Clc10G22260 (gene) Watermelon (cordophanus) v2

Overview
NameClc10G22260
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L35
LocationClcChr10: 35255163 .. 35259747 (+)
RNA-Seq ExpressionClc10G22260
SyntenyClc10G22260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTAGGTCATCGGCGGTCATTCAAAATCACTGTCAATGCCAAGATCTGTAACCTTTATATCAAGCTCAAGGCCACTCTGAAGCCCCCTTCCGGGAAATTCCAACGCCTCCTAAAGCTTGATAAAATACTCATCGGAGTGGATTCCAAATCCGAATCACGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTGAAGAAGAAGTATTTGGGGCGTCGCCGATCTGAAATGCCCCAATATTCATACCTACTTGTTGAATCTGAAAATCAATCTTGGCATGTTGGCCGACTGGTACGGAATCAATCTTGGCATGAGAAGTTTGAGTTTCCATTCAATTTATAGATTTGTTGATTGTTGATTGTTGATTGTTGATTGATGTGCAGGAACTAAGGTGTGTGGCTGCTTTTGTTGTTGGATTGGGTTGTCTGCTTGTCCTTGCACTCAACACACACATTGGCCTTGTTATTGCTAATGCCAATGACATCCGTCCCACCTTCACTTCCTTTATTATTTGGGTTTGCCTGCTTTTACTTGTTTTATGGCTCCACAAATGTAAGTACCTTTCGGCAATGCTATTGCTAGTCGCTCTGCTTCCTCTCCTACTCTTCCAATTCCATACATTTGTACATCTTTTACATTTACGCCACTTTTTATAACAACATTTGTACATCTTTTACATCTACGCTACTTTTTATAACACTTCTTCTAAGATATATAAAGATAATGGGAAATAAGAATAAAAAAACAAACTAGAGCAAAATGTTTTGTGATAAATAATTTTCCTCCCATCACAAATGAATTTGTTCTTTTCTCTCCATTGAATTGATTTGAAGTTTTTATTCGTTTCGATGTTAATGAATATTAGATCTTATTCCTGAAACTGAAACAAAGGAAATCGGAGGAAAAGGCCTACTTGAGCAGCAAATAATAATAATAATAATAAAGATAAATAAAGAGAGAAAAGTTAATGTGTCAACGAAATTAAAAGAAAAAAAAAAAAAAAAAGAGAAAGGAGAAAAAGATAAGCAAGAAAGAGGAGGTACTAACTAAAACCATGGGAAAAATTTTTATTCAAGTTAAAAATCACTTTTGCTCTCTAAATTTTGATAAAAGTAACAATTTAGTTCTTGATATGTCTATTTTGAATCAATTTCAATGGATCCCTTGTTGCTACCCAAAGGAGAAGTAATATGTAGGAATGATAGGATTGGAATTGGTGACATTTTGAACCCAAACTTTATTAAATTTTAACATTAATTTCTACAATATGGACTAAATGTTGCAAACTTTAAAGTATAAAGACTAAATTATTACAAAAGTAGCTACCAAGGTCCGCCACATCTTTCAATTGGTCTACAGTGTCATTGATTTTATTTAGTCTCTGTAATTTCAGTTTTGTAATAGTTTAGTCCTTATACTTTAAAGTTTGAAACGATTTAGTTCATATTGTAGAAATTAATGTTAAAATTTAATAAAATTTCTTGCATAAATAAACCGATAAATTAATTAAAAATTCAATATTTTTACAAAATAAATAGTCTATATCATAAAATAATAAAATTGACATCAAATTTTGATGATTTTTTTTATGTTATGGACTAAATTGTTACAAATTTGAAAGTAAGAGACTAAATTGTTACATAGTAAAGTTTGGGGACTAAATTGTGTTAGGAAATTGAAGTACAAGAATTAAATCGGGACTAAATTATTATTTTCATGAAAATATAAAAATCAAACAGTATTTTTAACCTAAATTCAAATTAAATTGTATCTCAATATAAATGTTTGGTTATACATTCAGATACCGAAGAAAAAAATAAACCAAAATTCATTTCCAGATATAGTGTATGTAGCATTCTGAAACTAAAATCATGTTTAATCTTTATAACTTAGAGTTCTGAAGCTTACGTATACGTCCATGCATGTCAAGGGAAAATCACGTCTTTGAGTTTCGAGTTGACTAACTGAATTTATGAAATTTTATCAAAAGGGAATGATCAGTACTTTGCAACTTTAAGCTTCTCAAGGGGTAAACCAGATGAGTTAGAAGATTGCGCCTTATAAATAGCCCCATACTAAGAGTCTCAAGGGACAAACAATTTATTTTGTGCTTACCTAAGCTAAGTGCTTCGTGAACTATTTTACTCTTCATTTTGAGTTTTGTCTCAATTAAGTTTCAAGAATTTCAAGATTTACACTTTTTACGTTTATTTTTCATTTATTACTCATTTTCATCACTAGTTTAATGTCTATTAATTAATTTATAATAATTAAATAATTTTTACTTTTTTGTCACTATTAAAATTAATTAATAATTTCAAATTATAATTATTTTAAGTTCTCAAAATGCGCATAGTGACATAGTATTTGTACTACTAATTTAAAAATTAGAAATTCGATTTCCCGACCTGTGTATTATTAAAAATAAAATCAACTAAAATTAACGTCTAATATGAAATCAAAAAATAGTAAAAACATGAGAGTAAAAAGTGTACAATATCGAAACTTAGAAATTAAATGAAAACCAAATTTAAAAGTAAAAATGGAACATTTTGAAACTTGGGGACAAAATAAAAACTAAACTCAAAAGTAAAAGATCAAAAGTAAAACATAAAAGTATGGAAGGTAAAACCGTAACATTTTAAAGTGGGTAAATTGCAAAATCCATCTCTGAAGTATGGTGGTATGTTGCAATTATACTTTCGATTGTAAAAATTAAGCCCCTAAACTTTTAAAAGTGTTAAAATTGGACTCTAAAGCTTAAATAATTATAGAAATTAGCCCCGCAGATGATAAAAATTGAACACTCAAACTTATACAAATGTTATAATTTATATAATTATATAAGTTTAAAAGGTCAAATTTTGTCAAAAATTTAACACTAATATAATTTTAAAGATTCAATTTTTTAAATTAAAAATTTAAGAATATAATTGCAACTATTTAGAGTAAGTATTTTGCAATTTCCCATTGTAAAGTTTAGACTTAAAATAAAATGGTATTTAAAAAGAAATATTGTACATTATGAGGAAAAGAGATTAATGGAAATAGAGAAAGAAGAGGGAAGAGAAGGGGAAGGTGATCGGACATGGGAGGTGTGGCGGGGGGTGGGACCCACTTGGCATTCCCAATTCCCCTCGCGTGCCCATCATGGCAAACCGGCGCGTGGTACTCCCCACCCTCCTCCTACTCCTTTTATTATTATTATTATTATTCAACCACGTCAGTGGGTCCCTCCAACGTGGCCGTTCATACCTTCTCTCCACACGCTCTCATCCAGCGGCCCAGATTTATAGTCAAACCCCTATCTTCATTGGTCTCTTCGAAAACTCTTTTCTTTTTCCTTAAATAATTCTCATTACTATTATTGTTATTATTATAAGTTTCAAATATCAACGATTTCCCAACTTTGACTGTGGGTGTCACCTCAATCGAGGCGTACTTGGTTGAAATGGCAGAATTTCTATACCTAATTACCTAATTGCCCTCCTCCTTTCTTCCACAACATCTTGTTTCATTTTGGCAAGTACTTGTGTTTCTTTTAATAAAATCGTACCGCCTTCCCTTCTTCTTTTCTTCTCTTCTTCTCCTTGATGGAGGGTAATAATGTAAAACAAGTTTATTTTTATGGAAAACTTAATGTAATTAATGTGAACAAAATTAAAATTAAATCTGGGGTTCGGTAGCTTTGACCACTGCTCACTGGGCTCCATCTCTCTATCTCTGTTTCATAATACTATTGGATTCCTATCGTCTTTTTCTGGGTTTTCCTTTCCATCTCAAAGATCTATCTATTTCTGTTCTTCCCTTCCTAATTTGACTTCTTTCACCCTTTTTTTCCGTCCTCTTCCTCACTGCCAACTCCCAATTGCATCACTCAATCATTTCCAGGTTTGTTTTTCTTCCTATCCTTCTTCCTCTACAAAAATTTCCACTGCAAATTGATTCCACCTTCGGCTATTTGTATATGGTGCCTTTGAATTGATGCTTTGTGCTATGTTAGGGTTCTAATTCTCGCTATTTCCTTGTATCTTAATTTTCTCTGCTAGGTAGCTGCTCCTAGTTTTTAATTAGGGATCAATTTCGTATCTTCAAACTTTTTATGCCAGCTTACCCCAATATATATGTTTTCCCACGTCATTTACTTTCTGCCACAAGCGGGATGGGGAAGCCTGTTAACTGGGGTTTTTTTTTTTCGTTTTCTGAGAGTGCCAGATGCTTTGTACTTTAACATTAAGAGGGAGTTGGATGACTATGTTTTCTGATGGATTGCAGTTTGTCAAAGAATTTCATATGTTCATTGCATCCACTTCCTTGATCATTTCATTGTAATAGATTCTTAGACCATTTCAAGTGTGGATATTTCCATAGAAGAGAAGCTCGATGTGCATGTTTTGTTATGTTCGTTCATCGTTGGAGTGCTGCTGTATCGAAATGCTCACACACGTTTAGCCAATTTGAGATTATTGGCGGTATTAATTCCCCACTGCTAGATTAGTCTTCTAATGATGTCACCTACTTCAGGTTCTTACAAGTGCATTTGGCTTTTCCTTCTGCAGATTAA

mRNA sequence

ATGGCGTTAGGTCATCGGCGGTCATTCAAAATCACTGTCAATGCCAAGATCTGTAACCTTTATATCAAGCTCAAGGCCACTCTGAAGCCCCCTTCCGGGAAATTCCAACGCCTCCTAAAGCTTGATAAAATACTCATCGGAGTGGATTCCAAATCCGAATCACGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTGAAGAAGAAGTATTTGGGGCGTCGCCGATCTGAAATGCCCCAATATTCATACCTACTTGTTGAATCTGAAAATCAATCTTGGCATGTTGGCCGACTGGAACTAAGGTGTGTGGCTGCTTTTGTTGTTGGATTGGGTTGTCTGCTTGTCCTTGCACTCAACACACACATTGGCCTTGTTATTGCTAATGCCAATGACATCCGTCCCACCTTCACTTCCTTTATTATTTGGGTTTGCCTGCTTTTACTTGTTTTATGGCTCCACAAATACCATTTCAAGTGTGGATATTTCCATAGAAGAGAAGCTCGATGTGCATGTTTTGTTATGTTCGTTCATCGTTGGAGTGCTGCTGTATCGAAATGCTCACACACGTTTAGCCAATTTGAGATTATTGGCGATTAA

Coding sequence (CDS)

ATGGCGTTAGGTCATCGGCGGTCATTCAAAATCACTGTCAATGCCAAGATCTGTAACCTTTATATCAAGCTCAAGGCCACTCTGAAGCCCCCTTCCGGGAAATTCCAACGCCTCCTAAAGCTTGATAAAATACTCATCGGAGTGGATTCCAAATCCGAATCACGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTGAAGAAGAAGTATTTGGGGCGTCGCCGATCTGAAATGCCCCAATATTCATACCTACTTGTTGAATCTGAAAATCAATCTTGGCATGTTGGCCGACTGGAACTAAGGTGTGTGGCTGCTTTTGTTGTTGGATTGGGTTGTCTGCTTGTCCTTGCACTCAACACACACATTGGCCTTGTTATTGCTAATGCCAATGACATCCGTCCCACCTTCACTTCCTTTATTATTTGGGTTTGCCTGCTTTTACTTGTTTTATGGCTCCACAAATACCATTTCAAGTGTGGATATTTCCATAGAAGAGAAGCTCGATGTGCATGTTTTGTTATGTTCGTTCATCGTTGGAGTGCTGCTGTATCGAAATGCTCACACACGTTTAGCCAATTTGAGATTATTGGCGATTAA

Protein sequence

MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQRRRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLLVLALNTHIGLVIANANDIRPTFTSFIIWVCLLLLVLWLHKYHFKCGYFHRREARCACFVMFVHRWSAAVSKCSHTFSQFEIIGD
Homology
[Close]
BLAST of Clc10G22260 vs. NCBI nr
Match: XP_038906422.1 (uncharacterized protein LOC120092221 [Benincasa hispida])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 125/171 (73.10%), Postives = 133/171 (77.78%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MALG RRSFKITV+AKICNLYIKLKATLKPPSGK QRLLKLDK+LIG DSKSES ILVQR
Sbjct: 42  MALGFRRSFKITVHAKICNLYIKLKATLKPPSGKLQRLLKLDKLLIGADSKSESWILVQR 101

Query: 61  RRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLL 120
           RRTLKSRMLSFV KK+LG  RS+MP       ESENQSW VGR+ELRCVA F VGLG L 
Sbjct: 102 RRTLKSRMLSFV-KKHLGCGRSKMPH-----AESENQSWDVGRMELRCVAFFGVGLGYL- 161

Query: 121 VLALNTHIGLVIANANDIRPTFTSFIIWV--CLLLLVLWLHKYHFKCGYFH 170
            LALNTHIGL     N I P+F+S  IWV  CLLL VLWLH    KC Y +
Sbjct: 162 -LALNTHIGL----TNAIHPSFSS-TIWVCLCLLLFVLWLH----KCKYLY 195

[Close]
BLAST of Clc10G22260 vs. NCBI nr
Match: KAE8650972.1 (hypothetical protein Csa_002588 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-43
Identity = 113/160 (70.62%), Postives = 125/160 (78.12%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MA+GHRRSFKI+V AKICNLYIKLKATLK PSGKFQRLLKLDK+LI VDSKS SRIL+QR
Sbjct: 3   MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQR 62

Query: 61  RRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLL 120
           RRTLKSRMLSFV KK+LG RRS+ P       ES  +SWHVG LE RCVAAF VGLG  +
Sbjct: 63  RRTLKSRMLSFV-KKHLGHRRSKFPH-----AESRYRSWHVGLLERRCVAAFGVGLG-YV 122

Query: 121 VLALNTHIGLVIANANDIRPTFTSFIIWVCLLLLVLWLHK 161
           V+AL T I L    AN I P+F+S IIWV L + VLWL K
Sbjct: 123 VVALKTQIEL----ANAIGPSFSS-IIWVYLCVFVLWLQK 150

[Close]
BLAST of Clc10G22260 vs. NCBI nr
Match: XP_008442323.1 (PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-37
Identity = 102/160 (63.75%), Postives = 120/160 (75.00%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MA+GHRRSFKI+V+AKICNLYIKLKATLK PSGKFQRLLKLDK+LI VDSKSESR+LVQR
Sbjct: 1   MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQR 60

Query: 61  RRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLL 120
           RRTLKSRMLSFV KK+LGR RS++P       ES+ QSWHVG           +G+G   
Sbjct: 61  RRTLKSRMLSFV-KKHLGRCRSKIPH-----SESKYQSWHVGH---------QIGVGFGY 120

