Clc11G01720 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G01720
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Replication protein A subunit
Location	ClcChr11: 1707003 .. 1711844 (+)
RNA-Seq Expression	Clc11G01720
Synteny	Clc11G01720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCATCTTTTCATCATCGAAGAAAAGGAAACCGCCATGAGATCCCCGCGCATATATAAACTCACGTCCCGCTGAAAGCTGATGTTTGAAGAGTTCCGACCGAGGACTGCACATTTTCATCTCATATCCTCGCCGTCGGTAACATATTCCGAATTTTCTCTGTAATTAAGCTTCATTTCCATACCCTAATCACTCTCCCCATTCTTTTATTCAACTTCAATTCCTTTTGCATTGCTTCTCAATCTTACTTTCTTTTCCATTTTCCTAGGGCTTTCATCAGTTTCTTTGTGATTCTCTACTTTCTTTTCTCGATTCATTCCTGAGCTCTCTTTCGGTCGTATCTGCATCATGCCGGTGCATCTCACACCCAATGCAATCTCTGCCATTGTCGCTGGTGACGTTAATTCCAAGCCTCTGGTGCAGGTCCTAGATATCAAGCTGATTGGTAACGCGCAGGAGAGGTACAGCCTCTTGATCTCCGATGCGGTTTCTGCTGAGCAGGCTATGCTCGCAACTCAGCTTAATGATATTGTTAAGACTGGACGAGTCAAGAAAGGATCCGTTATCCAGTTGATCGATTATGTCTGCAGTCCCATCAAGAACCGCAAGTTCGTTCTCTCCCTGTACTTCATTAATTACTTTTCGTCATCGATTATTACAATAAGTGTGTTGAAGAAATCTAGTTGTATGTGTTGTTATTGTTCATTGTAACTTGCTTACTGGCCTTCTCGGACAACGTGATGTAAGTTTTGTAACATTAGGTGTGCGTTTTAAGCTTTGAGATGAAACATTTAGAGATTCATAGCTGAAACGGAGAAATCGTTATTTTTCTTTGCATTGGAAGCAGTTCGTATGCTTGTTTGAAATGATAGGTGTATGTACGAATTACTGTCTAACGTTGATACTAGTGTATTAAATTTTAATGATCGGTTAATCGTCAATTTAAATTATTAAGTGGTTTCGTGTTGATAGATTTCTGTTCTCTACTTCTCTTTTTGTTCAAATCTGTGTATATGAACACATCGTAGGAGAAAATGTTCTATTGTCAGTTTATATGCTAGTTTGAAATTTTAGGTGCATGCGTGAATTACTGTCTTAGGGTTTATTAAATTTCAATCGTTGATTGATTGTACGATTGAAATGTTAGGTTTGCATACAAGTGGCTCAGTGTTGATAGATTTATGTTCTCTCCTTTTGTTCTGGTTCAATTCTGTGTTATGAACACATCATGCTAAATGAGGTTGTATAGTCAGTTTACATACTTGTTTGAGATGTTAGGTTCATGCATGAATTACTGTCTAAGGTTGATAGAGTTTATTAAATTGTAACCATTGATCAATTGTCTATTTGAACTGTCAGTTCTGTACACAAGTGGTTTATTGTTGAAAGATTGTTGTTCTCTCCATTTGTTCCTGTGAAAATCTTTGTATGTGAACACATCATGGTGTAAAAGATTCTATCATCAGTTTACATACCTGTTTGAAAGTTAGGTGGACTGGATGTATGTACTATCTAAAATTGGTTCAGTTTATTAAATTTTATTTGTTGATTAATTGTCCATTTGAATTGTTATGTTTGTACAGAGATGCTGATAGATTGCTTTTTGCTCCTTTGTTATTGTTAAAATTTGTGTATATGAACACACCAGGGGAAAACATGAATGATTTAATGTTTAAGATTGATACTGTTTATTAAATATTAATTTTAATCTTAACCATTGATTGATTGTCCATTTGAATTGTTAGGTCTTACACAACTGGTTTTAGGTCTGTACACAGGTGGTTTAGTACTGATAGATTGTCGTTCTCTGCTTTTATTCTTGTTAAATTCTGTGTATATGAACACATCATGGGGACAAAAGGGTCCGGTTGTTACTTTATATGCTTGTCTGAAATGTTTGGTCCATGCATGAAATACTACCTATGGCAGATACGGTTTATTAAACTTCAATCATTGATTGATTGTCCATTTGAGTTGTTGTAATTTACACAAGTGGTTTAGTGCCATAGATTTCTGTTCTCTCTTTTTGTCTTGTTAAAATTTGTGGAACAAGGTCTTATTGTCAGTTTATTTGCTTGTTTTGAATTGGTAGGTGCATGCATGAATTATTGTCTAAGGTTATAGAATTTCAAACACCTACTAATTGTCCATTTGAATCGTTTGGTTTGGGTTTAGTGCTAATCTCTCATATTGTGCATGTACATATTACATGAGAAAAGAAGGTCCTATTGTTAACTTTTAGCTGTACAAATAGTGTTGCTTTGTGGGATATGTCCTCATGATCATGTTGATAATGCTATTTTACTTTTCATTCTGTGCTGACCGTAGCTTTGTAATCTAGATGACTTGTAGATTCTTCTTAGTAGGATTGATGCTATAACTGAGCAGGAAAAATTTTACCCTTTGACTGAAATCTACTTCTGACTTGCATTGCTATAACCTAGAGTCAATGCTGATTTCTCTGCTATCTATCTAACTATGCAGGATTATTGTTGTGCTCTGCCTGGAAACTATTATATTGGATTGTGAGATAATCGGGAATCCAAAATCATCTGCTCAATCAGAGAATTTTGCACAAAAGGCAACGCGATCTGGAAATTTAGAGCAGCCTGCCAATGGTAATGGTCATTTGGGTGCCAGAAATCCAGTTCAGGATGTGCAGAGCTTCCAAGCTACAGTTCAACCTCCATATCAGCCACCTCCAAATTATAAAAATCACGGTGCAATCATTAAGAATGAGGCACCGGCTCGTATAATTCCCATAGCTGCGCTGAATCCTTATCAGGGACGATGGGCTATAAAAGCAAGAGTTACTGCAAAGGGTGATCTCCGTCGCTATAATAATGCGAAAGGAGATGGTAAAGTTTTCTCTTTTGACCTCCTTGATTCTGATGGAGGAGAGATACGTGTGACTTGCTTCAATGCTGTTGTGGATCGTTTCTACGAGGTCATAGAAGTTGGTAAAGTCTACATGATTTCTAAAGGTAGCCTAAAACCGGCGCGGAAGGATTTCAATCATCTAAAGAATGAATGGGAGGTTTTCTTGGAGGCATCTTCCACTGTGGAAGTTTGCCCAGATGAAGATGATACCATACCAAGACAGCAGTTCTCTTTTAGACCTATCAGTGATATTGAGAATGCTGAAACCAACTCTATTCTGGACGTTATTGGTATTGTAACATCTGTCAATCCATCAATTCCTGTTTTGAGAAAAAATGGTATGGAAACTCAAAGAAGAGTTGTGAATTTGAAGGATGCGTCTGGCAGGAGTATTGAGCTGACACTCTGGGGGGATTTTTGCAACAAAGAAGGTCAAAAATTGCAAGAAATAATTTACTCGGGCCTTTCTCCAGTGTTAGCTGTGAAATCTGGGAAGGTAAGTGATTTCACTGGGAAATCCATTGGGACAATTTCTTCTACTCAGCTTTTCATAAATCCAGATCTTTCTGAGGCTCACATCTTGAGGAACTGGTACGATGGTGGTGGGAAGAATACTACTTCTCTATCTATTTCTAAAGAAATCATGCCAGGATCTGCCAAGAATGAGATTCGGAAGACTGTGTCTCAGATTAAAGATGAAGGACTTGGCAGAGCTGATAAGCCAGATTGGATAACGGTGAAAGCAACAATATCCTTTATCAAAACAGATTCTTTCTGCTACACAGCATGTCCATTAATGATCGGAGATCGACAATGCAACAAGAAGGTGACTAGATCAGGAAACTCAAAGTGGCTGTGTGACAGGTGCAATCAAGAATTTGAGGATTGCGATTATAGATATCTTCTTCAAGCCCAAATCCAAGATCATACTGGATTGACATGGGTGACAGCCTTCCAGGAAACTGGTGAAGAGATTCTGGGTGTTTCAGCCAAGGAGTTGTACATGTTGAAGTATGAAGAGCAAGACGATGTCAAGTTTGGTGAAATAATAAGCAGCAAAATTTTCGATCAATTTCTTTTTAGGCTCAAAATTAAGGAGGAGTCGTATGGGGATGAACAGAGGGTGAAAAATACTGTAGTCAAGGCAGATAAGGTAAACTATTCTTCAGAAAGCAAATATATGTTGGATTTGCTTTCCAAATTTTCGAGGTAACTAATGATTTCTTGCTGACTAGGCGATCTCATTCTATCCAGAATTATTTCTATTGGAGAACGAACAGAAACATTTTCTTTCCCAGAAATTCGTAGAATAAAATGTATTTAGGTTAAACTTGTATATCACCATACATTGAGTGCTCAAGATTGGGAATATTAATAGTGCCCAAAATTTATAGCTTCAGTTCGTCAAATGATGGTTAGACTATAACCTGGGAACTGACTTATATTTGAGTGATCAGATACCTTTCAGTGTGTGCTTTTCTCGGTTGAATGCCGTGGAGGACTTCGAGCACATCAAGAAGGTACAGCATAAGTGATCAAACCAAATGAATTTTGAGCCAAATAGCAACTTTTATATTGAATATATCGAAGTTTCTAGTGAATTTACAGCAGGAGCCGCATATTGATTATTACACACAAAACACAGAAACAACCATTACAGACAATGGAACATCATGAATGGAAGAAAATGATAACATAATTGGTGGAATCTCATTCTCCGCCAGCTCAAGTCCGCTTGACGGGATCGAAATTGGAGACGCCGATAACTGCACCCAAGATAGCAGTGACGACTACTCCACCGGCGGCAATGCTGAGCAAGAAATTCTTTAGAGAAGGACTAACTCCAGGCCCGGCAGCTTCAGCCACCTCAGGAAGCACCATGGAAGCCGTCAGTGCAGTTGCAGCGAGTCCAGCAACTGCCTTCTCCTTCAAAGAAGCTCGCACTTGA

