Clc10G15080 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAAAGAAAAAAAGCAACCCGTCAAAAGAAAAGGGTAGTTTGGGAATGGAAAATTTCAAAAGAAAAACAATAGCCTATTTGAAAGAAGCAAGATCCTTTTTTTTTTTTTTTTTCAAGTCAACGGATCAAAAAAGAAAATCAACACTAGCCTTTATTTCCTCCCATTTGATCTATATATTTAGCCTCCTTCAAGCTCGGAAGAGAAGAAAAAAAAAATATATATATATATACACACATTTTATAGATCCAATGTCAAATGAGACGAAACCTAAAGTGTGTGTTGTATTGGTGACATCCATGGATACTTCATCAAGCTTGAGAAGCTATGGCGAAATCTCGAGTTGGCAATTGGGGCCTCTGAGTTTGCCTCCACGATCGTCATCTTCTTGGGAGATTGCTACGATAGAGGGTTGAATTCTCGTGAAGTGATTCAGTTCTTGGTCTCACTGTCTTTCAGGTACTAA ATGACAAAAGAAAAAAAGCAACCCGTCAAAAGAAAAGGTGTGTGTTGTATTGGTGACATCCATGGATACTTCATCAAGCTTGAGAAGCTATGGCGAAATCTCGAGTTGGCAATTGGGGCCTCTGAGTTTGCCTCCACGATCGTCATCTTCTTGGGAGATTGCTACGATAGAGGGTTGAATTCTCGTGAAGTGATTCAGTTCTTGGTCTCACTGTCTTTCAGGTACTAA ATGACAAAAGAAAAAAAGCAACCCGTCAAAAGAAAAGGTGTGTGTTGTATTGGTGACATCCATGGATACTTCATCAAGCTTGAGAAGCTATGGCGAAATCTCGAGTTGGCAATTGGGGCCTCTGAGTTTGCCTCCACGATCGTCATCTTCTTGGGAGATTGCTACGATAGAGGGTTGAATTCTCGTGAAGTGATTCAGTTCTTGGTCTCACTGTCTTTCAGGTACTAA MTKEKKQPVKRKGVCCIGDIHGYFIKLEKLWRNLELAIGASEFASTIVIFLGDCYDRGLNSREVIQFLVSLSFRY Homology
BLAST of Clc10G15080 vs. NCBI nr
Match: XP_038906159.1 (tyrosine-protein phosphatase At3g09960-like isoform X2 [Benincasa hispida]) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Clc10G15080 vs. NCBI nr
Match: XP_038906158.1 (tyrosine-protein phosphatase RLPH2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Clc10G15080 vs. NCBI nr
Match: XP_004136672.1 (tyrosine-protein phosphatase RLPH2 [Cucumis sativus] >KGN59508.1 hypothetical protein Csa_001223 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Clc10G15080 vs. NCBI nr
Match: XP_008443340.1 (PREDICTED: uncharacterized protein LOC103486951 [Cucumis melo] >KAA0053813.1 uncharacterized protein E6C27_scaffold135G001990 [Cucumis melo var. makuwa]) HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20 Identity = 55/75 (73.33%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Clc10G15080 vs. NCBI nr
Match: TYK25588.1 (Serine/threonine-protein phosphatase PP1-2 [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 3.4e-19 Identity = 53/71 (74.65%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy Swiss-Prot
Match: Q9SR62 (Tyrosine-protein phosphatase RLPH2 OS=Arabidopsis thaliana OX=3702 GN=RLPH2 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.0e-14 Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy Swiss-Prot
Match: Q8LEC0 (Tyrosine-protein phosphatase At3g09960 OS=Arabidopsis thaliana OX=3702 GN=At3g09960 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.9e-13 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy Swiss-Prot
Match: Q9LHE7 (Phytochrome-associated serine/threonine-protein phosphatase 3 OS=Arabidopsis thaliana OX=3702 GN=FYPP3 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 8.4e-05 Identity = 29/69 (42.03%), Postives = 33/69 (47.83%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy Swiss-Prot
Match: Q8LSN3 (Phytochrome-associated serine/threonine-protein phosphatase OS=Pisum sativum OX=3888 GN=FYPP PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 8.4e-05 Identity = 29/69 (42.03%), Postives = 33/69 (47.83%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy Swiss-Prot
Match: Q9SX52 (Phytochrome-associated serine/threonine-protein phosphatase 1 OS=Arabidopsis thaliana OX=3702 GN=FYPP1 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.2e-04 Identity = 28/69 (40.58%), Postives = 33/69 (47.83%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy TrEMBL
Match: A0A0A0LCN8 (Metallophos domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G823070 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.1e-21 Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy TrEMBL
Match: A0A5A7UD04 (Metallophos domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001990 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20 Identity = 55/75 (73.33%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy TrEMBL
Match: A0A1S3B7U7 (uncharacterized protein LOC103486951 OS=Cucumis melo OX=3656 GN=LOC103486951 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20 Identity = 55/75 (73.33%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy TrEMBL
Match: A0A5D3DPW7 (Serine/threonine-protein phosphatase PP1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007470 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 53/71 (74.65%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of Clc10G15080 vs. ExPASy TrEMBL
Match: A0A6J1J0Z3 (uncharacterized protein LOC111481700 OS=Cucurbita maxima OX=3661 GN=LOC111481700 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.2e-16 Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 0
BLAST of Clc10G15080 vs. TAIR 10
Match: AT3G09970.1 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15 Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of Clc10G15080 vs. TAIR 10
Match: AT3G09960.1 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 3.5e-14 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Clc10G15080 vs. TAIR 10
Match: AT3G19980.1 (flower-specific, phytochrome-associated protein phosphatase 3 ) HSP 1 Score: 47.4 bits (111), Expect = 6.0e-06 Identity = 29/69 (42.03%), Postives = 33/69 (47.83%), Query Frame = 0
BLAST of Clc10G15080 vs. TAIR 10
Match: AT1G50370.1 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 45.4 bits (106), Expect = 2.3e-05 Identity = 28/69 (40.58%), Postives = 33/69 (47.83%), Query Frame = 0
BLAST of Clc10G15080 vs. TAIR 10
Match: AT1G03445.1 (Serine/threonine protein phosphatase family protein ) HSP 1 Score: 40.8 bits (94), Expect = 5.6e-04 Identity = 23/70 (32.86%), Postives = 32/70 (45.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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