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Clc10G20290 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCCCTCCCCCCCCTCTCTCTATTTCTCTCTCTCTTCCCCTGTTTTTGTTTTGATTTCTTCTCTGAATTCCCATGGATCTTCAATGGCTTCTCGATTTCCTTCAAGGAATGACCAACCCTTTTCTCGCCACCGCCATTGTCGCTCTCGCCGTTCTCCTCTCTTACTTCCAGAAGCTCGGCCTTGAAGGTGAAATGATCTATGCCATTTTCAGAGCCTTTCTTCAGCTCTCTATTATTGGCTTTGTTCTTCAGTTCATCTTCAACCAGCAAAACCTTGCTTGGATCCTTCTCGCCTATCTTTTCATGGTAACTCTTTTCTGCCTTCCAACTGTTTGATGTTTTGACCCTGAGAATTTTTCAGTCTCCTTTTATTTCAACATTTAATCTGTCAATTTCTGTTAGATTTTAGATTAGTTTTTTTAAAAAAATTATACTCCAAATCAACTCGCTGAGTTTTACTTGGATCGACCACAATTCAGTACAATAGGAGTTTATGAAAGAATTTTAAGTTAAAAAACACTCTTGATTTGTGAATTCTGGTAGTTGCTTAAATTTCTTTATTTCATTGGTAAATTAAATGTTATGAGATATTCTCACTTCGAACCTCCTAAAACATTTCCTCTCTTGATTCATATGGATTTTTTTATAAATTTTTTTTAGCCAAATTTATCAATTAGTTAACTTGTTTTCATTTGATTGACAATTTAACATAGTATCAAAGATGTTTGGCCTACCAAAATAAAGTCGGTGTTAAAAAAATTGATGTAATATCTATTATTAAAATTTGTCTAAGGACATTTTTATATAACGCGTAAATTTCAACTTCAACAAATTTACTCTAGACTTTATAACTCAACATAATTCACAGTCTAATTGAAGATCTAGCTATGAGTTAGGATGCGTGTTAAAGTGTTTTATAATATTAAATTTGTTAGAATGGATCCATCACTTTTGAGTTGTTTGATAAGAGCAATGATTAAACTTTTAAGCCGTAGGAAATGTTTTTAAACCTAAAATTAATGAAAATATTTTTAAACTGTAGGAAAATCATTAGATGCACACAGTTGTAATTTATCCATTTTTCCTTTTCTTTTCTCTCAACATTGGAGAATGTATAAGTCGGTTCTCTTATATCTTCCTGATTTGTTTTTCATTTCTTCAAACAGAGCAAAATGGATGACTCTTACAAAGTTTTTTTTTTTTTTTTAAAAAAAAATATATATATATATATTTAAATGATGATATGACTTTCCAATATTTTGGAACAGGTCATATTAGTTATTTTATTTTAATTTAATTACAAGGTCATATAAGTTATTTCGGGTGATTATGTGGTTTGTGGGTGTCACGCTCGCGAGCATTTTTTGTGGAAACAAAGAGATAATGTTATTGGAATTAAAATTTGAAGAAATTTCTATAATTTTTGGAATAAATTCTGTAAACTTTTCTGGATGCTATTGATTTCATTCTTGGAGTTTTTTTTTTTTTTTTCTTTTTCTTTTTTAGTTTTTATAAATAATAAAAGAATTTGATTTTTGTAAACAGTTTTTCTGGATGTTGGAGAAAAGAGTAAAAAGATAAGGTTTAATTATTATTTGGGACGTTTTCAAATATAAAAAAATGAATCACAATATTTATAAATATATCAAAATTTAACTGTCTATATGACACAGATAATAGTTTATCACGGTGTATCGCAAATAGACGGTTATATTTTGCTATTATTCGTAAATATTTTTTATTTGGTAGTTTCATTTTAGTTTATACTTGGGAAGTTGTGAGGTTGTGGGACCCACGAATTCTTTGGACAAAACAAGAAGTAGAATTGTTTTTTTTTACAATATGTGCAATTGGGGATCAAACCTCTGACTTCAATATTAAAAGTACAACCACTATGTCAATGAGCTATGCTCATTTTGGCACAAGGAGTGAAGTTCACAACTCAACTCCTCGGCCAAACACCTCTTAAATTTCTTAAAATGTAGTCAATAAATTTGTATTAAAGAGTTTCTATTGCATATAATATTGAAGCTAAATTATACAAAATATTTCTAAATTTTGTATTTTGCATTTTACATAAAGAATGTTCATAAACTTTCAAAATTTTCAAAAATGACCTTAAACTTTAAAAAAGAGTTTAAAAATACCCTTATCGTTAGTTTCAGATAGAAACTATTAATATTTTGTGTCAAAAATACCTCAAAAATTTTATTAGCTTAAAAAATACTCTTAATTTAACACAAAAAAAAAATAAAAAAAATAAAAGTACACTTACTGCTAGCATGTGAATAGAAACAACTAAAACTTTCTTGCTTCTCTATTTTTCCTTTTTTTTTCTCTATTCTTCGAAATCCTCTTACTTCTTTTTTTTTTTTTTTTTTTTTTGTTAACTCTTTGAAATTTGTTTACCTCAAATAAATAAGTAAAAATCTCCACTTTAGTTAAGATATTTAGACTATAATAAGAAGAAAAAAAAGATAATTGAAGCACTAATAAATCTTAGGACGTAAATGTTTTAACAAACTTGTGTGTTAGTAGTTGAATGTGTGTTAATAGCCAATTATTATTATTATTATATTTTTTTTATATTTGACTATTTATCATTTTTGTATGTCTTAAAGACAAATTTTGATTTTGAGATTTTGTGAGATTTTTTTTTTTTAATTTAAAGTTTTTGTTTTTATTTTGGTTACTAAGAAAATTGGTGTAAAAATTTCACAAATAGCAGAAAAATGAGAATATCAATATGAAAAAAAAAATCTATATAATTTGTTTTTAAATTGAATTTTTCAAACTCAATAAAACTTTAAACAAATTGATTGCCACGCTAACGATATGTGCATTTTAATTTATTTATTTATTTTAAAGTTAGAGTTATTTTAGCAATGAAATATCAATAGTTGTCTATATACTAATAATAAGTGTATTTTTCAAAAAAAAAACTTTTTTGAAATTTAAAGGTATTTCTTGAAACAAAATACTTTATCATTTCTATAAAAACTAAACGAAGAAAAATGACATTTTTTAACTCTTCGAAAAAGTTTAAGGACGTTTTAAAAACTTTTCAAAAGTTGAAAAATATTTCACAATTTTTTTTATAATTTAATCTAATATTTATGTTAAAAAATTTAAAATAGGGACTAAAATGTGCGCCTCTTTAAGTGTGAGAACAAAACAACCGTTTTGATAATACATGGGTTAATTTGATAAAAATAAAAAAATAAATACAAGATTGTGATTACCAAAATAGTACCTAAACAAATAATAATGTTATTATTAGTATTATTGTCGTGAGTGAACGTTATTATTTGTTTGTATTATGTAAGATGTAATATGTTTAACTACTTTCGCCTGTATATATATATAATTTGTTGATTTTAGTAGTTCATATTTTATTAATTGGTGTTATTTCGAACAAAAAAAAAAAAAAAAGGATGTGCTAAGAAAATGTGTGATTGTGAAACGGGGACTGAGCGTCACCATGTGCAAATGGATTATAAATATCAAACTCTACGGTCAAATTTTGGGCAATTTAAAATTTTGATTGTAAAAGTTAACTTTTATATATATAATTCTTTTATGAGGCAAGTTACAAATTTAATCATTATTAATTTGTGTTTAGTTTATAAGCTAATATTATCTGAAGTTTAATAATTTTGTATTAGAATCTTACAATTAGATCTAATCTCATATAAATTATATTGACATTATTTTAATTAGAGTTGTTTTCAAATATATAAAAATGAACCAAAATACTTGACTACTATCTGTATTTATCTATATCATGATAGATATCATGATCTATCACAAATAGATGATAACATTTTAATATTATTTATAAATACTTTTAGCAGTTTGGTTATTTAAAATAATTATTTATTTATTTCCATATTTACATAGTTGTGTTTTGTTTTTAATTAAGTTGTTTAGCGAATTATATATTAAGGTCTGTGCAATATAAAATATAGAGAAAATGAGTAGATGTTTTGTGGTCTTTATTTTTTCTATATCCTGTTTTTATTATTGTCCCATGTGGTGCAGATTAGTTGGTAAAGTATTTTTGGTTTGAAATTTAGGTCCTCACAATTTGGACATATGTTCAGTTTGGTTATTTTCGTTTAAAAAGTTTCAATTTAATCTTTTATTATTTTTTTTATTTACTTTTTTATCTTAATTTCAATTTGGTACATAGAGTTTTATTAAATTTCTAAAAATCTTATTTATCTTTTACCCAACTTAAAAAAATCCACGTATTTCTTTCTTTGTTTTTCTTTTTCTTTTTACTCAACCCTAAACTTTAATACATTCAACTAATACAATAAACCAAATAGAAATCATCACCCCCCCCCCCCCCCCCCCCACCAAAAAAAATAAAAAATAAAAAATTAATATTGAAACAAAAATTCAAACCAAAGGATTAAATTGGAAATTTTGGAAATTTAGAAATTGTAGAGATTAAATTTAGACATACATATACAAAAGTTAAAATTTATTCGAAATGAATTAATTTTTAGTTCAACAATATGGGGAGATGGGGAATCAAACAGTGTCCTTTTAGTCAAAGATATATACTATATAATAGTTGAGTTATGTGTATAGTAACTAAAATGATATAAAATGGAATTGTGATGTTTGCTATTGCAGGTGACAGTTGCAGGGTATACAGCAGGGCAGCGTGCGAAGCACGTGCCTCGAGGAAAGTTGGTGGCCGGAGCTTCAATTTTGACCGGAACTTCAGTGACTATGGTGATGCTAGTGGTGTTGAGAGTCTTCCCTCTCACTCCTAGGTACATAATCCCCGTCGTCGGAATGATGGTCGGAAACTCCATGACAGTCACCGGAGTCACCATGAAAAGACTTAGAGATGATATCAGAACTCAATTTAGTCTTGTAATTTCTCTATCCCTATTAGTTATCTCACTTTAATCAACTTTTCAATTTTTCATTTTGCGTATGATAGGACTATAAATTTTTTATTTTTGTGTAATGATTAATTAACTAAAAAAGTATTCTAAAATTTGAGGAAGTAGCGAAGACTTTATACGTTTTAAAAAATGATTTTTGAAGTCAATTTGTTAAAACCAAAATAAAAATAAAGAACAAAATAATTTGAATCAAAGTTCTTTAACAAATATAGATCTTTTATAAACTTAAAAATTCAAAGACTAAAATAGAAATTTAAAAGTTTTTGAAGTACTATAATAGAATAAACTTAAACGTTGGGAATCTAAATAGGATTTAAATCAAAAGTTTTCTAATACGTTTCTAAGTTATCGATTGTGTTTAGTAAATATTTATTTCGTTAACTTTATGGTTATTAATGTATTAGACACAACATTCTAAACTTCACCGTGGAATCAAACACTAATCATAATCTTCTATTCATATTCTTTAACACATCTAATTCAGGTAGAAACCGCATTAGCTCTTGGAGCAACACCGCGACAGGCAACACACCAGCAAGTGAAGAGGGCACTGGTGGTAGCATTGTCGCCGGTGGTAGACAACGCTAAGACGGTCGGACTGATATCGTTGCCTGGGGCGATGACTGGACTGATAATGGGCGGAGCATCTCCGATCGAAGCCATTCAGCTACAAATTGTGGTGATGAACTTTCTGATCGGAGCTTCCACTGTCAGCAGCATTATGTCCACTTACCTCTGCTGGCCTTCCTTCTTCACCGCCGCCTACCAGTTGGAAACCGCCGTCTTCGCTGCCGCCTGATTTCCTTTCCCTTTCCCTTTCCCATTTCAGTTTTTAACCGTCCAAGACGGAGAAGAGAATATCATCGATCCTTTGTGATTCCATTATTTCTTTTCAAATGTGTAGTTTTCTTTTTGGAGTTTAAATGTAAATTCAATTAGGCTATTTTGGTTTTTGTTCATAAACTTTAATTTTATATTTTATGAGGGGGAATAAAGTTTTGTTTTCGTTTGGCATTTTTTTTATTTTCTTTCTATTGTTTTAGATAAAGAATTAGATCGTTAAGCAATGAAA CCCCCCTCCCCCCCCTCTCTCTATTTCTCTCTCTCTTCCCCTGTTTTTGTTTTGATTTCTTCTCTGAATTCCCATGGATCTTCAATGGCTTCTCGATTTCCTTCAAGGAATGACCAACCCTTTTCTCGCCACCGCCATTGTCGCTCTCGCCGTTCTCCTCTCTTACTTCCAGAAGCTCGGCCTTGAAGGTGAAATGATCTATGCCATTTTCAGAGCCTTTCTTCAGCTCTCTATTATTGGCTTTGTTCTTCAGTTCATCTTCAACCAGCAAAACCTTGCTTGGATCCTTCTCGCCTATCTTTTCATGGTGACAGTTGCAGGGTATACAGCAGGGCAGCGTGCGAAGCACGTGCCTCGAGGAAAGTTGGTGGCCGGAGCTTCAATTTTGACCGGAACTTCAGTGACTATGGTGATGCTAGTGGTGTTGAGAGTCTTCCCTCTCACTCCTAGGTACATAATCCCCGTCGTCGGAATGATGGTCGGAAACTCCATGACAGTCACCGGAGTCACCATGAAAAGACTTAGAGATGATATCAGAACTCAATTTAGTCTTGTAGAAACCGCATTAGCTCTTGGAGCAACACCGCGACAGGCAACACACCAGCAAGTGAAGAGGGCACTGGTGGTAGCATTGTCGCCGGTGGTAGACAACGCTAAGACGGTCGGACTGATATCGTTGCCTGGGGCGATGACTGGACTGATAATGGGCGGAGCATCTCCGATCGAAGCCATTCAGCTACAAATTGTGGTGATGAACTTTCTGATCGGAGCTTCCACTGTCAGCAGCATTATGTCCACTTACCTCTGCTGGCCTTCCTTCTTCACCGCCGCCTACCAGTTGGAAACCGCCGTCTTCGCTGCCGCCTGATTTCCTTTCCCTTTCCCTTTCCCATTTCAGTTTTTAACCGTCCAAGACGGAGAAGAGAATATCATCGATCCTTTGTGATTCCATTATTTCTTTTCAAATGTGTAGTTTTCTTTTTGGAGTTTAAATGTAAATTCAATTAGGCTATTTTGGTTTTTGTTCATAAACTTTAATTTTATATTTTATGAGGGGGAATAAAGTTTTGTTTTCGTTTGGCATTTTTTTTATTTTCTTTCTATTGTTTTAGATAAAGAATTAGATCGTTAAGCAATGAAA ATGGATCTTCAATGGCTTCTCGATTTCCTTCAAGGAATGACCAACCCTTTTCTCGCCACCGCCATTGTCGCTCTCGCCGTTCTCCTCTCTTACTTCCAGAAGCTCGGCCTTGAAGGTGAAATGATCTATGCCATTTTCAGAGCCTTTCTTCAGCTCTCTATTATTGGCTTTGTTCTTCAGTTCATCTTCAACCAGCAAAACCTTGCTTGGATCCTTCTCGCCTATCTTTTCATGGTGACAGTTGCAGGGTATACAGCAGGGCAGCGTGCGAAGCACGTGCCTCGAGGAAAGTTGGTGGCCGGAGCTTCAATTTTGACCGGAACTTCAGTGACTATGGTGATGCTAGTGGTGTTGAGAGTCTTCCCTCTCACTCCTAGGTACATAATCCCCGTCGTCGGAATGATGGTCGGAAACTCCATGACAGTCACCGGAGTCACCATGAAAAGACTTAGAGATGATATCAGAACTCAATTTAGTCTTGTAGAAACCGCATTAGCTCTTGGAGCAACACCGCGACAGGCAACACACCAGCAAGTGAAGAGGGCACTGGTGGTAGCATTGTCGCCGGTGGTAGACAACGCTAAGACGGTCGGACTGATATCGTTGCCTGGGGCGATGACTGGACTGATAATGGGCGGAGCATCTCCGATCGAAGCCATTCAGCTACAAATTGTGGTGATGAACTTTCTGATCGGAGCTTCCACTGTCAGCAGCATTATGTCCACTTACCTCTGCTGGCCTTCCTTCTTCACCGCCGCCTACCAGTTGGAAACCGCCGTCTTCGCTGCCGCCTGA MDLQWLLDFLQGMTNPFLATAIVALAVLLSYFQKLGLEGEMIYAIFRAFLQLSIIGFVLQFIFNQQNLAWILLAYLFMVTVAGYTAGQRAKHVPRGKLVAGASILTGTSVTMVMLVVLRVFPLTPRYIIPVVGMMVGNSMTVTGVTMKRLRDDIRTQFSLVETALALGATPRQATHQQVKRALVVALSPVVDNAKTVGLISLPGAMTGLIMGGASPIEAIQLQIVVMNFLIGASTVSSIMSTYLCWPSFFTAAYQLETAVFAAA Homology
BLAST of Clc10G20290 vs. NCBI nr
Match: XP_038903048.1 (protein ALUMINUM SENSITIVE 3 [Benincasa hispida]) HSP 1 Score: 474.9 bits (1221), Expect = 4.4e-130 Identity = 258/264 (97.73%), Postives = 261/264 (98.86%), Query Frame = 0
BLAST of Clc10G20290 vs. NCBI nr
Match: XP_008442603.1 (PREDICTED: protein ALUMINUM SENSITIVE 3 [Cucumis melo] >KAA0044056.1 protein ALUMINUM SENSITIVE 3 [Cucumis melo var. makuwa] >TYK25079.1 protein ALUMINUM SENSITIVE 3 [Cucumis melo var. makuwa]) HSP 1 Score: 472.6 bits (1215), Expect = 2.2e-129 Identity = 258/264 (97.73%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of Clc10G20290 vs. NCBI nr
Match: XP_004137785.1 (protein ALUMINUM SENSITIVE 3 [Cucumis sativus] >KGN58910.1 hypothetical protein Csa_001224 [Cucumis sativus]) HSP 1 Score: 471.1 bits (1211), Expect = 6.3e-129 Identity = 256/264 (96.97%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of Clc10G20290 vs. NCBI nr
Match: XP_023539963.1 (protein ALUMINUM SENSITIVE 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127 Identity = 252/264 (95.45%), Postives = 258/264 (97.73%), Query Frame = 0
BLAST of Clc10G20290 vs. NCBI nr
Match: KAG6596436.1 (Protein ALUMINUM SENSITIVE 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027977.1 Protein ALUMINUM SENSITIVE 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 464.9 bits (1195), Expect = 4.5e-127 Identity = 251/264 (95.08%), Postives = 258/264 (97.73%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy Swiss-Prot
Match: Q9ZUT3 (Protein ALUMINUM SENSITIVE 3 OS=Arabidopsis thaliana OX=3702 GN=ALS3 PE=1 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 3.3e-104 Identity = 197/262 (75.19%), Postives = 232/262 (88.55%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy Swiss-Prot
Match: Q5W7C1 (UPF0014 membrane protein STAR2 OS=Oryza sativa subsp. japonica OX=39947 GN=STAR2 PE=1 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.1e-103 Identity = 200/256 (78.12%), Postives = 229/256 (89.45%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy Swiss-Prot
Match: P77307 (Probable iron export permease protein FetB OS=Escherichia coli (strain K12) OX=83333 GN=fetB PE=1 SV=2) HSP 1 Score: 151.8 bits (382), Expect = 1.1e-35 Identity = 87/246 (35.37%), Postives = 158/246 (64.23%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy Swiss-Prot
Match: O34684 (UPF0014 membrane protein YjkA OS=Bacillus subtilis (strain 168) OX=224308 GN=yjkA PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.9e-31 Identity = 83/240 (34.58%), Postives = 144/240 (60.00%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy Swiss-Prot
Match: Q58348 (UPF0014 membrane protein MJ0938 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0938 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26 Identity = 78/236 (33.05%), Postives = 142/236 (60.17%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy TrEMBL
Match: A0A5A7TPN7 (Protein ALUMINUM SENSITIVE 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002020 PE=3 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129 Identity = 258/264 (97.73%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy TrEMBL
Match: A0A1S3B6R0 (protein ALUMINUM SENSITIVE 3 OS=Cucumis melo OX=3656 GN=LOC103486425 PE=3 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129 Identity = 258/264 (97.73%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy TrEMBL
Match: A0A0A0LA98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736580 PE=3 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 3.1e-129 Identity = 256/264 (96.97%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy TrEMBL
Match: A0A6J1FCQ7 (protein ALUMINUM SENSITIVE 3 OS=Cucurbita moschata OX=3662 GN=LOC111444416 PE=3 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.4e-126 Identity = 249/264 (94.32%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of Clc10G20290 vs. ExPASy TrEMBL
Match: A0A6J1L2R4 (protein ALUMINUM SENSITIVE 3 OS=Cucurbita maxima OX=3661 GN=LOC111498587 PE=3 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.2e-126 Identity = 250/264 (94.70%), Postives = 256/264 (96.97%), Query Frame = 0
BLAST of Clc10G20290 vs. TAIR 10
Match: AT2G37330.1 (aluminum sensitive 3 ) HSP 1 Score: 379.4 bits (973), Expect = 2.3e-105 Identity = 197/262 (75.19%), Postives = 232/262 (88.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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