mRNA sequence

TCTCTCTCTCTCTCTCTCATCTTTTCATCATCGAAGAAAAGGAAACCGCCATGAGATCCCCGCGCATATATAAACTCACGTCCCGCTGAAAGCTGATGTTTGAAGAGTTCCGACCGAGGACTGCACATTTTCATCTCATATCCTCGCCGTCGGGCTTTCATCAGTTTCTTTGTGATTCTCTACTTTCTTTTCTCGATTCATTCCTGAGCTCTCTTTCGGTCGTATCTGCATCATGCCGGTGCATCTCACACCCAATGCAATCTCTGCCATTGTCGCTGGTGACGTTAATTCCAAGCCTCTGGTGCAGGTCCTAGATATCAAGCTGATTGGTAACGCGCAGGAGAGGTACAGCCTCTTGATCTCCGATGCGGTTTCTGCTGAGCAGGCTATGCTCGCAACTCAGCTTAATGATATTGTTAAGACTGGACGAGTCAAGAAAGGATCCGTTATCCAGTTGATCGATTATGTCTGCAGTCCCATCAAGAACCGCAAGATTATTGTTGTGCTCTGCCTGGAAACTATTATATTGGATTGTGAGATAATCGGGAATCCAAAATCATCTGCTCAATCAGAGAATTTTGCACAAAAGGCAACGCGATCTGGAAATTTAGAGCAGCCTGCCAATGGTAATGGTCATTTGGGTGCCAGAAATCCAGTTCAGGATGTGCAGAGCTTCCAAGCTACAGTTCAACCTCCATATCAGCCACCTCCAAATTATAAAAATCACGGTGCAATCATTAAGAATGAGGCACCGGCTCGTATAATTCCCATAGCTGCGCTGAATCCTTATCAGGGACGATGGGCTATAAAAGCAAGAGTTACTGCAAAGGGTGATCTCCGTCGCTATAATAATGCGAAAGGAGATGGTAAAGTTTTCTCTTTTGACCTCCTTGATTCTGATGGAGGAGAGATACGTGTGACTTGCTTCAATGCTGTTGTGGATCGTTTCTACGAGGTCATAGAAGTTGGTAAAGTCTACATGATTTCTAAAGGTAGCCTAAAACCGGCGCGGAAGGATTTCAATCATCTAAAGAATGAATGGGAGGTTTTCTTGGAGGCATCTTCCACTGTGGAAGTTTGCCCAGATGAAGATGATACCATACCAAGACAGCAGTTCTCTTTTAGACCTATCAGTGATATTGAGAATGCTGAAACCAACTCTATTCTGGACGTTATTGGTATTGTAACATCTGTCAATCCATCAATTCCTGTTTTGAGAAAAAATGGTATGGAAACTCAAAGAAGAGTTGTGAATTTGAAGGATGCGTCTGGCAGGAGTATTGAGCTGACACTCTGGGGGGATTTTTGCAACAAAGAAGGTCAAAAATTGCAAGAAATAATTTACTCGGGCCTTTCTCCAGTGTTAGCTGTGAAATCTGGGAAGGTAAGTGATTTCACTGGGAAATCCATTGGGACAATTTCTTCTACTCAGCTTTTCATAAATCCAGATCTTTCTGAGGCTCACATCTTGAGGAACTGGTACGATGGTGGTGGGAAGAATACTACTTCTCTATCTATTTCTAAAGAAATCATGCCAGGATCTGCCAAGAATGAGATTCGGAAGACTGTGTCTCAGATTAAAGATGAAGGACTTGGCAGAGCTGATAAGCCAGATTGGATAACGGTGAAAGCAACAATATCCTTTATCAAAACAGATTCTTTCTGCTACACAGCATGTCCATTAATGATCGGAGATCGACAATGCAACAAGAAGGTGACTAGATCAGGAAACTCAAAGTGGCTGTGTGACAGGTGCAATCAAGAATTTGAGGATTGCGATTATAGATATCTTCTTCAAGCCCAAATCCAAGATCATACTGGATTGACATGGGTGACAGCCTTCCAGGAAACTGGTGAAGAGATTCTGGGTGTTTCAGCCAAGGAGTTGTACATGTTGAAGTATGAAGAGCAAGACGATGTCAAGCTCAAAATTAAGGAGGAGTCGTATGGGGATGAACAGAGGGTGAAAAATACTGTAGTCAAGGCAGATAAGTGTGTGCTTTTCTCGGTTGAATGCCGTGGAGGACTTCGAGCACATCAAGAAGCTCAAGTCCGCTTGACGGGATCGAAATTGGAGACGCCGATAACTGCACCCAAGATAGCAGTGACGACTACTCCACCGGCGGCAATGCTGAGCAAGAAATTCTTTAGAGAAGGACTAACTCCAGGCCCGGCAGCTTCAGCCACCTCAGGAAGCACCATGGAAGCCGTCAGTGCAGTTGCAGCGAGTCCAGCAACTGCCTTCTCCTTCAAAGAAGCTCGCACTTGA

Coding sequence (CDS)

