Clc10G18080 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G18080
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Transcription repressor
Location	ClcChr10: 31946989 .. 31948019 (-)
RNA-Seq Expression	Clc10G18080
Synteny	Clc10G18080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACCTTCCATCTTCCACTTCCTATCTGCCTCCTCAAAATCTCTCTCTTTCTCACTGAGCCGCCATTAATGTCCTCTAGAAAAAAGCTCCGATTTTGAAGCTCCAAAACAAATTTGAAATCAAACCCACAAACACAATCCGTTTCAGAGAGATGTTAACGAAGAAGAAGAAGATGATGATGATGATGAGGCTACCGTCTCTCTTCAAATCCTTAGGAGTAGACGACAAGTCGACTTTTCCCTGGCCGTCATGTCGGCAGCCAAGAACCCTCTCTTTCCGAACCACCGCCGCCGTTGCCGCCGCCGCCACTACAGACTCTTCCGACTCCTTCTTCACACTCTCCTCCGAGTCCTCCGGCAGCCTCTCGACGACGTCGGAGTGCTCCGGCGGCGACCCAATCGAGAGAATGATTCGAGACCTGAGGTCCGCCAAGAGGCTCCGCTTCGAACCCACCGGAAAATCAAGCTCGATTGTGGAAAAGGACGACGTATCAGCGCCGTTGAAGGAAGGGACGACGGTGATGTCGATGGATTCCGATGACCCATATTCGGATTTTAGGAAATCGATGGAGGAGATGGTGGAAGCTCATGGAATGAAGGATTGGGAGAGTTTAGAAGAGCTATTGAGTTGGTATTTGAGAGTTAATGGGAAAAAAAACCATGGATTTATTCTTGGAGCTTTTGTGGATTTGTTGGTCTCTCTTGCAATGGCGGCTTCTTGTTCTTCTTCTTGTTCTTCTTCTTGTTCTTCATCTTCTTCATCATTGTGTTATTCTTCTTCCTCTTTACCTTGTGTATCCTCATCCATGGAGATTGAGGAGATCACTTCATTACATGAACGTCGTCATCATGTTTTCTCTTAAGGTAAATTACATATTATTTAATTTGTTTTTAAAATATATATAGAAATTACTCCATCTATAACTCCATTTATAAAAGAGTAGAAATAAGAATTTAAATTGGTTGTAATTACACTTTTCAAAATAGTATACTACACATAATTATGGAGATAGTGTTACGAGTGCAAATAAA

mRNA sequence

TCACCTTCCATCTTCCACTTCCTATCTGCCTCCTCAAAATCTCTCTCTTTCTCACTGAGCCGCCATTAATGTCCTCTAGAAAAAAGCTCCGATTTTGAAGCTCCAAAACAAATTTGAAATCAAACCCACAAACACAATCCGTTTCAGAGAGATGTTAACGAAGAAGAAGAAGATGATGATGATGATGAGGCTACCGTCTCTCTTCAAATCCTTAGGAGTAGACGACAAGTCGACTTTTCCCTGGCCGTCATGTCGGCAGCCAAGAACCCTCTCTTTCCGAACCACCGCCGCCGTTGCCGCCGCCGCCACTACAGACTCTTCCGACTCCTTCTTCACACTCTCCTCCGAGTCCTCCGGCAGCCTCTCGACGACGTCGGAGTGCTCCGGCGGCGACCCAATCGAGAGAATGATTCGAGACCTGAGGTCCGCCAAGAGGCTCCGCTTCGAACCCACCGGAAAATCAAGCTCGATTGTGGAAAAGGACGACGTATCAGCGCCGTTGAAGGAAGGGACGACGGTGATGTCGATGGATTCCGATGACCCATATTCGGATTTTAGGAAATCGATGGAGGAGATGGTGGAAGCTCATGGAATGAAGGATTGGGAGAGTTTAGAAGAGCTATTGAGTTGGTATTTGAGAGTTAATGGGAAAAAAAACCATGGATTTATTCTTGGAGCTTTTGTGGATTTGTTGGTCTCTCTTGCAATGGCGGCTTCTTGTTCTTCTTCTTGTTCTTCTTCTTGTTCTTCATCTTCTTCATCATTGTGTTATTCTTCTTCCTCTTTACCTTGTGTATCCTCATCCATGGAGATTGAGGAGATCACTTCATTACATGAACGTCGTCATCATGTTTTCTCTTAAGGTAAATTACATATTATTTAATTTGTTTTTAAAATATATATAGAAATTACTCCATCTATAACTCCATTTATAAAAGAGTAGAAATAAGAATTTAAATTGGTTGTAATTACACTTTTCAAAATAGTATACTACACATAATTATGGAGATAGTGTTACGAGTGCAAATAAA

Coding sequence (CDS)

