Clc11G00800 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTAAATTATTTCCTTTATCATCCTTTATATGTTTTTAAATCATTTTTGGACTCTATAAATAGGTAGAAATTTTAAGGAAGAAACACAACAAAGGCTTTGCATCTCGGTCTTTATTGGGAGTAAGAGGTATGCGTCTTGGTGTGATTTAAACACATTTTTCTTTTCTTTCTTTCAATAAAATAGGTGCTCTATTTCTATTTTTTATGCATTTGATAACATATGTATCTCAATTCTTCAAATTATTATGTAAATTGTGACAATAAAAAGTTATGTTGTTTTTCATTTTTGTTATAAATTATTATTATTTTTTTAAAGTGTTAATAAAGTTTCTACTACTATTTTTATTTCCTTATTAGTAAGTATGGATAATAAATGAATAAAAATAAGAAAAAATAGCTGGTAAATAGAATTTATTCTTACAAATAATAAAAGAATTTGGAAGAAGAGCATCACAAAGGTATGTCTTTGATTGTTATAAGCGAGTGTATGATTTATTTATAATTTTTCCATTTCAGATAATATAAAAATGGCATACAATGTGTTTGGCAACCCGATCACAAACGAAACTCTAGCAGCCATGCCTGAGTATGAAGGAAAAAAATAACACGTCGAGATAGAGCACACGTGGCACTTAATATGAAGAATGCTCAAGATAAAGACAAAAATGCTCGAGAATATGTGGAAAGATTGAAACAACAATGGGGAACTGGAGTTTCTACCCTTTGCTTAATTTATAATGCCACTGGTGATACCATAAAATTTGTTGTTGAGCACAGTTGGCATGGTCATATTGGGCCTGGCCCTTACCCAATTGAGATTGCAAATGGTCAATGGGGTGGTTTTCTTCATGTCAAAACTTCAGGAACGGCCACTGGCTCTTCTGCTGCGTGTGTGTACCGTGGGTTAAATAATGATGGTGTGGTTTGTGATTGGATGGTAGCTTGGTCTAATCCATGGAATCGATCAGCTTCAGACAATACGGTTGGCAACTTTTTGCTTAAACTCTGCTTATAAAATTTTTAGCCACAATTCTTTTATGATTAAATTACATTTTCATGTGCATGTTAGCAAACATATATATAATTTTGATTCACAGACTTTTAAAATATCATATTTTATTCTAAATTTGTAAGAGTTGAAATTAAGACAGCCAGGTAATATAAAATCTTTTGAAAAAGGAAACAATTTCATTAACTTTCTTGTTATATATATATATATAAAAGGACTCCTTTGACAAAATAAAAAAATATTACAACAAATCTCATAGTTAAGAGATGCCTTAGTGCATTATTTTCCCTTACCAATTGATTCCTTATGAATTTAAAAGTATATCTAATAAAAAGAATTATAAACTTATCATTATTTAAATTTATAGTTTTATATACGTTTTGATGTGATGTGACTTTGAATAATAAAACTTTTGCACATCATACTTTGAATAATTTTTACAACTTGTTTTTTTACCCTAATTAATAATTTTTATATAATTTTATGCTTTTGATTGAAAACATTACTTCCAAAGTCATTTTCTGCCACCATTTATGGTCACGGTAAACATAATTACGTTTTCTTTTCTTGTAACTTTAGTATTTATTTGCATTTTTGTAGGCATATACCGAGATTCGCGAAGGAGGACATTATACTAAAAATGATCATTGGAATTACATCTCTAACTTATTATATGATTCGGGACTCAGCAGCTCAGACAAATGGAACAAATGCGTTTCAAATGTGACAACGGGAAGTGATACTAGTCCAATATTTGAGGGAATACTCACCCTTCAAGATGCTTGAAACTGTCTTCTAAAAATAAATGCTCTGAAATAAATGTTTGATAATTATGTACTACTAAACTTTAATCACTACTAAATAATGGCCTTTGAAGCTTTTATCTCTAGAATTTGTGGGGTTGAATTATGTCCTATTCTCTTTAGTTACTTATGCTTGTATGGAAAATATTTAAAGTTCACCACAAAACCAAAGCAAATTATTTTGCAAATGTATGATTCATGATGTGAAAATGAATATTTTCAAAGAGTAAGCTGAATGAAAACAATACTTTTGCAAAATAAATAAATGAATGAAAAAAAATGTTGAATTTTGTGATTTCTTTGTTTTGGAACACCATGTTCAGTAAAGATTAAGGATGTATTTGAAACACATTTTTAAGTGTTTAATTTAAAGAACAAGTCATTTTAG TTTTTAAATTATTTCCTTTATCATCCTTTATATGTTTTTAAATCATTTTTGGACTCTATAAATAGGTAGAAATTTTAAGGAAGAAACACAACAAAGGCTTTGCATCTCGGTCTTTATTGGGAGTAAGAGATAATATAAAAATGGCATACAATGTGTTTGGCAACCCGATCACAAACGAAACTCTAGCAGCCATGCCTGAGTATGAAGGAAAAAAATAACACGTCGAGATAGAGCACACGTGGCACTTAATATGAAGAATGCTCAAGATAAAGACAAAAATGCTCGAGAATATGTGGAAAGATTGAAACAACAATGGGGAACTGGAGTTTCTACCCTTTGCTTAATTTATAATGCCACTGGTGATACCATAAAATTTGTTGTTGAGCACAGTTGGCATGGTCATATTGGGCCTGGCCCTTACCCAATTGAGATTGCAAATGGTCAATGGGGTGGTTTTCTTCATGTCAAAACTTCAGGAACGGCCACTGGCTCTTCTGCTGCGTGTGTGTACCGTGGGTTAAATAATGATGGTGTGGTTTGTGATTGGATGGTAGCTTGGTCTAATCCATGGAATCGATCAGCTTCAGACAATACGGCATATACCGAGATTCGCGAAGGAGGACATTATACTAAAAATGATCATTGGAATTACATCTCTAACTTATTATATGATTCGGGACTCAGCAGCTCAGACAAATGGAACAAATGCGTTTCAAATGTGACAACGGGAAGTGATACTAGTCCAATATTTGAGGGAATACTCACCCTTCAAGATGCTTGAAACTGTCTTCTAAAAATAAATGCTCTGAAATAAATGTTTGATAATTATGTACTACTAAACTTTAATCACTACTAAATAATGGCCTTTGAAGCTTTTATCTCTAGAATTTGTGGGGTTGAATTATGTCCTATTCTCTTTAGTTACTTATGCTTGTATGGAAAATATTTAAAGTTCACCACAAAACCAAAGCAAATTATTTTGCAAATGTATGATTCATGATGTGAAAATGAATATTTTCAAAGAGTAAGCTGAATGAAAACAATACTTTTGCAAAATAAATAAATGAATGAAAAAAAATGTTGAATTTTGTGATTTCTTTGTTTTGGAACACCATGTTCAGTAAAGATTAAGGATGTATTTGAAACACATTTTTAAGTGTTTAATTTAAAGAACAAGTCATTTTAG ATGAAGAATGCTCAAGATAAAGACAAAAATGCTCGAGAATATGTGGAAAGATTGAAACAACAATGGGGAACTGGAGTTTCTACCCTTTGCTTAATTTATAATGCCACTGGTGATACCATAAAATTTGTTGTTGAGCACAGTTGGCATGGTCATATTGGGCCTGGCCCTTACCCAATTGAGATTGCAAATGGTCAATGGGGTGGTTTTCTTCATGTCAAAACTTCAGGAACGGCCACTGGCTCTTCTGCTGCGTGTGTGTACCGTGGGTTAAATAATGATGGTGTGGTTTGTGATTGGATGGTAGCTTGGTCTAATCCATGGAATCGATCAGCTTCAGACAATACGGCATATACCGAGATTCGCGAAGGAGGACATTATACTAAAAATGATCATTGGAATTACATCTCTAACTTATTATATGATTCGGGACTCAGCAGCTCAGACAAATGGAACAAATGCGTTTCAAATGTGACAACGGGAAGTGATACTAGTCCAATATTTGAGGGAATACTCACCCTTCAAGATGCTTGA MKNAQDKDKNAREYVERLKQQWGTGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSAACVYRGLNNDGVVCDWMVAWSNPWNRSASDNTAYTEIREGGHYTKNDHWNYISNLLYDSGLSSSDKWNKCVSNVTTGSDTSPIFEGILTLQDA Homology
BLAST of Clc11G00800 vs. NCBI nr
Match: AIS71930.1 (23 kDa jasmonate-induced protein [Citrullus lanatus]) HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99 Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Clc11G00800 vs. NCBI nr
Match: XP_038891763.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida]) HSP 1 Score: 348.6 bits (893), Expect = 3.2e-92 Identity = 160/173 (92.49%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of Clc11G00800 vs. NCBI nr
Match: XP_022157068.1 (23 kDa jasmonate-induced protein-like [Momordica charantia] >XP_022157069.1 23 kDa jasmonate-induced protein-like [Momordica charantia]) HSP 1 Score: 280.0 bits (715), Expect = 1.4e-71 Identity = 124/174 (71.26%), Postives = 145/174 (83.33%), Query Frame = 0
BLAST of Clc11G00800 vs. NCBI nr
Match: XP_008443732.1 (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo]) HSP 1 Score: 275.8 bits (704), Expect = 2.6e-70 Identity = 125/175 (71.43%), Postives = 148/175 (84.57%), Query Frame = 0
BLAST of Clc11G00800 vs. NCBI nr
Match: XP_038878528.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida]) HSP 1 Score: 267.3 bits (682), Expect = 9.3e-68 Identity = 123/174 (70.69%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Clc11G00800 vs. ExPASy Swiss-Prot
Match: P32024 (23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.8e-34 Identity = 76/172 (44.19%), Postives = 103/172 (59.88%), Query Frame = 0
BLAST of Clc11G00800 vs. ExPASy Swiss-Prot
Match: P42764 (Jasmonate-induced protein homolog OS=Atriplex canescens OX=35922 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 4.0e-05 Identity = 34/112 (30.36%), Postives = 48/112 (42.86%), Query Frame = 0
BLAST of Clc11G00800 vs. ExPASy TrEMBL
Match: A0A097BU21 (23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 5.8e-100 Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Clc11G00800 vs. ExPASy TrEMBL
Match: A0A6J1DVF8 (23 kDa jasmonate-induced protein-like OS=Momordica charantia OX=3673 GN=LOC111023879 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 6.7e-72 Identity = 124/174 (71.26%), Postives = 145/174 (83.33%), Query Frame = 0
BLAST of Clc11G00800 vs. ExPASy TrEMBL
Match: A0A1S3B9I3 (23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.3e-70 Identity = 125/175 (71.43%), Postives = 148/175 (84.57%), Query Frame = 0
BLAST of Clc11G00800 vs. ExPASy TrEMBL
Match: A0A6J1DTL1 (23 kDa jasmonate-induced protein-like OS=Momordica charantia OX=3673 GN=LOC111023882 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67 Identity = 120/173 (69.36%), Postives = 139/173 (80.35%), Query Frame = 0
BLAST of Clc11G00800 vs. ExPASy TrEMBL
Match: A0A0A0M0F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.7e-65 Identity = 119/174 (68.39%), Postives = 145/174 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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