ATGCCGGTGCATCTCACACCCAATGCAATCTCTGCCATTGTCGCTGGTGACGTTAATTCCAAGCCTCTGGTGCAGGTCCTAGATATCAAGCTGATTGGTAACGCGCAGGAGAGGTACAGCCTCTTGATCTCCGATGCGGTTTCTGCTGAGCAGGCTATGCTCGCAACTCAGCTTAATGATATTGTTAAGACTGGACGAGTCAAGAAAGGATCCGTTATCCAGTTGATCGATTATGTCTGCAGTCCCATCAAGAACCGCAAGATTATTGTTGTGCTCTGCCTGGAAACTATTATATTGGATTGTGAGATAATCGGGAATCCAAAATCATCTGCTCAATCAGAGAATTTTGCACAAAAGGCAACGCGATCTGGAAATTTAGAGCAGCCTGCCAATGGTAATGGTCATTTGGGTGCCAGAAATCCAGTTCAGGATGTGCAGAGCTTCCAAGCTACAGTTCAACCTCCATATCAGCCACCTCCAAATTATAAAAATCACGGTGCAATCATTAAGAATGAGGCACCGGCTCGTATAATTCCCATAGCTGCGCTGAATCCTTATCAGGGACGATGGGCTATAAAAGCAAGAGTTACTGCAAAGGGTGATCTCCGTCGCTATAATAATGCGAAAGGAGATGGTAAAGTTTTCTCTTTTGACCTCCTTGATTCTGATGGAGGAGAGATACGTGTGACTTGCTTCAATGCTGTTGTGGATCGTTTCTACGAGGTCATAGAAGTTGGTAAAGTCTACATGATTTCTAAAGGTAGCCTAAAACCGGCGCGGAAGGATTTCAATCATCTAAAGAATGAATGGGAGGTTTTCTTGGAGGCATCTTCCACTGTGGAAGTTTGCCCAGATGAAGATGATACCATACCAAGACAGCAGTTCTCTTTTAGACCTATCAGTGATATTGAGAATGCTGAAACCAACTCTATTCTGGACGTTATTGGTATTGTAACATCTGTCAATCCATCAATTCCTGTTTTGAGAAAAAATGGTATGGAAACTCAAAGAAGAGTTGTGAATTTGAAGGATGCGTCTGGCAGGAGTATTGAGCTGACACTCTGGGGGGATTTTTGCAACAAAGAAGGTCAAAAATTGCAAGAAATAATTTACTCGGGCCTTTCTCCAGTGTTAGCTGTGAAATCTGGGAAGGTAAGTGATTTCACTGGGAAATCCATTGGGACAATTTCTTCTACTCAGCTTTTCATAAATCCAGATCTTTCTGAGGCTCACATCTTGAGGAACTGGTACGATGGTGGTGGGAAGAATACTACTTCTCTATCTATTTCTAAAGAAATCATGCCAGGATCTGCCAAGAATGAGATTCGGAAGACTGTGTCTCAGATTAAAGATGAAGGACTTGGCAGAGCTGATAAGCCAGATTGGATAACGGTGAAAGCAACAATATCCTTTATCAAAACAGATTCTTTCTGCTACACAGCATGTCCATTAATGATCGGAGATCGACAATGCAACAAGAAGGTGACTAGATCAGGAAACTCAAAGTGGCTGTGTGACAGGTGCAATCAAGAATTTGAGGATTGCGATTATAGATATCTTCTTCAAGCCCAAATCCAAGATCATACTGGATTGACATGGGTGACAGCCTTCCAGGAAACTGGTGAAGAGATTCTGGGTGTTTCAGCCAAGGAGTTGTACATGTTGAAGTATGAAGAGCAAGACGATGTCAAGCTCAAAATTAAGGAGGAGTCGTATGGGGATGAACAGAGGGTGAAAAATACTGTAGTCAAGGCAGATAAGTGTGTGCTTTTCTCGGTTGAATGCCGTGGAGGACTTCGAGCACATCAAGAAGCTCAAGTCCGCTTGACGGGATCGAAATTGGAGACGCCGATAACTGCACCCAAGATAGCAGTGACGACTACTCCACCGGCGGCAATGCTGAGCAAGAAATTCTTTAGAGAAGGACTAACTCCAGGCCCGGCAGCTTCAGCCACCTCAGGAAGCACCATGGAAGCCGTCAGTGCAGTTGCAGCGAGTCCAGCAACTGCCTTCTCCTTCAAAGAAGCTCGCACTTGA

Protein sequence

MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKATRSGNLEQPANGNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRPISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDGGGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQDDVKLKIKEESYGDEQRVKNTVVKADKCVLFSVECRGGLRAHQEAQVRLTGSKLETPITAPKIAVTTTPPAAMLSKKFFREGLTPGPAASATSGSTMEAVSAVAASPATAFSFKEART

Homology

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BLAST of Clc11G01720 vs. NCBI nr
Match: XP_011648589.2 (replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus])

HSP 1 Score: 1125.2 bits (2909), Expect = 0.0e+00
Identity = 575/646 (89.01%), Postives = 593/646 (91.80%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           +VKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
           T S NLEQPA  GNGHL ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHLKNEWEVFLEASSTVE+CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRVV LKDASGRS+ELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDL EAHILR WYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+PGSAKN+IRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 600
           TGEEILGVSAKELYMLKYEEQDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVV 600

Query: 601 KAD----------------KCVLFSVECRGGLRAHQEAQVRLTGSK 614
           KAD                K    + +C GGL AHQE + ++  +K
Sbjct: 601 KADRVNYSSESKYMLDLLSKFSRLNKDCLGGLWAHQEDKAKVIQTK 646

[Close]

BLAST of Clc11G01720 vs. NCBI nr
Match: KGN60516.1 (hypothetical protein Csa_019336 [Cucumis sativus])

HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 565/604 (93.54%), Postives = 578/604 (95.70%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           +VKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
           T S NLEQPA  GNGHL ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHLKNEWEVFLEASSTVE+CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRVV LKDASGRS+ELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDL EAHILR WYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+PGSAKN+IRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELYMLKYEEQDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. NCBI nr
Match: XP_008459663.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo])

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 562/604 (93.05%), Postives = 575/604 (95.20%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSE FAQKA
Sbjct: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
           T SGNLEQPA  GNGHL ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKN+APA IIP
Sbjct: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPACIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRVV LKDASGRS+ELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDL EAHILR WYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+PGSAKN+IRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELY+LKYE QDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. NCBI nr
Match: XP_038890007.1 (replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida] >XP_038890008.1 replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida] >XP_038890009.1 replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida])

HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 558/604 (92.38%), Postives = 573/604 (94.87%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGD+NSKPLVQVLDIKLIGNAQERYS+LISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDINSKPLVQVLDIKLIGNAQERYSILISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           ++KTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKS AQSENFA KA
Sbjct: 61  VIKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSYAQSENFALKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
           T S NLEQP   GNGH  ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP
Sbjct: 121 TPSRNLEQPVKVGNGHPSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVD F
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDSF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHLKNEWEVFLEASSTVE+CPDEDDTIPRQQFSFR 
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFRR 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWG+FC
Sbjct: 301 ISEIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGEFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEG+KLQEII SGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILR+WYDG
Sbjct: 361 NKEGKKLQEIIDSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRDWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKN+TSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNSTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW C+RCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWQCERCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELYMLKYEEQD+VK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDEVKFGEIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. NCBI nr
Match: KAG6599522.1 (Replication protein A 70 kDa DNA-binding subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1085.9 bits (2807), Expect = 0.0e+00
Identity = 552/604 (91.39%), Postives = 569/604 (94.21%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGN QERYSLLISDAVS EQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNTQERYSLLISDAVSTEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           IVKTGRVKKGSVIQLIDYVCSPIK+RK+IVVL LETIILD EIIGNPKSSAQSENFAQKA
Sbjct: 61  IVKTGRVKKGSVIQLIDYVCSPIKSRKVIVVLSLETIILDSEIIGNPKSSAQSENFAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
             SGNLEQPA  GN  + ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPAR+IP
Sbjct: 121 MPSGNLEQPAKVGNRLVSARNPVNNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARVIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHL NEWEVFLEASSTVE CPDEDDTIPRQQFSFRP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLNNEWEVFLEASSTVEHCPDEDDTIPRQQFSFRP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRV+NLKDASGRS+ELTLWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQ LQEII SGLSPVLAVKSGKVSDFTGKSIGTISSTQLF+NPDLSEA ILR+WYDG
Sbjct: 361 NKEGQNLQEIINSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFVNPDLSEALILRDWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIM GSAKNEIRK+VSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIMSGSAKNEIRKSVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELY+LKYE+QDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYILKYEQQDDVKFGEIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. ExPASy Swiss-Prot
Match: Q9SKI4 (Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA1A PE=1 SV=1)