ATGTTAACGAAGAAGAAGAAGATGATGATGATGATGAGGCTACCGTCTCTCTTCAAATCCTTAGGAGTAGACGACAAGTCGACTTTTCCCTGGCCGTCATGTCGGCAGCCAAGAACCCTCTCTTTCCGAACCACCGCCGCCGTTGCCGCCGCCGCCACTACAGACTCTTCCGACTCCTTCTTCACACTCTCCTCCGAGTCCTCCGGCAGCCTCTCGACGACGTCGGAGTGCTCCGGCGGCGACCCAATCGAGAGAATGATTCGAGACCTGAGGTCCGCCAAGAGGCTCCGCTTCGAACCCACCGGAAAATCAAGCTCGATTGTGGAAAAGGACGACGTATCAGCGCCGTTGAAGGAAGGGACGACGGTGATGTCGATGGATTCCGATGACCCATATTCGGATTTTAGGAAATCGATGGAGGAGATGGTGGAAGCTCATGGAATGAAGGATTGGGAGAGTTTAGAAGAGCTATTGAGTTGGTATTTGAGAGTTAATGGGAAAAAAAACCATGGATTTATTCTTGGAGCTTTTGTGGATTTGTTGGTCTCTCTTGCAATGGCGGCTTCTTGTTCTTCTTCTTGTTCTTCTTCTTGTTCTTCATCTTCTTCATCATTGTGTTATTCTTCTTCCTCTTTACCTTGTGTATCCTCATCCATGGAGATTGAGGAGATCACTTCATTACATGAACGTCGTCATCATGTTTTCTCTTAA

Protein sequence

MLTKKKKMMMMMRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVDLLVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLPCVSSSMEIEEITSLHERRHHVFS

Homology

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BLAST of Clc10G18080 vs. NCBI nr
Match: XP_038905324.1 (transcription repressor OFP15-like [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.8e-98
Identity = 213/240 (88.75%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MLTKKKKMMMMMRLPSLFK-SLGVDDKSTFPWPSCRQPRTLSFR-TTAAVAAAATTDSSD 60
           MLTKKKKMMMMMRLPSLFK S G DDKSTFPWPSCRQPRTLSFR TT A  AAA TDSSD
Sbjct: 1   MLTKKKKMMMMMRLPSLFKYSSGPDDKSTFPWPSCRQPRTLSFRTTTTAPVAAAATDSSD 60

Query: 61  SFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSAPLK 120
           SFFTLSSESSGSLST SECSGGDPIERMI++LRSAKRLRFEPTGKSSSIVE++ VSAPL 
Sbjct: 61  SFFTLSSESSGSLSTASECSGGDPIERMIQELRSAKRLRFEPTGKSSSIVEEETVSAPLN 120

Query: 121 EGTTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFV 180
           EGT VMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFV
Sbjct: 121 EGTRVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFV 180

Query: 181 DLLVSLAMAASCSSSCSSSCSSSSSSL--CYSSSSLPCVSSSMEIEEITSLHERRHHVFS 237
           DLLVSLAMAA   +S SSSCSSSSSSL  C SSSSLPCVSSSMEIEEITSL E  HHVFS
Sbjct: 181 DLLVSLAMAA---ASSSSSCSSSSSSLCCCSSSSSLPCVSSSMEIEEITSLDEHHHHVFS 237

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BLAST of Clc10G18080 vs. NCBI nr
Match: XP_004136703.2 (transcription repressor OFP15 [Cucumis sativus] >KGN59180.1 hypothetical protein Csa_002114 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 8.3e-96
Identity = 208/238 (87.39%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MLTKKKKMMMMMRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSDSF 60
           MLTKKKKMMMMMRLPSLFK L +DDKSTFPWPSCRQPRTLSFRTT+A A A  TDSSDSF
Sbjct: 1   MLTKKKKMMMMMRLPSLFKYLAIDDKSTFPWPSCRQPRTLSFRTTSA-AVATATDSSDSF 60

Query: 61  FTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSAPLKEG 120
           FTLSSESSGSLST SE SGGDPIERMIRDLRS KRL FEPTGKSSSIVE D VS PLKEG
Sbjct: 61  FTLSSESSGSLSTVSESSGGDPIERMIRDLRSTKRLHFEPTGKSSSIVEDDTVSHPLKEG 120

Query: 121 TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVDL 180
           TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELL+WYLRVNGKKNHGFILGAFVDL
Sbjct: 121 TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLNWYLRVNGKKNHGFILGAFVDL 180

Query: 181 LVSLAMA-ASCSSSCSSS-CSSSSSSLCYSSSSLPCVSSSMEIEEITSLHERRHHVFS 237
           LVSLAMA +S SSSCSSS C  SSSS   SSSSLPCVSSSMEIEEI+SL E  HHV+S
Sbjct: 181 LVSLAMASSSSSSSCSSSLCCYSSSS---SSSSLPCVSSSMEIEEISSLDEHHHHVYS 234

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BLAST of Clc10G18080 vs. NCBI nr
Match: KAA0043836.1 (transcription repressor OFP15-like [Cucumis melo var. makuwa] >TYK25297.1 transcription repressor OFP15-like [Cucumis melo var. makuwa])

