Clc10G13340 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G13340
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Peptide deformylase
Location	ClcChr10: 26948166 .. 26956238 (-)
RNA-Seq Expression	Clc10G13340
Synteny	Clc10G13340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGATTCATATCGTGTGATGCTTGTTTATAACCTTCATGGATTGTGTTCCACATACATAGCATCAGCAGTGGCCCGTAATTATAGTGAACCATGTATAAACTTCATGGATTTTGTATCTGGATCAGCAAGTCAGAGCTTTGGTCTGTTGCAAGAGTTCTATCAAACCACTTTGAAAGCCCTTGAAGAGCAAAGAATAAGGTAAGAAAATGATTCTACTTTTACCATTTCATGCATTCTTTAATCAAGTAGAGCCTTATGTTCTGTTGCTCTCTCGTGGTTTAGAGGCTTTGGTTCAAAACTAATTTAAATCTCTGCAAGATTAGGTTTGATACTGGTGAATATGTCGTTTTATTAAGTTAGCTTTATTTATTTTTTTTTTCCTGAAAGAGAATATTTAGTGTTTTATATTTATTTGCATGTTAAGGGATCAGATAAATTCATTTTCATATCTAGATTTTGAAGGAACTCCACAAGTCCTGTCAAAGAGAAGATGGTATGGAACTACAGATGATCTAAGAAAGGAAGTCAACTAATGGAGGTATATGCAATTGAGATTAAAAAATATACTGAGATTCTCTAGAATTCTTGTGCATTCCATTCTGAGTTACATGATATTGTGTAATTATAAATATCAAAACTGAGCAGAGGAACCCTTGAAAGATCTATAGTTTAAGCCACAGACGTAACAAAGGTATTTTTGCAGTCTCCTCTGTTAAGATCTCCCAACATAATGCTAAACTAAGAAGCACAGACACTTTAGTTTGGCTAGCATGTCTCCAACACTCTGACACTTGTTGGACACATATGGAACACTTGTTATTGCAACAAATGGGATAGACATGTATAGAACACTTGCTGAGTAGACTAAAAAGACACATATATGACATAATAATAACTTTTTATGTGTCAAATACATCAAACTAAGTTTTTTAAGCATATAAATGCATCAACGAATGTACTATGAATTTTCTTTTGGGATAGAAATGATATATATTTTTAAAATATGTATATTTTAATAAACGTGTCCTTGTTGTGTTGTATCCTAGATATTAAATATAATATGACATGCTATTTACCAGAATACTGAATTGAAAATTTAGAGACCTATTAGATATGAAGTTGAAAATTTAAAAGTTAATTTCTAACAAATAAAAAAAGTGATCTATGAGGCATTTTTTTCAAAGTTTTAGAGCAAATTCTATTCAGCTTATTTGAATTATAATATTTTTAGATAATAAAATTTGAAAACTATAAATTTCAAAAATAATTAAAATGTTAAATGTATCAAATATTTTCTAACATTTAAATATTTTTTAATTTTATATTGGGTCTCAATGTCTTACAATTCTCGATTCGACCTTTCCATAAATAATTGGTTAACTTTTGTTAACAAACTATAGATGTTTTAATTTTTGTTTTATTAACGTATTTTGTCATATGATATTCATTAATGTTATTTGACCTACTAAATTTAACTAACAAAATTTGAATTCTCAATTTGAATATACTTCCATTGATTTAAACATATATCTTGATTCAAGAGGTTAGACGTTTGAATTTTTCCAATTTTTCATAATAAAATTCATTTATTTCTAGTCACATGCAAAGAAAAGTTATAATGAAATAATAAAAGGACTTGATTGACAATTTTTAATATATTAGAGATTAAAATTAATCTATAATATATTAAAAGGTGAGAATGTAGGAGAAACTTTTTTTTTGAACACTTTTGTTATTTCTTTATTTTAGTTATTTGCATGGTATGTCATTATCAATTAAATATAAATAGTAAATTAATTAATTAATTTATAATTATCAATATTAAATATATAATCAATATTGTAATGTTAGAATGTAAAAAGTTGTTTACTTCCACATGAAATGTGGAAATAGTTTGATTTTTACTTTAATTATAGTTAATATTTGAATATTAAAAGTTTTAGAATTCAAATAATTTTTGTAATTCTCACCTTCAACTATAATAAAAATGGAGTTTTCTTAACATTTTTCACAAACACATGGAGTTTCGTTCTTTCTCCATTTTTTTCCTCTCAATTCATGTTTCTCAAAGTCTTTTCAATTTTTGAAGCATCTCAAGGTGTTGGTGTTATATCAAAGTTGCAAGACATGCATGTATCGAATCAAGATCTTGGATTCTAGAATTCTTCATTTTTTTTTTTTAATGAATGAATTTCAGGCTTTTGTTACTTTACTTTACAACTCCACTTTAATGAAACTGAATCTTAGCGTTTCTGTAGCAAGTGAGCAAATTTATAAGGAATGTGTATAGCTAAGGTTTTTTTTAAAATTTTATTATTATTATTATTATTATTTTTTTCCAATTATCAATTTCTCTTTTTATTGTTCTTTTAGAATTAGTGCATTAAAATGTTTGTTGGAAAAAACAAAAGTTTATCAATCAATTACAAGTTTGTGTTACTTTTGTTGAGTAAAAGAAATCTATGTAACGTCCTTATGCCTCACAACTTTTTTCTTATCAATTATAAGTAGCATATTAATCTCTTAAATAAATTATTGAAAAAAAAAGTAGGAATATTGCAACAAGATTTGTAAAATAAATTTTATTTCATGCTAAATCAAGTAACTGAACTAATTACATATTTCTAAAAAAGAAAAACTAATTACATCTTTATTGAGTTTGCAAATTTATTAGATCACAAAATTAGTTTGATTTTTTTTAAAAAAAAAGTAATTAAAAAAAGTTAATGATAGACAAAAATAACCTTAAAAGCAAATCCTTCAATATAATATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATAACCTTAAAAGCAAATCCTTCAATATAATATAATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTATTGAACATTAAAAACTATAAAATGTAACATAAATTTCTTAAAGAAATTGGTAGGAAATAACTTATGCAATTTTAATAGAATATGAAAAGTTATACCTCTACATAAATTATTCTAAAATTACAAATTTTCTAATCATATTTAATTATAAATATAAAAAATTTGGAACTTCAAAAGTTTTATAATTTTTTTCATTCTATTTAACCTTTTAAATATCTCGATTCCATTTATTTTTTAAATTATTTGAAAATAAATAAACTAATTTAGATATTATTTCTATTATTATAAAAAAAATGGCAAAACTATATATACAAAAACAAAACTAATTTGAAATATTTGGATACTTTATAATTTTAACTTTTTTAATTTAATAATAATTGGTTCTACTATTATATATTTACAATTACGCTTTTGTATTGGTATATAAATGTTTTGTTTATTTTTATAAATTTTTTATTTTCGATTATTATTATTTGATTGTGAAACTCTATAAATTTTAATTTATTTAAATTATTTAAACTCTTCAAAATAATGTAAATGATTTACATAACCTTATTTGTTCTCTCCCAATTACATTGTTTCTTTCTTTCATTCCTTTTTAAGAATAAAACTTATTTGAGTTTCTTTATTAATAACATGTTGGATGGAGACTTATAATTACATTTTCATTTTTTAATTTATTTAAATACTAAAATTCTACTATAATAATTTTTTTCGTTTTACTTATAACTTTTGATTGCATTGCTTACTACCGCATATGTTCTCTCTTTTATGGATATTTTTAGATTCTATTACAGTAACAGGAGAAAAACTATTTTATCAATATATCTTTACGTTTTTTTTTAATTTTAAATTGAAAAATAGGATCACTAATTGATTTAAATAACCCAAACTAATATCTTTCATTATTTTAAAATTTTTTAAAATGAATATTAGATATTAAAAAATAAACTATTATGTTAGATTAAAAAAAAAAGTAATTTGATATATTGAATATGACTAAAACATGGGGAAAAAGGTAATTTAGCCAATAGTGTTGTGTTGCAAAGCGGTGGTCCACTATGTTCTTTAGCGCCTCTTCTTTTATCTTGATTTTCCATTTTTTGTCTCATTTTTTTATTGATTTTGCAATTAAATCCCTAAATAATTTTCAAATGTTTCTCTAATCTTCAGCAAAATTACACATTTCGGGCCTACGGCACAACTTTTAGCCACAACCTTCTCCTTCGCAAAAGCTTGTGAGTCGTTATTCAACATCAGGCGTCCCTTGGCGCAGGTCTGCTCCTCACCGGTCCACCGTCCGCGGCCGTTCCGGCCGATTTACCGCCGCCATGGCTTACACTACTCGATTACACGTTTCTCTCTCACACGTTCTTCTTCCTACTGTACCCCGCCGGTTGGCTCTTCCCGCCGTCTTCCGCCGGCTGAGCGGTCTTCCCTCAACCGGCAAGTTCTTCTCCCATTTGAGTAAGTTCAGGCCTCCGTCAACTCTGGTTTACGCGCAGGCCAAACGAGGCTTCTCTGCCAAAGAAGACGATGTAGCTTCGTGTAAGGCTAAGCTCAAACCTCAAATTTCGTTTTGCAACTTGTAGTGCTATCTCTTTTCTATTATTATTTCTCAATTTTTCACTTAGTTTTATTTAATTTACTGAGAACACTCTGGTTTTTTAGCTATCGATCTTGAATTTGAGGCACCGCTCAAAATTGTGGAATATCCGGATTCAATACTTAGAGCAAAGAATAAGCGTATCGATTCATTTGATGATAATCTGAAGAAGTTGGTGTACGAAATGTTTGATGTAATGTATAAGTAAGTTCCTGAATTATCTTTTTTGTTCCAATTTCTTCTTCATTTCATCTTCATTGCCTCTGGTAATTGAGTGCCTTTACTTTTATCCTTTCATGAAAGAATGATGATATCTTTAGTCCAAGGATAAAACTTCTAAAAATGTTCCTAGCACTCTTGTCCTTCACTTGTGAGTTTCAAAATTAGCGCAAAATCAACCAGTAGTCTACCAACACAGTTACAAGATATGAATAAAGAAACTAGTACCAGCCTAAGACCATGTTAAACTTTTATTAAACCAAAAGACTACGGACGTGTTTGAGAGTGATTTTATAAAGGAGTGATTATAGTAAAAATGATTTGTTTACAAGTGATTTTTATATATTCATTTGAATGTTTAGTTTTACACTTTAAACACAATTTTTATATAACTAAAATTGATTTTGAATGATTCATAGCATGTTTGAGGGTAATTTTTAACATGAAAAAAGTGATTTTAACCATTTCAAAATTAATCTGGCCACCTAACTAGGATTTATACCCAAGTGTTGTAGAAACAAGCGGGTTGTTTCGTGAGATTAGTCGAGGTGCTCGCAACAGCTAAACACTTGCAAATATATATATATACTTTCAAACATGTCATAAGCTAATATTCTTAATAGGCAAGAATATGTTTTCAATAATCTTACCTTGAACTTTTGTATTCTGGATCTTTTATTGTTAGCTGAATCTGTTCAATCTGTTCTATGAAAAGCTTTTACCATGCATGAATGATGATTTCTGAGTTAGAGCCATTATTACCTTTTTATTTACAGGAAAGTGAACAATACTTGTTGGCTTCATTGTCCACAGAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTAATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGGGAGGAAATTGTTCTTGTAAACCCTAGAGTTTACAGATATTCCAAGAAAACTGTAGTCTTTAATGAAGGTTGCTTATCGTTCCCAAGGATATATGCTGATGTAGAGGTATTGTTGTATACTGGCTCTTATCTCTCACTGCCCAGTGCCTACTCTTTCTAGTTTGATGCTAATTAAGGTTGGCACCAAGTTTCTTTTTCTGCACTTAATATAACGTTTTCTTGGCTAATATAAATTCCAATTCGCTAATAAATGTTTTCAGTCAAAGCTTGCAAAAGCTTAGTTCGTTCTAATATAGGGTGTTGTCAGTTTGTTGAGTTGGTTTAAATTCTCTTTTTTGACTGCTACCTCCTTCTAAAGCTTACTACACCTTCTCCTTGAGTGCCTACAGTAAGTCAAACTCAAGGTTGATACTATTTTAAAGTTAACTCACAAGTTTAATCAAGTTATGTTTTATAGGACTTTAAACTTTAATTTTATTTCTTACGTCATTAAATTTTAATTTTAGAAGTGTTTATGTCTTAGAATTTTTAATTATGCCTAATAGATTTTTCAAAGACATTTTTAGTAGTTCACATGCCTCGTAAACACAAAATTAAAAGGTCAAAGTTTTATTAGATTGAAATTTTAATTTTGTAGCTAATATGCTGAGGTGTTTTAGAAATTGTACTCTACATCATAGACTACGCATGATTGAAGGTTCAAAGACCTATTGGACAAAAATTGAAAGTTTAAGGACTTATTGGACGCAATTGAAAATTTAGGGATCTGTTAGATACTTTTCGGGAACTTATTAGATACAACCCTAAAACTTTAGGGACCTAACTTATTCTTTACACCTATATTTGATACTGGTCAGGCCAATTAGCTGTTCTTCTAATGCTTTGTGGGAATTGAAATTTTAATATAGTTTCTCTAGTTGCGAAATGATGCTTGCTTTTAAGGACCACACAATTTCTAGCTATCAAATTCTGTTCTTTATTCTTTGAGTTGTGATTGTGATGAGCTAGTTCATTCTTTGGAAATTGCAGAGACCAGAATCAGTTAAGATTGATGCACGAGACATCAATGGTGCAAGGTTCATGGTCAACTTGTCAGGCCTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCACTTGCAGGTTTTTCGATTAGTACAAAATTTAAGTTATTATACATGACATTCCCTTTTACAACGTTTAATTTAACCGTGTCACGCACATTCTTTCACCCAAAGTTTGTTTTGAGCAACAATGCTCAAGTGGCATTCTAGTAGTGCTTGATTATTTTGGTCTGGATTCTTCGATAATATCCCCTAAGCATTTGGGTTAGCTCAAATTTGTTTCTAAGAGAAGTGTTAAATTTGCAGGGAACTTTGTTCTTTGACAGAATGACGGATGAAGTACTTGAGACGATTCGCCCTCAGCTGCAGGTGAGTGACCCCCTGCCGCCCATTGTTTCATCTTCTTTCTAATCCAAAGAAATGTCCTTGAACAGAAAGGCGTGGCATATTCTTATAACTTTTTTTTTTTTTTTTTTCTGTATAATCTTTTTTTAACGAGGGTTGAATAAACCATAATGGTGGATGACATAATTGGTCAAGTACAGTTGATCTAAAAAATATAGAGCTTAAAAGGAATGAGTTCAAGTCATGATCACCACTTAGCTAAGATTTAACATCCTACTAGTTTATGGGCAGCCCTAATGGTTAAGGAGTTGTCCTGTGAGAACAATCCTTTTGTGTGTAAGTTTGTCCAAAGTGTATATAAAATTCACTTGTCTAGTGACACTTAATTGATTGCTTAGGGTTCTATTATACATAAAATTTAAATTTATATATAACCGCTCAATTTATTTTGAAATTTTGAATTTTGTTAGGACCTTTTAGACACAAAATTCAAGGACATATTAGACACATTTATAAGCTCAGGGACTAAATAGACACAAACTTAAAAGTTGGTGAACTCTCCCTAAAATGCTCCACCCCTTCTAAGGTCCCTGGCACCCCTTATTTATAACCAAGACGCCACTAATTAATTACTACTATACCCTTACTAATATTATACTGAACTTATCTACATCCAGGGGAATGTAGAAGTAGAATGACATTTTTCTTTACAAGTCACTCAATCACAATTTTATGAAACAACTAGTCACTTAAAACAACTTCGAAAATAAAATTCGAAAAGTGATTTTTCTAGATTGAAAATGAATTGAGTTAAAGATGTTCTTTATTTGCTATTGATGCAGGCCCTAGAACAGAAGTACGAAGATAAAACTGGATTACCAAGTCCTGAAAGAATAGAGAACTTTAGAACAAGGAAGGTTGCTGCTGGTTTCGGGAAATCATGATCATAAATTATGAATAATATGAGTTCAACTAAATTTAATGAATTGTATGATATAAATAAATTTGATTTTGGTAG

mRNA sequence

ATGATGGATTCATATCGTGTGATGCTTGTTTATAACCTTCATGGATTGTGTTCCACATACATAGCATCAGCAGTGGCCCGTAATTATAGTGAACCATGTATAAACTTCATGGATTTTGTATCTGGATCAGCAAGTCAGAGCTTTGGTCTGTTGCAAGAGTTCTATCAAACCACTTTGAAAGCCCTTGAAGAGCAAAGAATAAGGAACTCCACAAGTCCTGTCAAAGAGAAGATGCCACAACCTTCTCCTTCGCAAAAGCTTGTGAGTCGTTATTCAACATCAGGCGTCCCTTGGCGCAGGTCTGCTCCTCACCGGTCCACCGTCCGCGGCCGTTCCGGCCGATTTACCGCCGCCATGGCTTACACTACTCGATTACACGTTTCTCTCTCACACGTTCTTCTTCCTACTGTACCCCGCCGGTTGGCTCTTCCCGCCGTCTTCCGCCGGCTGAGCGGTCTTCCCTCAACCGGCAAGTTCTTCTCCCATTTGAGTAAGTTCAGGCCTCCGTCAACTCTGGTTTACGCGCAGGCCAAACGAGGCTTCTCTGCCAAAGAAGACGATGTAGCTTCGTCTATCGATCTTGAATTTGAGGCACCGCTCAAAATTGTGGAATATCCGGATTCAATACTTAGAGCAAAGAATAAGCGTATCGATTCATTTGATGATAATCTGAAGAAGTTGGTGTACGAAATGTTTGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTAATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGGGAGGAAATTGTTCTTGTAAACCCTAGAGTTTACAGATATTCCAAGAAAACTGTAGTCTTTAATGAAGGTTGCTTATCGTTCCCAAGGATATATGCTGATGTAGAGAGACCAGAATCAGTTAAGATTGATGCACGAGACATCAATGGTGCAAGGTTCATGGTCAACTTGTCAGGCCTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCACTTGCAGGGAACTTTGTTCTTTGACAGAATGACGGATGAAGTACTTGAGACGATTCGCCCTCAGCTGCAGGCCCTAGAACAGAAGTACGAAGATAAAACTGGATTACCAAGTCCTGAAAGAATAGAGAACTTTAGAACAAGGAAGGTTGCTGCTGGTTTCGGGAAATCATGATCATAAATTATGAATAATATGAGTTCAACTAAATTTAATGAATTGTATGATATAAATAAATTTGATTTTGGTAG

Coding sequence (CDS)

ATGATGGATTCATATCGTGTGATGCTTGTTTATAACCTTCATGGATTGTGTTCCACATACATAGCATCAGCAGTGGCCCGTAATTATAGTGAACCATGTATAAACTTCATGGATTTTGTATCTGGATCAGCAAGTCAGAGCTTTGGTCTGTTGCAAGAGTTCTATCAAACCACTTTGAAAGCCCTTGAAGAGCAAAGAATAAGGAACTCCACAAGTCCTGTCAAAGAGAAGATGCCACAACCTTCTCCTTCGCAAAAGCTTGTGAGTCGTTATTCAACATCAGGCGTCCCTTGGCGCAGGTCTGCTCCTCACCGGTCCACCGTCCGCGGCCGTTCCGGCCGATTTACCGCCGCCATGGCTTACACTACTCGATTACACGTTTCTCTCTCACACGTTCTTCTTCCTACTGTACCCCGCCGGTTGGCTCTTCCCGCCGTCTTCCGCCGGCTGAGCGGTCTTCCCTCAACCGGCAAGTTCTTCTCCCATTTGAGTAAGTTCAGGCCTCCGTCAACTCTGGTTTACGCGCAGGCCAAACGAGGCTTCTCTGCCAAAGAAGACGATGTAGCTTCGTCTATCGATCTTGAATTTGAGGCACCGCTCAAAATTGTGGAATATCCGGATTCAATACTTAGAGCAAAGAATAAGCGTATCGATTCATTTGATGATAATCTGAAGAAGTTGGTGTACGAAATGTTTGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTAATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGGGAGGAAATTGTTCTTGTAAACCCTAGAGTTTACAGATATTCCAAGAAAACTGTAGTCTTTAATGAAGGTTGCTTATCGTTCCCAAGGATATATGCTGATGTAGAGAGACCAGAATCAGTTAAGATTGATGCACGAGACATCAATGGTGCAAGGTTCATGGTCAACTTGTCAGGCCTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCACTTGCAGGGAACTTTGTTCTTTGACAGAATGACGGATGAAGTACTTGAGACGATTCGCCCTCAGCTGCAGGCCCTAGAACAGAAGTACGAAGATAAAACTGGATTACCAAGTCCTGAAAGAATAGAGAACTTTAGAACAAGGAAGGTTGCTGCTGGTTTCGGGAAATCATGA

Protein sequence

MMDSYRVMLVYNLHGLCSTYIASAVARNYSEPCINFMDFVSGSASQSFGLLQEFYQTTLKALEEQRIRNSTSPVKEKMPQPSPSQKLVSRYSTSGVPWRRSAPHRSTVRGRSGRFTAAMAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAKRGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEQKYEDKTGLPSPERIENFRTRKVAAGFGKS

Homology

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BLAST of Clc10G13340 vs. NCBI nr
Match: XP_038904020.1 (peptide deformylase 1B, chloroplastic [Benincasa hispida])

HSP 1 Score: 507.7 bits (1306), Expect = 9.1e-140
Identity = 252/274 (91.97%), Postives = 260/274 (94.89%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           M YTTRLH+SL H LLPTV RRL+LPAVFRRLSG P TGKFFSH SKFRPPST+VYAQAK
Sbjct: 1   MEYTTRLHLSLQHALLPTVSRRLSLPAVFRRLSGFPLTGKFFSHWSKFRPPSTVVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFSAKEDDVA S+DLEFEAPLKIVEYPD ILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSAKEDDVAKSVDLEFEAPLKIVEYPDKILRAKNKRIDSFDDNLKKLVREMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTV+FNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPMIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DVERPESVKIDARDI+G RFM NLSGLPARVFQHEFDHLQG LFFDRMTDEVL+TIRPQL
Sbjct: 181 DVERPESVKIDARDISGTRFMFNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTRKVAAGFGKS 393
           QALE+KYEDKTGLPSPERIENFRTRKVAAGFGKS
Sbjct: 241 QALEKKYEDKTGLPSPERIENFRTRKVAAGFGKS 274

[Close]

BLAST of Clc10G13340 vs. NCBI nr
Match: XP_022989167.1 (peptide deformylase 1B, chloroplastic [Cucurbita maxima])

HSP 1 Score: 482.3 bits (1240), Expect = 4.1e-132
Identity = 242/275 (88.00%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAYT RLHVSL H LLPT+ RR ALPAV RRLS   STG+  S+ SKFRPP+TLVYAQAK
Sbjct: 1   MAYTARLHVSLPHALLPTLSRRSALPAVLRRLSRFSSTGRLLSNSSKFRPPTTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKT++FNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTILFNEGCLSFPRIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DV+RPESVKIDARDI+G RFMVNLSGLPARVFQHEFDHLQG LFFDRMTDEVL+TIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTR-KVAAGFGKS 393
           QALE+KYED+TGLPSPERIEN RTR KVAAGFGKS
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS 275

[Close]

BLAST of Clc10G13340 vs. NCBI nr
Match: XP_022928203.1 (peptide deformylase 1B, chloroplastic [Cucurbita moschata])

HSP 1 Score: 478.8 bits (1231), Expect = 4.5e-131
Identity = 241/275 (87.64%), Postives = 254/275 (92.36%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAYT RLH+SL H LLPT+ RR ALPAV RRLS   STG+  S+ SKFRPP+TLVYAQAK
Sbjct: 1   MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTV+FNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DV+RPESVKIDARDI+G RFMVNLSGLPARVFQHEFDHLQG LFFDRMTDEVL+TIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTR-KVAAGFGKS 393
           QALE+KYED+TGLPSPERIEN RTR KVAAGFGKS
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS 275

[Close]

BLAST of Clc10G13340 vs. NCBI nr
Match: XP_022152139.1 (peptide deformylase 1B, chloroplastic [Momordica charantia])

HSP 1 Score: 478.4 bits (1230), Expect = 5.9e-131
Identity = 241/273 (88.28%), Postives = 253/273 (92.67%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAYT RLH+SL H LLP   RRLALPAVFRRLS   ST +FFSH SK RPPSTLVYAQAK
Sbjct: 1   MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFSAKEDD A S DLEFEAPLKIVEYPD ILRAKNKRIDSFDDNLKKLV+EMFDVMYKT
Sbjct: 61  RGFSAKEDDAALSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRV+RYSKKTV+FNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DVERPESVKIDARDI+G RFMVNLSGLPARVFQHEFDHLQG LFFDRMTDEVL+TIR QL
Sbjct: 181 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRT-RKVAAGFG 391
           QALE+KYE++TGLPSPERIENFRT +KVAAG+G
Sbjct: 241 QALEKKYEERTGLPSPERIENFRTKKKVAAGYG 273

[Close]

BLAST of Clc10G13340 vs. NCBI nr
Match: XP_011652283.1 (peptide deformylase 1B, chloroplastic [Cucumis sativus] >KGN59682.1 hypothetical protein Csa_000764 [Cucumis sativus])

HSP 1 Score: 476.9 bits (1226), Expect = 1.7e-130
Identity = 242/274 (88.32%), Postives = 252/274 (91.97%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAY TRLH+SL H LLPTV   L+ PAVFRRLSG  ST K FSH SKF+ PSTLVYAQAK
Sbjct: 1   MAYATRLHISLPHALLPTVSCWLSPPAVFRRLSGFSSTCKLFSHSSKFKAPSTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFSAKEDDVASS+DLEFEAPLKIVEYPD ILRAKNKRI SFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSAKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDDNLKKLVQEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFN VGERGEGEEIVLVNP+VYRYSKKTV+FNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPMIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DVERPES+KIDARDI+G RFMVNLSGL ARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL
Sbjct: 181 DVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTRKVAAGFGKS 393
           QALE+KYED+TGLPSPERIENFR RKV AGFGKS
Sbjct: 241 QALEKKYEDRTGLPSPERIENFR-RKVGAGFGKS 273

[Close]

BLAST of Clc10G13340 vs. ExPASy Swiss-Prot
Match: Q9FV54 (Peptide deformylase 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1B PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.5e-92
Identity = 172/267 (64.42%), Postives = 203/267 (76.03%), Query Frame = 0


Query: 128 SLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAKRGFSAKE-- 187
           S +  L P + R  +   +   L    S    F   S  +PP   VYAQA+R  S+K   
Sbjct: 13  SFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRVLSSKTKG 72

Query: 188 DDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSA 247
           D++A+  DL F  PLKIVEYPD ILRAKNKRID+FD NLKKLV EMFD+MYKTDGIGLSA
Sbjct: 73  DEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGIGLSA 132

Query: 248 PQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPES 307
           PQVG+NVQLMVFN  GERGEGEEIVLVNPRV RYS++ + + EGCLSFP I+ DV+RPES
Sbjct: 133 PQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVKRPES 192

Query: 308 VKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEQKY 367
           VK+DA+DING RF ++LS LPARVFQHEFDHLQG LFFD+MTDEVL+TIR +L ALE+KY
Sbjct: 193 VKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDTIREKLVALEKKY 252

Query: 368 EDKTGLPSPERIENFRTRKVAAGFGKS 393
           ED+TGLP+PE I   + +K A GFGKS
Sbjct: 253 EDRTGLPTPESINTRKIKKAAVGFGKS 279

[Close]

BLAST of Clc10G13340 vs. ExPASy Swiss-Prot
Match: Q9FUZ2 (Peptide deformylase 1B, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PDF1B PE=1 SV=2)

HSP 1 Score: 337.4 bits (864), Expect = 2.1e-91
Identity = 174/264 (65.91%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 129 LSHVLLPTVPRR-LALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAKRGFSAKEDD 188
           LS +LLP + RR   L A + RL    ST  F S +++  P ++ V A+ KR  S K+D 
Sbjct: 13  LSRILLPVLSRRATTLSAGYGRLK---STVTFCSTVNRTSPLTSSVRAEVKR-VSRKDDK 72

Query: 189 VASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQ 248
           VAS+ D++FE PLKIVEYPD ILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQ
Sbjct: 73  VASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQ 132

Query: 249 VGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPESVK 308
           VG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVK
Sbjct: 133 VGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVK 192

Query: 309 IDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEQKYED 368
           IDARDI G RF ++LS LPAR+FQHE+DHL+G LFFDRMTD+VL++IR +L+ALE+KYE+
Sbjct: 193 IDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEE 252

Query: 369 KTGLPSPERIENFRTRKVAAGFGK 392
           KTGLPSPER+E  + RK   GFGK
Sbjct: 253 KTGLPSPERVEARQKRKAGVGFGK 272

[Close]

BLAST of Clc10G13340 vs. ExPASy Swiss-Prot
Match: Q5VNN5 (Peptide deformylase 1B, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PDF1B PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 5.8e-81
Identity = 150/237 (63.29%), Postives = 187/237 (78.90%), Query Frame = 0


Query: 163 LSKFRPPSTLVYAQAKRGFS--------AKEDDVASSIDLEFEAPLKIVEYPDSILRAKN 222
           LS+    + L  A+A+RGF         A+++D A++ DL+FE PLK+V+YPD ILRA+N
Sbjct: 33  LSRMGSVAPLAAARARRGFGSAVATAPPAEDEDFATAADLQFEPPLKVVKYPDPILRARN 92

Query: 223 KRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP 282
           KRI++FDDNL+ L  EMFDVMYKTDGIGLSAPQVGVNVQLMVFNP G +GEGEEIVLVNP
Sbjct: 93  KRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNP 152

Query: 283 RVYRYSKKTVVFNEGCLSFPRIYADVERPESVKIDARDINGARFMVNLSGLPARVFQHEF 342
            VY+ SK+ +V+ EGCLSFP IYA+V RP++VKIDA+D+ GA+  V LSGL ARVFQHEF
Sbjct: 153 VVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQDVTGAKIKVKLSGLSARVFQHEF 212

Query: 343 DHLQGTLFFDRMTDEVLETIRPQLQALEQKYEDKTGLPSPERIENFRTRKVAAGFGK 392
           DHLQG LFFDRM+ +VLE++R  L+ LE+KYE+ TGL SPE IEN++ RK    F +
Sbjct: 213 DHLQGILFFDRMSLDVLESVREGLKDLEKKYEESTGLVSPESIENYKGRKDLISFSR 269

[Close]

BLAST of Clc10G13340 vs. ExPASy Swiss-Prot
Match: Q7UHZ5 (Peptide deformylase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=def PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 72/175 (41.14%), Postives = 102/175 (58.29%), Query Frame = 0


Query: 199 PLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFN 258
           PL I+ +P   LR  ++ I   D  LK +  EM D+MY+ DG+GL+A QV + +++ V N
Sbjct: 2   PLSIIHFPHPTLRHVSRPIVRVDAKLKSMADEMLDLMYEFDGVGLAANQVDLPIRMFVAN 61

Query: 259 PVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPESVKIDARDINGARF 318
           P G+R EGE  V++NP + R  K      EGCLS P +Y  V+RP++V++   D+ G   
Sbjct: 62  PTGKRDEGESWVILNPEIDR-PKGNDTAQEGCLSVPGLYGQVKRPKTVRLRGFDLQGNEI 121

Query: 319 MVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEQKYEDKTGLPS 374
              L G  ARV QHE DHL G +FFDR+ +E L  +   L+  +  YE K G  S
Sbjct: 122 NQVLDGFMARVVQHEVDHLDGIMFFDRIGEEGLRDLEGHLEEFKTDYESKQGTGS 175

[Close]

BLAST of Clc10G13340 vs. ExPASy Swiss-Prot
Match: Q7NIF5 (Peptide deformylase 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=def2 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-32
Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 199 PLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFN 258
           PL I    D +LR  +K+I   +D ++KL  +M   MY  DGIGL+APQVGVN +++V +
Sbjct: 16  PLAIHTLGDRVLRQGSKQISGINDEVRKLAQQMLQTMYSADGIGLAAPQVGVNKRMIVVD 75

Query: 259 PVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPESVKIDARDINGARF 318
              E      +VL+NP + ++S    V  EGCLS P IYADV RPE V    RD+NG   
Sbjct: 76  IDPENAARPPLVLINPLIKQFSSDLAVDQEGCLSVPSIYADVRRPERVVATYRDLNGRPV 135

Query: 319 MVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 359
            +  +GL AR  QHE DHL G LF DR+ +++   + PQL
Sbjct: 136 TLEATGLLARCIQHEIDHLDGVLFVDRVENQI--ALAPQL 173

[Close]

BLAST of Clc10G13340 vs. ExPASy TrEMBL
Match: A0A6J1JF23 (Peptide deformylase OS=Cucurbita maxima OX=3661 GN=LOC111486320 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 2.0e-132
Identity = 242/275 (88.00%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAYT RLHVSL H LLPT+ RR ALPAV RRLS   STG+  S+ SKFRPP+TLVYAQAK
Sbjct: 1   MAYTARLHVSLPHALLPTLSRRSALPAVLRRLSRFSSTGRLLSNSSKFRPPTTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKT++FNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTILFNEGCLSFPRIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DV+RPESVKIDARDI+G RFMVNLSGLPARVFQHEFDHLQG LFFDRMTDEVL+TIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTR-KVAAGFGKS 393
           QALE+KYED+TGLPSPERIEN RTR KVAAGFGKS
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS 275

[Close]

BLAST of Clc10G13340 vs. ExPASy TrEMBL
Match: A0A6J1EN89 (Peptide deformylase OS=Cucurbita moschata OX=3662 GN=LOC111435101 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 2.2e-131
Identity = 241/275 (87.64%), Postives = 254/275 (92.36%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAYT RLH+SL H LLPT+ RR ALPAV RRLS   STG+  S+ SKFRPP+TLVYAQAK
Sbjct: 1   MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFS KEDDVASS DLEFEAPL+IVEYPD ILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTV+FNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DV+RPESVKIDARDI+G RFMVNLSGLPARVFQHEFDHLQG LFFDRMTDEVL+TIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTR-KVAAGFGKS 393
           QALE+KYED+TGLPSPERIEN RTR KVAAGFGKS
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS 275

[Close]

BLAST of Clc10G13340 vs. ExPASy TrEMBL
Match: A0A6J1DF55 (Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111019929 PE=3 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.9e-131
Identity = 241/273 (88.28%), Postives = 253/273 (92.67%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAYT RLH+SL H LLP   RRLALPAVFRRLS   ST +FFSH SK RPPSTLVYAQAK
Sbjct: 1   MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFSAKEDD A S DLEFEAPLKIVEYPD ILRAKNKRIDSFDDNLKKLV+EMFDVMYKT
Sbjct: 61  RGFSAKEDDAALSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRV+RYSKKTV+FNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DVERPESVKIDARDI+G RFMVNLSGLPARVFQHEFDHLQG LFFDRMTDEVL+TIR QL
Sbjct: 181 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRT-RKVAAGFG 391
           QALE+KYE++TGLPSPERIENFRT +KVAAG+G
Sbjct: 241 QALEKKYEERTGLPSPERIENFRTKKKVAAGYG 273

[Close]

BLAST of Clc10G13340 vs. ExPASy TrEMBL
Match: A0A0A0LG66 (Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_3G837630 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 8.3e-131
Identity = 242/274 (88.32%), Postives = 252/274 (91.97%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAY TRLH+SL H LLPTV   L+ PAVFRRLSG  ST K FSH SKF+ PSTLVYAQAK
Sbjct: 1   MAYATRLHISLPHALLPTVSCWLSPPAVFRRLSGFSSTCKLFSHSSKFKAPSTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGFSAKEDDVASS+DLEFEAPLKIVEYPD ILRAKNKRI SFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSAKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDDNLKKLVQEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFN VGERGEGEEIVLVNP+VYRYSKKTV+FNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPMIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DVERPES+KIDARDI+G RFMVNLSGL ARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL
Sbjct: 181 DVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTRKVAAGFGKS 393
           QALE+KYED+TGLPSPERIENFR RKV AGFGKS
Sbjct: 241 QALEKKYEDRTGLPSPERIENFR-RKVGAGFGKS 273

[Close]

BLAST of Clc10G13340 vs. ExPASy TrEMBL
Match: A0A1S3B8C2 (Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103487104 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 2.7e-129
Identity = 241/274 (87.96%), Postives = 248/274 (90.51%), Query Frame = 0


Query: 119 MAYTTRLHVSLSHVLLPTVPRRLALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAK 178
           MAYTTRLH+SL   LLPTV   L+ P VFRRLSG  ST    SH SKFR PSTLVYAQAK
Sbjct: 1   MAYTTRLHISLPRALLPTVSCWLSPPVVFRRLSGFSSTCTLISHSSKFRAPSTLVYAQAK 60

Query: 179 RGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKT 238
           RGF AKEDDVASS+DLEFEAPLKIVEYPD ILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFYAKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 239 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYA 298
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTV FNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVPFNEGCLSFPMIYA 180

Query: 299 DVERPESVKIDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 358
           DVERPES+KIDARDI G RFMVNLSGL ARVFQHEFDHLQG LFFDRMTDEVLETIRPQL
Sbjct: 181 DVERPESIKIDARDIRGTRFMVNLSGLSARVFQHEFDHLQGILFFDRMTDEVLETIRPQL 240

Query: 359 QALEQKYEDKTGLPSPERIENFRTRKVAAGFGKS 393
           QALE+KYED+TGLPSPERIENFR RKVAAGFGKS
Sbjct: 241 QALEKKYEDRTGLPSPERIENFR-RKVAAGFGKS 273

[Close]

BLAST of Clc10G13340 vs. TAIR 10
Match: AT5G14660.1 (peptide deformylase 1B )

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-92
Identity = 174/264 (65.91%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 129 LSHVLLPTVPRR-LALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAKRGFSAKEDD 188
           LS +LLP + RR   L A + RL    ST  F S +++  P ++ V A+ KR  S K+D 
Sbjct: 13  LSRILLPVLSRRATTLSAGYGRLK---STVTFCSTVNRTSPLTSSVRAEVKR-VSRKDDK 72

Query: 189 VASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQ 248
           VAS+ D++FE PLKIVEYPD ILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQ
Sbjct: 73  VASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQ 132

Query: 249 VGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPESVK 308
           VG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVK
Sbjct: 133 VGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVK 192

Query: 309 IDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEQKYED 368
           IDARDI G RF ++LS LPAR+FQHE+DHL+G LFFDRMTD+VL++IR +L+ALE+KYE+
Sbjct: 193 IDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEE 252

Query: 369 KTGLPSPERIENFRTRKVAAGFGK 392
           KTGLPSPER+E  + RK   GFGK
Sbjct: 253 KTGLPSPERVEARQKRKAGVGFGK 272

[Close]

BLAST of Clc10G13340 vs. TAIR 10
Match: AT5G14660.2 (peptide deformylase 1B )

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-92
Identity = 174/264 (65.91%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 129 LSHVLLPTVPRR-LALPAVFRRLSGLPSTGKFFSHLSKFRPPSTLVYAQAKRGFSAKEDD 188
           LS +LLP + RR   L A + RL    ST  F S +++  P ++ V A+ KR  S K+D 
Sbjct: 13  LSRILLPVLSRRATTLSAGYGRLK---STVTFCSTVNRTSPLTSSVRAEVKR-VSRKDDK 72

Query: 189 VASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFDDNLKKLVYEMFDVMYKTDGIGLSAPQ 248
           VAS+ D++FE PLKIVEYPD ILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQ
Sbjct: 73  VASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQ 132

Query: 249 VGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPESVK 308
           VG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVK
Sbjct: 133 VGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVK 192

Query: 309 IDARDINGARFMVNLSGLPARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEQKYED 368
           IDARDI G RF ++LS LPAR+FQHE+DHL+G LFFDRMTD+VL++IR +L+ALE+KYE+
Sbjct: 193 IDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEE 252

Query: 369 KTGLPSPERIENFRTRKVAAGFGK 392
           KTGLPSPER+E  + RK   GFGK
Sbjct: 253 KTGLPSPERVEARQKRKAGVGFGK 272

[Close]

BLAST of Clc10G13340 vs. TAIR 10
Match: AT1G15390.1 (peptide deformylase 1A )

HSP 1 Score: 100.1 bits (248), Expect = 4.1e-21
Identity = 64/204 (31.37%), Postives = 96/204 (47.06%), Query Frame = 0


Query: 168 PPSTLVYAQAKRGFSAKEDDVASSIDLEFEAPLKIVEYPDSILRAKNKRIDSFD---DNL 227
           P S+      K G+     +    +DL      +IV   D +L  K + +D  +   + +
Sbjct: 54  PTSSSSSLSTKAGWLLGLGEKKKKVDLP-----EIVASGDPVLHEKAREVDPGEIGSERI 113

Query: 228 KKLVYEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP--------------VGERGEGEEIV 287
           +K++ +M  VM    G+GL+APQ+GV ++++V                   ER   + +V
Sbjct: 114 QKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMV 173

Query: 288 LVNPRVYRYSKKTVVFNEGCLSFPRIYADVERPESVKIDARDINGARFMVNLSGLPARVF 347
           +VNP +   S K  +F EGCLS     A VER   V +   D  G R  VN SG  AR+ 
Sbjct: 174 MVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARIL 233

Query: 348 QHEFDHLQGTLFFDRMTDEVLETI 355
           QHE DHL G L+ D+M      T+
Sbjct: 234 QHECDHLDGNLYVDKMVPRTFRTV 252

[Close]

BLAST of Clc10G13340 vs. TAIR 10
Match: AT2G26990.1 (proteasome family protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-14
Identity = 45/67 (67.16%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 1   MMDSYRVMLVYNLHGLCSTYIASAVARNYSEPCI-NFMDFVSGSASQSFGLLQEFYQTTL 60
           MM++Y  ML         TYI SAV RNYSE CI N MDFVSGSASQ+ GLLQEFYQTTL
Sbjct: 82  MMEAYTEML---------TYIKSAVTRNYSEKCINNIMDFVSGSASQNTGLLQEFYQTTL 139

Query: 61  KALEEQR 67
           KALEE +
Sbjct: 142 KALEEAK 139

The following BLAST results are available for this feature:

BLAST of Clc10G13340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904020.1	9.1e-140	91.97	peptide deformylase 1B, chloroplastic [Benincasa hispida]	[more]
XP_022989167.1	4.1e-132	88.00	peptide deformylase 1B, chloroplastic [Cucurbita maxima]	[more]
XP_022928203.1	4.5e-131	87.64	peptide deformylase 1B, chloroplastic [Cucurbita moschata]	[more]
XP_022152139.1	5.9e-131	88.28	peptide deformylase 1B, chloroplastic [Momordica charantia]	[more]
XP_011652283.1	1.7e-130	88.32	peptide deformylase 1B, chloroplastic [Cucumis sativus] >KGN59682.1 hypothetical...	[more]

BLAST of Clc10G13340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FV54	2.5e-92	64.42	Peptide deformylase 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1B P...	[more]
Q9FUZ2	2.1e-91	65.91	Peptide deformylase 1B, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3...	[more]
Q5VNN5	5.8e-81	63.29	Peptide deformylase 1B, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q7UHZ5	1.7e-32	41.14	Peptide deformylase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / ...	[more]
Q7NIF5	2.9e-32	44.38	Peptide deformylase 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX...	[more]

BLAST of Clc10G13340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JF23	2.0e-132	88.00	Peptide deformylase OS=Cucurbita maxima OX=3661 GN=LOC111486320 PE=3 SV=1	[more]
A0A6J1EN89	2.2e-131	87.64	Peptide deformylase OS=Cucurbita moschata OX=3662 GN=LOC111435101 PE=3 SV=1	[more]
A0A6J1DF55	2.9e-131	88.28	Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111019929 PE=3 SV=1	[more]
A0A0A0LG66	8.3e-131	88.32	Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_3G837630 PE=3 SV=1	[more]
A0A1S3B8C2	2.7e-129	87.96	Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103487104 PE=3 SV=1	[more]

BLAST of Clc10G13340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14660.1	1.5e-92	65.91	peptide deformylase 1B	[more]
AT5G14660.2	1.5e-92	65.91	peptide deformylase 1B	[more]
AT1G15390.1	4.1e-21	31.37	peptide deformylase 1A	[more]
AT2G26990.1	3.7e-14	67.16	proteasome family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023635	Peptide deformylase	PRINTS	PR01576	PDEFORMYLASE	coord: 288..299 score: 57.1 coord: 319..348 score: 46.79 coord: 300..318 score: 34.99 coord: 229..258 score: 40.62
IPR023635	Peptide deformylase	TIGRFAM	TIGR00079	TIGR00079	coord: 200..350 e-value: 8.4E-46 score: 153.4
IPR023635	Peptide deformylase	PFAM	PF01327	Pep_deformylase	coord: 200..349 e-value: 6.0E-48 score: 162.4
IPR023635	Peptide deformylase	PANTHER	PTHR10458	PEPTIDE DEFORMYLASE	coord: 165..365
IPR023635	Peptide deformylase	HAMAP	MF_00163	Pep_deformylase	coord: 198..361 score: 27.198797
IPR023635	Peptide deformylase	CDD	cd00487	Pep_deformylase	coord: 202..342 e-value: 7.8716E-62 score: 193.857
IPR036821	Peptide deformylase superfamily	GENE3D	3.90.45.10	Peptide deformylase	coord: 184..376 e-value: 5.5E-65 score: 219.8
IPR036821	Peptide deformylase superfamily	SUPERFAMILY	56420	Peptide deformylase	coord: 197..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..89
None	No IPR available	PANTHER	PTHR10458:SF2	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	coord: 165..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G13340.2	Clc10G13340.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018206	peptidyl-methionine modification
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0042586	peptide deformylase activity