HSP 1 Score: 860.9 bits (2223), Expect = 9.6e-249
Identity = 427/625 (68.32%), Postives = 513/625 (82.08%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG----NAQERYSLLISDAVSAEQAMLAT 60
           MPV LTPNAI+AI  GDVN KPL+QVL+IK+IG     +QERY  LISD VSA+ AM+A 
Sbjct: 1   MPVSLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 61  QLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENF 120
           QLND VK+G+ +KGS++QLIDY+CS +K RK+IVVL +ETI+   E IGNP    +++  
Sbjct: 61  QLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTE 120

Query: 121 AQKA-TRSGNLEQP----------------ANGNGHLGARNPVQDVQSFQATVQPPYQPP 180
           AQK  + +GN+  P                A   G +  +N   +  SF+ +VQP YQPP
Sbjct: 121 AQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRG-VNIQNQANNTPSFRPSVQPSYQPP 180

Query: 181 PNYKNHGAIIKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL 240
            +Y+NHG I+KNEAPAR+IPIAALNPYQGRWAIKARVTAKGD+RRYNNAKGDGKVFSFDL
Sbjct: 181 ASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDL 240

Query: 241 LDSDGGEIRVTCFNAVVDRFYEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASST 300
           LD DGGEIRVTCFNA+VDRFY+V EVGKVY+ISKGSLKPA+K+FNHLKNEWE+FLE++ST
Sbjct: 241 LDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTST 300

Query: 301 VEVCPDEDDTIPRQQFSFRPISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRV 360
           VE+CPDED +IP+QQFSFRPISDIENAE N+ILDVIG+VTSVNPS+P+LRKNGMET RR+
Sbjct: 301 VELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRI 360

Query: 361 VNLKDASGRSIELTLWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISST 420
           +NLKD SG+++E+TLWG+FCN++G++L+E++ S   PVLA+K+GKVSDF+GKS+GTISST
Sbjct: 361 LNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISST 420

Query: 421 QLFINPDLSEAHILRNWYDGGGKNTTSLSISKEIMPGS-AKNEIRKTVSQIKDEGLGRAD 480
           QLFINPD  EAH LR W+D GGK+T S SIS++ MPG  ++NEIRK VSQIK+EGLGR+D
Sbjct: 421 QLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSD 480

Query: 481 KPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYR 540
           KPDWITVKATISFIKTDSFCYTACPLMIGD+QCNKKVTRSG ++WLCDRCNQE ++CDYR
Sbjct: 481 KPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYR 540

Query: 541 YLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQDD---------------- 588
           YLLQ QIQDHTGLTW+TAFQETGEEI+G  AK+LY +KYE + +                
Sbjct: 541 YLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYM 600

[Close]

BLAST of Clc11G01720 vs. ExPASy Swiss-Prot
Match: Q6YZ49 (Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1A PE=1 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 2.8e-216
Identity = 366/630 (58.10%), Postives = 477/630 (75.71%), Query Frame = 0


Query: 5   LTPNAISAIVAGDVNSKPLVQVLDIKLIG------NAQERYSLLISDAVSAEQAMLATQL 64
           LTPN ++A +AGD N KP++Q+++++ +          ER+  ++SD  +A  A+ A QL
Sbjct: 6   LTPNGVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQL 65

Query: 65  NDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQ 124
           +D  ++G +++GS++QL +YV + +  R+IIV+L LE ++ +CEIIGNP + +++ +   
Sbjct: 66  SDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTALSETGSPIP 125

Query: 125 KATR-----------------SGNLEQPAN----------GNGHLGARNPVQDVQSFQAT 184
             TR                 S    +P++          GN    A  P   V  FQ T
Sbjct: 126 NPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPT 185

Query: 185 VQPPYQPPPNYKNHGAIIKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGD 244
           VQP Y+P PNYKNHGAI+KNEAPARIIPI+ALNPYQGRWAIKARVTAKGD+RRY+NAKGD
Sbjct: 186 VQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGD 245

Query: 245 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGKVYMISKGSLKPARKDFNHLKNEWE 304
           GKVFSFDLLDSDGGEIRVTCFNA++DRFYEV+EVGKVY++S+G+L+PA+K++NHL NEWE
Sbjct: 246 GKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWE 305

Query: 305 VFLEASSTVEVCPDEDDTIPRQQFSFRPISDIENAETNSILDVIGIVTSVNPSIPVLRKN 364
           + LE  STV++CPDE+ +IP Q+F FRPI++IE+A+ N+ILD+IG+VTSVNP   + RKN
Sbjct: 306 ILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSVNPCTTIQRKN 365

Query: 365 GMETQRRVVNLKDASGRSIELTLWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGK 424
           GMETQ+R +NLKD SGRS+E+T+WGDFCN+EG +LQ ++  G+ PVLAVK+GKVSDF+GK
Sbjct: 366 GMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGK 425

Query: 425 SIGTISSTQLFINPDLSEAHILRNWYDGGGKNTTSLSISKEIMPGSAKNEIRKTVSQIKD 484
           S+GTISSTQLFINPD +EAH LR W+D GG++ ++ SIS++I PG+++NEIRKTV+QIKD
Sbjct: 426 SVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASRNEIRKTVAQIKD 485

Query: 485 EGLGRADKPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWLCDRCNQE 544
           EGLG  DKPDWITVKAT+ F K +SF YTACP MIGDRQCNKKVT+S N  W CD+C++E
Sbjct: 486 EGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDRE 545

Query: 545 FEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQDD--------- 588
           FE+CDYRYLLQ QIQDH+G  WVTAFQE G+E+LG SA EL  LK  E            
Sbjct: 546 FEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKEREDPRFADTMLNCL 605

[Close]

BLAST of Clc11G01720 vs. ExPASy Swiss-Prot
Match: F4JSG3 (Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=3702 GN=RPA1E PE=2 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 5.6e-172
Identity = 320/677 (47.27%), Postives = 444/677 (65.58%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGNAQ----ERYSLLISDAVSAEQA 60
           M V LT  AI  I+ G+V ++    P++QV D+K I   Q    ER+ +++SD     Q 
Sbjct: 1   MEVSLTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQG 60

Query: 61  MLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQ 120
           ML T LN++VK G ++ GS+++L  +V   IK R+I++V  LE +    +IIG+P    +
Sbjct: 61  MLGTDLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGK 120

Query: 121 SENFAQKATRSG----------------NLEQPANGN-------GHLGARNPVQDVQSFQ 180
             +  Q+   SG                N  +P   N       G  G+  P     S +
Sbjct: 121 HND--QRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNAAISPQVGGTGSSVPASTTPSTR 180

Query: 181 ATVQP----------------------PYQPPPNYKNHGAIIKNEAPARIIPIAALNPYQ 240
           A   P                      P  PPP Y N G + +NEAP +IIP+ AL+PY 
Sbjct: 181 AYSNPSSGNGVTRQDYARDPPTSYPHQPQPPPPMYANRGPVARNEAPPKIIPVNALSPYS 240

Query: 241 GRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGK 300
           GRW IKARVT K  L++Y+N +G+GKVF+FDLLD+DGGEIRVTCFNAV D+FY+ I VG 
Sbjct: 241 GRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQIVVGN 300

Query: 301 VYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRPISDIENAE 360
           +Y+IS+GSL+PA+K+FNHL+N++E+ L+ +ST++ C +ED  IPR QF FR I DIE+ E
Sbjct: 301 LYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESME 360

Query: 361 TNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFCNKEGQKLQ 420
            N I+DVIGIV+S++P++ + RKNG  T +R + LKD SGRS+E+T+WGDFCN EGQ+LQ
Sbjct: 361 NNCIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQ 420

Query: 421 EIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDGGGKNTTSL 480
            +  SG+ PVLAVK+G++S+F GK++ TI S+QLFI+PD  EA  L+NW++  GK+   +
Sbjct: 421 SLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCI 480

Query: 481 SISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIG 540
           S+S+E   GS K ++RKT+SQIKDE LG ++KPDWITV ATI ++K D+FCYTACP+M G
Sbjct: 481 SLSRE-FSGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFCYTACPIMNG 540