HSP 1 Score: 355.1 bits (910), Expect = 4.5e-94
Identity = 201/236 (85.17%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MLTKKKKMMMMMRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSDSF 60
           MLTKKKKMMMMMRLPSLFK L +DDKSTFPWPSCRQPRTLSFRTT+A A A  TDSS SF
Sbjct: 1   MLTKKKKMMMMMRLPSLFKILAIDDKSTFPWPSCRQPRTLSFRTTSA-AVATATDSSGSF 60

Query: 61  FTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSAPLKEG 120
           FTLSSESSGSLST SE SGGDPIERMIRDLRS KRL FEPTGKSSSIVE + VS PLKEG
Sbjct: 61  FTLSSESSGSLSTVSESSGGDPIERMIRDLRSTKRLHFEPTGKSSSIVEDETVSHPLKEG 120

Query: 121 TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVDL 180
           TTVMSMDS+DPYSDFRKSMEEMVEAHGMKDWESLEELL+WYLRVNGKKNHGFILGAFVDL
Sbjct: 121 TTVMSMDSNDPYSDFRKSMEEMVEAHGMKDWESLEELLNWYLRVNGKKNHGFILGAFVDL 180

Query: 181 LVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLPCVSSSMEIEEITSLHERRHHVFS 237
           LVSLAMA+S SSS SSS S    S   SSSSLPCVSSSMEIEEI+SL E  HHV+S
Sbjct: 181 LVSLAMASSSSSSSSSSSSLCCYSSSSSSSSLPCVSSSMEIEEISSLDEHHHHVYS 235

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BLAST of Clc10G18080 vs. NCBI nr
Match: XP_022935216.1 (transcription repressor OFP15-like [Cucurbita moschata])

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-79
Identity = 181/246 (73.58%), Postives = 203/246 (82.52%), Query Frame = 0


Query: 1   MLT--KKKKMMMMMRLPSLFKSLGV--DDKSTFPWPSCRQPRTLSFR-TTAAVAAAATTD 60
           MLT  KKKKMMMMM+LPSLFKS G+  +DKS +PWPSCRQPRTLSFR TTAA AAAA T+
Sbjct: 1   MLTKKKKKKMMMMMKLPSLFKSSGLHHNDKSAWPWPSCRQPRTLSFRTTTAAAAAAAATE 60

Query: 61  SSDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDD--- 120
           SSDSFFTLSSESSGSLST SECSGGDPIERMIR LRS +RL FEP GKS SI++++    
Sbjct: 61  SSDSFFTLSSESSGSLSTASECSGGDPIERMIRGLRSTERLLFEPAGKSRSILKEEKKKA 120

Query: 121 -VSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHG 180
            V  PLKEGTTV+SMDSD+P+ DFRKSMEEMVEA+G++DW+SLEELLSWYL VNGK NHG
Sbjct: 121 AVPPPLKEGTTVVSMDSDNPFWDFRKSMEEMVEAYGLRDWKSLEELLSWYLSVNGKNNHG 180

Query: 181 FILGAFVDLLVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLPCVSSSMEIEEITSL--HE 236
           FILGAF+DLLVSLAMAA+ +++ SSS          SSS LPCVSSSMEIEEITSL  H 
Sbjct: 181 FILGAFLDLLVSLAMAAAAAAAASSS----------SSSFLPCVSSSMEIEEITSLDEHH 236

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BLAST of Clc10G18080 vs. NCBI nr
Match: XP_023528403.1 (transcription repressor OFP15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-79
Identity = 180/240 (75.00%), Postives = 203/240 (84.58%), Query Frame = 0


Query: 1   MLT--KKKKMMMMMRLPSLFKSLGV--DDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDS 60
           MLT  KKKKMMMMM+LPSLFKS G+  +DKS +PWPSCRQPRTLSFRTT A AAA  T+S
Sbjct: 1   MLTKKKKKKMMMMMKLPSLFKSSGLHHNDKSAWPWPSCRQPRTLSFRTTTA-AAATATES 60

Query: 61  SDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSA- 120
           SDSFFTLSSESSGS ST SECSGGDPIERMIR LRS +RL FEP GKS SI++++  +A 
Sbjct: 61  SDSFFTLSSESSGSFSTASECSGGDPIERMIRGLRSTERLLFEPAGKSRSILKEEKKAAV 120

Query: 121 --PLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFI 180
             PLKEGTTV+SMDSDDP+ DFRKSMEEMVEA+G++DW+SLEELLSWYL VNGK NHGFI
Sbjct: 121 PPPLKEGTTVVSMDSDDPFWDFRKSMEEMVEAYGLRDWKSLEELLSWYLSVNGKNNHGFI 180

Query: 181 LGAFVDLLVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLPCVSSSMEIEEITSLHERRHH 234
           +GAF+DLLVSLAMAA+ +++ SSS SS SS    SSS LPCVSSSMEIEEITSL E  HH
Sbjct: 181 IGAFLDLLVSLAMAAAVAAAASSSSSSISS----SSSFLPCVSSSMEIEEITSLDEHHHH 235

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BLAST of Clc10G18080 vs. ExPASy Swiss-Prot
Match: Q9SJ45 (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-21
Identity = 98/268 (36.57%), Postives = 135/268 (50.37%), Query Frame = 0


Query: 12  MRLPSLFKSLGV------DDKSTFPWPSCRQ-PRTLSFRTTAAVAAAATTDSSDSFFTLS 71
           M+LP L K+            S++PWPSC Q P+TLSFR T            D    L 
Sbjct: 1   MKLPFLNKNHSTSSYSSNSSSSSWPWPSCNQNPKTLSFRATITFTNPIHDQDDDELDLLD 60

Query: 72  SESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEK---DDVSAPLKEGT 131
                           D +E +I+ LRS++RL FE  G+++SI+E+          +EG 
Sbjct: 61  PPEI-----------TDSVENVIKGLRSSERLIFESKGETNSILEEATSKREEEDEEEGF 120

Query: 132 TVMSMDSDDPYSDFRKSMEEMVEAHGM-KDWESLEELLSWYLRVNGKKNHGFILGAFVDL 191
            + S++SDDPYSDF++SMEEMVEAH +  DW+SLE+LL  +L+VN K +H +I  AFVDL
Sbjct: 121 MLFSLESDDPYSDFKRSMEEMVEAHALHHDWKSLEKLLLQFLKVNAKTSHRYIFAAFVDL 180

Query: 192 LVSLAM------------------------AASCSSSCS----------------SSCSS 226
           L++LA+                        A   S+SC                 +SCSS
Sbjct: 181 LMNLALDTKKAIINNDISKDDGVSASRAAAAGEASTSCCNSMTLGESPSSPLSFYTSCSS 240

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BLAST of Clc10G18080 vs. ExPASy Swiss-Prot
Match: Q9FMC8 (Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.3e-21
Identity = 90/258 (34.88%), Postives = 136/258 (52.71%), Query Frame = 0


Query: 12  MRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATT----------------- 71
           M+L SLFK            P C   +TLSFR    +     +                 
Sbjct: 6   MKLSSLFKG---GAGGLLAVPLCYNAKTLSFRVGDDMIKTVNSVFFDHHHNNNNGGDLLE 65

Query: 72  -DSSDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEK--- 131
            ++ +S+FT SSE++   + + +    + +E ++R +  ++RL F+P G +SSI+E+   
Sbjct: 66  AETPESWFTNSSETASHSTESDQDLDAESLEMVVRGVVRSERLFFDP-GVTSSILEEIEE 125

Query: 132 ---------------DDVSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHG--MKDWES 191
                          +D S P++E +  ++M+S+DPY DFR+SMEEMV +HG   KDWES
Sbjct: 126 KSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRSMEEMVTSHGELAKDWES 185

Query: 192 LEELLSWYLRVNGKKNHGFILGAFVDLLVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLP 232
           LE +L+WYLR+NG+K+HG I+ AFVDLL  L+ + +  +S S S S+  S+   S  S P
Sbjct: 186 LESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASVSDSARYSTAVSSLPSSP 245

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BLAST of Clc10G18080 vs. ExPASy Swiss-Prot
Match: Q9SVD5 (Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.4e-18
Identity = 93/258 (36.05%), Postives = 134/258 (51.94%), Query Frame = 0


Query: 8   MMMMMRLP--------SLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSD- 67
           M+  M+LP        S F S      S++PWPS  Q    +  + A+       D  + 
Sbjct: 1   MVRKMKLPFLNKNTSSSSFSSNSSSSSSSWPWPSSHQQNLKTISSKASFIVNKPKDVYEP 60

Query: 68  -----SFFTLSSESS-GSLSTTSECSGGDP----IERMIRDLRSAKRLRFEPTGKSSSIV 127
                SF +  S SS  S S+TS      P    IE +I+ L+S+KRL FE  G S+SI+
Sbjct: 61  EPPPRSFSSSPSSSSYSSFSSTSHAIENPPEIESIENVIKGLKSSKRLIFERRGTSNSIL 120

Query: 128 E---KDDVSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHGM-KDWESLEELLSWYLRV 187
           E   K D     ++G  ++S++S+DPY+DF+ SME+MVE H +  DW SLE+LL W+L+V
Sbjct: 121 EEATKRDDHEEEEDGLMLLSLESNDPYTDFKNSMEKMVEVHVLHHDWISLEKLLFWFLKV 180

Query: 188 NGKKNHGFILGAFVDLLVSLAMAASCSSS--------CSSSCSSSSSSLCYSSSSLPCVS 235
           N K +H +I  AFVDL+++LA+  S   +           S SSS     YSSS     S
Sbjct: 181 NVKASHRYIFAAFVDLVLNLAVGPSKDVAGEPNSDVVVEDSLSSSWPVSLYSSSD-ENSS 240

[Close]

BLAST of Clc10G18080 vs. ExPASy Swiss-Prot
Match: Q9S7T5 (Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.7e-09
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 92  SAKRLRFEPTGKSSSIVEKDDVSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAH-GMK- 151
           S  R   E T  SS    +  +  P  E    +   +D+P  DFR+SM EM+E+  GM+ 
Sbjct: 165 SEGRPSMETTSTSSERQSRSTLVLP--ENCIAVLRYTDEPQEDFRQSMVEMMESKLGMRE 224

Query: 152 ---DWESLEELLSWYLRVNGKKNHGFILGAFVDLLVSL 185
              DW+ +EELL  YL +N KK+H FIL AFVDL+++L
Sbjct: 225 SEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIAL 260

[Close]

BLAST of Clc10G18080 vs. ExPASy Swiss-Prot
Match: F4I8R6 (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.5e-07
Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 38  RTLSFRTTAAVAAAATTDSSDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLR---SAK 97
           R LS      V  ++T  +S S    SS SS S   +         +    DL    +++
Sbjct: 55  RRLSKPLIHDVEPSSTFTASTSTAANSSSSSASYDDSDNYGFAPDDDSPPPDLTAVLASR 114

Query: 98  RLRFEPTGKSSSIVEKDDV---------SAPLKEGTTVMS-MDSDDPYSDFRKSMEEMVE 157
           R  F   G S+SI +  D+         +  L  GT V   + S DPY+DFR+SM+EM++
Sbjct: 115 RFFFSSPGCSNSITDSPDLRCRDNYDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMID 174

Query: 158 ----AHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVDLLVSL 185
               A  ++ +E L ELL  YL +N    H FI+ AF D+LVSL
Sbjct: 175 AVTNAGDLRRYEFLHELLLSYLSLNAADTHKFIIRAFADILVSL 218

[Close]

BLAST of Clc10G18080 vs. ExPASy TrEMBL
Match: A0A0A0LB05 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_3G778360 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.0e-96
Identity = 208/238 (87.39%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MLTKKKKMMMMMRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSDSF 60
           MLTKKKKMMMMMRLPSLFK L +DDKSTFPWPSCRQPRTLSFRTT+A A A  TDSSDSF
Sbjct: 1   MLTKKKKMMMMMRLPSLFKYLAIDDKSTFPWPSCRQPRTLSFRTTSA-AVATATDSSDSF 60

Query: 61  FTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSAPLKEG 120
           FTLSSESSGSLST SE SGGDPIERMIRDLRS KRL FEPTGKSSSIVE D VS PLKEG
Sbjct: 61  FTLSSESSGSLSTVSESSGGDPIERMIRDLRSTKRLHFEPTGKSSSIVEDDTVSHPLKEG 120

Query: 121 TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVDL 180
           TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELL+WYLRVNGKKNHGFILGAFVDL
Sbjct: 121 TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLNWYLRVNGKKNHGFILGAFVDL 180

Query: 181 LVSLAMA-ASCSSSCSSS-CSSSSSSLCYSSSSLPCVSSSMEIEEITSLHERRHHVFS 237
           LVSLAMA +S SSSCSSS C  SSSS   SSSSLPCVSSSMEIEEI+SL E  HHV+S
Sbjct: 181 LVSLAMASSSSSSSCSSSLCCYSSSS---SSSSLPCVSSSMEIEEISSLDEHHHHVYS 234

[Close]

BLAST of Clc10G18080 vs. ExPASy TrEMBL
Match: A0A5A7TP27 (Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004330 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.2e-94
Identity = 201/236 (85.17%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MLTKKKKMMMMMRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSDSF 60
           MLTKKKKMMMMMRLPSLFK L +DDKSTFPWPSCRQPRTLSFRTT+A A A  TDSS SF
Sbjct: 1   MLTKKKKMMMMMRLPSLFKILAIDDKSTFPWPSCRQPRTLSFRTTSA-AVATATDSSGSF 60

Query: 61  FTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSAPLKEG 120
           FTLSSESSGSLST SE SGGDPIERMIRDLRS KRL FEPTGKSSSIVE + VS PLKEG
Sbjct: 61  FTLSSESSGSLSTVSESSGGDPIERMIRDLRSTKRLHFEPTGKSSSIVEDETVSHPLKEG 120

Query: 121 TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVDL 180
           TTVMSMDS+DPYSDFRKSMEEMVEAHGMKDWESLEELL+WYLRVNGKKNHGFILGAFVDL
Sbjct: 121 TTVMSMDSNDPYSDFRKSMEEMVEAHGMKDWESLEELLNWYLRVNGKKNHGFILGAFVDL 180

Query: 181 LVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLPCVSSSMEIEEITSLHERRHHVFS 237
           LVSLAMA+S SSS SSS S    S   SSSSLPCVSSSMEIEEI+SL E  HHV+S
Sbjct: 181 LVSLAMASSSSSSSSSSSSLCCYSSSSSSSSLPCVSSSMEIEEISSLDEHHHHVYS 235

[Close]

BLAST of Clc10G18080 vs. ExPASy TrEMBL
Match: A0A6J1F3Y1 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111442166 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.2e-79
Identity = 181/246 (73.58%), Postives = 203/246 (82.52%), Query Frame = 0


Query: 1   MLT--KKKKMMMMMRLPSLFKSLGV--DDKSTFPWPSCRQPRTLSFR-TTAAVAAAATTD 60
           MLT  KKKKMMMMM+LPSLFKS G+  +DKS +PWPSCRQPRTLSFR TTAA AAAA T+
Sbjct: 1   MLTKKKKKKMMMMMKLPSLFKSSGLHHNDKSAWPWPSCRQPRTLSFRTTTAAAAAAAATE 60

Query: 61  SSDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDD--- 120
           SSDSFFTLSSESSGSLST SECSGGDPIERMIR LRS +RL FEP GKS SI++++    
Sbjct: 61  SSDSFFTLSSESSGSLSTASECSGGDPIERMIRGLRSTERLLFEPAGKSRSILKEEKKKA 120

Query: 121 -VSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHG 180
            V  PLKEGTTV+SMDSD+P+ DFRKSMEEMVEA+G++DW+SLEELLSWYL VNGK NHG
Sbjct: 121 AVPPPLKEGTTVVSMDSDNPFWDFRKSMEEMVEAYGLRDWKSLEELLSWYLSVNGKNNHG 180

Query: 181 FILGAFVDLLVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLPCVSSSMEIEEITSL--HE 236
           FILGAF+DLLVSLAMAA+ +++ SSS          SSS LPCVSSSMEIEEITSL  H 
Sbjct: 181 FILGAFLDLLVSLAMAAAAAAAASSS----------SSSFLPCVSSSMEIEEITSLDEHH 236

[Close]

BLAST of Clc10G18080 vs. ExPASy TrEMBL
Match: A0A1S3B6U9 (Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103486657 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.9e-79
Identity = 160/179 (89.39%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MLTKKKKMMMMMRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSDSF 60
           MLTKKKKMMMMMRLPSLFK L +DDKSTFPWPSCRQPRTLSFRTT+A A A  TDSS SF
Sbjct: 1   MLTKKKKMMMMMRLPSLFKILAIDDKSTFPWPSCRQPRTLSFRTTSA-AVATATDSSGSF 60

Query: 61  FTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDDVSAPLKEG 120
           FTLSSESSGSLST SE SGGDPIERMIRDLRS KRL FEPTGKSSSIVE + VS PLKEG
Sbjct: 61  FTLSSESSGSLSTVSESSGGDPIERMIRDLRSTKRLHFEPTGKSSSIVEDETVSHPLKEG 120

Query: 121 TTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVD 180
           TTVMSMDS+DPYSDFRKSMEEMVEAHGMKDWESLEELL+WYLRVNGKKNHGFILGAFVD
Sbjct: 121 TTVMSMDSNDPYSDFRKSMEEMVEAHGMKDWESLEELLNWYLRVNGKKNHGFILGAFVD 178

[Close]

BLAST of Clc10G18080 vs. ExPASy TrEMBL
Match: A0A6J1J6B8 (Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111481744 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.1e-77
Identity = 178/241 (73.86%), Postives = 201/241 (83.40%), Query Frame = 0


Query: 1   MLTKKKK--MMMMMRLPSLFKSLGV--DDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDS 60
           MLTKKKK  M+MMM+LPSLFKS G+  +DKS +PWPSCRQPRTLSFRTT   AAA  T+S
Sbjct: 1   MLTKKKKKMMVMMMKLPSLFKSSGLHHNDKSAWPWPSCRQPRTLSFRTT---AAATATES 60

Query: 61  SDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEKDD---- 120
           SDSFFTLSSESSGSLST SECSGGDPIERMIR LRS +RL FEP GKS SI++++     
Sbjct: 61  SDSFFTLSSESSGSLSTVSECSGGDPIERMIRGLRSTERLLFEPAGKSRSILKEEKKKAA 120

Query: 121 VSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHGMKDWESLEELLSWYLRVNGKKNHGF 180
           V  PLKEGTTV+SMDSDDP+ DFRKSMEEMVEA+G++DW+SLEELLSWYL VNGK NHGF
Sbjct: 121 VPPPLKEGTTVVSMDSDDPFWDFRKSMEEMVEAYGLRDWKSLEELLSWYLSVNGKNNHGF 180

Query: 181 ILGAFVDLLVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLPCVSSSMEIEEITSLHERRH 234
           ILGAF+DLLVSLA+AA+ +++ SSS SSSSSSL      LPC SSSMEIEEITSL E  H
Sbjct: 181 ILGAFLDLLVSLAVAAA-AAAASSSISSSSSSL------LPCASSSMEIEEITSLDEHHH 231

[Close]

BLAST of Clc10G18080 vs. TAIR 10
Match: AT2G36050.1 (ovate family protein 15 )

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-22
Identity = 98/268 (36.57%), Postives = 135/268 (50.37%), Query Frame = 0


Query: 12  MRLPSLFKSLGV------DDKSTFPWPSCRQ-PRTLSFRTTAAVAAAATTDSSDSFFTLS 71
           M+LP L K+            S++PWPSC Q P+TLSFR T            D    L 
Sbjct: 1   MKLPFLNKNHSTSSYSSNSSSSSWPWPSCNQNPKTLSFRATITFTNPIHDQDDDELDLLD 60

Query: 72  SESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEK---DDVSAPLKEGT 131
                           D +E +I+ LRS++RL FE  G+++SI+E+          +EG 
Sbjct: 61  PPEI-----------TDSVENVIKGLRSSERLIFESKGETNSILEEATSKREEEDEEEGF 120

Query: 132 TVMSMDSDDPYSDFRKSMEEMVEAHGM-KDWESLEELLSWYLRVNGKKNHGFILGAFVDL 191
            + S++SDDPYSDF++SMEEMVEAH +  DW+SLE+LL  +L+VN K +H +I  AFVDL
Sbjct: 121 MLFSLESDDPYSDFKRSMEEMVEAHALHHDWKSLEKLLLQFLKVNAKTSHRYIFAAFVDL 180

Query: 192 LVSLAM------------------------AASCSSSCS----------------SSCSS 226
           L++LA+                        A   S+SC                 +SCSS
Sbjct: 181 LMNLALDTKKAIINNDISKDDGVSASRAAAAGEASTSCCNSMTLGESPSSPLSFYTSCSS 240

[Close]

BLAST of Clc10G18080 vs. TAIR 10
Match: AT5G04820.1 (ovate family protein 13 )

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-22
Identity = 90/258 (34.88%), Postives = 136/258 (52.71%), Query Frame = 0


Query: 12  MRLPSLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATT----------------- 71
           M+L SLFK            P C   +TLSFR    +     +                 
Sbjct: 6   MKLSSLFKG---GAGGLLAVPLCYNAKTLSFRVGDDMIKTVNSVFFDHHHNNNNGGDLLE 65

Query: 72  -DSSDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLRSAKRLRFEPTGKSSSIVEK--- 131
            ++ +S+FT SSE++   + + +    + +E ++R +  ++RL F+P G +SSI+E+   
Sbjct: 66  AETPESWFTNSSETASHSTESDQDLDAESLEMVVRGVVRSERLFFDP-GVTSSILEEIEE 125

Query: 132 ---------------DDVSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHG--MKDWES 191
                          +D S P++E +  ++M+S+DPY DFR+SMEEMV +HG   KDWES
Sbjct: 126 KSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRSMEEMVTSHGELAKDWES 185

Query: 192 LEELLSWYLRVNGKKNHGFILGAFVDLLVSLAMAASCSSSCSSSCSSSSSSLCYSSSSLP 232
           LE +L+WYLR+NG+K+HG I+ AFVDLL  L+ + +  +S S S S+  S+   S  S P
Sbjct: 186 LESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASVSDSARYSTAVSSLPSSP 245

[Close]

BLAST of Clc10G18080 vs. TAIR 10
Match: AT3G52540.1 (ovate family protein 18 )

HSP 1 Score: 92.0 bits (227), Expect = 6.7e-19
Identity = 93/258 (36.05%), Postives = 134/258 (51.94%), Query Frame = 0


Query: 8   MMMMMRLP--------SLFKSLGVDDKSTFPWPSCRQPRTLSFRTTAAVAAAATTDSSD- 67
           M+  M+LP        S F S      S++PWPS  Q    +  + A+       D  + 
Sbjct: 1   MVRKMKLPFLNKNTSSSSFSSNSSSSSSSWPWPSSHQQNLKTISSKASFIVNKPKDVYEP 60

Query: 68  -----SFFTLSSESS-GSLSTTSECSGGDP----IERMIRDLRSAKRLRFEPTGKSSSIV 127
                SF +  S SS  S S+TS      P    IE +I+ L+S+KRL FE  G S+SI+
Sbjct: 61  EPPPRSFSSSPSSSSYSSFSSTSHAIENPPEIESIENVIKGLKSSKRLIFERRGTSNSIL 120

Query: 128 E---KDDVSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAHGM-KDWESLEELLSWYLRV 187
           E   K D     ++G  ++S++S+DPY+DF+ SME+MVE H +  DW SLE+LL W+L+V
Sbjct: 121 EEATKRDDHEEEEDGLMLLSLESNDPYTDFKNSMEKMVEVHVLHHDWISLEKLLFWFLKV 180

