Clc10G12590 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G12590
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Adenylyl-sulfate kinase
Location	ClcChr10: 26188618 .. 26188893 (+)
RNA-Seq Expression	Clc10G12590
Synteny	Clc10G12590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGAACAGTCCTCTTGTTCTTTGGGTCGCCAATATTTCTGCCGATCTCTGTCAATACGTTGCCTGTAATCCCGAGCGCTTCAGCAGCGACCATGTTCTTTACCTCATCTTCTGTTTTCCTTTCCGCCATTTCCGCCTTATCTCACTTTCCCTTCTCTCCTCCCTCTGCCCTCCCTCTCTCCTCTCCTCTTCTTCCTCTTCCTCCGGTTCCGATTCCGAATCCGAATCCGACGACCTCGATTCCTACGGTTACAATTCCCACTCCGATTGA

mRNA sequence

ATGGTGTTGAACAGTCCTCTTGTTCTTTGGGTCGCCAATATTTCTGCCGATCTCTGTCAATACGTTGCCTGTAATCCCGAGCGCTTCAGCAGCGACCATGTTCTTTACCTCATCTTCTGTTTTCCTTTCCGCCATTTCCGCCTTATCTCACTTTCCCTTCTCTCCTCCCTCTGCCCTCCCTCTCTCCTCTCCTCTTCTTCCTCTTCCTCCGGTTCCGATTCCGAATCCGAATCCGACGACCTCGATTCCTACGGTTACAATTCCCACTCCGATTGA

Coding sequence (CDS)

ATGGTGTTGAACAGTCCTCTTGTTCTTTGGGTCGCCAATATTTCTGCCGATCTCTGTCAATACGTTGCCTGTAATCCCGAGCGCTTCAGCAGCGACCATGTTCTTTACCTCATCTTCTGTTTTCCTTTCCGCCATTTCCGCCTTATCTCACTTTCCCTTCTCTCCTCCCTCTGCCCTCCCTCTCTCCTCTCCTCTTCTTCCTCTTCCTCCGGTTCCGATTCCGAATCCGAATCCGACGACCTCGATTCCTACGGTTACAATTCCCACTCCGATTGA

Protein sequence

MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPPSLLSSSSSSSGSDSESESDDLDSYGYNSHSD

Homology

[Close]

BLAST of Clc10G12590 vs. NCBI nr
Match: KAG6581681.1 (hypothetical protein SDJN03_21683, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018171.1 hypothetical protein SDJN02_20039, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.0 bits (349), Expect = 2.0e-29
Identity = 75/91 (82.42%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPP 60
          MVLNSP+V+WVANISADLCQYVACNPER SSDHVLYLIFCFPF H R ISLSLLSSLC P
Sbjct: 1  MVLNSPVVVWVANISADLCQYVACNPERLSSDHVLYLIFCFPFHHIRRISLSLLSSLCLP 60

Query: 61 SLLSSSSSSSGSDSESESDDLDSYGYNSHSD 92
          SL SSSSSSS     S +DDLDSY YNSHSD
Sbjct: 61 SLSSSSSSSSSDSDYSNTDDLDSYDYNSHSD 91

[Close]

BLAST of Clc10G12590 vs. NCBI nr
Match: XP_022974223.1 (uncharacterized protein LOC111472845 [Cucurbita maxima])

HSP 1 Score: 137.1 bits (344), Expect = 7.5e-29
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPP 60
          MVLNSP+V+WVAN+SADLCQYVACNPER SSDHVLYLIFCFPF H R ISLSLLSSLC P
Sbjct: 1  MVLNSPVVVWVANLSADLCQYVACNPERLSSDHVLYLIFCFPFHHIRRISLSLLSSLCLP 60

Query: 61 SLLSSSSSSSGSDSESESDDLDSYGYNSHSD 92
          SL SSSSSSS     S +DDLDSY YNSHSD
Sbjct: 61 SLSSSSSSSSSDSDYSITDDLDSYDYNSHSD 91

[Close]

BLAST of Clc10G12590 vs. NCBI nr
Match: KAF5823314.1 (hypothetical protein HanXRQr2_Chr01g0037021 [Helianthus annuus])

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-14
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPP 60
          MV+NSPLV+ VANISADLCQY+ACNPER SS+ VL+L+FCFPF+ FR ++L L +  C P
Sbjct: 1  MVMNSPLVVTVANISADLCQYIACNPERLSSEQVLHLLFCFPFQQFRRLALCLWTFFCFP 60

Query: 61 S----LLSSSSSSSGSDSESESD 80
          +      SSSSSS  SD +S SD
Sbjct: 61 TNHFYSSSSSSSSFSSDEDSHSD 83

[Close]

BLAST of Clc10G12590 vs. NCBI nr
Match: OWM78816.1 (hypothetical protein CDL15_Pgr002987 [Punica granatum] >PKI34071.1 hypothetical protein CRG98_045528 [Punica granatum])

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-14
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPP 60
          MVL++ +V  VA++SA+LCQY+ACNPERFSSD VL L+FCFPF+H R  +LSL + LC  
Sbjct: 1  MVLSAAVVAAVADVSANLCQYIACNPERFSSDQVLRLLFCFPFQHVRHFALSLTACLC-- 60

Query: 61 SLLSSSSSSSGSDSESESDDLDSYGYNSHSD 92
           +LSS +SSS SDS+S   DL +Y  +SHSD
Sbjct: 61 FVLSSDTSSSSSDSDS---DLSAYSNDSHSD 86

[Close]

BLAST of Clc10G12590 vs. NCBI nr
Match: KAE9456001.1 (hypothetical protein C3L33_12111, partial [Rhododendron williamsianum])

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-14
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLC-- 60
          MV NSPLV+ VANISA++CQY+ACNPER SSDHVL L+FCFPF+ FR + L L +  C  
Sbjct: 1  MVFNSPLVVEVANISANVCQYIACNPERLSSDHVLRLLFCFPFQQFRRLLLRLSAXFCFP 60

Query: 61 --PPSLLSSSSSSSGSDSESESD 80
             P L SSSSSSS   S+S++D
Sbjct: 61 PPDPHLSSSSSSSSSDPSDSDND 83

[Close]

BLAST of Clc10G12590 vs. ExPASy TrEMBL
Match: A0A0A0LCL0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843740 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.8e-32
Identity = 79/92 (85.87%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPP 60
          MVLNSPLVLWVANISADLCQY+ACNPERFSS HVLYLIFCFPFRHFR ISLS+ SSLC P
Sbjct: 1  MVLNSPLVLWVANISADLCQYIACNPERFSSHHVLYLIFCFPFRHFRRISLSIFSSLCLP 60

Query: 61 SLLSSSSSSSG-SDSESESDDLDSYGYNSHSD 92
          SLLSSSSSSS  S+S+S++DDLDSY YNSHSD
Sbjct: 61 SLLSSSSSSSSDSNSDSDTDDLDSYDYNSHSD 92

[Close]

BLAST of Clc10G12590 vs. ExPASy TrEMBL
Match: A0A6J1IFL3 (uncharacterized protein LOC111472845 OS=Cucurbita maxima OX=3661 GN=LOC111472845 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.6e-29
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPP 60
          MVLNSP+V+WVAN+SADLCQYVACNPER SSDHVLYLIFCFPF H R ISLSLLSSLC P
Sbjct: 1  MVLNSPVVVWVANLSADLCQYVACNPERLSSDHVLYLIFCFPFHHIRRISLSLLSSLCLP 60

Query: 61 SLLSSSSSSSGSDSESESDDLDSYGYNSHSD 92
          SL SSSSSSS     S +DDLDSY YNSHSD
Sbjct: 61 SLSSSSSSSSSDSDYSITDDLDSYDYNSHSD 91

[Close]

BLAST of Clc10G12590 vs. ExPASy TrEMBL
Match: A0A218X288 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002987 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.1e-15
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLCPP 60
          MVL++ +V  VA++SA+LCQY+ACNPERFSSD VL L+FCFPF+H R  +LSL + LC  
Sbjct: 1  MVLSAAVVAAVADVSANLCQYIACNPERFSSDQVLRLLFCFPFQHVRHFALSLTACLC-- 60

Query: 61 SLLSSSSSSSGSDSESESDDLDSYGYNSHSD 92
           +LSS +SSS SDS+S   DL +Y  +SHSD
Sbjct: 61 FVLSSDTSSSSSDSDS---DLSAYSNDSHSD 86

[Close]

BLAST of Clc10G12590 vs. ExPASy TrEMBL
Match: A0A6A4LIF7 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_12111 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.1e-15
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLC-- 60
          MV NSPLV+ VANISA++CQY+ACNPER SSDHVL L+FCFPF+ FR + L L +  C  
Sbjct: 1  MVFNSPLVVEVANISANVCQYIACNPERLSSDHVLRLLFCFPFQQFRRLLLRLSAXFCFP 60

Query: 61 --PPSLLSSSSSSSGSDSESESD 80
             P L SSSSSSS   S+S++D
Sbjct: 61 PPDPHLSSSSSSSSSDPSDSDND 83

[Close]

BLAST of Clc10G12590 vs. ExPASy TrEMBL
Match: A0A2R6R511 (Vacuolar fusion protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10138 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.7e-15
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 1  MVLNSPLVLWVANISADLCQYVACNPERFSSDHVLYLIFCFPFRHFRLISLSLLSSLC-- 60
          MVLNS LV+ VAN+SA++CQY+ACNPER SSD VL+L+FC PF+ FR ++L L S  C  
Sbjct: 1  MVLNSSLVVEVANLSANVCQYIACNPERLSSDQVLHLLFCLPFQQFRRLALCLWSFFCFP 60

Query: 61 PPSLLSSSSSSSGSDSESESD 80
          PP    SSSSSS SDS+S SD
Sbjct: 61 PPHPYLSSSSSSDSDSDSRSD 81

The following BLAST results are available for this feature:

BLAST of Clc10G12590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581681.1	2.0e-29	82.42	hypothetical protein SDJN03_21683, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022974223.1	7.5e-29	81.32	uncharacterized protein LOC111472845 [Cucurbita maxima]	[more]
KAF5823314.1	1.0e-14	61.45	hypothetical protein HanXRQr2_Chr01g0037021 [Helianthus annuus]	[more]
OWM78816.1	1.0e-14	59.34	hypothetical protein CDL15_Pgr002987 [Punica granatum] >PKI34071.1 hypothetical ...	[more]
KAE9456001.1	1.0e-14	61.45	hypothetical protein C3L33_12111, partial [Rhododendron williamsianum]	[more]

BLAST of Clc10G12590 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G12590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCL0	7.8e-32	85.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843740 PE=4 SV=1	[more]
A0A6J1IFL3	3.6e-29	81.32	uncharacterized protein LOC111472845 OS=Cucurbita maxima OX=3661 GN=LOC111472845...	[more]
A0A218X288	5.1e-15	59.34	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr002987 PE=4 SV=1	[more]
A0A6A4LIF7	5.1e-15	61.45	Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3...	[more]
A0A2R6R511	8.7e-15	62.96	Vacuolar fusion protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]

BLAST of Clc10G12590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..91
None	No IPR available	PANTHER	PTHR35104	OS03G0807000 PROTEIN	coord: 1..88
None	No IPR available	PANTHER	PTHR35104:SF13	BNAA05G37210D PROTEIN	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G12590.1	Clc10G12590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
molecular_function	GO:0016740	transferase activity