Query: 541 DRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGV 600
           DR C+KKVT +G+  W C++C++  ++CDYRY+LQ QIQDHT LT VTAFQE GEEI+G+
Sbjct: 541 DRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGI 600

Query: 601 SAKELYMLKYEEQDD----------------VKLKIKEESYGDEQRVKNTVVKADKCVLF 609
           SAK+LY +K E +D+                 KLK+KEE++ DEQRVK TVVK DK + +
Sbjct: 601 SAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDK-LNY 660

[Close]

BLAST of Clc11G01720 vs. ExPASy Swiss-Prot
Match: Q9FHJ6 (Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=3702 GN=RPA1C PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 1.3e-168
Identity = 327/725 (45.10%), Postives = 436/725 (60.14%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGN-------AQERYSLLISDAVSA 60
           M V LT   +  ++ G+V S+    P++QV ++KLI +       +  RY  L+SD    
Sbjct: 1   MAVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDL 60

Query: 61  EQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKS 120
              ML T LN +V  G ++ GSVI+L  Y+C+ I+ R+I+V++ LE I+  C IIGNPK 
Sbjct: 61  AAGMLNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKE 120

Query: 121 SAQSE---------------NFAQKATR----------SGNLEQP--------------- 180
              S                +  Q+A R          S N  QP               
Sbjct: 121 PGHSSINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVS 180

Query: 181 AN-------------GNGHLGARNPVQDV------------------------------- 240
           AN             G   + A +P + V                               
Sbjct: 181 ANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPS 240

Query: 241 -------------------------QSFQATVQPPYQP--PPNYKNHGAIIKNEAPARII 300
                                     ++   VQ  YQP  PP Y N G + +NEAP RI 
Sbjct: 241 TRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRIN 300

Query: 301 PIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 360
           PIAALNPYQGRW IK RVT+K DLRR+NN +G+GK+FSFDLLD+DGGEIRVTCFN  VD+
Sbjct: 301 PIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQ 360

Query: 361 FYEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFR 420
           F++ I VG VY+IS+G+LKPA+K+FNHL N++E+ L+++ST++ C D D TIPR  F FR
Sbjct: 361 FFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCED-DGTIPRYHFHFR 420

Query: 421 PISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDF 480
            I DIEN E NS  DVIGIV+S++P++ ++RKN  E Q+R + LKD SGRS+E+T+WG+F
Sbjct: 421 NIGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNF 480

Query: 481 CNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYD 540
           CN EGQKLQ +  SG+ PVLA+K+G++ +F GK + TI ++Q FI PD  EA  LR WY+
Sbjct: 481 CNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYE 540

Query: 541 GGGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFC 588
             G+N    SIS+E   G  + E+RK ++QIKDE LG ++KPDWITV ATISF+K ++FC
Sbjct: 541 REGRNAHFTSISRE-FSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFC 600

[Close]

BLAST of Clc11G01720 vs. ExPASy Swiss-Prot
Match: Q65XV7 (Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1C PE=1 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.4e-146
Identity = 299/736 (40.62%), Postives = 420/736 (57.07%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVA---GDVNSKPLVQVLDIKLIGNAQ--------ERYSLLISDAVSA 60
           M   LTP A+ AI     G    +P++QV+D++ +            ER+ +++SD V+ 
Sbjct: 1   MEPQLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTPKPAERFRMMLSDGVNT 60

Query: 61  EQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPK- 120
           +Q+MLAT LN +VK   ++ G+V+QL D++C+ I+ ++II+V+ L+ +  DC +IGNPK 
Sbjct: 61  QQSMLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIVVKLDVLQNDCIVIGNPKH 120

Query: 121 ----------------SSAQSEN------------------------------------- 180
                           S AQ+ N                                     
Sbjct: 121 YEPKSLTKEQDPNLQASVAQTNNGTYSGGASMLGPSVAPRAEQAASNSSYGGPYNSAQGM 180

Query: 181 ------------------------FAQKATRSGNLEQPA--------------------N 240
                                    + + T + N+ QP                     N
Sbjct: 181 LGSSIGRTVEPGPANVSAVGSYGAISAQNTTNANMMQPTSQLNIMNANTMQPTSQLNTMN 240

Query: 241 GN-----GHLGARNPVQDVQSFQATV----------------QPPY-QPPPNYKNHGAII 300
            N       L + NP Q+ Q F A                  +P Y QPPP Y N G   
Sbjct: 241 ANTMQPTSQLSSLNPNQN-QRFAAPASGGVFGPPGNAYGQPSRPSYQQPPPVYMNRGPAS 300

Query: 301 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRV 360
           +N++  RIIPI ALNPYQ +W IKARVTAK D+R ++NA+  G VFSFDLLD+ GGEIR 
Sbjct: 301 RNDSATRIIPITALNPYQPKWTIKARVTAKSDIRHWSNARSSGTVFSFDLLDAQGGEIRA 360

Query: 361 TCFNAVVDRFYEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEAS-STVEVCPDEDD 420
            C+    D+F+  IEVG+VY+IS+GSLKPA+K +N L +++E+ L+   STVEVC D+D+
Sbjct: 361 QCWKESADKFFGQIEVGRVYLISRGSLKPAQKKYNTLNHDYEITLDIGLSTVEVCSDDDN 420

Query: 421 TIPRQQFSFRPISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGR 480
           +IPR Q++FR IS++EN    +I+D++G+VTSV+PS  ++RK G ET++R + LKD SGR
Sbjct: 421 SIPRLQYNFRQISELENMANETIVDLLGVVTSVSPSATIMRKIGTETRKRSIQLKDLSGR 480

Query: 481 SIELTLWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLS 540
           SIE+TLWG+FC+ EGQ+LQ    SG +P++A K  +V DF GKS+ TI STQL INPD  
Sbjct: 481 SIEVTLWGNFCDAEGQQLQLQCDSGSNPIIAFKGARVGDFNGKSVSTIGSTQLIINPDFP 540

Query: 541 EAHILRNWYDGGGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKAT 588
           E   LR WY   GK    +S+S+E++    + + RKT++QIKDE LGR +KPDWITVKA 
Sbjct: 541 EVERLRQWYMTEGKTAPCISLSREML-NMGRTDARKTIAQIKDENLGRLEKPDWITVKAA 600

[Close]

BLAST of Clc11G01720 vs. ExPASy TrEMBL
Match: A0A0A0LKL9 (Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_2G000250 PE=3 SV=1)

HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 565/604 (93.54%), Postives = 578/604 (95.70%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           +VKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
           T S NLEQPA  GNGHL ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP
Sbjct: 121 TPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHLKNEWEVFLEASSTVE+CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQFSFKP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRVV LKDASGRS+ELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDL EAHILR WYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+PGSAKN+IRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELYMLKYEEQDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. ExPASy TrEMBL
Match: A0A1S3CAT4 (Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103498706 PE=3 SV=1)

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 562/604 (93.05%), Postives = 575/604 (95.20%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSE FAQKA
Sbjct: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSETFAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
           T SGNLEQPA  GNGHL ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKN+APA IIP
Sbjct: 121 TPSGNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNDAPACIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSF+P
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEPCPDEDDTIPRQQFSFKP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRVV LKDASGRS+ELT+WGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDL EAHILR WYDG
Sbjct: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILREWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEI+PGSAKN+IRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKW+CDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELY+LKYE QDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYVLKYENQDDVKFGEIIRSTIFGQFLFRLKIKEEVYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. ExPASy TrEMBL
Match: A0A6J1G4P2 (Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111450710 PE=3 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 551/604 (91.23%), Postives = 569/604 (94.21%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGN QERYSLLISDAVS EQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNTQERYSLLISDAVSTEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           I+KTGRVKKGSVIQLIDYVCSPIK+RK+IVVL LETIILD EIIGNPKSSAQSENFAQKA
Sbjct: 61  IIKTGRVKKGSVIQLIDYVCSPIKSRKVIVVLSLETIILDSEIIGNPKSSAQSENFAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
             SGNLEQPA  GN  + ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPAR+IP
Sbjct: 121 MPSGNLEQPAKVGNRLVSARNPVNNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARVIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHL NEWEVFLEASSTVE CPDEDDTIPRQQFSFRP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLNNEWEVFLEASSTVEHCPDEDDTIPRQQFSFRP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRV+NLKDASGRS+ELTLWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQ LQEII SGLSPVLAVKSGKVSDFTGKSIGTISSTQLF+NPDLSEA ILR+WYDG
Sbjct: 361 NKEGQNLQEIINSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFVNPDLSEALILRDWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIM GSAKNEIRK+VSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIMSGSAKNEIRKSVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELY+LKYE+QDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYILKYEQQDDVKFGEIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. ExPASy TrEMBL
Match: A0A6J1KGE2 (Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111493656 PE=3 SV=1)

