Clc10G17220 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G17220
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box/kelch-repeat protein
Location	ClcChr10: 31135495 .. 31136707 (+)
RNA-Seq Expression	Clc10G17220
Synteny	Clc10G17220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAATCCTTTTTCTCTCTATAAATACCCCAAAAGGAATGATATCATAAAAATCAAAACAGAGTGTTAGAAGAATCAATTGTGGAAATGGCAGAAGAATTGATTCCCGGTTTGCCCGAAGAAATAGCCCTTCAGTGCTTAACTCGCTCCCATTTCACAACTCACCGAGTCGCCGCCCGAGTTTCTCGCCGGTGGCGCCACCTATTTCTCAGCCGCGATTTCTATAATCTCAGAAAACTTTCTGGCCGAACCCACAAGGCGGTGTTCGCCGTCCAGTCACTTCCTGCGCCGGTTAGCGACGGAGCCAAATCCGCCGTTCCGGTCGCGTTTGGTGTATCGGCCTTAGATCCGGCTACTGGAAATTGGACTCGGATCAAACCCATCAAAAAGTACCCAAACGGGCTGCCGCTGTTCTGCCGGCTGATCGGCGTCGATGGGAAATTGGTGATGATCGGCGGGTGGGATCCGGCGAGTTACCGGCCAGTGCAGGATGTGTTCGTGTACGAATTTGCGGCGGAGAAGTGGAGGCAAGGAAAGGGGATGCCGGAGAAGAGGTCCTTTTTCGGCGCGGCAGAGTGTGGAGGCGAAATTTTCGTAACCGGCGGGCACGACGAGGGGAAGAACGCGGCAGCGACGGCGTGGGCTTATAATATTAGAAATGACGAATGGAGGGAGTTGCCGGCGATGAGTGGCGGAAGAGACGAGTGCGAGGCTGTGGCGATTGGATCGGAGATATGGGTGGTGAGCGGATATGGGACTGAAAACCAGGGGAATTTCGAAACAACGGCGGAGGTTTTTGACACAAAGACGGGGAAGTGGCGGCGCGTGGACAGCGCGTGGTGTGGGGACATAAGTCCAAGAAGCGTGGTAGGAGTGGGGAGAGAAGGGGAATTGTACAGCTGGGCAGCGGTAGCGGCGGCGGCGACGACGACGGGAGTGACGGCGGAGGGAATTGTCGGAGTGAATATGGTGGATAAGGCAATAGTGTTCATGGGGAAGAGTGGAATTTTCATGGGGGAAGGGCAAAATGGTAAATTCGAGAGAATGGAAGTACCTGAGGAATTTTCGGGGTTCGTCCAATCGGCTTGTTACACCGAGATTTGAACTATCTCCTGCCTTCTCCAAATAATCTTTCATTCTTTTCTTCTTCTTTTTTTCTTTTTTCCTCTTTTTTGTATATTTCGTAGTAGTAAATTGTAGTATTATTTATTAC

mRNA sequence

CTTGAATCCTTTTTCTCTCTATAAATACCCCAAAAGGAATGATATCATAAAAATCAAAACAGAGTGTTAGAAGAATCAATTGTGGAAATGGCAGAAGAATTGATTCCCGGTTTGCCCGAAGAAATAGCCCTTCAGTGCTTAACTCGCTCCCATTTCACAACTCACCGAGTCGCCGCCCGAGTTTCTCGCCGGTGGCGCCACCTATTTCTCAGCCGCGATTTCTATAATCTCAGAAAACTTTCTGGCCGAACCCACAAGGCGGTGTTCGCCGTCCAGTCACTTCCTGCGCCGGTTAGCGACGGAGCCAAATCCGCCGTTCCGGTCGCGTTTGGTGTATCGGCCTTAGATCCGGCTACTGGAAATTGGACTCGGATCAAACCCATCAAAAAGTACCCAAACGGGCTGCCGCTGTTCTGCCGGCTGATCGGCGTCGATGGGAAATTGGTGATGATCGGCGGGTGGGATCCGGCGAGTTACCGGCCAGTGCAGGATGTGTTCGTGTACGAATTTGCGGCGGAGAAGTGGAGGCAAGGAAAGGGGATGCCGGAGAAGAGGTCCTTTTTCGGCGCGGCAGAGTGTGGAGGCGAAATTTTCGTAACCGGCGGGCACGACGAGGGGAAGAACGCGGCAGCGACGGCGTGGGCTTATAATATTAGAAATGACGAATGGAGGGAGTTGCCGGCGATGAGTGGCGGAAGAGACGAGTGCGAGGCTGTGGCGATTGGATCGGAGATATGGGTGGTGAGCGGATATGGGACTGAAAACCAGGGGAATTTCGAAACAACGGCGGAGGTTTTTGACACAAAGACGGGGAAGTGGCGGCGCGTGGACAGCGCGTGGTGTGGGGACATAAGTCCAAGAAGCGTGGTAGGAGTGGGGAGAGAAGGGGAATTGTACAGCTGGGCAGCGGTAGCGGCGGCGGCGACGACGACGGGAGTGACGGCGGAGGGAATTGTCGGAGTGAATATGGTGGATAAGGCAATAGTGTTCATGGGGAAGAGTGGAATTTTCATGGGGGAAGGGCAAAATGGTAAATTCGAGAGAATGGAAGTACCTGAGGAATTTTCGGGGTTCGTCCAATCGGCTTGTTACACCGAGATTTGAACTATCTCCTGCCTTCTCCAAATAATCTTTCATTCTTTTCTTCTTCTTTTTTTCTTTTTTCCTCTTTTTTGTATATTTCGTAGTAGTAAATTGTAGTATTATTTATTAC

Coding sequence (CDS)