Query: 121 VLALNTHIGLVIANANDIRPTFTSFIIWVCLLLLVLWLHK 161
           ++AL T IGL    AN +  +F+S IIWV L + V+WL K
Sbjct: 121 LVALKTQIGL----ANAVGSSFSS-IIWVYLCVFVIWLQK 140

[Close]
BLAST of Clc10G22260 vs. NCBI nr
Match: KAA0044224.1 (RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-32
Identity = 89/133 (66.92%), Postives = 102/133 (76.69%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MA+GHRRSFKI+V+AKICNLYIKLKATLK PSGKFQRLLKLDK+LI VDSKSESR+LVQR
Sbjct: 170 MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQR 229

Query: 61  RRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLL 120
           RRTLKSRMLSFV KK+LGR RS++P       ES+ Q WHVG           +G+G   
Sbjct: 230 RRTLKSRMLSFV-KKHLGRCRSKIPH-----SESKYQYWHVGH---------QIGVGFGY 287

Query: 121 VLALNTHIGLVIA 134
           ++AL T IGL  A
Sbjct: 290 LVALKTQIGLANA 287

[Close]
BLAST of Clc10G22260 vs. NCBI nr
Match: XP_023540743.1 (uncharacterized protein LOC111801019 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.3 bits (373), Expect = 7.3e-32
Identity = 92/172 (53.49%), Postives = 118/172 (68.60%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MALGHRRS+KITV+AK+ +LYIK KAT+K PSGKF+ LL LDK+L+G+DSKSESRILVQ+
Sbjct: 1   MALGHRRSWKITVHAKVNDLYIKFKATVKRPSGKFRSLLNLDKLLVGLDSKSESRILVQQ 60

Query: 61  RRTLKSRMLSFVKKKYLGRRRS-----EMPQYSYLLVESENQSWHVGRLELRCVAAFVVG 120
            RTLKSR++SFVKK +  RR       +MP   YL+ E+E QSW +GR E  C A F VG
Sbjct: 61  HRTLKSRIISFVKKHFRRRRSKTGVGFKMPD-PYLVDETEYQSWRLGRAESSCAAVFGVG 120

Query: 121 LGCLL----VLALNTHIGLVIANANDIRPTFTSFIIWVCLLLLVLWLHKYHF 164
           LG LL      A    +G++        P+ +SF++ VC++L VL  HK  F
Sbjct: 121 LGYLLAEFGASAAVKRVGII--------PSLSSFLL-VCVVLFVLLFHKSKF 162

[Close]
BLAST of Clc10G22260 vs. ExPASy TrEMBL
Match: A0A0A0LCL9 (50S ribosomal protein L35 OS=Cucumis sativus OX=3659 GN=Csa_3G728110 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 9.3e-41
Identity = 108/151 (71.52%), Postives = 119/151 (78.81%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MA+GHRRSFKI+V AKICNLYIKLKATLK PSGKFQRLLKLDK+LI VDSKS SRIL+QR
Sbjct: 1   MAIGHRRSFKISVQAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSVSRILLQR 60

Query: 61  RRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLL 120
           RRTLKSRMLSFV KK+LG RRS+ P       ES  +SWHVG LE RCVAAF VGLG  +
Sbjct: 61  RRTLKSRMLSFV-KKHLGHRRSKFPH-----AESRYRSWHVGLLERRCVAAFGVGLG-YV 120

Query: 121 VLALNTHIGLVIANANDIRPTFTSFIIWVCL 152
           V+AL T I L    AN I P+F+S IIWV L
Sbjct: 121 VVALKTQIEL----ANAIGPSFSS-IIWVYL 139

[Close]
BLAST of Clc10G22260 vs. ExPASy TrEMBL
Match: A0A1S3B4Y8 (uncharacterized protein LOC103486229 OS=Cucumis melo OX=3656 GN=LOC103486229 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 5.6e-38
Identity = 102/160 (63.75%), Postives = 120/160 (75.00%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MA+GHRRSFKI+V+AKICNLYIKLKATLK PSGKFQRLLKLDK+LI VDSKSESR+LVQR
Sbjct: 1   MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQR 60

Query: 61  RRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLL 120
           RRTLKSRMLSFV KK+LGR RS++P       ES+ QSWHVG           +G+G   
Sbjct: 61  RRTLKSRMLSFV-KKHLGRCRSKIPH-----SESKYQSWHVGH---------QIGVGFGY 120

Query: 121 VLALNTHIGLVIANANDIRPTFTSFIIWVCLLLLVLWLHK 161
           ++AL T IGL    AN +  +F+S IIWV L + V+WL K
Sbjct: 121 LVALKTQIGL----ANAVGSSFSS-IIWVYLCVFVIWLQK 140

[Close]
BLAST of Clc10G22260 vs. ExPASy TrEMBL
Match: A0A5A7TM08 (RING-H2 finger protein ATL74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005850 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-32
Identity = 89/133 (66.92%), Postives = 102/133 (76.69%), Query Frame = 0 

Query: 1   MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQR 60
           MA+GHRRSFKI+V+AKICNLYIKLKATLK PSGKFQRLLKLDK+LI VDSKSESR+LVQR
Sbjct: 170 MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQR 229

Query: 61  RRTLKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLL 120
           RRTLKSRMLSFV KK+LGR RS++P       ES+ Q WHVG           +G+G   
Sbjct: 230 RRTLKSRMLSFV-KKHLGRCRSKIPH-----SESKYQYWHVGH---------QIGVGFGY 287

Query: 121 VLALNTHIGLVIA 134
           ++AL T IGL  A
Sbjct: 290 LVALKTQIGLANA 287

[Close]
BLAST of Clc10G22260 vs. ExPASy TrEMBL
Match: A0A5D3DNQ2 (50S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00230 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 7.9e-32
Identity = 88/130 (67.69%), Postives = 100/130 (76.92%), Query Frame = 0 

Query: 4   GHRRSFKITVNAKICNLYIKLKATLKPPSGKFQRLLKLDKILIGVDSKSESRILVQRRRT 63
           GHRRSFKI+V+AKICNLYIKLKATLK PSGKFQRLLKLDK+LI VDSKSESR+LVQRRRT
Sbjct: 7   GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRT 66

Query: 64  LKSRMLSFVKKKYLGRRRSEMPQYSYLLVESENQSWHVGRLELRCVAAFVVGLGCLLVLA 123
           LKSRMLSFV KK+LGR RS++P       ES+ QSWHVG           +G+G   ++A
Sbjct: 67  LKSRMLSFV-KKHLGRCRSKIPH-----SESKYQSWHVGH---------QIGVGFGYLVA 121

Query: 124 LNTHIGLVIA 134
           L T IGL  A
Sbjct: 127 LKTQIGLANA 121

The following BLAST results are available for this feature:
BLAST of Clc10G22260 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906422.11.1e-4873.10uncharacterized protein LOC120092221 [Benincasa hispida][more]
KAE8650972.11.8e-4370.63hypothetical protein Csa_002588 [Cucumis sativus][more]
XP_008442323.11.2e-3763.75PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo][more]
KAA0044224.15.6e-3266.92RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa][more]
XP_023540743.17.3e-3253.49uncharacterized protein LOC111801019 [Cucurbita pepo subsp. pepo][more]
BLAST of Clc10G22260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc10G22260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCL99.3e-4171.5250S ribosomal protein L35 OS=Cucumis sativus OX=3659 GN=Csa_3G728110 PE=4 SV=1[more]
A0A1S3B4Y85.6e-3863.75uncharacterized protein LOC103486229 OS=Cucumis melo OX=3656 GN=LOC103486229 PE=... [more]
A0A5A7TM082.7e-3266.92RING-H2 finger protein ATL74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DNQ27.9e-3267.6950S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
BLAST of Clc10G22260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc10G22260.2Clc10G22260.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane