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Clc10G18030 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAATTATCATTTTACCCTTTGTCTTCTATATCACCAGAACTGTGGAAAATGGGATATTCCCAGAGATTGCCCTCAGGCTCAAGTGTGTGGAGGTGAAGCTTAAAGTAATCCAGCGCTTCCTTCTCTTTACTTCGCTTATCCATTTCTCCGCCTTAGCCTCACTTTGTGCTGCCCATTTCCCCCTTCTTCCTCCTCCCGCATGGCTTGCTCCGCCGCCTCCACCGCCTCCACCGCCCTTCTCTCCTCCAATCCTTCCTCCTTTCCCGCCAAGTCCAGTGCTCCCATTGCTTCCGCCCCCTTCTCCCGAACCCTAGCTCTTCCCAAATCTTTCGTCGGTCTTCGCAAATCCTTCCAGCCTTCAGCTCCTCGTTCATTCTCCTCCCCCCGTGGAGCTCGCTCCAGACGCAGCTTTGCTGTCCGGGCTTCTGTAAGTGATGCCTCCCCCTCTCACTTTGTTTTCCCCGCTTGACTCTTTCTTGTGAAGTTTGAAGTTCGAAGTTTGAAGTTTGAAGTTCCTGATGTGTGTTTTGGTTTTCTTTTTGTTTCTTGTTTGGTCTGATGCGATGGTGATTTGTGTTTTGGTTTTCTTTTTGCTTCTTGTTTGGTCTGGTGCGATGGATTGTTTTGACTAATTATGTAAGCACCGGTCCAGATTATCTTTCCTACAGAAAATTATCAATTGACCATTTGCATTTTAGTATTGACTGACGAGGTACAGTTTGCCTTTTTGTACTTTGATTTCATTATGACAAAATTTTGGAAATCGAACTTATTCCCATTGTCATTCCCCTCGAAATGTTGCCTTTTCAAAGAAACTTTTCTCAGAAGTTCTTCTCTGTCTTCATTATGTTATTTTAGTTTCTTTCACCTTTTGAAATTATTGCTGCAGTCATGTGAGGTTCGAGATTGAGATGACTTTTGGACAGATGAAAAGTCTGTTCAAGTAATTAGAATATTCATGGTGTTTGGCTATGTTAAATGATTATTTTCTTTAAAAAATCTTCAACACTTGAACGCATTTTAAGGTGCTTTCGGAGTACTTTAGTTGGTATGTTCCGTAGAAAGTGTTTGTGGGAATCACATAAAAACAATACTTGTAAAAGTTACTCTAAACTCATCCGTAGTTACTTTAAGACTCATTTATATTATGCTTAAATTACACTGATATTTTGATATTCTACATTTTAAGTGTTGACTTATTGCAACTCGTGATGCAAGGCAGAAATCAGCATCTTTAAACTCAAAATATGACCATGTGAAATATTTACTTTGAGGGTTCCACTTCTTACTTTGTGATTCATTATTTATTTTTACAGAGTGAACTTCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCAGAGGCAGTTTTTGATCAGGAATTTATCAAGGTAATTCTCAATGGCTAAAGAATTTTCCCATTGGTTACAGTACTTTTAAATCTGGAATATTTGGCCTCCTGATATTTATTTGACACTATCCTAATAGTTCTATGTTTACTGGCCAGCTTGCATTTTCTTGTTATTATATCTTAAGTCTTACTATCTCAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGACTTTACGTTTGTTTGTCCCACAGGTTTGTTGCACTAAACTACCCCAAATGGAAGTTCGGAAAATATTGTTTTTAACTGCTTTGAACCAAAGTTTCTTTTATCTCCTGTTTTGTAGAAATTACTGCTTTCAGTGACCGGTATGAAGAATTTAAGCAGCTAAACACAGAAGTTTTGGGTGTTTCAATTGACAGTGTTGTAAGTAGCTACTTTCTTCTCTTGTTCAACAGGAATATATTTTTGAAATGAAGTTTTATCTTGGTGGAATTCGGCTTCTATTTCTTAAAATGAGATAATTAATTTCAGTGGTGAAATGTGATCGCTAGTATCCTATTTGCAGTTCTCACATCTTGCGTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAGTATCCACTGGTTTCTGATGTTACTAAATCAATTTCAAAATCTTATGGTGTGCTGATCCCAGACCAGGTATGAGAATATCCTAATATTTTGCTTTGTGAAGCCTCTAGAATTCAAAACTGTAAGATCATTGGTTCAGTGTTTATGCCCATACTTATATCTTACCTATTAGTAATACTTTTAGCATGACCACGTGTCTATTCTTATTATAAAGTCATTTTCCCTCTCAATTACAAAGCACAAGCAGCACCTGACATTTCGTTGATAAAAGTGCACTAAGTGCAAAAAACTTCGTTTGCCGATGGACCATACTGACAGAACAATTTGTATCAATTTAGACCTCTGTCAAAAAGTCCTTGTTCTAAATTCTACCAAGCAGCATGATGATGAACTCTTGTGAATAAAAAACTGAAAAGTGAGTGGTATAAGAGGCCAAGCTCTTGGTGAGGTTCTTGAAACAATATCCATTGCGATAATTTTTCACAGCTTTTGTATCAACCAAGAGGATTTGGTTTTGTTGTCAAATGCCTAGTTTCTGGTTCATTTTGAATTTAGTTACATAAAAATGGTTAGAAAGTCTTCCTCAGTTAGAAAATTGCTAAGCCATTAGTTTATATGAATAATCAATTTTGTATGCATCATTTGACTTCACCTCTGCAATAGTAGAAGTGACATCGTTGTAATTGCTTAGCTGACCTCTGTCTGACAACATTTTAATGAACAGGGAATTGCATTGAGAGGCCTTTTCATTATTGACAAAGAAGGAGTTATCCAACACTCAACAATAAACAATCTTGCTATTGGCCGGAGTGTTGACGAGACGAAGAGAACTCTCCAAGTAATTGAATCAGCTAACACCTTTCTTCTCGAATTCACTTGTTTAGTCATTAGGAGTTTAGGACTTGAACTTGCAACCAAATAGTTGGACTGAAATTCAGTCCATCCTGTAGGCCAATGATTGTTTTTTTACGTTTGAGTGATAATCAAGGGTTCTTGATCTTCTCTTTGATGTTCTTGCAGGCCTTACAATACGTGCAGGAGAACCCCGACGAAGTCTGCCCTGCTGGATGGAAACCCGGGGAGAAGTCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCAGCTGTTGCCTAATATGTGTGAGATGGTCTAAGAAGTCAAAGTCTGATGCAATACCATTGCCATTTTAGTTGTTTAAATTTTGGTTTGCCGCTTGTGGAACAAATTGGTTAACGAGGCTCGATTATGTCATTGGATATAGAGTGTTCAATTTCACATCTCTAGATGAATGAAGCAGCAATAAACATAGGGTTTCGGCAATAGTTTGTTTTGTAGAAGTATTATCCATGGTTTGCTATGTCATCAATGGTTTCTTCCGCCCTCTCTTGACTAGTGTCTAGATCTGTCGATGAACTTTAAATTACTCGATCAATCTGAAACCAACTGTATCGTCAATTTTACTGATTCTTGGATTAGTTCTGCGTGATTCTCATGAATCTAACTGAATTCAGTTTTCGTTATGGACTAACCTGTGAATATTAATGTAATCATGATACTACTATTATTATTATTTTACATCACATGATGTGGAGAATCTAATTTCTAACCATGTAGTTGATAATACAAGTTTTATATCAGTTGAATTAGATTTGTATTGAAGTGAGTGAAGTGAATACCATCTTAGATCTGTTTCCTCCCAAATTCCAAACGAATAATTAAAATTGATGTTAATTATGGGGT CGAATTATCATTTTACCCTTTGTCTTCTATATCACCAGAACTGTGGAAAATGGGATATTCCCAGAGATTGCCCTCAGGCTCAAGTGTGTGGAGGTGAAGCTTAAAGTAATCCAGCGCTTCCTTCTCTTTACTTCGCTTATCCATTTCTCCGCCTTAGCCTCACTTTGTGCTGCCCATTTCCCCCTTCTTCCTCCTCCCGCATGGCTTGCTCCGCCGCCTCCACCGCCTCCACCGCCCTTCTCTCCTCCAATCCTTCCTCCTTTCCCGCCAAGTCCAGTGCTCCCATTGCTTCCGCCCCCTTCTCCCGAACCCTAGCTCTTCCCAAATCTTTCGTCGGTCTTCGCAAATCCTTCCAGCCTTCAGCTCCTCGTTCATTCTCCTCCCCCCGTGGAGCTCGCTCCAGACGCAGCTTTGCTGTCCGGGCTTCTAGTGAACTTCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCAGAGGCAGTTTTTGATCAGGAATTTATCAAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGACTTTACGTTTGTTTGTCCCACAGAAATTACTGCTTTCAGTGACCGGTATGAAGAATTTAAGCAGCTAAACACAGAAGTTTTGGGTGTTTCAATTGACAGTGTTTTCTCACATCTTGCGTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAGTATCCACTGGTTTCTGATGTTACTAAATCAATTTCAAAATCTTATGGTGTGCTGATCCCAGACCAGGGAATTGCATTGAGAGGCCTTTTCATTATTGACAAAGAAGGAGTTATCCAACACTCAACAATAAACAATCTTGCTATTGGCCGGAGTGTTGACGAGACGAAGAGAACTCTCCAAGCCTTACAATACGTGCAGGAGAACCCCGACGAAGTCTGCCCTGCTGGATGGAAACCCGGGGAGAAGTCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCAGCTGTTGCCTAATATGTGTGAGATGGTCTAAGAAGTCAAAGTCTGATGCAATACCATTGCCATTTTAGTTGTTTAAATTTTGGTTTGCCGCTTGTGGAACAAATTGGTTAACGAGGCTCGATTATGTCATTGGATATAGAGTGTTCAATTTCACATCTCTAGATGAATGAAGCAGCAATAAACATAGGGTTTCGGCAATAGTTTGTTTTGTAGAAGTATTATCCATGGTTTGCTATGTCATCAATGGTTTCTTCCGCCCTCTCTTGACTAGTGTCTAGATCTGTCGATGAACTTTAAATTACTCGATCAATCTGAAACCAACTGTATCGTCAATTTTACTGATTCTTGGATTAGTTCTGCGTGATTCTCATGAATCTAACTGAATTCAGTTTTCGTTATGGACTAACCTGTGAATATTAATGTAATCATGATACTACTATTATTATTATTTTACATCACATGATGTGGAGAATCTAATTTCTAACCATGTAGTTGATAATACAAGTTTTATATCAGTTGAATTAGATTTGTATTGAAGTGAGTGAAGTGAATACCATCTTAGATCTGTTTCCTCCCAAATTCCAAACGAATAATTAAAATTGATGTTAATTATGGGGT ATGGCTTGCTCCGCCGCCTCCACCGCCTCCACCGCCCTTCTCTCCTCCAATCCTTCCTCCTTTCCCGCCAAGTCCAGTGCTCCCATTGCTTCCGCCCCCTTCTCCCGAACCCTAGCTCTTCCCAAATCTTTCGTCGGTCTTCGCAAATCCTTCCAGCCTTCAGCTCCTCGTTCATTCTCCTCCCCCCGTGGAGCTCGCTCCAGACGCAGCTTTGCTGTCCGGGCTTCTAGTGAACTTCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCAGAGGCAGTTTTTGATCAGGAATTTATCAAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGACTTTACGTTTGTTTGTCCCACAGAAATTACTGCTTTCAGTGACCGGTATGAAGAATTTAAGCAGCTAAACACAGAAGTTTTGGGTGTTTCAATTGACAGTGTTTTCTCACATCTTGCGTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAGTATCCACTGGTTTCTGATGTTACTAAATCAATTTCAAAATCTTATGGTGTGCTGATCCCAGACCAGGGAATTGCATTGAGAGGCCTTTTCATTATTGACAAAGAAGGAGTTATCCAACACTCAACAATAAACAATCTTGCTATTGGCCGGAGTGTTGACGAGACGAAGAGAACTCTCCAAGCCTTACAATACGTGCAGGAGAACCCCGACGAAGTCTGCCCTGCTGGATGGAAACCCGGGGAGAAGTCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCAGCTGTTGCCTAA MACSAASTASTALLSSNPSSFPAKSSAPIASAPFSRTLALPKSFVGLRKSFQPSAPRSFSSPRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFKQLNTEVLGVSIDSVFSHLAWVQTDRKSGGLGDLQYPLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKGSKEYFSAVA Homology
BLAST of Clc10G18030 vs. NCBI nr
Match: XP_038903950.1 (2-Cys peroxiredoxin BAS1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 503.8 bits (1296), Expect = 9.2e-139 Identity = 263/274 (95.99%), Postives = 265/274 (96.72%), Query Frame = 0
BLAST of Clc10G18030 vs. NCBI nr
Match: XP_022983071.1 (2-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-138 Identity = 258/274 (94.16%), Postives = 268/274 (97.81%), Query Frame = 0
BLAST of Clc10G18030 vs. NCBI nr
Match: XP_022940528.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita moschata]) HSP 1 Score: 502.7 bits (1293), Expect = 2.0e-138 Identity = 258/274 (94.16%), Postives = 265/274 (96.72%), Query Frame = 0
BLAST of Clc10G18030 vs. NCBI nr
Match: XP_022934750.1 (2-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 500.4 bits (1287), Expect = 1.0e-137 Identity = 257/274 (93.80%), Postives = 267/274 (97.45%), Query Frame = 0
BLAST of Clc10G18030 vs. NCBI nr
Match: XP_004136505.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucumis sativus] >KGN59185.1 hypothetical protein Csa_002620 [Cucumis sativus]) HSP 1 Score: 499.2 bits (1284), Expect = 2.3e-137 Identity = 261/276 (94.57%), Postives = 267/276 (96.74%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy Swiss-Prot
Match: Q96291 (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAS1 PE=1 SV=2) HSP 1 Score: 397.1 bits (1019), Expect = 1.6e-109 Identity = 215/271 (79.34%), Postives = 232/271 (85.61%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy Swiss-Prot
Match: Q9C5R8 (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g06290 PE=2 SV=3) HSP 1 Score: 389.8 bits (1000), Expect = 2.5e-107 Identity = 213/272 (78.31%), Postives = 233/272 (85.66%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy Swiss-Prot
Match: O24364 (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea OX=3562 GN=BAS1 PE=2 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 3.7e-106 Identity = 215/276 (77.90%), Postives = 231/276 (83.70%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy Swiss-Prot
Match: Q6ER94 (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAS1 PE=1 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.2e-102 Identity = 201/272 (73.90%), Postives = 222/272 (81.62%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy Swiss-Prot
Match: Q96468 (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=BAS1 PE=2 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 3.0e-100 Identity = 181/207 (87.44%), Postives = 197/207 (95.17%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy TrEMBL
Match: A0A6J1J132 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111481726 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 5.8e-139 Identity = 258/274 (94.16%), Postives = 268/274 (97.81%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy TrEMBL
Match: A0A6J1FPJ7 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111446096 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.9e-139 Identity = 258/274 (94.16%), Postives = 265/274 (96.72%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy TrEMBL
Match: A0A6J1F8M0 (Thioredoxin-dependent peroxiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111441835 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 4.9e-138 Identity = 257/274 (93.80%), Postives = 267/274 (97.45%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy TrEMBL
Match: A0A0A0LB09 (Thioredoxin-dependent peroxiredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G778410 PE=4 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137 Identity = 261/276 (94.57%), Postives = 267/276 (96.74%), Query Frame = 0
BLAST of Clc10G18030 vs. ExPASy TrEMBL
Match: A0A1S3B6V4 (Thioredoxin-dependent peroxiredoxin OS=Cucumis melo OX=3656 GN=LOC103486662 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 1.9e-137 Identity = 261/277 (94.22%), Postives = 267/277 (96.39%), Query Frame = 0
BLAST of Clc10G18030 vs. TAIR 10
Match: AT3G11630.1 (Thioredoxin superfamily protein ) HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-110 Identity = 215/271 (79.34%), Postives = 232/271 (85.61%), Query Frame = 0
BLAST of Clc10G18030 vs. TAIR 10
Match: AT5G06290.1 (2-cysteine peroxiredoxin B ) HSP 1 Score: 389.8 bits (1000), Expect = 1.8e-108 Identity = 213/272 (78.31%), Postives = 233/272 (85.66%), Query Frame = 0
BLAST of Clc10G18030 vs. TAIR 10
Match: AT3G26060.1 (Thioredoxin superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14 Identity = 69/232 (29.74%), Postives = 107/232 (46.12%), Query Frame = 0
BLAST of Clc10G18030 vs. TAIR 10
Match: AT3G26060.2 (Thioredoxin superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14 Identity = 71/234 (30.34%), Postives = 109/234 (46.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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