Clc10G18780 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G18780
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor ERF024-like
Location	ClcChr10: 32624511 .. 32626126 (-)
RNA-Seq Expression	Clc10G18780
Synteny	Clc10G18780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAGTTATTGAAGCTAGAATTTGTTTTTTACCATCCTTAAAGTTCTCAGTAGTTTAAATTCTAAAAGTTTCTTCAAGTAAAGTTCTATCAGTTTATATAATGGATGTGGGTTTCTAAAACAAATTACATTATCTAGATCTGTCTTTGTTTGGTAAAAAAAACATGGTCTTTATCAGTATAAAAGTCCATGTCAACAACAAGAACACCAAATAAAAGACCTCTACAAGATATATTAGAGAGTGTTTGAACTTCCAACTTCACGTGACATTTTCAACTATTATAACATACAATTAACTATTACAGCATACTCGTCTTCTTCTTTATTAGCGTGTTTACTCTTATCTACACAAACTAAATAGTAGTACCACTAGCCGACATAACCAACTTAGCACCCAAAAGTTCCCTTATGATTTTTTCTCTTTACTAGTCTAAGGTGCAGCTAAGTCCCATGCTCCTCTTCCTCCGCACACAAAAAATAAAATATTAATAAATTTTTTAAAAGAATAAATTTACCCTATGACAATCTTTTTTTAATTGATTGTCGAAGGGACTGCACCCAAGTTTTTTTTATTGGAAATTAGGAGTTTTTGAAGGTATATGTATCAGAAAATTAGGGTTTTCTCTCTATGTAGGTATGTGCTTTTCAAAATTAAAACCATCTCTCTGTCTCTCTGAGTACGGCCAAAGACCTCATGTTGAAAGCCACAATGTTTGAACCAATTGGGTAAGTGAAAATCTTGACCAAACACACACATATATATATATTAGAATTATTTAGATTTATTAGTCCCCAACATCTCTTGTCAACTCAAACTTTCATATATCATATATCCATCTTAATAATAATAATAAAAACAATAATGGTATTTAAGTTAAAATCCATTTTCTTTTCCCTTTCGTCCCCAAAATCTCCAAGCTGGCTTTGCCTGTGGCTTCCACCCAACCCCTCTTCACAACTCCGTTCATCTCCAACTGGTTTGCACTCTCTTCTTCCTCCCTTTCCCCATTTTCCCTCCTCCATAAATGGCTTCCCTTCCCTCCACCGTCTTCTTCAATCCCCTTCATGGCTTCTTCCTCCGGCCGCCACCCTGTCTACCGAGGTGTTCGCCGCCGCAACACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAGCCCAACCGTATTTGGTTAGGAACTTTCCCGACTGCTGAAATGGCCGCCGTCGCTTACGACGTTGCAGCCCTTGCCCTCAAGGGCCAAGACGCCGAGCTTAATTTCCCTAATTCTGCTTCGTCTCTCCCCATCCCCGCGTCTAGGTCACCATCTGATATTCAGGCGGCAGCTGCATCGGCCGCCGCTGCGCTTGGAGCGGCTGCGGCGGCCATGGAAGCACGAAATAATAACGGTTCTCGTCGTGGAACTAATTCCGGCGATGTTGTTTATGGAGGAAGATATGGTCAAGATGGATTGGGAAATCAGTTCATGGATGAAGACTTGATTTTTGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAATATCCATGGCGGAGAGGATGACGGCGACAACGGCGCTGACCAAAATCTTTGGAATTTTCCCTAA

mRNA sequence

ATGTATATTAAAATCCATTTTCTTTTCCCTTTCGTCCCCAAAATCTCCAAGCTGGCTTTGCCTGTGGCTTCCACCCAACCCCTCTTCACAACTCCGTTCATCTCCAACTGGTTTGCACTCTCTTCTTCCTCCCTTTCCCCATTTTCCCTCCTCCATAAATGGCTTCCCTTCCCTCCACCGTCTTCTTCAATCCCCTTCATGGCTTCTTCCTCCGGCCGCCACCCTGTCTACCGAGGTGTTCGCCGCCGCAACACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAGCCCAACCGTATTTGGTTAGGAACTTTCCCGACTGCTGAAATGGCCGCCGTCGCTTACGACGTTGCAGCCCTTGCCCTCAAGGGCCAAGACGCCGAGCTTAATTTCCCTAATTCTGCTTCGTCTCTCCCCATCCCCGCGTCTAGGTCACCATCTGATATTCAGGCGGCAGCTGCATCGGCCGCCGCTGCGCTTGGAGCGGCTGCGGCGGCCATGGAAGCACGAAATAATAACGGTTCTCGTCGTGGAACTAATTCCGGCGATGTTGTTTATGGAGGAAGATATGGTCAAGATGGATTGGGAAATCAGTTCATGGATGAAGACTTGATTTTTGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAATATCCATGGCGGAGAGGATGACGGCGACAACGGCGCTGACCAAAATCTTTGGAATTTTCCCTAA

Coding sequence (CDS)

ATGTATATTAAAATCCATTTTCTTTTCCCTTTCGTCCCCAAAATCTCCAAGCTGGCTTTGCCTGTGGCTTCCACCCAACCCCTCTTCACAACTCCGTTCATCTCCAACTGGTTTGCACTCTCTTCTTCCTCCCTTTCCCCATTTTCCCTCCTCCATAAATGGCTTCCCTTCCCTCCACCGTCTTCTTCAATCCCCTTCATGGCTTCTTCCTCCGGCCGCCACCCTGTCTACCGAGGTGTTCGCCGCCGCAACACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAGCCCAACCGTATTTGGTTAGGAACTTTCCCGACTGCTGAAATGGCCGCCGTCGCTTACGACGTTGCAGCCCTTGCCCTCAAGGGCCAAGACGCCGAGCTTAATTTCCCTAATTCTGCTTCGTCTCTCCCCATCCCCGCGTCTAGGTCACCATCTGATATTCAGGCGGCAGCTGCATCGGCCGCCGCTGCGCTTGGAGCGGCTGCGGCGGCCATGGAAGCACGAAATAATAACGGTTCTCGTCGTGGAACTAATTCCGGCGATGTTGTTTATGGAGGAAGATATGGTCAAGATGGATTGGGAAATCAGTTCATGGATGAAGACTTGATTTTTGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAATATCCATGGCGGAGAGGATGACGGCGACAACGGCGCTGACCAAAATCTTTGGAATTTTCCCTAA

Protein sequence

MYIKIHFLFPFVPKISKLALPVASTQPLFTTPFISNWFALSSSSLSPFSLLHKWLPFPPPSSSIPFMASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLWNFP

Homology

[Close]

BLAST of Clc10G18780 vs. NCBI nr
Match: XP_038906274.1 (ethylene-responsive transcription factor ERF024 [Benincasa hispida])

HSP 1 Score: 341.3 bits (874), Expect = 7.1e-90
Identity = 173/182 (95.05%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 67  MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 126
           MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ
Sbjct: 1   MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 60

Query: 127 DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVV 186
           DAELNFPNSASSLP+PASRSPSDIQAAAASAAAALGAAAAA+EARNN+GS RGTNS D+V
Sbjct: 61  DAELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARNNSGSYRGTNSSDIV 120

Query: 187 YGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLWN 246
           YGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGG+DD D+GADQNLWN
Sbjct: 121 YGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGDDDHDDGADQNLWN 180

Query: 247 FP 249
           FP
Sbjct: 181 FP 182

[Close]

BLAST of Clc10G18780 vs. NCBI nr
Match: XP_004138009.1 (ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hypothetical protein Csa_000912 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 8.4e-83
Identity = 167/183 (91.26%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 67  MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 126
           MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ
Sbjct: 1   MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 60

Query: 127 DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVV 186
           DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNN  SRRG++S DV+
Sbjct: 61  DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHSEDVM 120

Query: 187 YGGRYGQD-GLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLW 246
           YG RYGQ+  LGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFN HGG+D+ D G DQNLW
Sbjct: 121 YGARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDNRDFGTDQNLW 180

Query: 247 NFP 249
           NFP
Sbjct: 181 NFP 183

[Close]

BLAST of Clc10G18780 vs. NCBI nr
Match: XP_008442806.1 (PREDICTED: ethylene-responsive transcription factor ERF024-like [Cucumis melo] >KAA0043911.1 ethylene-responsive transcription factor ERF024-like protein [Cucumis melo var. makuwa] >TYK25226.1 ethylene-responsive transcription factor ERF024-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 165/183 (90.16%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 67  MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 126
           MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ
Sbjct: 1   MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 60

Query: 127 DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVV 186
           D ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNN+GSRRG++S DVV
Sbjct: 61  DTELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHSDDVV 120

Query: 187 YGGRYGQD-GLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLW 246
           Y  RYGQ+  L +QFMDEDLIFDMPNVLMNMAEGMLLSPPRFN HGG++D D G DQNLW
Sbjct: 121 YEARYGQEYELESQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDEDRDFGTDQNLW 180

Query: 247 NFP 249
           NFP
Sbjct: 181 NFP 183

[Close]

BLAST of Clc10G18780 vs. NCBI nr
Match: XP_022935579.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata])

HSP 1 Score: 288.1 bits (736), Expect = 7.2e-74
Identity = 151/181 (83.43%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 69  SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 128
           SSS RHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA
Sbjct: 2   SSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61

Query: 129 ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSG-DVVY 188
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNNNG  R   SG +  Y
Sbjct: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSY 121

Query: 189 GGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLWNF 248
           G RY ++ LGNQF+DEDLIFDMPNVLMNMAEGMLLSPPRFN+H G DD D+G DQNLWNF
Sbjct: 122 GTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVH-GNDDRDDGGDQNLWNF 181

[Close]

BLAST of Clc10G18780 vs. NCBI nr
Match: XP_023529104.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 2.7e-73
Identity = 150/181 (82.87%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 69  SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 128
           SSSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA
Sbjct: 2   SSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61

Query: 129 ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSG-DVVY 188
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNNNG  R   S  +  Y
Sbjct: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRGRSNFSATNSAY 121

Query: 189 GGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLWNF 248
           G RY ++ LGNQF+DEDLIFDMPNVLMNMAEGMLLSPPRFN+H G DD D+G DQ LWNF
Sbjct: 122 GTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVH-GNDDRDDGGDQTLWNF 181

[Close]

BLAST of Clc10G18780 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.5e-54
Identity = 121/182 (66.48%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 70  SSGRHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 129
           + GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 130 ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVVYG 189
           ELNFPNS SSLP P S SP+DIQAAAASAAAA GAA  A+   NNN       SG     
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQ----TSGVACMN 127

Query: 190 GRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDN--GADQNLWN 249
             Y    + N FMDEDL+FDMPNVLMNMAEGMLLSPPR  +     D D   G D  LWN
Sbjct: 128 SSYDNTNM-NGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWN 184

[Close]

BLAST of Clc10G18780 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-35
Identity = 89/182 (48.90%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 70  SSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAE 129
           S  + PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG++A 
Sbjct: 12  SRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAV 71

Query: 130 LNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAME--ARNNNGSRRGTNSGDVVY 189
           LNFP S  S P+P S S +DI+AAAA+AAA  G      E  A+    S   + + +   
Sbjct: 72  LNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHV 131

Query: 190 GGRYGQDG-LGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRF-NIHGGEDDGDNGADQNLW 248
               G     G +FMDE+ + +MPN+L NMAEGM+++PP +      +D  +N  D++LW
Sbjct: 132 DNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLW 191

[Close]

BLAST of Clc10G18780 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.4e-33
Identity = 83/175 (47.43%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 73  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 132
           ++PVYRG+R R +GKWVSEIREP+K  R+WLGT+PT EMAA AYDVAALALKG D  LNF
Sbjct: 86  KNPVYRGIRCR-SGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNF 145

Query: 133 PNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVVYGGRYG 192
           P+S  S PIP S S + I+ AAA+AAA  GAA AA++     G ++     D       G
Sbjct: 146 PDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKV----GQKKEDKVYDTAESSTMG 205

Query: 193 QDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLWNF 248
                  F+DE+ + +MP +L +MA+GM+++PP       +D  +N   ++LW++
Sbjct: 206 -------FVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGESLWSY 248

[Close]

BLAST of Clc10G18780 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 87/183 (47.54%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 73  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 132
           RHP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G+ A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 133 PNSASSLPIPASRSPSDIQAAAASAAAAL--------GAAAAAMEARNNNGSRRGTNSGD 192
            +SA  L IP +  P +IQ AA+ AA A            AA  E     G R G    +
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 193 VVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNL 248
              GG +        +MD++ +  MPN   NMAEGMLL PP   +    +D D   D +L
Sbjct: 170 EQNGGVF--------YMDDEALLGMPNFFENMAEGMLLPPP--EVGWNHNDFDGVGDVSL 222

[Close]

BLAST of Clc10G18780 vs. ExPASy Swiss-Prot
Match: Q9FJ90 (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 91/200 (45.50%), Postives = 116/200 (58.00%), Query Frame = 0


Query: 56  PFPPPSSSIPFMASS---SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMA 115
           P P PS   P   ++   SG+H ++RG+R RN GKWVSEIREPRK  RIWLGT+P  EMA
Sbjct: 41  PSPRPSGGSPARRTATGLSGKHSIFRGIRLRN-GKWVSEIREPRKTTRIWLGTYPVPEMA 100

Query: 116 AVAYDVAALALKGQDAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARN 175
           A AYDVAALALKG DA LNFP  A +   P S S +DI+AAA        + AA M+  +
Sbjct: 101 AAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAA--------SRAAEMKQPD 160

Query: 176 NNGSRR---GTNSGDVVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNI 235
             G  +       G          +    +FMDE+ + +MP +L  MAEGML+SPPR  I
Sbjct: 161 QGGDEKVLEPVQPGKEEELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMI 220

Query: 236 HG--GEDDGDNGADQNLWNF 248
           H    +D  +N    NLW++
Sbjct: 221 HPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of Clc10G18780 vs. ExPASy TrEMBL
Match: A0A0A0LBA2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 4.1e-83
Identity = 167/183 (91.26%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 67  MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 126
           MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ
Sbjct: 1   MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 60

Query: 127 DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVV 186
           DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNN  SRRG++S DV+
Sbjct: 61  DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHSEDVM 120

Query: 187 YGGRYGQD-GLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLW 246
           YG RYGQ+  LGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFN HGG+D+ D G DQNLW
Sbjct: 121 YGARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDNRDFGTDQNLW 180

Query: 247 NFP 249
           NFP
Sbjct: 181 NFP 183

[Close]

BLAST of Clc10G18780 vs. ExPASy TrEMBL
Match: A0A5A7TQS0 (Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003560 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 165/183 (90.16%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 67  MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 126
           MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ
Sbjct: 1   MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 60

Query: 127 DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVV 186
           D ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNN+GSRRG++S DVV
Sbjct: 61  DTELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHSDDVV 120

Query: 187 YGGRYGQD-GLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLW 246
           Y  RYGQ+  L +QFMDEDLIFDMPNVLMNMAEGMLLSPPRFN HGG++D D G DQNLW
Sbjct: 121 YEARYGQEYELESQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDEDRDFGTDQNLW 180

Query: 247 NFP 249
           NFP
Sbjct: 181 NFP 183

[Close]

BLAST of Clc10G18780 vs. ExPASy TrEMBL
Match: A0A1S3B634 (ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=LOC103486579 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.9e-82
Identity = 165/183 (90.16%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 67  MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 126
           MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ
Sbjct: 1   MASSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQ 60

Query: 127 DAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVV 186
           D ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNN+GSRRG++S DVV
Sbjct: 61  DTELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHSDDVV 120

Query: 187 YGGRYGQD-GLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLW 246
           Y  RYGQ+  L +QFMDEDLIFDMPNVLMNMAEGMLLSPPRFN HGG++D D G DQNLW
Sbjct: 121 YEARYGQEYELESQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDEDRDFGTDQNLW 180

Query: 247 NFP 249
           NFP
Sbjct: 181 NFP 183

[Close]

BLAST of Clc10G18780 vs. ExPASy TrEMBL
Match: A0A6J1F5U1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111442412 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.5e-74
Identity = 151/181 (83.43%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 69  SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 128
           SSS RHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA
Sbjct: 2   SSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61

Query: 129 ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSG-DVVY 188
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNNNG  R   SG +  Y
Sbjct: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSY 121

Query: 189 GGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLWNF 248
           G RY ++ LGNQF+DEDLIFDMPNVLMNMAEGMLLSPPRFN+H G DD D+G DQNLWNF
Sbjct: 122 GTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVH-GNDDRDDGGDQNLWNF 181

[Close]

BLAST of Clc10G18780 vs. ExPASy TrEMBL
Match: A0A6J1CUD0 (ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 GN=LOC111014369 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.8e-73
Identity = 154/184 (83.70%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 69  SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 128
           +SSGRHPVYRGVRRRNT KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKGQDA
Sbjct: 2   ASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQDA 61

Query: 129 ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNN---NGSRRGTNSGDV 188
           ELNFPNSASSLP+PASRSPSDIQAAAASAAAALGAAAAAMEA N+   N S  GT+ GD 
Sbjct: 62  ELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAMEAGNSHPRNYSSSGTHYGD- 121

Query: 189 VYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGE-DDGDNGADQNL 248
           V G RY Q   G++F+DEDLIFDMPNVLMNMAEGMLLSPPRFN+HGG+ DDGD+  DQNL
Sbjct: 122 VRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGDQNL 181

[Close]

BLAST of Clc10G18780 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 6.1e-55
Identity = 121/182 (66.48%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 70  SSGRHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 129
           + GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 130 ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVVYG 189
           ELNFPNS SSLP P S SP+DIQAAAASAAAA GAA  A+   NNN       SG     
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQ----TSGVACMN 127

Query: 190 GRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDN--GADQNLWN 249
             Y    + N FMDEDL+FDMPNVLMNMAEGMLLSPPR  +     D D   G D  LWN
Sbjct: 128 SSYDNTNM-NGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWN 184

[Close]

BLAST of Clc10G18780 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-36
Identity = 89/182 (48.90%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 70  SSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAE 129
           S  + PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG++A 
Sbjct: 12  SRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAV 71

Query: 130 LNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAME--ARNNNGSRRGTNSGDVVY 189
           LNFP S  S P+P S S +DI+AAAA+AAA  G      E  A+    S   + + +   
Sbjct: 72  LNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHV 131

Query: 190 GGRYGQDG-LGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRF-NIHGGEDDGDNGADQNLW 248
               G     G +FMDE+ + +MPN+L NMAEGM+++PP +      +D  +N  D++LW
Sbjct: 132 DNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLW 191

[Close]

BLAST of Clc10G18780 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 141.7 bits (356), Expect = 7.7e-34
Identity = 87/183 (47.54%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 73  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 132
           RHP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G+ A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 133 PNSASSLPIPASRSPSDIQAAAASAAAAL--------GAAAAAMEARNNNGSRRGTNSGD 192
            +SA  L IP +  P +IQ AA+ AA A            AA  E     G R G    +
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 193 VVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNL 248
              GG +        +MD++ +  MPN   NMAEGMLL PP   +    +D D   D +L
Sbjct: 170 EQNGGVF--------YMDDEALLGMPNFFENMAEGMLLPPP--EVGWNHNDFDGVGDVSL 222

[Close]

BLAST of Clc10G18780 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-33
Identity = 91/200 (45.50%), Postives = 116/200 (58.00%), Query Frame = 0


Query: 56  PFPPPSSSIPFMASS---SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMA 115
           P P PS   P   ++   SG+H ++RG+R RN GKWVSEIREPRK  RIWLGT+P  EMA
Sbjct: 41  PSPRPSGGSPARRTATGLSGKHSIFRGIRLRN-GKWVSEIREPRKTTRIWLGTYPVPEMA 100

Query: 116 AVAYDVAALALKGQDAELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARN 175
           A AYDVAALALKG DA LNFP  A +   P S S +DI+AAA        + AA M+  +
Sbjct: 101 AAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAA--------SRAAEMKQPD 160

Query: 176 NNGSRR---GTNSGDVVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNI 235
             G  +       G          +    +FMDE+ + +MP +L  MAEGML+SPPR  I
Sbjct: 161 QGGDEKVLEPVQPGKEEELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMI 220

Query: 236 HG--GEDDGDNGADQNLWNF 248
           H    +D  +N    NLW++
Sbjct: 221 HPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of Clc10G18780 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 139.4 bits (350), Expect = 3.8e-33
Identity = 87/175 (49.71%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 73  RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 132
           RHP+YRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G+ A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 133 PNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNNGSRRGTNSGDVVYGGRYG 192
            +SA  L IP S    DIQ AAA AA A            N+G        + +Y     
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAF-QDETCDTTTTNHGLDMEETMVEAIYTPEQS 163

Query: 193 QDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGEDDGDNGADQNLWNF 248
           +   G  +MDE+ +F MP +L NMAEGMLL PP    +    DG+   D +LW++
Sbjct: 164 E---GAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNY-DGEGDGDVSLWSY 213

The following BLAST results are available for this feature:

BLAST of Clc10G18780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906274.1	7.1e-90	95.05	ethylene-responsive transcription factor ERF024 [Benincasa hispida]	[more]
XP_004138009.1	8.4e-83	91.26	ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hy...	[more]
XP_008442806.1	1.2e-81	90.16	PREDICTED: ethylene-responsive transcription factor ERF024-like [Cucumis melo] >...	[more]
XP_022935579.1	7.2e-74	83.43	ethylene-responsive transcription factor ERF024-like [Cucurbita moschata]	[more]
XP_023529104.1	2.7e-73	82.87	ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of Clc10G18780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJR0	8.5e-54	66.48	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	2.3e-35	48.90	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9CAN9	6.4e-33	47.43	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJ93	1.1e-32	47.54	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
Q9FJ90	1.4e-32	45.50	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc10G18780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBA2	4.1e-83	91.26	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=...	[more]
A0A5A7TQS0	5.9e-82	90.16	Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var...	[more]
A0A1S3B634	5.9e-82	90.16	ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1F5U1	3.5e-74	83.43	ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1CUD0	3.8e-73	83.70	ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Clc10G18780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36450.1	6.1e-55	66.48	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	1.7e-36	48.90	Integrase-type DNA-binding superfamily protein	[more]
AT5G51990.1	7.7e-34	47.54	C-repeat-binding factor 4	[more]
AT5G52020.1	1.0e-33	45.50	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	3.8e-33	49.71	C-repeat/DRE binding factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 77..88 score: 65.15 coord: 99..115 score: 66.42
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 76..139 e-value: 1.8E-33 score: 127.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 75..125 e-value: 1.5E-12 score: 47.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 76..133 score: 23.037476
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 77..135 e-value: 1.41465E-30 score: 106.202
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 76..134 e-value: 2.4E-24 score: 87.2
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 68..248
None	No IPR available	PANTHER	PTHR31985:SF121	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024	coord: 68..248
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 76..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G18780.2	Clc10G18780.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity