Clc11G00280 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G00280
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr11: 354724 .. 355146 (-)
RNA-Seq ExpressionClc11G00280
SyntenyClc11G00280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAAGAAAGAGGAAGGAGAAATCCAAGGAAAATGGGAGGAAGGAGGAAAAAAATTTTGTCAACAATCAAGGCAATAGGGCGACGGTGGTTGTCGACAGTCACGGGCGACGGACAACGATGGTTGTCGACGGTCACAAACAACCACCGATGAGAGGTAGGAGATGAAGAAAAACGAGATGAAAATGAAGTTTATTTTTTCAAACCATGAATTTGCTTTACTAATTTCAAAAAATTTACTATAAGAGCTCATATGTAGGCCCGCCCCTAATTCCAAACCCATGGGTCAAACGCGGATGGGTCTTTAGGGCATGGTCAAGGGCTAAAACCGAAAACTCCACAGCAGATAGCGGTTTCAATATGAGGTCTTTGAAACAGCCGTCGTTTCAGATAGCGGTCTCACCGCTTCAACTCTTCTAA

mRNA sequence

ATGAAGAAAAGAAAGAGGAAGGAGAAATCCAAGGAAAATGGGAGGAAGGAGGAAAAAAATTTTGTCAACAATCAAGGCAATAGGGCGACGGTGGTTGTCGACAGTCACGGGCGACGGACAACGATGGTTGTCGACGGTCACAAACAACCACCGATGAGAGGCCCGCCCCTAATTCCAAACCCATGGGTCAAACGCGGATGGGTCTTTAGGGCATGGTCAAGGGCTAAAACCGAAAACTCCACAGCAGATAGCGGTTTCAATATGAGGTCTTTGAAACAGCCGTCGTTTCAGATAGCGGTCTCACCGCTTCAACTCTTCTAA

Coding sequence (CDS)

ATGAAGAAAAGAAAGAGGAAGGAGAAATCCAAGGAAAATGGGAGGAAGGAGGAAAAAAATTTTGTCAACAATCAAGGCAATAGGGCGACGGTGGTTGTCGACAGTCACGGGCGACGGACAACGATGGTTGTCGACGGTCACAAACAACCACCGATGAGAGGCCCGCCCCTAATTCCAAACCCATGGGTCAAACGCGGATGGGTCTTTAGGGCATGGTCAAGGGCTAAAACCGAAAACTCCACAGCAGATAGCGGTTTCAATATGAGGTCTTTGAAACAGCCGTCGTTTCAGATAGCGGTCTCACCGCTTCAACTCTTCTAA

Protein sequence

MKKRKRKEKSKENGRKEEKNFVNNQGNRATVVVDSHGRRTTMVVDGHKQPPMRGPPLIPNPWVKRGWVFRAWSRAKTENSTADSGFNMRSLKQPSFQIAVSPLQLF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G00280.1Clc11G00280.1mRNA