Clc10G19790 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G19790
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr10: 33417869 .. 33418519 (+)
RNA-Seq Expression	Clc10G19790
Synteny	Clc10G19790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAATTTGGCATATCTAATCAGATCCAAAATCTTCACGAATCCCCGTCTCCAGATTCACATTGGAAACCTTTTTCTTCAACAGCTTTTCAGCGGTTCCCACAAGACGATTCAGATTGGTGTGTGTTGCAACGTGGACCGATCGAAGAAATATGGGCGTCCCTCAGATTATCATCTTGAATTCAGAATGATGAGCTAGCTTCAAGAATTGCAGCCAAAAGTAAATCTACCTAATACCGGAACTTGCGTAAGAAAATGCGTCCATAATTGGATTTAAGCATTGTAATAAACCCCAGTTCTTAGCTTTGTTGGCGGTGTATTTATGCGCTTCCACTCTTGGCGAGCCCGTCCCTAGAGATATCACAAGAAATTGTAGGGAAGACGATGAGCCGCCACATCCTTCTATTGTATCCTTCACTGCTTCGCTCACCGCCATCAATGAGGTTAAAATCCCTAACTCTAATCGTTGAGGACCTCAGTTGTGAATTGGTGGGTTGGAAGGTGAGGATGGTGAAGTACCTGAAGTTCAGACTCAAGAAAGGTGAGGATGGTGGCCGGAATGAGACCTCGGATTCCGCCGCCGTCAATGCTCAAAATAGTAATGAGCTTTACCGACGAAGAAGATGAAACTGCTGTGTTCATAAACTTGAT

mRNA sequence

CAACAATTTGGCATATCTAATCAGATCCAAAATCTTCACGAATCCCCGTCTCCAGATTCACATTGGAAACCTTTTTCTTCAACAGCTTTTCAGCGGTTCCCACAAGACGATTCAGATTGGTGTGTGTTGCAACGTGGACCGATCGAAGAAATATGGGCGTCCCTCAGATTATCATCTTGAATTCAGAATGATGAGCTAGCTTCAAGAATTGCAGCCAAAAGTAAATCTACCTAATACCGGAACTTGCGTAAGAAAATGCGTCCATAATTGGATTTAAGCATTGTAATAAACCCCAGTTCTTAGCTTTGTTGGCGGTGTATTTATGCGCTTCCACTCTTGGCGAGCCCGTCCCTAGAGATATCACAAGAAATTGTAGGGAAGACGATGAGCCGCCACATCCTTCTATTGTATCCTTCACTGCTTCGCTCACCGCCATCAATGAGGTTAAAATCCCTAACTCTAATCGTTGAGGACCTCAGTTGTGAATTGGTGGGTTGGAAGGTGAGGATGGTGAAGTACCTGAAGTTCAGACTCAAGAAAGGTGAGGATGGTGGCCGGAATGAGACCTCGGATTCCGCCGCCGTCAATGCTCAAAATAGTAATGAGCTTTACCGACGAAGAAGATGAAACTGCTGTGTTCATAAACTTGAT

Coding sequence (CDS)

ATGAGCCGCCACATCCTTCTATTGTATCCTTCACTGCTTCGCTCACCGCCATCAATGAGGTTAAAATCCCTAACTCTAATCGTTGAGGACCTCAGTTGTGAATTGGTGGGTTGGAAGGTGAGGATGGTGAAGTACCTGAAGTTCAGACTCAAGAAAGGTGAGGATGGTGGCCGGAATGAGACCTCGGATTCCGCCGCCGTCAATGCTCAAAATAGTAATGAGCTTTACCGACGAAGAAGATGA

Protein sequence

MSRHILLLYPSLLRSPPSMRLKSLTLIVEDLSCELVGWKVRMVKYLKFRLKKGEDGGRNETSDSAAVNAQNSNELYRRRR

Homology

The following BLAST results are available for this feature:

BLAST of Clc10G19790 vs.


Match Name	E-value	Identity	Description

BLAST of Clc10G19790 vs.


Match Name	E-value	Identity	Description

BLAST of Clc10G19790 vs.


Match Name	E-value	Identity	Description

BLAST of Clc10G19790 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G19790.1	Clc10G19790.1	mRNA