Clc10G16670 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGGATCTGTCCAGAATCGGGAAAGTGCCTAGACATTCCTGTTTCATCTTTGAACTTCAAGCAGCGCCTCGATGAAGCTAAAAAGCGAAACAATGGCAAATTCAGAAGCAACTTCTTCAATACAAATCCAAGAAGACAATATGGGCATTGCCCATTTCTACTCTCCAAGCAATTTGGCTACTTAAAAACCCTAAATCCCAAAGAGGGTCTGTGTGTTCGTGGCTCAAAATTAATCAGAAAGTTATCCTTCTAGGTATTCTTTCCTTTAATCCCATTTCTTGAATCTTATGCCAATTTGGGTTTCCTTCTTTGTTTCTTTCTTTCTTTCTTTCACGTGCTTTTGGGTTTTTCTTCGAATTTTAAATCTCCTTCCATTGTTTCTCCCCTCTTTGATTTTATCGTCTTCTCTGCTTCACTCCATCTTTCCCCGTTTGATTTCGTTTCTTAAATTGGTTTTTATGATTTGGTTTGTTTATCGACTTGGTTCTTAGTTCTTTCATAAGCTTTGTGTTCAGAGTTGCTGATTCTTGAGTTTGCCATTTTTCTTTAGTTTATATGGTAATAGGGACTCTTATTTTCTTCGTTCTTGTTGTGTTTCCTTTTCCCCTTTCATTCTGTTTTGTTAATTTTCTTTTGGGTATGTGCATATAATTATAGCCGTCTGCTGGACTTTGGTCTATATTTCATAAACTGCAACATTATGCGAATCCGTATTGACAAAAAGAATGAATAAACGTAGCTGAACTTTAATTCTTAGTCATGGATATTTTAGATTCTATGAGCCGTGGTAGGTTGAAATTGAAGTCATATTCGACCGGTTGTTTATTGTAATTTTGATTTCGATGGAGTATGAAATTATTTAGTATATTGATCAAACATTATTAAATGTAATACTTGAACCATTTGAAGTATTATTTTCAAGAATGAAAATTTAAGGGGAAACAATGAGTGATATGGAACACATTGTGCATTCGTTTTTTAGTGAAACAAGTCCATTTGCCTGTTAAGGACTTATGAGAAAAAACCTTATACCTGCTAATAACTGTAAGGAGATTTGGGTTGTGCTGCACATTGATAACCATTTGATTTTTGAAAATTATGTTATAAACTCTACTTCTACCCATAAATTCTATGTTTTGCTATCCACTTTCTGCTCAAAAGTAGTTTCCAAAAACTTGTTCGTTTAGAAAATACTAGGAGTTTTAAGAAATGTGAAAACCATCATTGAAAAATGGAGAGAAACAAGTATAAGTTTCAAAAACAAAAAACAAAAATTGAAATCGTTATCAAACGGGGACAAGTTTACACTTTAATTTTATTGTAAGAAGGTTTTTTAATTTTCAATCACGAGTTTGTCTTTGTATCTCCCAACTCACATCTATGTTGTTCCCGTTATAAACAAGTATGATTCTCATTTATAGAATGAAATGAGGTTCAAGAAAAACAAGTTTCCTTACCAGTAGGTTAAGAGAACCAAGTAGCCAAAGGTAGTGCCTTCCACTTCCTATTTTTTGGCCTATCATTGGCCTCTTCAGACTTCCGTATTTTTGTAAATGCTCTTCTAAGGTCCGCTATTTTATAAATACTTAACTCTTATAGCTAACATTTTCCTCATGTATCTCATTCATTATATTTCTTATCCCATTTAAGGAAAGAAATCCATACAACTTAGAATATTCAAAGGATTTCTATTTAACTTCTCTTGTTATTATATGTAATGCAATAAAACAAGTTATAACAAATTGATAATGGAATGTTGTGAGCGACTACTACTTTCAAAGTGGCTGAATGAAAATAAATGTTGGATGAGATAGTTGAATTATTTATTTATTGAGAAAGATCGCTTTGGCATGGTCACACTCACCTGTTTTCTTGTTATTTATTTGTCCCTCCTTTCTGTTTAAATTTTGTTCGTCCGATGAAAACTTTTGGAATTGTTACCAATGTAATGCTTTCAATTGCTGTTTTCTTTTCTTTGTCTTTTTCTTTTTTTTTTTTTAAAAAAAAAAAAAAAAATTTGTTCTGTTAATTCCTCAGGCTGCACCACCATGAGTATCGGTTCAATCAGTGTTTGCACAAGGAATGCTGTCCCTCTGAACGTCCGCGTTTGCACACATATGGGCAGCAATATCTGCACAGTGCTGTCCCGAAGAACATCAACTTCGTGCTGTTCCTATGGCATTTCAAGACCAAAATATGCCGATCAATCCGTCACCACAATATCGTCTTGTTCACCAAATACTAGTCACAGATTTCAGGGAGGCTGTCTTAGTTCTTGCTTCTCCAGAAGGTCAATTGACTTCCAAGCTTTAACGGTTAAAAATTTGATCACCGCTGGAGGATCACATGGAAGAGAACTTGAAATTTCACTGGCATGTAAAGGTATGAATGTGAAGCTCTCAATCCCCAATGATGGGATGTTTAGCAAAATCAAGTATAGCATGCGATGGCCAGAAAGATGGGCATCTGCTGGCTTAGTTTTTGGGTGGGTGGTTTGTTATTCAACTTCTGAACCAGTCCATGCTGAAGCAGCTTATGAGAAAGAGGACAATGAAGAAAACTCTGATTCATCTCATGTCAAATTATCTCATGGAAAGAAGGTTTACACAGACTATTCTGTTATCGGTGAGCTTCGAAGTCTTCCATTTCCTTGTTTTACGTTAAATGATCAATTGATAATTGCTTGTAAATCTTATTAGCAAAGTACCATGGATTAAAGGAAAAGATGTGGAATGTAAGCAACCTGTTTGTTCTGGACAGGAATTCCCGGAGATGGAAGATGTTTGTTCCGCTCAGTCGCTCATGGTGCTTGTTTGCGATCCGGGAAACCAGCTCCAAGTGAGAGCCTTCAGAGAGATTTGGCAGATGATTTGCGATCCAAAGTACGTTGTATTAGTTTGTTTTTAAGTGAATACCATGGTTACATTTACACACACCCTACTGTAGCCATCTAGATTCCATCTTTTGGACCGATTTCTTTGCAAAATTATAGATGGATGCCCGTTTACTTAAAAACGATGAATCACACATCTTTCAGGTTGCAGATGAGTTCATCAAGAGACGTGAGGAAACAGAATGGTGAAAATCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACAAAAGGAGTTTTCACATCAATAACTCTACTTTTGTAGGATCATAAACATGAACACTTCCTGAGATTGGGTTGTCCTGCTTGTGTTGTCAACAGGTTTGTTGAAGGCGATTTTGAAACATACGTGTCAAATATGCGAAAACCACACGTGTGGGGAGGCGAGCCAGAGTTATTCATGGCTTCGCATGTTCTTCGGTAAGCTCTCTCTCAGTCTGTGTGTGTTGTGTAGTGCATATATGAGTGAATTGGTTTATGATGAAGGCTGTGATTGCTGCTCCGCAGTGCACCTATCAGAGTGTACATGTACGATAAGGATTCTGGTGGGTTGATTTCCATAGCTGAATATGGCGATGAATATGGCAAAGAAAATCCAATCAGAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCAAATCAAGGGGTAGGTAGATCAAAACTCTAGTGTTCTAACTGAATCATTCTTATTTGAATTACATTCTCTTTCATTCTATAAAATAAATCTCTCTCCATTCCAATGAGAATCCAGCATAGAGACTTCTCTTTA CAGGATCTGTCCAGAATCGGGAAAGTGCCTAGACATTCCTGTTTCATCTTTGAACTTCAAGCAGCGCCTCGATGAAGCTAAAAAGCGAAACAATGGCAAATTCAGAAGCAACTTCTTCAATACAAATCCAAGAAGACAATATGGGCATTGCCCATTTCTACTCTCCAAGCAATTTGGCTACTTAAAAACCCTAAATCCCAAAGAGGGTCTGTGTGTTCGTGGCTCAAAATTAATCAGAAAGTTATCCTTCTAGGCTGCACCACCATGAGTATCGGTTCAATCAGTGTTTGCACAAGGAATGCTGTCCCTCTGAACGTCCGCGTTTGCACACATATGGGCAGCAATATCTGCACAGTGCTGTCCCGAAGAACATCAACTTCGTGCTGTTCCTATGGCATTTCAAGACCAAAATATGCCGATCAATCCGTCACCACAATATCGTCTTGTTCACCAAATACTAGTCACAGATTTCAGGGAGGCTGTCTTAGTTCTTGCTTCTCCAGAAGGTCAATTGACTTCCAAGCTTTAACGGTTAAAAATTTGATCACCGCTGGAGGATCACATGGAAGAGAACTTGAAATTTCACTGGCATGTAAAGGTATGAATGTGAAGCTCTCAATCCCCAATGATGGGATGTTTAGCAAAATCAAGTATAGCATGCGATGGCCAGAAAGATGGGCATCTGCTGGCTTAGTTTTTGGGTGGGTGGTTTGTTATTCAACTTCTGAACCAGTCCATGCTGAAGCAGCTTATGAGAAAGAGGACAATGAAGAAAACTCTGATTCATCTCATGTCAAATTATCTCATGGAAAGAAGGTTTACACAGACTATTCTGTTATCGGAATTCCCGGAGATGGAAGATGTTTGTTCCGCTCAGTCGCTCATGGTGCTTGTTTGCGATCCGGGAAACCAGCTCCAAGTGAGAGCCTTCAGAGAGATTTGGCAGATGATTTGCGATCCAAAATGGATGCCCGTTTACTTAAAAACGATGAATCACACATCTTTCAGGTTGCAGATGAGTTCATCAAGAGACGTGAGGAAACAGAATGGTTTGTTGAAGGCGATTTTGAAACATACGTGTCAAATATGCGAAAACCACACGTGTGGGGAGGCGAGCCAGAGTTATTCATGGCTTCGCATGTTCTTCGTGCACCTATCAGAGTGTACATGTACGATAAGGATTCTGGTGGGTTGATTTCCATAGCTGAATATGGCGATGAATATGGCAAAGAAAATCCAATCAGAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCAAATCAAGGGGTAGGTAGATCAAAACTCTAGTGTTCTAACTGAATCATTCTTATTTGAATTACATTCTCTTTCATTCTATAAAATAAATCTCTCTCCATTCCAATGAGAATCCAGCATAGAGACTTCTCTTTA ATGAGTATCGGTTCAATCAGTGTTTGCACAAGGAATGCTGTCCCTCTGAACGTCCGCGTTTGCACACATATGGGCAGCAATATCTGCACAGTGCTGTCCCGAAGAACATCAACTTCGTGCTGTTCCTATGGCATTTCAAGACCAAAATATGCCGATCAATCCGTCACCACAATATCGTCTTGTTCACCAAATACTAGTCACAGATTTCAGGGAGGCTGTCTTAGTTCTTGCTTCTCCAGAAGGTCAATTGACTTCCAAGCTTTAACGGTTAAAAATTTGATCACCGCTGGAGGATCACATGGAAGAGAACTTGAAATTTCACTGGCATGTAAAGGTATGAATGTGAAGCTCTCAATCCCCAATGATGGGATGTTTAGCAAAATCAAGTATAGCATGCGATGGCCAGAAAGATGGGCATCTGCTGGCTTAGTTTTTGGGTGGGTGGTTTGTTATTCAACTTCTGAACCAGTCCATGCTGAAGCAGCTTATGAGAAAGAGGACAATGAAGAAAACTCTGATTCATCTCATGTCAAATTATCTCATGGAAAGAAGGTTTACACAGACTATTCTGTTATCGGAATTCCCGGAGATGGAAGATGTTTGTTCCGCTCAGTCGCTCATGGTGCTTGTTTGCGATCCGGGAAACCAGCTCCAAGTGAGAGCCTTCAGAGAGATTTGGCAGATGATTTGCGATCCAAAATGGATGCCCGTTTACTTAAAAACGATGAATCACACATCTTTCAGGTTGCAGATGAGTTCATCAAGAGACGTGAGGAAACAGAATGGTTTGTTGAAGGCGATTTTGAAACATACGTGTCAAATATGCGAAAACCACACGTGTGGGGAGGCGAGCCAGAGTTATTCATGGCTTCGCATGTTCTTCGTGCACCTATCAGAGTGTACATGTACGATAAGGATTCTGGTGGGTTGATTTCCATAGCTGAATATGGCGATGAATATGGCAAAGAAAATCCAATCAGAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCAAATCAAGGGGTAGGTAGATCAAAACTCTAG MSIGSISVCTRNAVPLNVRVCTHMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISSCSPNTSHRFQGGCLSSCFSRRSIDFQALTVKNLITAGGSHGRELEISLACKGMNVKLSIPNDGMFSKIKYSMRWPERWASAGLVFGWVVCYSTSEPVHAEAAYEKEDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRDLADDLRSKMDARLLKNDESHIFQVADEFIKRREETEWFVEGDFETYVSNMRKPHVWGGEPELFMASHVLRAPIRVYMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIPANQGVGRSKL Homology
BLAST of Clc10G16670 vs. NCBI nr
Match: XP_008443087.1 (PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443088.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443089.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443090.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >KAA0043710.1 OTU domain-containing protein [Cucumis melo var. makuwa] >TYK25424.1 OTU domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 646.0 bits (1665), Expect = 1.9e-181 Identity = 317/352 (90.06%), Postives = 328/352 (93.18%), Query Frame = 0
BLAST of Clc10G16670 vs. NCBI nr
Match: XP_011652109.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Cucumis sativus] >XP_011652110.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Cucumis sativus] >XP_011652111.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Cucumis sativus]) HSP 1 Score: 633.3 bits (1632), Expect = 1.3e-177 Identity = 314/353 (88.95%), Postives = 326/353 (92.35%), Query Frame = 0
BLAST of Clc10G16670 vs. NCBI nr
Match: XP_038903218.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Benincasa hispida] >XP_038903219.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Benincasa hispida] >XP_038903220.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Benincasa hispida]) HSP 1 Score: 602.8 bits (1553), Expect = 1.9e-168 Identity = 303/352 (86.08%), Postives = 315/352 (89.49%), Query Frame = 0
BLAST of Clc10G16670 vs. NCBI nr
Match: XP_022935652.1 (OTU domain-containing protein At3g57810 isoform X2 [Cucurbita moschata] >XP_022935653.1 OTU domain-containing protein At3g57810 isoform X2 [Cucurbita moschata]) HSP 1 Score: 585.1 bits (1507), Expect = 4.0e-163 Identity = 290/355 (81.69%), Postives = 311/355 (87.61%), Query Frame = 0
BLAST of Clc10G16670 vs. NCBI nr
Match: XP_022935651.1 (OTU domain-containing protein At3g57810 isoform X1 [Cucurbita moschata]) HSP 1 Score: 585.1 bits (1507), Expect = 4.0e-163 Identity = 290/355 (81.69%), Postives = 311/355 (87.61%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy Swiss-Prot
Match: Q8LBZ4 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thaliana OX=3702 GN=OTU4 PE=1 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.8e-73 Identity = 168/352 (47.73%), Postives = 218/352 (61.93%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy Swiss-Prot
Match: Q8GYW0 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thaliana OX=3702 GN=OTU3 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 3.0e-12 Identity = 54/182 (29.67%), Postives = 85/182 (46.70%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy Swiss-Prot
Match: Q6GM06 (Deubiquitinase OTUD6B OS=Xenopus laevis OX=8355 GN=otud6b PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 7.2e-06 Identity = 44/196 (22.45%), Postives = 88/196 (44.90%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy Swiss-Prot
Match: Q96G74 (OTU domain-containing protein 5 OS=Homo sapiens OX=9606 GN=OTUD5 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 9.4e-06 Identity = 41/153 (26.80%), Postives = 64/153 (41.83%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy Swiss-Prot
Match: Q640H3 (OTU domain-containing protein 5-B OS=Xenopus laevis OX=8355 GN=otud5-b PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.7e-05 Identity = 40/152 (26.32%), Postives = 63/152 (41.45%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy TrEMBL
Match: A0A1S3B6T1 (OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1) HSP 1 Score: 646.0 bits (1665), Expect = 9.3e-182 Identity = 317/352 (90.06%), Postives = 328/352 (93.18%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy TrEMBL
Match: A0A5D3DP86 (OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005670 PE=4 SV=1) HSP 1 Score: 646.0 bits (1665), Expect = 9.3e-182 Identity = 317/352 (90.06%), Postives = 328/352 (93.18%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy TrEMBL
Match: A0A6J1FB45 (OTU domain-containing protein At3g57810 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442443 PE=4 SV=1) HSP 1 Score: 585.1 bits (1507), Expect = 1.9e-163 Identity = 290/355 (81.69%), Postives = 311/355 (87.61%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy TrEMBL
Match: A0A6J1F5B0 (OTU domain-containing protein At3g57810 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442443 PE=4 SV=1) HSP 1 Score: 585.1 bits (1507), Expect = 1.9e-163 Identity = 290/355 (81.69%), Postives = 311/355 (87.61%), Query Frame = 0
BLAST of Clc10G16670 vs. ExPASy TrEMBL
Match: A0A6J1DJP8 (OTU domain-containing protein At3g57810 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021529 PE=4 SV=1) HSP 1 Score: 574.3 bits (1479), Expect = 3.4e-160 Identity = 292/354 (82.49%), Postives = 308/354 (87.01%), Query Frame = 0
BLAST of Clc10G16670 vs. TAIR 10
Match: AT3G57810.2 (Cysteine proteinases superfamily protein ) HSP 1 Score: 277.7 bits (709), Expect = 1.3e-74 Identity = 168/352 (47.73%), Postives = 218/352 (61.93%), Query Frame = 0
BLAST of Clc10G16670 vs. TAIR 10
Match: AT3G57810.3 (Cysteine proteinases superfamily protein ) HSP 1 Score: 277.7 bits (709), Expect = 1.3e-74 Identity = 168/352 (47.73%), Postives = 218/352 (61.93%), Query Frame = 0
BLAST of Clc10G16670 vs. TAIR 10
Match: AT3G57810.1 (Cysteine proteinases superfamily protein ) HSP 1 Score: 266.5 bits (680), Expect = 2.9e-71 Identity = 132/217 (60.83%), Postives = 164/217 (75.58%), Query Frame = 0
BLAST of Clc10G16670 vs. TAIR 10
Match: AT2G38025.1 (Cysteine proteinases superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 2.1e-13 Identity = 54/182 (29.67%), Postives = 85/182 (46.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|