Clc10G15610 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCAAACCATCGAGTGCGAAACGCTATTATTCAACGTTTCCACTCTTGTCGTGTCCTTGCAGGAAAGAGGTTTCTTCGGTAACATAAGATTAAATTGTAAGAAAATCATACGGTTAATTCTTGTTTGATCTGCAAAATCTCGGTATCTTCTTTCTTTGGTTAGATCTTTTCGTCGACGATTGACATAGAAAGCAAGAGAACCCCATGATCAATATTTTGATGGTCAATTATTGCAGCCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCTCTGGTGGTGCCGCCGCTTCCTCCTCCACCGTTGGCGGTTCTCAGCTTGCCGGTTTTGTTATTGGCTGTTTTGTTGTTGTTGGCTTTCTCTTCTTCCCGTCGGATCCCCAACATTGCTGCTGAGGTGATGCAATAA ATGGTGCAAACCATCGAGTGCGAAACGCTATTATTCAACGTTTCCACTCTTGTCGTGTCCTTGCAGGAAAGAGGTTTCTTCGGTAACATAAGATTAAATTGTAAGAAAATCATACGCCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCTCTGGTGGTGCCGCCGCTTCCTCCTCCACCGTTGGCGGTTCTCAGCTTGCCGGTTTTGTTATTGGCTGTTTTGTTGTTGTTGGCTTTCTCTTCTTCCCGTCGGATCCCCAACATTGCTGCTGAGGTGATGCAATAA ATGGTGCAAACCATCGAGTGCGAAACGCTATTATTCAACGTTTCCACTCTTGTCGTGTCCTTGCAGGAAAGAGGTTTCTTCGGTAACATAAGATTAAATTGTAAGAAAATCATACGCCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCTCTGGTGGTGCCGCCGCTTCCTCCTCCACCGTTGGCGGTTCTCAGCTTGCCGGTTTTGTTATTGGCTGTTTTGTTGTTGTTGGCTTTCTCTTCTTCCCGTCGGATCCCCAACATTGCTGCTGAGGTGATGCAATAA MVQTIECETLLFNVSTLVVSLQERGFFGNIRLNCKKIIRLSSVMVLLVWTASLLLLPLVVPPLPPPPLAVLSLPVLLLAVLLLLAFSSSRRIPNIAAEVMQ Homology
BLAST of Clc10G15610 vs. NCBI nr
Match: TQE05894.1 (hypothetical protein C1H46_008577 [Malus baccata]) HSP 1 Score: 58.2 bits (139), Expect = 4.9e-05 Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Clc10G15610 vs. NCBI nr
Match: XP_022849189.1 (protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE [Olea europaea var. sylvestris]) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04 Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Clc10G15610 vs. NCBI nr
Match: QHO44850.1 (uncharacterized protein DS421_6g174230 [Arachis hypogaea]) HSP 1 Score: 55.8 bits (133), Expect = 2.4e-04 Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of Clc10G15610 vs. NCBI nr
Match: QHN84568.1 (uncharacterized protein DS421_16g529750 [Arachis hypogaea]) HSP 1 Score: 55.8 bits (133), Expect = 2.4e-04 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of Clc10G15610 vs. NCBI nr
Match: CAA3019299.1 (AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE [Olea europaea subsp. europaea]) HSP 1 Score: 55.1 bits (131), Expect = 4.2e-04 Identity = 32/55 (58.18%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 2.5e-04 Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.3e-04 Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy Swiss-Prot
Match: Q8RWS1 (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.3e-04 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy TrEMBL
Match: A0A540N4D3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_008577 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.4e-05 Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy TrEMBL
Match: A0A5B7AL58 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.0e-05 Identity = 32/60 (53.33%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy TrEMBL
Match: M5VSM6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa014424mg PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.5e-04 Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy TrEMBL
Match: A0A2R6RY82 (Biotin synthase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03950 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-04 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Clc10G15610 vs. ExPASy TrEMBL
Match: A0A1S3Z0B8 (ARGOS-like protein OS=Nicotiana tabacum OX=4097 GN=LOC107781668 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.4e-04 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of Clc10G15610 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like ) HSP 1 Score: 45.8 bits (107), Expect = 2.3e-05 Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of Clc10G15610 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 2.3e-05 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Clc10G15610 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size ) HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04 Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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