Clc10G15660 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G15660
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Transmembrane amino acid transporter family protein
Location	ClcChr10: 29385221 .. 29389955 (+)
RNA-Seq Expression	Clc10G15660
Synteny	Clc10G15660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGACCAATGATTGAATTTGCTTCCTTGACATTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTGCCTCCTAGAATTTCAAGTAGCTATGGGTGTTTTATTCTTCTAAGAACAGCCCTTGTTGCTTCTTCTGTTTGCGTGGCTTTCCTTCTGCCCTTTTTCGGTAATTATTTCTTCTTCAAGTTGTGTAATTGATCTACTTTCGTTTGAAGTCATCAATTATCATAATGGATCGTTATGTAGTAGATGATAATAACCTTTCCACTAATGTGATAGATGATGATAACCTTTCCTAAAATCTAATTTTCATCTAGTACCCCCAAAGTGTTAGCTCATATATATTTTCATGCTAGGAGCTCATTGATTAAGCATTAAACTGTACAGCTGTATAAATACAGTTAGATGCTTATTGATTAAGCATCTGATTGTAAAGCCAAATTGTAAACTCTTAATGAACTGTTTTATCTAAACATGGTAGATGAATTGAGTGTAATTGGAAGTAAGTTGGCATTTATGTTGATTGTAGGTCTTGTGATGGCTTTGATTGGCTCTCTTCTCAGCATACTTGTGGTAAGTGCATCTGGTTGATTATTTTTCTTGATGAAATTGTAATGTTGTTTTTACAATGCTTTTCGTTTTAGCTCAGGTTGTTCTACCCAATGATTATTAATATGTTAAGATTTTAGATGGTCACCCAGTGGGGCTGTTAGCTATTAAATTGTTGGTTAGCTTTCAATAAGTAAATGCCAGTAACAATTGGGAATTAGCAATTTGCTTGTAGTTTTAAGAAAAAAGGAGTTGGACATTTCTCAGTTTGCAAATTCTGGACTATGAAACTTTTTTTTTTAAAAAAAAAAAAAAGAAAAAAAGAGAAAAAGAAAAATACACTTATTATCATGAGGTTTGAATTCGCATTTTAGGTTCCTGAGTTTTCAAGCTAAACATTTTTACCACTGAGGTTGGGAATAATATCGTTTTTGGTCCCTACCACGAATATTAATTTTATGTTATGTAGGGTTTACTATACATTTTATTATTATAATTTTCAAGCTGATGTGACATAAGTATATATTAGTTTTGTATTTGTTAAATGATGTGGCAAAATCAAATTTGTTATTATTTTAAATATTAAATAATTAAAAATTTAGAACTTCTTCCTTCTTTTTCTATTCTCTCTCCTCCCACCTTCACCTCAACCACAACCTTGTCTTCACTCCCGCCCGACGTCAACCGTTGCCTACCACCATCTATCAACCTCGATGCCTCTTCTCTTTTCTCCTCTTCCTCTTCTTCCTCGTCCTTTTGTCTTCTACTCCTTTGCTTCATCTTTCTTTTTCATTTCTTTGCCCTCTGTCTAGCTCACGATGGCCTATCTCTAGCACTAATCTGAAAGAATTCTCTGGCTATGATCTATCTAGCCCGCTGGTGCTGATTTGGAACATTCGTTCCATATTTTTCAGATCAGTCGGTTTTGGTCAATGTTCGTAACTTTGTACTAACTAAACAAAAAATTGTGGGAAAAAGATAAAGAAGACAAAGGAAAAAACTAAGAAGAAAATAAGGAGAAATGAAGAACAGAGAATACATACTTAAAAAAAGAGGAATGCGATGAAGAAAATAAGAAAGAATGAAATAAGGCAAGAGATTGAGAAGAGAAGGAATGATGAAGAAGTAGGGAGATTGAAAAGAGAGAAGAAGCAAAATGAAAAAGGAAAAAAACGGAAGGATAAAATAAAAATGAGGAATTCGTGAAAGAGAAAAATTATAGGCTCCTTGGGGAAGAGGAAGACCATTCCATTTCCTAAGAGAGGAAAGTAAGGTTATGCCTGCAGCATAATGTTGTATTATTTATTTACTTATGTTTATGTTTATTATTATTATTATTATTATTATTATTATTAATTTTTTTTTTAATTTAAAGAAAATGGTTGGTCGGTCAGTTAGCCTCTTGTTAAGCCTTTTGACCGACCGGCAGTTGGTTCTGTACATGGAAAAAGCAGATTTCAACTGAGGATTGCTAGAAAACTGATTGGCTATCGTTGGTTCGGTCGATTGAGTCGGTTTTTGGTTTTAGTTTGTTCACCCTACTGACCATGGAGGCTGCATGTTGATTTACTAGTCCCACATTGTGAAGTCACATGCAGTCATCATCGATTGTGGATTTGGGCACATCGAAACAATTGTCTCAACTAAACGTGGAGAGGTTGCTCGTCCCTGTGGAGAAAACGACATCACTGACTCACTGTAGGAGGAAGCATGGTTTGGACAATGAATGAGAAAGAGGGGTGGAAGGGAGGAGTGAGAAATAGAGAACAGTGAAGAGAGAATAAAATAGAAGTAATAAGTTATCTAAAGTATAATTGTTTTAAACTACAAAATTGTTGGAAACATTTTTAAATATAGCAAAATATTATTGTCTATCAATGATAGACATTGATAGACAGTTATTATCTATCAGCATTAGACAGTGATAGATGTCTATAATGATATTTTGCTATATTTGTAATTAAGTTGGCTTATTTTTGCTATATTTAAAAAACAACCTAAGAAAAATAATAATAATTAATATGTTTTGATCACAAAATAATCAATCTAAAAATACACAATCAATATATTTAAGCCATGTTAGCTTGAAAATAATAACATTGAGTGGGCTGTAGTAGAGCAGAAGGCATTTTAAGTTTGAAATGCCCTCTAAGGGATAAAATGTAGATGTCATGTTTGAAAGTCAGCTAATACTGATCCACCTTTTCCAAGTTGCAGCCGTTCTCTCTCTTAAACAATGCATCATTTATTTTTTGGGATAAGGAAACACAACTTTCCATTTATTCACCCCTGCTTTCTTCAAGTACTCAATAAGTACACTCTAAGCTTAACTTTTCATTTGAACATTAAGATCCACCCCATCCCAACTTGGAACCGTGGTATTAAAAGATAGGCAAGATGATTTAGGTCTGCATCCATTGTTGTTCTTCAGATTAATTTCGACTTTTAGTATGTGTCCGAAAGATTTTCTTGAACAAAGGACTATATTTTTGTAAGTTATGTATTTTTTAGACTGAATCCTATCTACCTGATTATAATATGCGAAAAGGTTGATGACAATTACGATTTAGTCTGTTATTTTCTATTAAGTTGTCTTTTGGATCATCTCCCCCTTCCTTTCTTCTGAAACATTGCCAGAGTTGGAGTCTGACTTGTTCATTGTCTTGCGTATTAGTTTTATTTTATTTTATTTATTATTAGTATTATTATTTTAAAGTACACTTATGGATTTGTTTTTAAATGTATGGTATTTGATTCAGTCGGTAATAGTGCCAACCGTATGCTATCTAAAAATAATGGGAAGCGAAGCTACAAAGATGCAGGTAAGCATATTTTTAACGTAATTATTCCTTAGTTTTCTTTTTTTAAAGAAGTATTTATTCTCTTTTCAATAAATGCTACTATTTCTAATGATTTTGTTTTTAGTTTTATGTCTTTGAAATATGTACCTATTTCTTCCTATTTTTCTTATCCTGTATGTGCTTTTGACATTTCTTAAAAATGCATTTGGATTCTTAGTCAAATTAAAAAATCAAAATGAGTTTTTAAAAACTAAAACCCTATTTGATAACAATTTCATTTTTAGATGTGTTTTTGAATTTGTGGCTATTTCCTCTCTTTTTTCTTATGGTAGTTTTAACTTCTAAAAGAAATACTTGAATTTCTTTTTAAATTATAAAAATAGAAACAAGTTTTTGAAAACTATGATCCGTTTGGCAACTATTTGGTTTTTGGTTTTTAGTTTTTAAAAATTAAGCTTATAAACAATCTTTCCACCTCTAAAATTTTTGCTTTGTTGTTTACGTTTCTACTAATGTTTTTAAAAACTAGCTAAGTTTTGAAAACTGAAAAAAAATAGTTTTTTTCTTTGGAATTTGGTTAAGAGTTCAATTTTTTTACCTAAGAAAGATACAAACAATGGTAAGAAATTGTGAGAAAATAAACTTAATTTTTGAAAAACTAAAAATCGAATGGTTACCAAATATGGTCTACTTTTTTTAGTTTTCAAAACTTAGCTTGGTTTCTTAAGCATTACTAGAGAATGGATAATAGAACAAAGAAACTTATGAGTAGTGTTTATAAGTTTATGTAGAATTAGGGTTTATAATCCTTCCAAATGTTATCAAATGAGAAATATTTTTATTAGTTTCAAAACTTTGACTTGAGTCTTTTAAAAAATTGGTTGAGTGTGGATATATAGCAAAACAAAGAAATTTATCCATGGAAGTAATTTATCAGTTATTGCTTTTTGGTTTTTGAAAATTAATCCTATAAAATAATACTACACTCTTTTTGCCTATAAGCCCTGTTTTGTTGTCTAAGAAGTCCAATTTTCAAAAATAGAAAATGAAAACGGAGCTGCTTATCAAACAAAGCCGAACTTTTCACTGTATACGATCATATAGTCTTGCATTTCTCCTAACTTAATAAAAAAGGAACGTTTTCATAGAAGTGTCTTTGATTTTGATTTCACTATGAAGATTTCATATTCTGTCAAAATATGTTAAATGAAATATTAGTGCTTACCTTTACATTTTTTATGCTTTATTCTCCTTTTCCATGAAATTAGATCACTTCAAGCATCTTCGTCGTTGGACTTGGCATTGTTAGTACAATCTTGGGAACGTATTCTTCTCTGTCACGGATTGCAGAGAGTTACTGA

mRNA sequence

ATGTTTGGACCAATGATTGAATTTGCTTCCTTGACATTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTGCCTCCTAGAATTTCAAGTAGCTATGGGTGTTTTATTCTTCTAAGAACAGCCCTTGTTGCTTCTTCTGTTTGCGTGGCTTTCCTTCTGCCCTTTTTCGATGAATTGAGTGTAATTGGAAGTAAGTTGGCATTTATGTTGATTGTAGGTCTTGTGATGGCTTTGATTGGCTCTCTTCTCAGCATACTTGTGTCGGTAATAGTGCCAACCGTATGCTATCTAAAAATAATGGGAAGCGAAGCTACAAAGATGCAGATCACTTCAAGCATCTTCGTCGTTGGACTTGGCATTGTTAGTACAATCTTGGGAACGTATTCTTCTCTGTCACGGATTGCAGAGAGTTACTGA

Coding sequence (CDS)

ATGTTTGGACCAATGATTGAATTTGCTTCCTTGACATTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTGCCTCCTAGAATTTCAAGTAGCTATGGGTGTTTTATTCTTCTAAGAACAGCCCTTGTTGCTTCTTCTGTTTGCGTGGCTTTCCTTCTGCCCTTTTTCGATGAATTGAGTGTAATTGGAAGTAAGTTGGCATTTATGTTGATTGTAGGTCTTGTGATGGCTTTGATTGGCTCTCTTCTCAGCATACTTGTGTCGGTAATAGTGCCAACCGTATGCTATCTAAAAATAATGGGAAGCGAAGCTACAAAGATGCAGATCACTTCAAGCATCTTCGTCGTTGGACTTGGCATTGTTAGTACAATCTTGGGAACGTATTCTTCTCTGTCACGGATTGCAGAGAGTTACTGA

Protein sequence

MFGPMIEFASLTLLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGTYSSLSRIAESY

Homology

[Close]

BLAST of Clc10G15660 vs. NCBI nr
Match: KGN59445.1 (hypothetical protein Csa_000748 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 2.2e-46
Identity = 114/141 (80.85%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 5   MIEFASLTLLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFD 64
           MIEFASLTLLKYALLMNPLARSIEELLPPRIS+SYGCFILLRTALVASSVCVAF+LPFF 
Sbjct: 1   MIEFASLTLLKYALLMNPLARSIEELLPPRISASYGCFILLRTALVASSVCVAFILPFF- 60

Query: 65  ELSVIGSKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVG 124
                          GLVM+LIGSLLSILVSVIVPT+CYLKIMGS+ATK+QITSSI VVG
Sbjct: 61  ---------------GLVMSLIGSLLSILVSVIVPTMCYLKIMGSDATKIQITSSIVVVG 120

Query: 125 LGIVSTILGTYSSLSRIAESY 146
           LGIVS I+GTYSSLS+IA+SY
Sbjct: 121 LGIVSAIMGTYSSLSKIAKSY 125

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BLAST of Clc10G15660 vs. NCBI nr
Match: XP_008443262.1 (PREDICTED: vacuolar amino acid transporter 1-like isoform X1 [Cucumis melo] >XP_008443263.1 PREDICTED: vacuolar amino acid transporter 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 2.5e-42
Identity = 105/131 (80.15%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYALLMNPLARSIEELLPPRIS+SYGCFILLRTALVASSVCVAFLLPFF           
Sbjct: 425 KYALLMNPLARSIEELLPPRISASYGCFILLRTALVASSVCVAFLLPFF----------- 484

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVM+LIGSLLSILVSVIVPT+CYLKIMGS+ATK+ ITSSIFVVG+GIVS I+GT
Sbjct: 485 -----GLVMSLIGSLLSILVSVIVPTICYLKIMGSDATKIHITSSIFVVGIGIVSAIMGT 539

Query: 135 YSSLSRIAESY 146
           YSSLSRIA+SY
Sbjct: 545 YSSLSRIAKSY 539

[Close]

BLAST of Clc10G15660 vs. NCBI nr
Match: XP_011652187.1 (amino acid transporter AVT1A isoform X1 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41
Identity = 104/131 (79.39%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYALLMNPLARSIEELLPPRIS+SYGCFILLRTALVASSVCVAF+LPFF           
Sbjct: 425 KYALLMNPLARSIEELLPPRISASYGCFILLRTALVASSVCVAFILPFF----------- 484

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVM+LIGSLLSILVSVIVPT+CYLKIMGS+ATK+QITSSI VVGLGIVS I+GT
Sbjct: 485 -----GLVMSLIGSLLSILVSVIVPTMCYLKIMGSDATKIQITSSIVVVGLGIVSAIMGT 539

Query: 135 YSSLSRIAESY 146
           YSSLS+IA+SY
Sbjct: 545 YSSLSKIAKSY 539

[Close]

BLAST of Clc10G15660 vs. NCBI nr
Match: XP_031738577.1 (amino acid transporter AVT1A isoform X2 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41
Identity = 104/131 (79.39%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYALLMNPLARSIEELLPPRIS+SYGCFILLRTALVASSVCVAF+LPFF           
Sbjct: 352 KYALLMNPLARSIEELLPPRISASYGCFILLRTALVASSVCVAFILPFF----------- 411

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVM+LIGSLLSILVSVIVPT+CYLKIMGS+ATK+QITSSI VVGLGIVS I+GT
Sbjct: 412 -----GLVMSLIGSLLSILVSVIVPTMCYLKIMGSDATKIQITSSIVVVGLGIVSAIMGT 466

Query: 135 YSSLSRIAESY 146
           YSSLS+IA+SY
Sbjct: 472 YSSLSKIAKSY 466

[Close]

BLAST of Clc10G15660 vs. NCBI nr
Match: XP_022941270.1 (amino acid transporter AVT1A-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-40
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 4   PMIEFASLTLLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFF 63
           PMIE ASLTLLKYALLMNPLARSIEELLP RIS+S+ CFILLRTALV SSVCVAFLLPFF
Sbjct: 424 PMIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFF 483

Query: 64  DELSVIGSKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVV 123
                           GLVMALIGSLLSIL++VIVP VC+LKIMG EA+KMQ+T S F++
Sbjct: 484 ----------------GLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFII 543

Query: 124 GLGIVSTILGTYSSLSRIAESY 146
           GLG++S I GTYSS+S+IAESY
Sbjct: 544 GLGVLSAIFGTYSSVSQIAESY 549

[Close]

BLAST of Clc10G15660 vs. ExPASy Swiss-Prot
Match: O80668 (Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 5.9e-31
Identity = 77/131 (58.78%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYALLMNPLARSIEELLP R+S +  CF+LLRTALVASSVC AFL+PFF           
Sbjct: 421 KYALLMNPLARSIEELLPERMSENIWCFLLLRTALVASSVCSAFLIPFF----------- 480

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GL+MALIGSLLSILV++I+P +C++KIMG++AT+ Q+  S  +V +G+VS  LGT
Sbjct: 481 -----GLMMALIGSLLSILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGT 535

Query: 135 YSSLSRIAESY 146
           YSS+++I  +Y
Sbjct: 541 YSSVAKIIRNY 535

[Close]

BLAST of Clc10G15660 vs. ExPASy Swiss-Prot
Match: F4IUW3 (Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-15
Identity = 51/129 (39.53%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYAL ++P+A S+EEL+P R   S+   I +RT LV S++ V   +PFF           
Sbjct: 434 KYALTISPVAMSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFF----------- 493

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVM+LIGSLL++LV++I+P  C+L I+  + T  Q+   + ++ +G +S+++G+
Sbjct: 494 -----GLVMSLIGSLLTMLVTLILPPACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGS 546

Query: 135 YSSLSRIAE 144
           YS+LS+I E
Sbjct: 554 YSALSKIVE 546

[Close]

BLAST of Clc10G15660 vs. ExPASy Swiss-Prot
Match: F4JE35 (Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-15
Identity = 49/129 (37.98%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYAL ++P+A S+EEL+P     S    I +R+AL  S++ V   +PFF           
Sbjct: 424 KYALTLSPVAMSLEELIPSNYGKSRFYAIAIRSALAISTLLVGLAIPFF----------- 483

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVM+LIGS L++L+++I+P  C+L I+  + T  Q+T  I ++ +G V +++GT
Sbjct: 484 -----GLVMSLIGSFLTMLITLILPPACFLSILRKKVTPTQVTICILIMTVGAVCSVIGT 536

Query: 135 YSSLSRIAE 144
           YS+L++I E
Sbjct: 544 YSALAKIIE 536

[Close]

BLAST of Clc10G15660 vs. ExPASy Swiss-Prot
Match: Q8GYS4 (Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-14
Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 13  LLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSK 72
           + KYAL + P+  S+EEL+P     S G  IL RT LV S++ VA  +PFF         
Sbjct: 432 MTKYALTITPIVMSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFF--------- 491

Query: 73  LAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTIL 132
                   +V ALIGS L++LV++I P +CYL I+  + +  QI   IF++  G+VS   
Sbjct: 492 -------AIVAALIGSFLAMLVALIFPCLCYLSILKGKLSNTQIGLCIFIIVFGVVSGCC 545

Query: 133 GTYSSLSRIA 143
           GTYS++SR+A
Sbjct: 552 GTYSAISRLA 545

[Close]

BLAST of Clc10G15660 vs. ExPASy Swiss-Prot
Match: Q8LPF4 (Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-12
Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 13  LLKYALLMNPLARSIEELLP--PRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIG 72
           + KYAL + P+  S+EEL+P   R   S G  +L RT LV S++ VA  +PFF       
Sbjct: 407 MTKYALTITPVMLSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFF------- 466

Query: 73  SKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVST 132
                      V ALIGS +++L+++I P +CY+ IM    T  QI   I +V +GIVS 
Sbjct: 467 ---------ATVAALIGSFIAMLIALIFPCLCYISIMKGRLTNFQIGICILIVIIGIVSG 521

Query: 133 ILGTYSSLSRI 142
             GTYS+++R+
Sbjct: 527 CCGTYSAIARL 521

[Close]

BLAST of Clc10G15660 vs. ExPASy TrEMBL
Match: A0A0A0LBQ3 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G820510 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.0e-46
Identity = 114/141 (80.85%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 5   MIEFASLTLLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFD 64
           MIEFASLTLLKYALLMNPLARSIEELLPPRIS+SYGCFILLRTALVASSVCVAF+LPFF 
Sbjct: 1   MIEFASLTLLKYALLMNPLARSIEELLPPRISASYGCFILLRTALVASSVCVAFILPFF- 60

Query: 65  ELSVIGSKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVG 124
                          GLVM+LIGSLLSILVSVIVPT+CYLKIMGS+ATK+QITSSI VVG
Sbjct: 61  ---------------GLVMSLIGSLLSILVSVIVPTMCYLKIMGSDATKIQITSSIVVVG 120

Query: 125 LGIVSTILGTYSSLSRIAESY 146
           LGIVS I+GTYSSLS+IA+SY
Sbjct: 121 LGIVSAIMGTYSSLSKIAKSY 125

[Close]

BLAST of Clc10G15660 vs. ExPASy TrEMBL
Match: A0A1S3B7N4 (vacuolar amino acid transporter 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486887 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.2e-42
Identity = 105/131 (80.15%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYALLMNPLARSIEELLPPRIS+SYGCFILLRTALVASSVCVAFLLPFF           
Sbjct: 425 KYALLMNPLARSIEELLPPRISASYGCFILLRTALVASSVCVAFLLPFF----------- 484

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVM+LIGSLLSILVSVIVPT+CYLKIMGS+ATK+ ITSSIFVVG+GIVS I+GT
Sbjct: 485 -----GLVMSLIGSLLSILVSVIVPTICYLKIMGSDATKIHITSSIFVVGIGIVSAIMGT 539

Query: 135 YSSLSRIAESY 146
           YSSLSRIA+SY
Sbjct: 545 YSSLSRIAKSY 539

[Close]

BLAST of Clc10G15660 vs. ExPASy TrEMBL
Match: A0A6J1FT41 (amino acid transporter AVT1A-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446608 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.0e-41
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 4   PMIEFASLTLLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFF 63
           PMIE ASLTLLKYALLMNPLARSIEELLP RIS+S+ CFILLRTALV SSVCVAFLLPFF
Sbjct: 424 PMIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFF 483

Query: 64  DELSVIGSKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVV 123
                           GLVMALIGSLLSIL++VIVP VC+LKIMG EA+KMQ+T S F++
Sbjct: 484 ----------------GLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFII 543

Query: 124 GLGIVSTILGTYSSLSRIAESY 146
           GLG++S I GTYSS+S+IAESY
Sbjct: 544 GLGVLSAIFGTYSSVSQIAESY 549

[Close]

BLAST of Clc10G15660 vs. ExPASy TrEMBL
Match: A0A6J1I7V6 (amino acid transporter AVT1A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469988 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 4   PMIEFASLTLLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFF 63
           PMIE ASLTLLKYALLMNPLARSIEELLP RIS+S+ CFILLRTALV SSVCVAFLLPFF
Sbjct: 424 PMIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFF 483

Query: 64  DELSVIGSKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVV 123
                           GLVMALIGSLLSIL++VIVP VC+LKIMG EA+KMQ+T S F++
Sbjct: 484 ----------------GLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFII 543

Query: 124 GLGIVSTILGTYSSLSRIAESY 146
           GLG++S I GTYSS+S+IA+SY
Sbjct: 544 GLGVLSAIFGTYSSVSQIAQSY 549

[Close]

BLAST of Clc10G15660 vs. ExPASy TrEMBL
Match: A0A6J1D210 (amino acid transporter AVT1A-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016632 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.2e-36
Identity = 97/131 (74.05%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYALLMNPLARSIEELLP RIS SY CFILLRT LVASSV VAFLLPFF           
Sbjct: 423 KYALLMNPLARSIEELLPTRISDSYWCFILLRTTLVASSVFVAFLLPFF----------- 482

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVMALIGS LSILV+VI+PT+C+LKIMG EATKMQITSSI V+GLGI S  LGT
Sbjct: 483 -----GLVMALIGSFLSILVAVIIPTMCFLKIMGREATKMQITSSITVIGLGIASATLGT 537

Query: 135 YSSLSRIAESY 146
           YSSLS IA+SY
Sbjct: 543 YSSLSEIADSY 537

[Close]

BLAST of Clc10G15660 vs. TAIR 10
Match: AT2G41190.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 135.2 bits (339), Expect = 4.2e-32
Identity = 77/131 (58.78%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYALLMNPLARSIEELLP R+S +  CF+LLRTALVASSVC AFL+PFF           
Sbjct: 421 KYALLMNPLARSIEELLPERMSENIWCFLLLRTALVASSVCSAFLIPFF----------- 480

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GL+MALIGSLLSILV++I+P +C++KIMG++AT+ Q+  S  +V +G+VS  LGT
Sbjct: 481 -----GLMMALIGSLLSILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGT 535

Query: 135 YSSLSRIAESY 146
           YSS+++I  +Y
Sbjct: 541 YSSVAKIIRNY 535

[Close]

BLAST of Clc10G15660 vs. TAIR 10
Match: AT2G39130.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 82.0 bits (201), Expect = 4.2e-16
Identity = 51/129 (39.53%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 15  KYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSKLA 74
           KYAL ++P+A S+EEL+P R   S+   I +RT LV S++ V   +PFF           
Sbjct: 434 KYALTISPVAMSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFF----------- 493

Query: 75  FMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTILGT 134
                GLVM+LIGSLL++LV++I+P  C+L I+  + T  Q+   + ++ +G +S+++G+
Sbjct: 494 -----GLVMSLIGSLLTMLVTLILPPACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGS 546

Query: 135 YSSLSRIAE 144
           YS+LS+I E
Sbjct: 554 YSALSKIVE 546

[Close]

BLAST of Clc10G15660 vs. TAIR 10
Match: AT5G02180.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 13  LLKYALLMNPLARSIEELLPPRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGSK 72
           + KYAL + P+  S+EEL+P     S G  IL RT LV S++ VA  +PFF         
Sbjct: 432 MTKYALTITPIVMSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFF--------- 491

Query: 73  LAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTIL 132
                   +V ALIGS L++LV++I P +CYL I+  + +  QI   IF++  G+VS   
Sbjct: 492 -------AIVAALIGSFLAMLVALIFPCLCYLSILKGKLSNTQIGLCIFIIVFGVVSGCC 545

Query: 133 GTYSSLSRIA 143
           GTYS++SR+A
Sbjct: 552 GTYSAISRLA 545

[Close]

BLAST of Clc10G15660 vs. TAIR 10
Match: AT3G09340.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-13
Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 0


Query: 13  LLKYALLMNPLARSIEELLPP-RISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIGS 72
           + KYAL + P+   +EEL+PP     SYG  I ++T LV S++ VA   PFF        
Sbjct: 406 MTKYALALTPIVLGLEELMPPSEKMRSYGVSIFIKTILVLSTLVVALTFPFF-------- 465

Query: 73  KLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVSTI 132
                    ++ AL+GS L+ LV  I P +CYL I+    +K QI   +F++  GIVS  
Sbjct: 466 --------AIMGALMGSFLATLVDFIFPCLCYLSILKGRLSKTQIGICVFIIISGIVSGC 519

Query: 133 LGTYSSLSRI 142
            GTYS++ R+
Sbjct: 526 CGTYSAIGRL 519

[Close]

BLAST of Clc10G15660 vs. TAIR 10
Match: AT5G02170.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-13
Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 13  LLKYALLMNPLARSIEELLP--PRISSSYGCFILLRTALVASSVCVAFLLPFFDELSVIG 72
           + KYAL + P+  S+EEL+P   R   S G  +L RT LV S++ VA  +PFF       
Sbjct: 407 MTKYALTITPVMLSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFF------- 466

Query: 73  SKLAFMLIVGLVMALIGSLLSILVSVIVPTVCYLKIMGSEATKMQITSSIFVVGLGIVST 132
                      V ALIGS +++L+++I P +CY+ IM    T  QI   I +V +GIVS 
Sbjct: 467 ---------ATVAALIGSFIAMLIALIFPCLCYISIMKGRLTNFQIGICILIVIIGIVSG 521

Query: 133 ILGTYSSLSRI 142
             GTYS+++R+
Sbjct: 527 CCGTYSAIARL 521

The following BLAST results are available for this feature:

BLAST of Clc10G15660 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59445.1	2.2e-46	80.85	hypothetical protein Csa_000748 [Cucumis sativus]	[more]
XP_008443262.1	2.5e-42	80.15	PREDICTED: vacuolar amino acid transporter 1-like isoform X1 [Cucumis melo] >XP_...	[more]
XP_011652187.1	1.6e-41	79.39	amino acid transporter AVT1A isoform X1 [Cucumis sativus]	[more]
XP_031738577.1	1.6e-41	79.39	amino acid transporter AVT1A isoform X2 [Cucumis sativus]	[more]
XP_022941270.1	1.0e-40	72.54	amino acid transporter AVT1A-like isoform X3 [Cucurbita moschata]	[more]

BLAST of Clc10G15660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80668	5.9e-31	58.78	Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2	[more]
F4IUW3	6.0e-15	39.53	Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1	[more]
F4JE35	7.8e-15	37.98	Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2	[more]
Q8GYS4	1.7e-14	40.77	Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1	[more]
Q8LPF4	8.1e-12	38.93	Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1	[more]

BLAST of Clc10G15660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBQ3	1.0e-46	80.85	Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G820510 PE...	[more]
A0A1S3B7N4	1.2e-42	80.15	vacuolar amino acid transporter 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1FT41	5.0e-41	72.54	amino acid transporter AVT1A-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I7V6	1.1e-40	71.83	amino acid transporter AVT1A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1D210	2.2e-36	74.05	amino acid transporter AVT1A-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Clc10G15660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41190.1	4.2e-32	58.78	Transmembrane amino acid transporter family protein	[more]
AT2G39130.1	4.2e-16	39.53	Transmembrane amino acid transporter family protein	[more]
AT5G02180.1	1.2e-15	40.77	Transmembrane amino acid transporter family protein	[more]
AT3G09340.1	5.7e-13	37.69	Transmembrane amino acid transporter family protein	[more]
AT5G02170.1	5.7e-13	38.93	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 14..142
None	No IPR available	PANTHER	PTHR48017:SF185	BNAA03G19350D PROTEIN	coord: 14..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G15660.2	Clc10G15660.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015293	symporter activity