ATGGCAGAAGAATTGATTCCCGGTTTGCCCGAAGAAATAGCCCTTCAGTGCTTAACTCGCTCCCATTTCACAACTCACCGAGTCGCCGCCCGAGTTTCTCGCCGGTGGCGCCACCTATTTCTCAGCCGCGATTTCTATAATCTCAGAAAACTTTCTGGCCGAACCCACAAGGCGGTGTTCGCCGTCCAGTCACTTCCTGCGCCGGTTAGCGACGGAGCCAAATCCGCCGTTCCGGTCGCGTTTGGTGTATCGGCCTTAGATCCGGCTACTGGAAATTGGACTCGGATCAAACCCATCAAAAAGTACCCAAACGGGCTGCCGCTGTTCTGCCGGCTGATCGGCGTCGATGGGAAATTGGTGATGATCGGCGGGTGGGATCCGGCGAGTTACCGGCCAGTGCAGGATGTGTTCGTGTACGAATTTGCGGCGGAGAAGTGGAGGCAAGGAAAGGGGATGCCGGAGAAGAGGTCCTTTTTCGGCGCGGCAGAGTGTGGAGGCGAAATTTTCGTAACCGGCGGGCACGACGAGGGGAAGAACGCGGCAGCGACGGCGTGGGCTTATAATATTAGAAATGACGAATGGAGGGAGTTGCCGGCGATGAGTGGCGGAAGAGACGAGTGCGAGGCTGTGGCGATTGGATCGGAGATATGGGTGGTGAGCGGATATGGGACTGAAAACCAGGGGAATTTCGAAACAACGGCGGAGGTTTTTGACACAAAGACGGGGAAGTGGCGGCGCGTGGACAGCGCGTGGTGTGGGGACATAAGTCCAAGAAGCGTGGTAGGAGTGGGGAGAGAAGGGGAATTGTACAGCTGGGCAGCGGTAGCGGCGGCGGCGACGACGACGGGAGTGACGGCGGAGGGAATTGTCGGAGTGAATATGGTGGATAAGGCAATAGTGTTCATGGGGAAGAGTGGAATTTTCATGGGGGAAGGGCAAAATGGTAAATTCGAGAGAATGGAAGTACCTGAGGAATTTTCGGGGTTCGTCCAATCGGCTTGTTACACCGAGATTTGA

Protein sequence

MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLVMIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNAAATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTKTGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIVFMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI

Homology

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BLAST of Clc10G17220 vs. NCBI nr
Match: XP_038904459.1 (F-box/kelch-repeat protein At2g44130-like [Benincasa hispida])

HSP 1 Score: 641.3 bits (1653), Expect = 4.5e-180
Identity = 310/338 (91.72%), Postives = 325/338 (96.15%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           MAEELIPGLPEEIAL+CLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF
Sbjct: 1   MAEELIPGLPEEIALECLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSLPAPVSDGAKSAVPVAFGVSA DPATGNWTRIKPI+KYPNGLPLFCRLIGVDGKLV
Sbjct: 61  AVQSLPAPVSDGAKSAVPVAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRLIGVDGKLV 120

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDPAS+RPV+DVFVYEFAAEKWRQGKGMPEKRSFFGAAE GGEIFV GGHDEGKNA
Sbjct: 121 VIGGWDPASFRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGAAEYGGEIFVAGGHDEGKNA 180

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           AATAWAYN+RNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTE QGNFETTAEVFDTK
Sbjct: 181 AATAWAYNVRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTEIQGNFETTAEVFDTK 240

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIV 300
           TG+WRRVDSAWCG+ SPR VVGVGREGEL+SWA V  AATTT VTAEGIVGVNM+DKA+V
Sbjct: 241 TGEWRRVDSAWCGERSPRGVVGVGREGELFSWAEV-MAATTTAVTAEGIVGVNMMDKAMV 300

Query: 301 FMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           F+G+ GIF  EGQNGKFE++EVPEEFSGFVQSACYTEI
Sbjct: 301 FVGRYGIFTAEGQNGKFEKIEVPEEFSGFVQSACYTEI 337

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BLAST of Clc10G17220 vs. NCBI nr
Match: XP_004136552.3 (F-box/kelch-repeat protein At2g44130 [Cucumis sativus])

HSP 1 Score: 601.3 bits (1549), Expect = 5.2e-168
Identity = 287/338 (84.91%), Postives = 309/338 (91.42%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           + +ELIPGLPEEIAL+CLTRSHFTTHRVAARVSRRW  LFLSR FYNLRKLSGRTHKAVF
Sbjct: 3   IGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVF 62

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSL  PVSD AKSA P+AFGVSA DPATGNWTRIKPI+KYPNGLPLFCR+IGVDGKL 
Sbjct: 63  AVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 122

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDP SYRPV+DVFVYEFAAEKWRQGKGMPEKRSFFGA E GGEIFV GGHDEGKNA
Sbjct: 123 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 182

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           AA+AW YNIRNDEWRELPAMS GRDECEAVAIGSEIWVVSGY TENQGNFE TAEV++TK
Sbjct: 183 AASAWVYNIRNDEWRELPAMSRGRDECEAVAIGSEIWVVSGYETENQGNFERTAEVYETK 242

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIV 300
           TGKWRRV+SAWC + SPR+VVGVGREGEL++WA  AAAA TT VT EGIVGVNM +KAIV
Sbjct: 243 TGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIVGVNMEEKAIV 302

Query: 301 FMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           FMG++G+FMGE QNGK ER+E+PEEFSGFVQSACYT I
Sbjct: 303 FMGRNGVFMGECQNGKLERIELPEEFSGFVQSACYTHI 340

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BLAST of Clc10G17220 vs. NCBI nr
Match: KGN59267.1 (hypothetical protein Csa_002357 [Cucumis sativus])

HSP 1 Score: 601.3 bits (1549), Expect = 5.2e-168
Identity = 287/338 (84.91%), Postives = 309/338 (91.42%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           + +ELIPGLPEEIAL+CLTRSHFTTHRVAARVSRRW  LFLSR FYNLRKLSGRTHKAVF
Sbjct: 11  IGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVF 70

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSL  PVSD AKSA P+AFGVSA DPATGNWTRIKPI+KYPNGLPLFCR+IGVDGKL 
Sbjct: 71  AVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 130

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDP SYRPV+DVFVYEFAAEKWRQGKGMPEKRSFFGA E GGEIFV GGHDEGKNA
Sbjct: 131 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 190

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           AA+AW YNIRNDEWRELPAMS GRDECEAVAIGSEIWVVSGY TENQGNFE TAEV++TK
Sbjct: 191 AASAWVYNIRNDEWRELPAMSRGRDECEAVAIGSEIWVVSGYETENQGNFERTAEVYETK 250

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIV 300
           TGKWRRV+SAWC + SPR+VVGVGREGEL++WA  AAAA TT VT EGIVGVNM +KAIV
Sbjct: 251 TGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIVGVNMEEKAIV 310

Query: 301 FMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           FMG++G+FMGE QNGK ER+E+PEEFSGFVQSACYT I
Sbjct: 311 FMGRNGVFMGECQNGKLERIELPEEFSGFVQSACYTHI 348

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BLAST of Clc10G17220 vs. NCBI nr
Match: XP_008443007.1 (PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis melo] >KAA0043760.1 F-box/kelch-repeat protein [Cucumis melo var. makuwa] >TYK25373.1 F-box/kelch-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 587.8 bits (1514), Expect = 6.0e-164
Identity = 283/339 (83.48%), Postives = 308/339 (90.86%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           MA+ELIPGLPEEIAL+CLTRSHFTTHR+AARVSRRWR LFLSR FYNLRKLSGRTHKAVF
Sbjct: 4   MADELIPGLPEEIALECLTRSHFTTHRLAARVSRRWRRLFLSRHFYNLRKLSGRTHKAVF 63

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSLP PVSD AKSA P+AFGVSA DPATGNWTRIKPI+KYPNGLPLFCR+IGVDGKL 
Sbjct: 64  AVQSLPLPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 123

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDP SYRPV+DVFVY+FAAEKWRQGKGMPEKRSFFGA E GGEIFV GGHDEGKNA
Sbjct: 124 VIGGWDPVSYRPVEDVFVYDFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 183

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           AATAW YNIRNDEWRELPAM  GRDECEAVAIGSEIWVVSGY TENQG+FE TAEV++TK
Sbjct: 184 AATAWVYNIRNDEWRELPAMGAGRDECEAVAIGSEIWVVSGYETENQGDFERTAEVYETK 243

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDK-AI 300
           TGKWRRV++AWC + SPR+VVGVGREGEL++WA V  AA TT V  EGIVGVNM +K A+
Sbjct: 244 TGKWRRVENAWCEERSPRNVVGVGREGELFNWATV--AAKTTAVEGEGIVGVNMEEKGAM 303

Query: 301 VFMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           VFMG++G+FMGEGQ GK ER+E+PEEFSGFVQSA YT I
Sbjct: 304 VFMGRNGVFMGEGQYGKLERIELPEEFSGFVQSASYTHI 340

[Close]

BLAST of Clc10G17220 vs. NCBI nr
Match: XP_022983021.1 (F-box/kelch-repeat protein At2g44130-like [Cucurbita maxima])

HSP 1 Score: 555.4 bits (1430), Expect = 3.3e-154
Identity = 269/338 (79.59%), Postives = 293/338 (86.69%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           MA+ELIPGLPEEIAL CL RSHFTTHR+AARV RRWR LFLSRDF+NLR++S RTHKAVF
Sbjct: 1   MAQELIPGLPEEIALDCLIRSHFTTHRIAARVCRRWRGLFLSRDFHNLRRISDRTHKAVF 60

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSL  P  DG KS  P+AFG+SA DPATG WT IKPI+KY NGLPLFCRLIGVDGKLV
Sbjct: 61  AVQSLLVPAGDGDKSTAPLAFGLSAFDPATGKWTWIKPIEKYSNGLPLFCRLIGVDGKLV 120

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDPASYRPV+DVFVY+ AAEKWRQGKGMP  RSFF A ECGGEIFV GGHDE KNA
Sbjct: 121 VIGGWDPASYRPVEDVFVYDMAAEKWRQGKGMPATRSFFSAVECGGEIFVAGGHDEWKNA 180

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           A+TAWAYNI+NDEWRELPAMS GRDECEAVAIGS+IWVVSGY TENQGNFE TAE+FDT+
Sbjct: 181 ASTAWAYNIKNDEWRELPAMSCGRDECEAVAIGSDIWVVSGYRTENQGNFEATAEIFDTE 240

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIV 300
           T KWRRVDSAW  + SPR VVGV REG L+SWA  AA A TT VTAE +VGVNM  KA+V
Sbjct: 241 TEKWRRVDSAWREERSPRGVVGVSREGGLFSWA--AAVAATTAVTAEEVVGVNMEGKAMV 300

Query: 301 FMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           F+G+ GIF  EGQN KFERMEVPE+F+GFVQSACYTEI
Sbjct: 301 FVGRHGIFTREGQNSKFERMEVPEDFTGFVQSACYTEI 336

[Close]

BLAST of Clc10G17220 vs. ExPASy Swiss-Prot
Match: O80582 (F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 5.1e-49
Identity = 109/280 (38.93%), Postives = 149/280 (53.21%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           ELIPGLP E+AL+CL R  F        V R WR L     F   R+  G+T   +  VQ
Sbjct: 18  ELIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERRRCGKTELLLCLVQ 77

Query: 64  SL--PAPVSDGAKSAVPV-----------------AFGVSALDPATGNWTRIKPIKKYPN 123
            L  P P S      + V                  FG+S  + A   W R+   ++   
Sbjct: 78  PLTPPIPASKSVDETLMVDEKKSEDESHPRVFCTPRFGLSVYNAAMSTWHRVAFPEE--E 137

Query: 124 GLPLFCRLIGVD--GKLVMIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAA 183
            +PLFC  + +   GK+++IGGWDP + +P +DV+V EFA  KWR+G  M E RSFF  A
Sbjct: 138 QIPLFCECVVLQDAGKILLIGGWDPETLQPTRDVYVLEFAGRKWRRGAPMKESRSFFACA 197

Query: 184 ECG-GEIFVTGGHDEGKNAAATAWAYNIRNDEWRELPAMSGGRDECE--AVAIGSEIWVV 243
                +++V GGHD+ KNA  +A  Y++  DEW  +  M+ GRDEC+  AV +G    V+
Sbjct: 198 SVSPTKVYVAGGHDDQKNALRSAEVYDVEKDEWSSVTPMTEGRDECQGFAVGMGLRFCVL 257

Query: 244 SGYGTENQGNFETTAEVFDTKTGKWRRVDSAW-CGDISPR 259
           SGYGTE+QG F +  E++D  T  W R+D+ W   D SPR
Sbjct: 258 SGYGTESQGRFRSDGEIYDPATDSWSRIDNVWRFPDTSPR 295

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BLAST of Clc10G17220 vs. ExPASy Swiss-Prot
Match: Q9LMR5 (F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-47
Identity = 120/358 (33.52%), Postives = 174/358 (48.60%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           ELIP LPE +A +CL RS +    + A V + W+      DF+  RK SG + + V   Q
Sbjct: 2   ELIPDLPETVAYECLLRSSYKQFPLMASVCKLWQREISLSDFFRHRKASGHSQELVVLSQ 61

Query: 64  SLPAPVSD---GAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 123
           +   PV +   G K+     + +S L+  TG  + + P+  + NGLPLFCRL+ V   LV
Sbjct: 62  ARVDPVKELVSGNKTIPTPVYRISVLELGTGLRSELPPVPGHSNGLPLFCRLVSVGSDLV 121

Query: 124 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMP-EKRSFFG-AAECGGEIFVTGGHDEGK 183
           ++ G DP ++R    VFV+ F    WR GK MP   RSFF  A++    +FV GGHDE K
Sbjct: 122 VLCGLDPVTWRTSDSVFVFSFLTSTWRVGKSMPGGPRSFFACASDSQRNVFVAGGHDEDK 181

Query: 184 NAAATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFD 243
           NA  +A  Y++  D W  LP M   RDEC A+    +  V+ GY TE QG F  TAE FD
Sbjct: 182 NAMMSALVYDVAEDRWAFLPDMGRERDECTAIFHAGKFHVIGGYSTEEQGQFSKTAESFD 241

Query: 244 TKTGKWRRVDSAWCGDISPR--SVVGVGREGELY-------------SWAAVA-AAATTT 303
             T +W      +          +   G  G+LY             +W  V    A   
Sbjct: 242 VTTWRWSPQGEEFLSSEMTMWPPICAAGENGDLYACCRRDLMMMKDDTWYKVGNLPADVC 301

Query: 304 GVTAEGI-VGVNMVDKAIVFMGKSGI-FMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
            V+   I    N+V       G+  + +  +  N ++ ++E  +++ G VQ+ C+ EI
Sbjct: 302 NVSYVAIRRSGNLVVIGSARYGEPSVGYNWDMSNSRWLKLETHDKYEGHVQAGCFLEI 359

[Close]

BLAST of Clc10G17220 vs. ExPASy Swiss-Prot
Match: Q9M8L2 (F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.2e-46
Identity = 104/274 (37.96%), Postives = 146/274 (53.28%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           ELIP LP+++A +CL RS +    V A V R W        F + RK S  + + +   Q
Sbjct: 2   ELIPNLPDDVARECLLRSSYQQFPVIASVCRAWNREVSLSQFLHQRKASRHSQELLILSQ 61

Query: 64  SLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLVMIG 123
           +   P   G   A P  + +S L+  +G WT + PI     GLPLFCRL+ V   L+++G
Sbjct: 62  ARVDPAGSGKIIATP-EYRISVLESGSGLWTELPPIPGQTKGLPLFCRLVSVGSDLIVLG 121

Query: 124 GWDPASYRPVQDVFVYEFAAEKWRQGKGMP-EKRSFFG-AAECGGEIFVTGGHDEGKNAA 183
           G DP +++    VFV+ F   KWR G  MP  +RSFFG A++    + V GGH+E K A 
Sbjct: 122 GLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCAL 181

Query: 184 ATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTKT 243
            +A  Y++  D+W  LP M+  RDEC+AV       V+ GY TE QG F  TAE FD  T
Sbjct: 182 TSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIGGYATEEQGQFSKTAESFDVST 241

Query: 244 GKWRRVDSAWCGD----ISPRSVVGVGREGELYS 272
            +W  +   +  D    +SP + V     G+LY+
Sbjct: 242 WEWGPLTEDFLDDTGDTVSPPTCVA---GGDLYA 271

[Close]

BLAST of Clc10G17220 vs. ExPASy Swiss-Prot
Match: Q9M1Y1 (F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.8e-44
Identity = 101/293 (34.47%), Postives = 150/293 (51.19%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           +LIPGLPEE+A++CL R  F  H     V R W+ +  SR F   R   G+    +  VQ
Sbjct: 14  DLIPGLPEELAIECLVRVPFQFHSSIKSVCRSWKCVISSRSFIKERIGFGKAESLLCLVQ 73

Query: 64  SLPAPVSDGAKSAVPVA---------------------------FGVSALDPATGNWTRI 123
            L +P S        ++                           +G+S  +     W R+
Sbjct: 74  PLTSPPSPAMMEGGEMSQKKKEEEEGESQMTQQLLQPRITGTPLYGLSVYNATLDTWHRV 133

Query: 124 KPIKKYPNGLPLFCRLIGVD--GKLVMIGGWDPASYRPVQDVFVYEFAA-----EKWRQG 183
                 P  +PLFC  + +   GK+++IGGWDP + +PV+DVFV +F A      ++R+G
Sbjct: 134 ----AIPERIPLFCECVAIQDAGKVLLIGGWDPETLQPVRDVFVLDFFAGEGSGRRFRRG 193