Query: 188 NGKKNHGFILGAFVDLLVSLAMAASCSSS--------CSSSCSSSSSSLCYSSSSLPCVS 235
           N K +H +I  AFVDL+++LA+  S   +           S SSS     YSSS     S
Sbjct: 181 NVKASHRYIFAAFVDLVLNLAVGPSKDVAGEPNSDVVVEDSLSSSWPVSLYSSSD-ENSS 240

[Close]

BLAST of Clc10G18080 vs. TAIR 10
Match: AT1G79960.1 (ovate family protein 14 )

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-10
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 92  SAKRLRFEPTGKSSSIVEKDDVSAPLKEGTTVMSMDSDDPYSDFRKSMEEMVEAH-GMK- 151
           S  R   E T  SS    +  +  P  E    +   +D+P  DFR+SM EM+E+  GM+ 
Sbjct: 165 SEGRPSMETTSTSSERQSRSTLVLP--ENCIAVLRYTDEPQEDFRQSMVEMMESKLGMRE 224

Query: 152 ---DWESLEELLSWYLRVNGKKNHGFILGAFVDLLVSL 185
              DW+ +EELL  YL +N KK+H FIL AFVDL+++L
Sbjct: 225 SEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIAL 260

[Close]

BLAST of Clc10G18080 vs. TAIR 10
Match: AT1G05420.1 (ovate family protein 12 )

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 38  RTLSFRTTAAVAAAATTDSSDSFFTLSSESSGSLSTTSECSGGDPIERMIRDLR---SAK 97
           R LS      V  ++T  +S S    SS SS S   +         +    DL    +++
Sbjct: 55  RRLSKPLIHDVEPSSTFTASTSTAANSSSSSASYDDSDNYGFAPDDDSPPPDLTAVLASR 114

Query: 98  RLRFEPTGKSSSIVEKDDV---------SAPLKEGTTVMS-MDSDDPYSDFRKSMEEMVE 157
           R  F   G S+SI +  D+         +  L  GT V   + S DPY+DFR+SM+EM++
Sbjct: 115 RFFFSSPGCSNSITDSPDLRCRDNYDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMID 174

Query: 158 ----AHGMKDWESLEELLSWYLRVNGKKNHGFILGAFVDLLVSL 185
               A  ++ +E L ELL  YL +N    H FI+ AF D+LVSL
Sbjct: 175 AVTNAGDLRRYEFLHELLLSYLSLNAADTHKFIIRAFADILVSL 218

The following BLAST results are available for this feature:

BLAST of Clc10G18080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905324.1	1.8e-98	88.75	transcription repressor OFP15-like [Benincasa hispida]	[more]
XP_004136703.2	8.3e-96	87.39	transcription repressor OFP15 [Cucumis sativus] >KGN59180.1 hypothetical protein...	[more]
KAA0043836.1	4.5e-94	85.17	transcription repressor OFP15-like [Cucumis melo var. makuwa] >TYK25297.1 transc...	[more]
XP_022935216.1	2.4e-79	73.58	transcription repressor OFP15-like [Cucurbita moschata]	[more]
XP_023528403.1	3.2e-79	75.00	transcription repressor OFP15-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc10G18080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ45	2.4e-21	36.57	Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1	[more]
Q9FMC8	5.3e-21	34.88	Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1	[more]
Q9SVD5	9.4e-18	36.05	Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1	[more]
Q9S7T5	4.7e-09	41.84	Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1	[more]
F4I8R6	7.5e-07	33.54	Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1	[more]

BLAST of Clc10G18080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB05	4.0e-96	87.39	Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_3G778360 PE=4 SV=1	[more]
A0A5A7TP27	2.2e-94	85.17	Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1F3Y1	1.2e-79	73.58	Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111442166 PE=4 SV=1	[more]
A0A1S3B6U9	9.9e-79	89.39	Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103486657 PE=4 SV=1	[more]
A0A6J1J6B8	1.1e-77	73.86	Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111481744 PE=4 SV=1	[more]

BLAST of Clc10G18080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36050.1	1.7e-22	36.57	ovate family protein 15	[more]
AT5G04820.1	3.8e-22	34.88	ovate family protein 13	[more]
AT3G52540.1	6.7e-19	36.05	ovate family protein 18	[more]
AT1G79960.1	3.3e-10	41.84	ovate family protein 14	[more]
AT1G05420.1	5.3e-08	33.54	ovate family protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006458	Ovate protein family, C-terminal	TIGRFAM	TIGR01568	TIGR01568	coord: 124..185 e-value: 2.8E-27 score: 92.9
IPR006458	Ovate protein family, C-terminal	PFAM	PF04844	Ovate	coord: 128..184 e-value: 8.5E-27 score: 92.9
IPR006458	Ovate protein family, C-terminal	PROSITE	PS51754	OVATE	coord: 124..183 score: 18.306007
None	No IPR available	PANTHER	PTHR33057:SF98	OVATE TRANSCRIPTIONAL REPRESSOR	coord: 12..221
IPR038933	Ovate protein family	PANTHER	PTHR33057	TRANSCRIPTION REPRESSOR OFP7-RELATED	coord: 12..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G18080.1	Clc10G18080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus