFAFGVVQP 395
            N G KV + C +A GF +GVV P
Sbjct: 417 -NDG-KVEAYCNSAEGFGYGVVHP 431

The following BLAST results are available for this feature:

BLAST of Clc11G03190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143115.1	2.8e-189	80.15	probable polygalacturonase At1g80170 [Momordica charantia]	[more]
KAA0061603.1	8.0e-168	73.36	putative polygalacturonase [Cucumis melo var. makuwa]	[more]
TYJ97813.1	1.3e-144	67.72	putative polygalacturonase [Cucumis melo var. makuwa]	[more]
XP_016902034.1	9.9e-142	85.03	PREDICTED: probable polygalacturonase At1g80170 isoform X1 [Cucumis melo]	[more]
KAF3453693.1	2.0e-134	59.35	hypothetical protein FNV43_RR04134 [Rhamnella rubrinervis]	[more]

BLAST of Clc11G03190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AJ5	1.6e-86	43.31	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g8017...	[more]
Q9LW07	6.8e-77	40.00	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g1572...	[more]
O23147	1.7e-72	39.68	Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1	[more]
P48978	3.9e-72	39.90	Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1	[more]
Q9SFB7	6.2e-70	37.43	Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2	[more]

BLAST of Clc11G03190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMV4	1.4e-189	80.15	probable polygalacturonase At1g80170 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A5A7V0D8	3.9e-168	73.36	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3BEX0	6.1e-145	67.72	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S4E1D2	4.8e-142	85.03	probable polygalacturonase At1g80170 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LF63	8.5e-139	78.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006210 PE=3 SV=1	[more]

BLAST of Clc11G03190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80170.1	1.1e-87	43.31	Pectin lyase-like superfamily protein	[more]
AT3G15720.1	4.8e-78	40.00	Pectin lyase-like superfamily protein	[more]
AT1G80140.1	3.8e-75	41.98	Pectin lyase-like superfamily protein	[more]
AT3G15720.2	5.0e-75	39.50	Pectin lyase-like superfamily protein	[more]
AT1G70500.1	3.2e-74	39.84	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 190..216 e-value: 1000.0 score: 7.1 coord: 270..291 e-value: 550.0 score: 9.1 coord: 299..332 e-value: 3100.0 score: 3.7 coord: 217..238 e-value: 760.0 score: 8.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 20..397 e-value: 1.7E-105 score: 355.4
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 56..383 e-value: 5.9E-75 score: 252.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 247..260
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 20..390
None	No IPR available	PANTHER	PTHR31375:SF229	POLYGALACTURONASE-LIKE	coord: 20..390
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 13..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G03190.1	Clc11G03190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004650	polygalacturonase activity