Query: 184 KGMPEKRSFFGAAECGG-EIFVTGGHDEGKNAAATAWAYNIRNDEWRELPAMSGGRDECE 243
           + M   RSFF  A  G  +++V GGHD+ KNA  +A  Y++  DEW  LP M+ GRDEC 
Sbjct: 194 RPMSAARSFFACASVGSTKVYVAGGHDDQKNALRSAEVYDVEKDEWSMLPPMTEGRDECH 253

Query: 244 AVAIGSE--IWVVSGYGTENQGNFETTAEVFDTKTGKWRRVDSAW-CGDISPR 259
             ++ ++    V+SGYGTE QG F +  E++D  T  W  +++ W   D+SPR
Sbjct: 254 GFSMATDPGFCVLSGYGTETQGQFRSDGEIYDPITNSWSTIENVWPFPDLSPR 302

[Close]

BLAST of Clc10G17220 vs. ExPASy Swiss-Prot
Match: Q9CAG8 (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.2e-15
Identity = 65/247 (26.32%), Postives = 112/247 (45.34%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           M + LIPGLP+++A QCL             V ++WR +  S++F  +R+L+G   + ++
Sbjct: 35  MDDPLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLY 94

Query: 61  AVQSLPAPVSDGAKSAVP-VAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKL 120
            V ++ A   D     +  +   +S+L P  G      P K    G     +++ VDGKL
Sbjct: 95  -VLTMNAGGKDNRWEVMDCLGQKLSSLPPMPG------PAK---TGF----KVVVVDGKL 154

Query: 121 VMIGG--WDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEG 180
           ++I G      S     DV+ Y+     W +   +   R  F  AE  G ++V GGH   
Sbjct: 155 LVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVD 214

Query: 181 KNAAATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVF 240
             + ++A  Y+     W  + ++   R  C A A   +++V+ G      GN     +V+
Sbjct: 215 GESLSSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGGRSNFTIGN-SKLLDVY 266

Query: 241 DTKTGKW 245
           +T+ G W
Sbjct: 275 NTQCGSW 266

[Close]

BLAST of Clc10G17220 vs. ExPASy TrEMBL
Match: A0A0A0LEY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G792070 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.5e-168
Identity = 287/338 (84.91%), Postives = 309/338 (91.42%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           + +ELIPGLPEEIAL+CLTRSHFTTHRVAARVSRRW  LFLSR FYNLRKLSGRTHKAVF
Sbjct: 11  IGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVF 70

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSL  PVSD AKSA P+AFGVSA DPATGNWTRIKPI+KYPNGLPLFCR+IGVDGKL 
Sbjct: 71  AVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 130

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDP SYRPV+DVFVYEFAAEKWRQGKGMPEKRSFFGA E GGEIFV GGHDEGKNA
Sbjct: 131 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 190

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           AA+AW YNIRNDEWRELPAMS GRDECEAVAIGSEIWVVSGY TENQGNFE TAEV++TK
Sbjct: 191 AASAWVYNIRNDEWRELPAMSRGRDECEAVAIGSEIWVVSGYETENQGNFERTAEVYETK 250

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIV 300
           TGKWRRV+SAWC + SPR+VVGVGREGEL++WA  AAAA TT VT EGIVGVNM +KAIV
Sbjct: 251 TGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIVGVNMEEKAIV 310

Query: 301 FMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           FMG++G+FMGE QNGK ER+E+PEEFSGFVQSACYT I
Sbjct: 311 FMGRNGVFMGECQNGKLERIELPEEFSGFVQSACYTHI 348

[Close]

BLAST of Clc10G17220 vs. ExPASy TrEMBL
Match: A0A5D3DP02 (F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005130 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.9e-164
Identity = 283/339 (83.48%), Postives = 308/339 (90.86%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           MA+ELIPGLPEEIAL+CLTRSHFTTHR+AARVSRRWR LFLSR FYNLRKLSGRTHKAVF
Sbjct: 4   MADELIPGLPEEIALECLTRSHFTTHRLAARVSRRWRRLFLSRHFYNLRKLSGRTHKAVF 63

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSLP PVSD AKSA P+AFGVSA DPATGNWTRIKPI+KYPNGLPLFCR+IGVDGKL 
Sbjct: 64  AVQSLPLPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 123

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDP SYRPV+DVFVY+FAAEKWRQGKGMPEKRSFFGA E GGEIFV GGHDEGKNA
Sbjct: 124 VIGGWDPVSYRPVEDVFVYDFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 183

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           AATAW YNIRNDEWRELPAM  GRDECEAVAIGSEIWVVSGY TENQG+FE TAEV++TK
Sbjct: 184 AATAWVYNIRNDEWRELPAMGAGRDECEAVAIGSEIWVVSGYETENQGDFERTAEVYETK 243

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDK-AI 300
           TGKWRRV++AWC + SPR+VVGVGREGEL++WA V  AA TT V  EGIVGVNM +K A+
Sbjct: 244 TGKWRRVENAWCEERSPRNVVGVGREGELFNWATV--AAKTTAVEGEGIVGVNMEEKGAM 303

Query: 301 VFMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           VFMG++G+FMGEGQ GK ER+E+PEEFSGFVQSA YT I
Sbjct: 304 VFMGRNGVFMGEGQYGKLERIELPEEFSGFVQSASYTHI 340

[Close]

BLAST of Clc10G17220 vs. ExPASy TrEMBL
Match: A0A1S3B7S9 (F-box/kelch-repeat protein At2g44130-like OS=Cucumis melo OX=3656 GN=LOC103486736 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.9e-164
Identity = 283/339 (83.48%), Postives = 308/339 (90.86%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           MA+ELIPGLPEEIAL+CLTRSHFTTHR+AARVSRRWR LFLSR FYNLRKLSGRTHKAVF
Sbjct: 4   MADELIPGLPEEIALECLTRSHFTTHRLAARVSRRWRRLFLSRHFYNLRKLSGRTHKAVF 63

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSLP PVSD AKSA P+AFGVSA DPATGNWTRIKPI+KYPNGLPLFCR+IGVDGKL 
Sbjct: 64  AVQSLPLPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 123

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDP SYRPV+DVFVY+FAAEKWRQGKGMPEKRSFFGA E GGEIFV GGHDEGKNA
Sbjct: 124 VIGGWDPVSYRPVEDVFVYDFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 183

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           AATAW YNIRNDEWRELPAM  GRDECEAVAIGSEIWVVSGY TENQG+FE TAEV++TK
Sbjct: 184 AATAWVYNIRNDEWRELPAMGAGRDECEAVAIGSEIWVVSGYETENQGDFERTAEVYETK 243

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDK-AI 300
           TGKWRRV++AWC + SPR+VVGVGREGEL++WA V  AA TT V  EGIVGVNM +K A+
Sbjct: 244 TGKWRRVENAWCEERSPRNVVGVGREGELFNWATV--AAKTTAVEGEGIVGVNMEEKGAM 303

Query: 301 VFMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           VFMG++G+FMGEGQ GK ER+E+PEEFSGFVQSA YT I
Sbjct: 304 VFMGRNGVFMGEGQYGKLERIELPEEFSGFVQSASYTHI 340

[Close]

BLAST of Clc10G17220 vs. ExPASy TrEMBL
Match: A0A6J1J0Y8 (F-box/kelch-repeat protein At2g44130-like OS=Cucurbita maxima OX=3661 GN=LOC111481691 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154
Identity = 269/338 (79.59%), Postives = 293/338 (86.69%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           MA+ELIPGLPEEIAL CL RSHFTTHR+AARV RRWR LFLSRDF+NLR++S RTHKAVF
Sbjct: 1   MAQELIPGLPEEIALDCLIRSHFTTHRIAARVCRRWRGLFLSRDFHNLRRISDRTHKAVF 60

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSL  P  DG KS  P+AFG+SA DPATG WT IKPI+KY NGLPLFCRLIGVDGKLV
Sbjct: 61  AVQSLLVPAGDGDKSTAPLAFGLSAFDPATGKWTWIKPIEKYSNGLPLFCRLIGVDGKLV 120

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDPASYRPV+DVFVY+ AAEKWRQGKGMP  RSFF A ECGGEIFV GGHDE KNA
Sbjct: 121 VIGGWDPASYRPVEDVFVYDMAAEKWRQGKGMPATRSFFSAVECGGEIFVAGGHDEWKNA 180

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           A+TAWAYNI+NDEWRELPAMS GRDECEAVAIGS+IWVVSGY TENQGNFE TAE+FDT+
Sbjct: 181 ASTAWAYNIKNDEWRELPAMSCGRDECEAVAIGSDIWVVSGYRTENQGNFEATAEIFDTE 240

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIV 300
           T KWRRVDSAW  + SPR VVGV REG L+SWA  AA A TT VTAE +VGVNM  KA+V
Sbjct: 241 TEKWRRVDSAWREERSPRGVVGVSREGGLFSWA--AAVAATTAVTAEEVVGVNMEGKAMV 300

Query: 301 FMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           F+G+ GIF  EGQN KFERMEVPE+F+GFVQSACYTEI
Sbjct: 301 FVGRHGIFTREGQNSKFERMEVPEDFTGFVQSACYTEI 336

[Close]

BLAST of Clc10G17220 vs. ExPASy TrEMBL
Match: A0A6J1F4W9 (F-box/kelch-repeat protein At2g44130-like OS=Cucurbita moschata OX=3662 GN=LOC111442196 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.4e-152
Identity = 265/338 (78.40%), Postives = 289/338 (85.50%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           MA+ELIPGLPEEIAL CL RSHFTTHR+AARV RRWR LFLSRDFYNLR++S RTHK VF
Sbjct: 1   MAQELIPGLPEEIALDCLIRSHFTTHRIAARVCRRWRGLFLSRDFYNLRRISDRTHKVVF 60

Query: 61  AVQSLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 120
           AVQSL  P  DG KS  P AFG+SA DPATG WT IKPI+KYPN LPLFCRLIGVDGKLV
Sbjct: 61  AVQSLLVPAGDGDKSTAPPAFGLSAFDPATGKWTWIKPIEKYPNRLPLFCRLIGVDGKLV 120

Query: 121 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEGKNA 180
           +IGGWDPASYRPV++VFVY+ AAEKWRQGKGMP  RSFF A E GGEIFV GGHDE KNA
Sbjct: 121 VIGGWDPASYRPVEEVFVYDIAAEKWRQGKGMPATRSFFSAVEFGGEIFVAGGHDEWKNA 180

Query: 181 AATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTK 240
           A+TAW YNI+NDEWRELPAMS GRDECEAVAIGS+IWVVSGY TENQGNFE TAE+F+T+
Sbjct: 181 ASTAWVYNIKNDEWRELPAMSYGRDECEAVAIGSDIWVVSGYRTENQGNFEATAEIFNTE 240

Query: 241 TGKWRRVDSAWCGDISPRSVVGVGREGELYSWAAVAAAATTTGVTAEGIVGVNMVDKAIV 300
           T +WRRVDSAW  + SPR VVGV REGEL+SWA  AA  TTT VTAEG+VGV M  KA+V
Sbjct: 241 TEEWRRVDSAWREERSPRGVVGVSREGELFSWA--AAVETTTAVTAEGVVGVTMEGKAMV 300

Query: 301 FMGKSGIFMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
           F+G+ GIF  EG N KFERMEVPEEF+GFVQSACYTEI
Sbjct: 301 FVGRHGIFTREGHNSKFERMEVPEEFTGFVQSACYTEI 336

[Close]

BLAST of Clc10G17220 vs. TAIR 10
Match: AT2G44130.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 3.6e-50
Identity = 109/280 (38.93%), Postives = 149/280 (53.21%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           ELIPGLP E+AL+CL R  F        V R WR L     F   R+  G+T   +  VQ
Sbjct: 18  ELIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERRRCGKTELLLCLVQ 77

Query: 64  SL--PAPVSDGAKSAVPV-----------------AFGVSALDPATGNWTRIKPIKKYPN 123
            L  P P S      + V                  FG+S  + A   W R+   ++   
Sbjct: 78  PLTPPIPASKSVDETLMVDEKKSEDESHPRVFCTPRFGLSVYNAAMSTWHRVAFPEE--E 137

Query: 124 GLPLFCRLIGVD--GKLVMIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAA 183
            +PLFC  + +   GK+++IGGWDP + +P +DV+V EFA  KWR+G  M E RSFF  A
Sbjct: 138 QIPLFCECVVLQDAGKILLIGGWDPETLQPTRDVYVLEFAGRKWRRGAPMKESRSFFACA 197

Query: 184 ECG-GEIFVTGGHDEGKNAAATAWAYNIRNDEWRELPAMSGGRDECE--AVAIGSEIWVV 243
                +++V GGHD+ KNA  +A  Y++  DEW  +  M+ GRDEC+  AV +G    V+
Sbjct: 198 SVSPTKVYVAGGHDDQKNALRSAEVYDVEKDEWSSVTPMTEGRDECQGFAVGMGLRFCVL 257

Query: 244 SGYGTENQGNFETTAEVFDTKTGKWRRVDSAW-CGDISPR 259
           SGYGTE+QG F +  E++D  T  W R+D+ W   D SPR
Sbjct: 258 SGYGTESQGRFRSDGEIYDPATDSWSRIDNVWRFPDTSPR 295

[Close]

BLAST of Clc10G17220 vs. TAIR 10
Match: AT1G15670.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-48
Identity = 120/358 (33.52%), Postives = 174/358 (48.60%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           ELIP LPE +A +CL RS +    + A V + W+      DF+  RK SG + + V   Q
Sbjct: 2   ELIPDLPETVAYECLLRSSYKQFPLMASVCKLWQREISLSDFFRHRKASGHSQELVVLSQ 61

Query: 64  SLPAPVSD---GAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLV 123
           +   PV +   G K+     + +S L+  TG  + + P+  + NGLPLFCRL+ V   LV
Sbjct: 62  ARVDPVKELVSGNKTIPTPVYRISVLELGTGLRSELPPVPGHSNGLPLFCRLVSVGSDLV 121

Query: 124 MIGGWDPASYRPVQDVFVYEFAAEKWRQGKGMP-EKRSFFG-AAECGGEIFVTGGHDEGK 183
           ++ G DP ++R    VFV+ F    WR GK MP   RSFF  A++    +FV GGHDE K
Sbjct: 122 VLCGLDPVTWRTSDSVFVFSFLTSTWRVGKSMPGGPRSFFACASDSQRNVFVAGGHDEDK 181

Query: 184 NAAATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFD 243
           NA  +A  Y++  D W  LP M   RDEC A+    +  V+ GY TE QG F  TAE FD
Sbjct: 182 NAMMSALVYDVAEDRWAFLPDMGRERDECTAIFHAGKFHVIGGYSTEEQGQFSKTAESFD 241

Query: 244 TKTGKWRRVDSAWCGDISPR--SVVGVGREGELY-------------SWAAVA-AAATTT 303
             T +W      +          +   G  G+LY             +W  V    A   
Sbjct: 242 VTTWRWSPQGEEFLSSEMTMWPPICAAGENGDLYACCRRDLMMMKDDTWYKVGNLPADVC 301

Query: 304 GVTAEGI-VGVNMVDKAIVFMGKSGI-FMGEGQNGKFERMEVPEEFSGFVQSACYTEI 339
            V+   I    N+V       G+  + +  +  N ++ ++E  +++ G VQ+ C+ EI
Sbjct: 302 NVSYVAIRRSGNLVVIGSARYGEPSVGYNWDMSNSRWLKLETHDKYEGHVQAGCFLEI 359

[Close]

BLAST of Clc10G17220 vs. TAIR 10
Match: AT1G80440.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 3.7e-47
Identity = 104/274 (37.96%), Postives = 146/274 (53.28%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           ELIP LP+++A +CL RS +    V A V R W        F + RK S  + + +   Q
Sbjct: 2   ELIPNLPDDVARECLLRSSYQQFPVIASVCRAWNREVSLSQFLHQRKASRHSQELLILSQ 61

Query: 64  SLPAPVSDGAKSAVPVAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKLVMIG 123
           +   P   G   A P  + +S L+  +G WT + PI     GLPLFCRL+ V   L+++G
Sbjct: 62  ARVDPAGSGKIIATP-EYRISVLESGSGLWTELPPIPGQTKGLPLFCRLVSVGSDLIVLG 121

Query: 124 GWDPASYRPVQDVFVYEFAAEKWRQGKGMP-EKRSFFG-AAECGGEIFVTGGHDEGKNAA 183
           G DP +++    VFV+ F   KWR G  MP  +RSFFG A++    + V GGH+E K A 
Sbjct: 122 GLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCAL 181

Query: 184 ATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVFDTKT 243
            +A  Y++  D+W  LP M+  RDEC+AV       V+ GY TE QG F  TAE FD  T
Sbjct: 182 TSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIGGYATEEQGQFSKTAESFDVST 241

Query: 244 GKWRRVDSAWCGD----ISPRSVVGVGREGELYS 272
            +W  +   +  D    +SP + V     G+LY+
Sbjct: 242 WEWGPLTEDFLDDTGDTVSPPTCVA---GGDLYA 271

[Close]

BLAST of Clc10G17220 vs. TAIR 10
Match: AT3G59940.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 180.3 bits (456), Expect = 2.7e-45
Identity = 101/293 (34.47%), Postives = 150/293 (51.19%), Query Frame = 0


Query: 4   ELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVFAVQ 63
           +LIPGLPEE+A++CL R  F  H     V R W+ +  SR F   R   G+    +  VQ
Sbjct: 14  DLIPGLPEELAIECLVRVPFQFHSSIKSVCRSWKCVISSRSFIKERIGFGKAESLLCLVQ 73

Query: 64  SLPAPVSDGAKSAVPVA---------------------------FGVSALDPATGNWTRI 123
            L +P S        ++                           +G+S  +     W R+
Sbjct: 74  PLTSPPSPAMMEGGEMSQKKKEEEEGESQMTQQLLQPRITGTPLYGLSVYNATLDTWHRV 133

Query: 124 KPIKKYPNGLPLFCRLIGVD--GKLVMIGGWDPASYRPVQDVFVYEFAA-----EKWRQG 183
                 P  +PLFC  + +   GK+++IGGWDP + +PV+DVFV +F A      ++R+G
Sbjct: 134 ----AIPERIPLFCECVAIQDAGKVLLIGGWDPETLQPVRDVFVLDFFAGEGSGRRFRRG 193

Query: 184 KGMPEKRSFFGAAECGG-EIFVTGGHDEGKNAAATAWAYNIRNDEWRELPAMSGGRDECE 243
           + M   RSFF  A  G  +++V GGHD+ KNA  +A  Y++  DEW  LP M+ GRDEC 
Sbjct: 194 RPMSAARSFFACASVGSTKVYVAGGHDDQKNALRSAEVYDVEKDEWSMLPPMTEGRDECH 253

Query: 244 AVAIGSE--IWVVSGYGTENQGNFETTAEVFDTKTGKWRRVDSAW-CGDISPR 259
             ++ ++    V+SGYGTE QG F +  E++D  T  W  +++ W   D+SPR
Sbjct: 254 GFSMATDPGFCVLSGYGTETQGQFRSDGEIYDPITNSWSTIENVWPFPDLSPR 302

[Close]

BLAST of Clc10G17220 vs. TAIR 10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 5.8e-16
Identity = 65/247 (26.32%), Postives = 112/247 (45.34%), Query Frame = 0


Query: 1   MAEELIPGLPEEIALQCLTRSHFTTHRVAARVSRRWRHLFLSRDFYNLRKLSGRTHKAVF 60
           M + LIPGLP+++A QCL             V ++WR +  S++F  +R+L+G   + ++
Sbjct: 35  MDDPLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLY 94

Query: 61  AVQSLPAPVSDGAKSAVP-VAFGVSALDPATGNWTRIKPIKKYPNGLPLFCRLIGVDGKL 120
            V ++ A   D     +  +   +S+L P  G      P K    G     +++ VDGKL
Sbjct: 95  -VLTMNAGGKDNRWEVMDCLGQKLSSLPPMPG------PAK---TGF----KVVVVDGKL 154

Query: 121 VMIGG--WDPASYRPVQDVFVYEFAAEKWRQGKGMPEKRSFFGAAECGGEIFVTGGHDEG 180
           ++I G      S     DV+ Y+     W +   +   R  F  AE  G ++V GGH   
Sbjct: 155 LVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVD 214

Query: 181 KNAAATAWAYNIRNDEWRELPAMSGGRDECEAVAIGSEIWVVSGYGTENQGNFETTAEVF 240
             + ++A  Y+     W  + ++   R  C A A   +++V+ G      GN     +V+
Sbjct: 215 GESLSSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGGRSNFTIGN-SKLLDVY 266

Query: 241 DTKTGKW 245
           +T+ G W
Sbjct: 275 NTQCGSW 266

The following BLAST results are available for this feature:

BLAST of Clc10G17220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904459.1	4.5e-180	91.72	F-box/kelch-repeat protein At2g44130-like [Benincasa hispida]	[more]
XP_004136552.3	5.2e-168	84.91	F-box/kelch-repeat protein At2g44130 [Cucumis sativus]	[more]
KGN59267.1	5.2e-168	84.91	hypothetical protein Csa_002357 [Cucumis sativus]	[more]
XP_008443007.1	6.0e-164	83.48	PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis melo] >KAA0043760....	[more]
XP_022983021.1	3.3e-154	79.59	F-box/kelch-repeat protein At2g44130-like [Cucurbita maxima]	[more]

BLAST of Clc10G17220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80582	5.1e-49	38.93	F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g4413...	[more]
Q9LMR5	2.8e-47	33.52	F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g1567...	[more]
Q9M8L2	5.2e-46	37.96	F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g8044...	[more]
Q9M1Y1	3.8e-44	34.47	F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1...	[more]
Q9CAG8	8.2e-15	26.32	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]

BLAST of Clc10G17220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEY5	2.5e-168	84.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G792070 PE=4 SV=1	[more]
A0A5D3DP02	2.9e-164	83.48	F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B7S9	2.9e-164	83.48	F-box/kelch-repeat protein At2g44130-like OS=Cucumis melo OX=3656 GN=LOC10348673...	[more]
A0A6J1J0Y8	1.6e-154	79.59	F-box/kelch-repeat protein At2g44130-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1F4W9	7.4e-152	78.40	F-box/kelch-repeat protein At2g44130-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Clc10G17220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44130.1	3.6e-50	38.93	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G15670.1	2.0e-48	33.52	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G80440.1	3.7e-47	37.96	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G59940.1	2.7e-45	34.47	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.1	5.8e-16	26.32	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 9..49 e-value: 0.003 score: 26.8
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 118..166 e-value: 1.6E-5 score: 34.3 coord: 167..214 e-value: 1.5E-5 score: 34.4
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 206..247 e-value: 3.7E-5 score: 23.2 coord: 156..201 e-value: 7.4E-11 score: 41.5 coord: 115..153 e-value: 3.7E-5 score: 23.2
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 54..285 e-value: 8.4E-39 score: 135.2
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 83..261
IPR044595	F-box/kelch-repeat protein KMD1/2-like	PANTHER	PTHR46407	OS02G0208700 PROTEIN	coord: 3..338
None	No IPR available	PANTHER	PTHR46407:SF6	F-BOX/KELCH-REPEAT PLANT-LIKE PROTEIN	coord: 3..338
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 6..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G17220.1	Clc10G17220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080037	negative regulation of cytokinin-activated signaling pathway
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
molecular_function	GO:0005515	protein binding