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 551/604 (91.23%), Postives = 568/604 (94.04%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGN QERYSLLISDAVS EQAMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNTQERYSLLISDAVSTEQAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           I+KTGRVKKGSVIQLIDYVCSPIK+RK+IVVL LETIILD EIIGNPKSSAQSEN AQKA
Sbjct: 61  IIKTGRVKKGSVIQLIDYVCSPIKSRKVIVVLSLETIILDSEIIGNPKSSAQSENVAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
             SGNLEQPA  GN  + ARNPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPAR+IP
Sbjct: 121 MPSGNLEQPAKVGNRLVSARNPVNNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARVIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPARKDFNHLKNEWEVFLEASSTVE CPDEDDTIPRQQFSFRP
Sbjct: 241 YEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVEHCPDEDDTIPRQQFSFRP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILDVIGIVTS+NPSIPVLRKNGMETQRRV+NLKDASGRS+ELTLWGDFC
Sbjct: 301 ISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           NKEGQ LQE+I SGLSPVLAVKSGKVSDFTGKSIGTISSTQLF+NPDLSEA ILR+WYDG
Sbjct: 361 NKEGQNLQEMINSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFVNPDLSEALILRDWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTSLSISKEIM GSAKNEIRK+VSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSLSISKEIMSGSAKNEIRKSVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQ FEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQVFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 588
           TGEEILGVSAKELYMLKYE+QDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 TGEEILGVSAKELYMLKYEQQDDVKFGEIIRGKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. ExPASy TrEMBL
Match: A0A6J1DMC5 (Replication protein A subunit OS=Momordica charantia OX=3673 GN=LOC111021895 PE=3 SV=1)

HSP 1 Score: 1068.1 bits (2761), Expect = 1.5e-308
Identity = 536/603 (88.89%), Postives = 565/603 (93.70%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
           MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG  QERYSL ISDAVSAE AMLATQLND
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGKTQERYSLFISDAVSAEHAMLATQLND 60

Query: 61  IVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
           IVK GR+KKGSVIQLIDYVCSP++ RKIIVV+CLETIILDCEIIGNPKSSAQS+  AQKA
Sbjct: 61  IVKAGRIKKGSVIQLIDYVCSPVQGRKIIVVICLETIILDCEIIGNPKSSAQSDFSAQKA 120

Query: 121 TRSGNLEQPAN-GNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180
           T S NLEQ A  GNGH+  +NPV +VQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP
Sbjct: 121 TPSRNLEQSAKVGNGHVSDKNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIP 180

Query: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240
           IAALNPYQGRWAIKARVTAKGDLRRYNNA+GDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
Sbjct: 181 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 240

Query: 241 YEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRP 300
           YEVIEVGKVY+ISKGSLKPA+K+FNHLKNEWEVFLEASS+VE+CPDEDDTIPRQQFSFRP
Sbjct: 241 YEVIEVGKVYLISKGSLKPAQKNFNHLKNEWEVFLEASSSVELCPDEDDTIPRQQFSFRP 300

Query: 301 ISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFC 360
           IS+IENAETNSILD+IGIVTS+NPSIPVLRKNGMETQRRV+NLKDASGRS+ELTLWGDFC
Sbjct: 301 ISEIENAETNSILDIIGIVTSINPSIPVLRKNGMETQRRVLNLKDASGRSVELTLWGDFC 360

Query: 361 NKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDG 420
           N+EGQKLQEII SGLSP+LAVKSGKVSDFTGKSIGTISSTQLFI+PDL E+ ILR+WYDG
Sbjct: 361 NREGQKLQEIINSGLSPILAVKSGKVSDFTGKSIGTISSTQLFIDPDLCESRILRDWYDG 420

Query: 421 GGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCY 480
           GGKNTTS+SISKEIMPG+AKNEIRKTVSQIKDEGLGR+DKPDWITVKATISFIKTDSFCY
Sbjct: 421 GGKNTTSVSISKEIMPGAAKNEIRKTVSQIKDEGLGRSDKPDWITVKATISFIKTDSFCY 480

Query: 481 TACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540
           TACPLMIGDRQCNKKV RSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE
Sbjct: 481 TACPLMIGDRQCNKKVNRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQE 540

Query: 541 TGEEILGVSAKELYMLKYEEQDDVK----------------LKIKEESYGDEQRVKNTVV 587
           +GEEILGV AKELY+LKYEEQDDVK                LKIKEE YGDEQRVKNTVV
Sbjct: 541 SGEEILGVPAKELYVLKYEEQDDVKFGAIIRSKIFDQFLFRLKIKEEMYGDEQRVKNTVV 600

[Close]

BLAST of Clc11G01720 vs. TAIR 10
Match: AT2G06510.1 (replication protein A 1A )

HSP 1 Score: 860.9 bits (2223), Expect = 6.8e-250
Identity = 427/625 (68.32%), Postives = 513/625 (82.08%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG----NAQERYSLLISDAVSAEQAMLAT 60
           MPV LTPNAI+AI  GDVN KPL+QVL+IK+IG     +QERY  LISD VSA+ AM+A 
Sbjct: 1   MPVSLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 61  QLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENF 120
           QLND VK+G+ +KGS++QLIDY+CS +K RK+IVVL +ETI+   E IGNP    +++  
Sbjct: 61  QLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTE 120

Query: 121 AQKA-TRSGNLEQP----------------ANGNGHLGARNPVQDVQSFQATVQPPYQPP 180
           AQK  + +GN+  P                A   G +  +N   +  SF+ +VQP YQPP
Sbjct: 121 AQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRG-VNIQNQANNTPSFRPSVQPSYQPP 180

Query: 181 PNYKNHGAIIKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL 240
            +Y+NHG I+KNEAPAR+IPIAALNPYQGRWAIKARVTAKGD+RRYNNAKGDGKVFSFDL
Sbjct: 181 ASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDL 240

Query: 241 LDSDGGEIRVTCFNAVVDRFYEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASST 300
           LD DGGEIRVTCFNA+VDRFY+V EVGKVY+ISKGSLKPA+K+FNHLKNEWE+FLE++ST
Sbjct: 241 LDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTST 300

Query: 301 VEVCPDEDDTIPRQQFSFRPISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRV 360
           VE+CPDED +IP+QQFSFRPISDIENAE N+ILDVIG+VTSVNPS+P+LRKNGMET RR+
Sbjct: 301 VELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRI 360

Query: 361 VNLKDASGRSIELTLWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISST 420
           +NLKD SG+++E+TLWG+FCN++G++L+E++ S   PVLA+K+GKVSDF+GKS+GTISST
Sbjct: 361 LNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISST 420

Query: 421 QLFINPDLSEAHILRNWYDGGGKNTTSLSISKEIMPGS-AKNEIRKTVSQIKDEGLGRAD 480
           QLFINPD  EAH LR W+D GGK+T S SIS++ MPG  ++NEIRK VSQIK+EGLGR+D
Sbjct: 421 QLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSD 480

Query: 481 KPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYR 540
           KPDWITVKATISFIKTDSFCYTACPLMIGD+QCNKKVTRSG ++WLCDRCNQE ++CDYR
Sbjct: 481 KPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYR 540

Query: 541 YLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQDD---------------- 588
           YLLQ QIQDHTGLTW+TAFQETGEEI+G  AK+LY +KYE + +                
Sbjct: 541 YLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYM 600

[Close]

BLAST of Clc11G01720 vs. TAIR 10
Match: AT2G06510.2 (replication protein A 1A )

HSP 1 Score: 826.2 bits (2133), Expect = 1.9e-239
Identity = 408/600 (68.00%), Postives = 492/600 (82.00%), Query Frame = 0


Query: 26  VLDIKLIG----NAQERYSLLISDAVSAEQAMLATQLNDIVKTGRVKKGSVIQLIDYVCS 85
           VL+IK+IG     +QERY  LISD VSA+ AM+A QLND VK+G+ +KGS++QLIDY+CS
Sbjct: 3   VLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYICS 62

Query: 86  PIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA-TRSGNLEQP----------- 145
            +K RK+IVVL +ETI+   E IGNP    +++  AQK  + +GN+  P           
Sbjct: 63  DVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFNEPMVQ 122

Query: 146 -----ANGNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARIIPIAALN 205
                A   G +  +N   +  SF+ +VQP YQPP +Y+NHG I+KNEAPAR+IPIAALN
Sbjct: 123 HSVNRAPPRG-VNIQNQANNTPSFRPSVQPSYQPPASYRNHGPIMKNEAPARVIPIAALN 182

Query: 206 PYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIE 265
           PYQGRWAIKARVTAKGD+RRYNNAKGDGKVFSFDLLD DGGEIRVTCFNA+VDRFY+V E
Sbjct: 183 PYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTE 242

Query: 266 VGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRPISDIE 325
           VGKVY+ISKGSLKPA+K+FNHLKNEWE+FLE++STVE+CPDED +IP+QQFSFRPISDIE
Sbjct: 243 VGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIE 302

Query: 326 NAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFCNKEGQ 385
           NAE N+ILDVIG+VTSVNPS+P+LRKNGMET RR++NLKD SG+++E+TLWG+FCN++G+
Sbjct: 303 NAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGR 362

Query: 386 KLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDGGGKNT 445
           +L+E++ S   PVLA+K+GKVSDF+GKS+GTISSTQLFINPD  EAH LR W+D GGK+T
Sbjct: 363 QLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDT 422

Query: 446 TSLSISKEIMPGS-AKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACP 505
            S SIS++ MPG  ++NEIRK VSQIK+EGLGR+DKPDWITVKATISFIKTDSFCYTACP
Sbjct: 423 ASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACP 482

Query: 506 LMIGDRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEE 565
           LMIGD+QCNKKVTRSG ++WLCDRCNQE ++CDYRYLLQ QIQDHTGLTW+TAFQETGEE
Sbjct: 483 LMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEE 542

Query: 566 ILGVSAKELYMLKYEEQDD----------------VKLKIKEESYGDEQRVKNTVVKADK 588
           I+G  AK+LY +KYE + +                +KLKIKEESYGDEQRVK TVVK DK
Sbjct: 543 IMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDK 601

[Close]

BLAST of Clc11G01720 vs. TAIR 10
Match: AT4G19130.1 (Replication factor-A protein 1-related )

HSP 1 Score: 605.9 bits (1561), Expect = 3.9e-173
Identity = 320/677 (47.27%), Postives = 444/677 (65.58%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGNAQ----ERYSLLISDAVSAEQA 60
           M V LT  AI  I+ G+V ++    P++QV D+K I   Q    ER+ +++SD     Q 
Sbjct: 1   MEVSLTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQG 60

Query: 61  MLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQ 120
           ML T LN++VK G ++ GS+++L  +V   IK R+I++V  LE +    +IIG+P    +
Sbjct: 61  MLGTDLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGK 120

Query: 121 SENFAQKATRSG----------------NLEQPANGN-------GHLGARNPVQDVQSFQ 180
             +  Q+   SG                N  +P   N       G  G+  P     S +
Sbjct: 121 HND--QRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNAAISPQVGGTGSSVPASTTPSTR 180

Query: 181 ATVQP----------------------PYQPPPNYKNHGAIIKNEAPARIIPIAALNPYQ 240
           A   P                      P  PPP Y N G + +NEAP +IIP+ AL+PY 
Sbjct: 181 AYSNPSSGNGVTRQDYARDPPTSYPHQPQPPPPMYANRGPVARNEAPPKIIPVNALSPYS 240

Query: 241 GRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGK 300
           GRW IKARVT K  L++Y+N +G+GKVF+FDLLD+DGGEIRVTCFNAV D+FY+ I VG 
Sbjct: 241 GRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQIVVGN 300

Query: 301 VYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFRPISDIENAE 360
           +Y+IS+GSL+PA+K+FNHL+N++E+ L+ +ST++ C +ED  IPR QF FR I DIE+ E
Sbjct: 301 LYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESME 360

Query: 361 TNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDFCNKEGQKLQ 420
            N I+DVIGIV+S++P++ + RKNG  T +R + LKD SGRS+E+T+WGDFCN EGQ+LQ
Sbjct: 361 NNCIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQ 420

Query: 421 EIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYDGGGKNTTSL 480
            +  SG+ PVLAVK+G++S+F GK++ TI S+QLFI+PD  EA  L+NW++  GK+   +
Sbjct: 421 SLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCI 480

Query: 481 SISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIG 540
           S+S+E   GS K ++RKT+SQIKDE LG ++KPDWITV ATI ++K D+FCYTACP+M G
Sbjct: 481 SLSRE-FSGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFCYTACPIMNG 540

Query: 541 DRQCNKKVTRSGNSKWLCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGV 600
           DR C+KKVT +G+  W C++C++  ++CDYRY+LQ QIQDHT LT VTAFQE GEEI+G+
Sbjct: 541 DRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGI 600

Query: 601 SAKELYMLKYEEQDD----------------VKLKIKEESYGDEQRVKNTVVKADKCVLF 609
           SAK+LY +K E +D+                 KLK+KEE++ DEQRVK TVVK DK + +
Sbjct: 601 SAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDK-LNY 660

[Close]

BLAST of Clc11G01720 vs. TAIR 10
Match: AT5G45400.1 (Replication factor-A protein 1-related )

HSP 1 Score: 594.7 bits (1532), Expect = 9.1e-170
Identity = 327/725 (45.10%), Postives = 436/725 (60.14%), Query Frame = 0


Query: 1   MPVHLTPNAISAIVAGDVNSK----PLVQVLDIKLIGN-------AQERYSLLISDAVSA 60
           M V LT   +  ++ G+V S+    P++QV ++KLI +       +  RY  L+SD    
Sbjct: 1   MAVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDL 60

Query: 61  EQAMLATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKS 120
              ML T LN +V  G ++ GSVI+L  Y+C+ I+ R+I+V++ LE I+  C IIGNPK 
Sbjct: 61  AAGMLNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKE 120

Query: 121 SAQSE---------------NFAQKATR----------SGNLEQP--------------- 180
              S                +  Q+A R          S N  QP               
Sbjct: 121 PGHSSINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVS 180

Query: 181 AN-------------GNGHLGARNPVQDV------------------------------- 240
           AN             G   + A +P + V                               
Sbjct: 181 ANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPS 240

Query: 241 -------------------------QSFQATVQPPYQP--PPNYKNHGAIIKNEAPARII 300
                                     ++   VQ  YQP  PP Y N G + +NEAP RI 
Sbjct: 241 TRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRIN 300

Query: 301 PIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 360
           PIAALNPYQGRW IK RVT+K DLRR+NN +G+GK+FSFDLLD+DGGEIRVTCFN  VD+
Sbjct: 301 PIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQ 360

Query: 361 FYEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVCPDEDDTIPRQQFSFR 420
           F++ I VG VY+IS+G+LKPA+K+FNHL N++E+ L+++ST++ C D D TIPR  F FR
Sbjct: 361 FFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCED-DGTIPRYHFHFR 420

Query: 421 PISDIENAETNSILDVIGIVTSVNPSIPVLRKNGMETQRRVVNLKDASGRSIELTLWGDF 480
            I DIEN E NS  DVIGIV+S++P++ ++RKN  E Q+R + LKD SGRS+E+T+WG+F
Sbjct: 421 NIGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNF 480

Query: 481 CNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLSEAHILRNWYD 540
           CN EGQKLQ +  SG+ PVLA+K+G++ +F GK + TI ++Q FI PD  EA  LR WY+
Sbjct: 481 CNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYE 540

Query: 541 GGGKNTTSLSISKEIMPGSAKNEIRKTVSQIKDEGLGRADKPDWITVKATISFIKTDSFC 588
             G+N    SIS+E   G  + E+RK ++QIKDE LG ++KPDWITV ATISF+K ++FC
Sbjct: 541 REGRNAHFTSISRE-FSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFC 600

[Close]

BLAST of Clc11G01720 vs. TAIR 10
Match: AT5G61000.1 (Replication factor-A protein 1-related )

HSP 1 Score: 312.8 bits (800), Expect = 6.9e-85
Identity = 204/600 (34.00%), Postives = 329/600 (54.83%), Query Frame = 0


Query: 1   MPVHLTPNAISAIV------AGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAML 60
           M   +TP+AIS ++      +    S+ +VQV+D+K IGN   RY+   +D  +  +AM 
Sbjct: 1   MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGN---RYTFSANDGKTKVKAMF 60

Query: 61  ATQLNDIVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSE 120
              L   + +G+++   +I+LID+  + I ++     L     +  CE +G   S   SE
Sbjct: 61  TASLTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFL-----VTKCEAVG---SVLDSE 120

Query: 121 NFAQKATRSGNLEQPANGNGHLGARNPVQDVQSFQATVQPPYQPPPNYKNHGAIIK---- 180
                 +      +P          +P+ DV S   T++P  +     K+   I+     
Sbjct: 121 INLDSKSGEEEAREPKKQKLEHSPVSPLNDVVSTGITLKPKQEFVA--KSASQIMSEQRG 180

Query: 181 NEAPA-------RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSD 240
           N APA       R+ P+ +LNPYQG W IK RVT KG +R Y NA+G+G VF+ +L D +
Sbjct: 181 NAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEE 240

Query: 241 GGEIRVTCFNAVVDRFYEVIEVGKVYMISKGSLKPARKDFNHLKNEWEVFLEASSTVEVC 300
           G +I+ T FN    +F++  ++GKVY IS+GSLK A K F  ++N++E+ L  +S VE  
Sbjct: 241 GTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEA 300

Query: 301 PDEDDTIPRQQFSFRPISDIE-NAETNSILDVIGIVTSVNPSIPVLRKNGME-TQRRVVN 360
             E+  IP  +F+F PI ++        ++D+IG+V SV+P++ + R+   E   +R + 
Sbjct: 301 SSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDIT 360

Query: 361 LKDASGRSIELTLWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQL 420
           L D S +++ ++LW D     GQ+L ++  +  SPV+A+KS KV DF G S+ TIS + +
Sbjct: 361 LADESRKTVVVSLWNDLATGIGQELLDM--ADQSPVIAIKSLKVGDFQGVSLSTISRSNV 420

Query: 421 FINPDLSEAHILRNWYDGGGKNTTSLSISKEIMPGSAKNEIRK------TVSQIKDEGLG 480
            INP+  EA  L++W+D  GK  +  SI   + P SAKN  R        +S I      
Sbjct: 421 VINPESPEAKKLKSWFDSEGKEISMSSIGSGMSP-SAKNGSRSLYTDRVLLSHITSNPSL 480

Query: 481 RADKPDWITVKATISFIKTD-SFCYTACPLMIGDRQCNKKVTRSGNSKWLCDRCNQEFED 540
             +KP + + +A ISFIK D +  Y AC      + CNKKVT + +S + C+ C +++E+
Sbjct: 481 FEEKPVFFSTRAYISFIKPDQTMWYQAC------KTCNKKVTEALDSGYWCEGCQRKYEE 540

Query: 541 CDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQD--DVKLKIKEESY 573
           C  RY++  ++ D +G TW+++F +  E+ILG SA EL  LK EE +  + + K+KE ++
Sbjct: 541 CSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATW 578

The following BLAST results are available for this feature:

BLAST of Clc11G01720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648589.2	0.0e+00	89.01	replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus]	[more]
KGN60516.1	0.0e+00	93.54	hypothetical protein Csa_019336 [Cucumis sativus]	[more]
XP_008459663.1	0.0e+00	93.05	PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo]	[more]
XP_038890007.1	0.0e+00	92.38	replication protein A 70 kDa DNA-binding subunit A [Benincasa hispida] >XP_03889...	[more]
KAG6599522.1	0.0e+00	91.39	Replication protein A 70 kDa DNA-binding subunit A, partial [Cucurbita argyrospe...	[more]

BLAST of Clc11G01720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKI4	9.6e-249	68.32	Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=37...	[more]
Q6YZ49	2.8e-216	58.10	Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japoni...	[more]
F4JSG3	5.6e-172	47.27	Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=37...	[more]
Q9FHJ6	1.3e-168	45.10	Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=37...	[more]
Q65XV7	1.4e-146	40.63	Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japoni...	[more]

BLAST of Clc11G01720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKL9	0.0e+00	93.54	Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_2G000250 PE=3 SV...	[more]
A0A1S3CAT4	0.0e+00	93.05	Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103498706 PE=3 SV=1	[more]
A0A6J1G4P2	0.0e+00	91.23	Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111450710 PE=3...	[more]
A0A6J1KGE2	0.0e+00	91.23	Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111493656 PE=3 S...	[more]
A0A6J1DMC5	1.5e-308	88.89	Replication protein A subunit OS=Momordica charantia OX=3673 GN=LOC111021895 PE=...	[more]

BLAST of Clc11G01720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06510.1	6.8e-250	68.32	replication protein A 1A	[more]
AT2G06510.2	1.9e-239	68.00	replication protein A 1A	[more]
AT4G19130.1	3.9e-173	47.27	Replication factor-A protein 1-related	[more]
AT5G45400.1	9.1e-170	45.10	Replication factor-A protein 1-related	[more]
AT5G61000.1	6.9e-85	34.00	Replication factor-A protein 1-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007199	Replication factor-A protein 1, N-terminal	PFAM	PF04057	Rep-A_N	coord: 5..97 e-value: 1.1E-27 score: 96.0
IPR007199	Replication factor-A protein 1, N-terminal	CDD	cd04477	RPA1N	coord: 9..98 e-value: 4.43532E-29 score: 109.209
None	No IPR available	GENE3D	2.40.50.140		coord: 176..286 e-value: 6.9E-35 score: 121.5
None	No IPR available	GENE3D	2.40.50.140		coord: 430..596 e-value: 2.2E-45 score: 156.3
None	No IPR available	GENE3D	2.40.50.140		coord: 289..429 e-value: 2.0E-37 score: 130.0
None	No IPR available	GENE3D	2.40.50.140		coord: 3..111 e-value: 1.6E-27 score: 97.7
None	No IPR available	PANTHER	PTHR23273	REPLICATION FACTOR A 1, RFA1	coord: 2..594
None	No IPR available	PANTHER	PTHR23273:SF47	REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A	coord: 2..594
None	No IPR available	CDD	cd04475	RPA1_DBD_B	coord: 311..418 e-value: 6.29082E-33 score: 119.997
None	No IPR available	CDD	cd04474	RPA1_DBD_A	coord: 179..281 e-value: 1.9338E-49 score: 165.883
IPR004591	Replication factor A protein 1	TIGRFAM	TIGR00617	TIGR00617	coord: 4..587 e-value: 1.1E-174 score: 580.3
IPR013955	Replication factor A, C-terminal	PFAM	PF08646	Rep_fac-A_C	coord: 462..587 e-value: 1.8E-37 score: 128.3
IPR013955	Replication factor A, C-terminal	CDD	cd04476	RPA1_DBD_C	coord: 446..587 e-value: 5.22697E-54 score: 180.582
IPR031657	Replication protein A, OB domain	PFAM	PF16900	REPA_OB_2	coord: 300..404 e-value: 4.8E-29 score: 100.2
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 191..262 e-value: 6.6E-9 score: 35.6
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 294..424
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 176..290
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 443..586
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G01720.2	Clc11G01720.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006268	DNA unwinding involved in DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0007140	male meiotic nuclear division
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0009555	pollen development
biological_process	GO:0007004	telomere maintenance via telomerase
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005662	DNA replication factor A complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0043047	single-stranded telomeric DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding