Clc10G11420 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCGATGCTAACAGTGCCTTTCTTGTTAGGGGAGATGGTGACTTCCTCTGAAGAAGGCGAAATTCATCCTTATGGTATGTCCGCTTTACCATGTTAAAGGATGCGATGTCAACGGTTCCACAAGTTTGCACACATGCATTGACTTGGCGACTATGCAAGGTGTGTGGTGGAATTTATGTCGATGACTTAAGGACTTCAAGGTGAGCCAAACAGGTGGAAGTTGCACCATAAATTTCAATAGGGTTTATCAACATGTGACGAAAAAGGAAAATATTGGAAGGTGGTATTCCAAGTGGTCTATTTATGGTGAAGCAAGTTACAATTCTAAGATATGAGAATTATGATTGTCGGGGAAGATAATGGATGTAGTATAAGCTATGGATTATTCAAATATCTTGCCAAGGTGGAATTTGTTGATTTTTGGCAAATTATTAGAAGTGTAGTTTGTCCTACATTTGAAAAATTGAAGAAAGTGATGGGCTCCTCCTACTATAAAGAGTCTATATTTTTAGTTCCAAATCGTCCTAGTTAGAAACACTTTAGGCTAACTCTAATTAAATTCCTTTTTGAGAGTGGAAAAATGTCTGAGTAGTCAAAAGTTTGACAGGGTGCTCTTGTAATTGGGATTAGAGAGAAATATTCAGTATGATTTTAACAATTTTTTACATAGTGAATTTCTTTTTGGTGGGTCATGGTTTTTCTTCGAGTTTGGAGTTTTCTACATAAATTCTTGTGTTTCCAGTTTTATTGTATTTTTTTTTTAAAAAAATTCTCTATTATTTTTTTGCTTATTCCTATTGTAGAAGTGAAGTTTTTCCCAACATTACTGACTATTAGTGATAGAAGTATATGACGTTTGTATCACTAATAATCAGTGATATAAGACTATCTCTTATTATCATTGATAGAAATATATCACTTTCTATCCATGATTATCACTTAAACTAATATGGGTTGGCTTAGTGGTAAAAAGAAAATATAGTCTCATCAAATAACTAAGAGGTCAAAGGGTTCAATGAATGATGGCTGCCTACGTAGGAATTAATTTTCTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAAACAGGTTGTTCCATGAGATTAGTCGAGGTGCGCATAGGCTGGGCTCAGAAGCATATCCCTTTTTATAATTAATAGACAGAATAGAATAAATAGATTTAAAGAAGTGGAGAAGAAATAGAATTTTAATTTGAAGCATATTGTAATTTTGAAGAACCTACAATCTGGTCGACTACCCAGCTCCATGTTATTTCGGACAAGCTTATGATTCTAAAGTCGGCTACTTTGGCGATGTTCATTTCTATGAGTTCCCCCAATTGATCGAACATGAACCCATTGACCATGGCTATGGAATTAGCTACTCGGCCAATGCTTCTTATGCATCGAGTTTCACTGTGCCAAAAGTAATCGAATACGACCCTCATTTTTACAGCGATGGTTTCCGTAATTGGAGGAGATGGAGAGAGTTGTAA ATGGATCCGATGCTAACAGTGCCTTTCTTGTTAGGGGAGATGGTGACTTCCTCTGAAGAAGGCGAAATTCATCCTTATGCTCCATGTTATTTCGGACAAGCTTATGATTCTAAAGTCGGCTACTTTGGCGATGTTCATTTCTATGAGTTCCCCCAATTGATCGAACATGAACCCATTGACCATGGCTATGGAATTAGCTACTCGGCCAATGCTTCTTATGCATCGAGTTTCACTGTGCCAAAAGTAATCGAATACGACCCTCATTTTTACAGCGATGGTTTCCGTAATTGGAGGAGATGGAGAGAGTTGTAA ATGGATCCGATGCTAACAGTGCCTTTCTTGTTAGGGGAGATGGTGACTTCCTCTGAAGAAGGCGAAATTCATCCTTATGCTCCATGTTATTTCGGACAAGCTTATGATTCTAAAGTCGGCTACTTTGGCGATGTTCATTTCTATGAGTTCCCCCAATTGATCGAACATGAACCCATTGACCATGGCTATGGAATTAGCTACTCGGCCAATGCTTCTTATGCATCGAGTTTCACTGTGCCAAAAGTAATCGAATACGACCCTCATTTTTACAGCGATGGTTTCCGTAATTGGAGGAGATGGAGAGAGTTGTAA MDPMLTVPFLLGEMVTSSEEGEIHPYAPCYFGQAYDSKVGYFGDVHFYEFPQLIEHEPIDHGYGISYSANASYASSFTVPKVIEYDPHFYSDGFRNWRRWREL Homology
BLAST of Clc10G11420 vs. NCBI nr
Match: XP_008441695.1 (PREDICTED: uncharacterized protein LOC103485767 [Cucumis melo]) HSP 1 Score: 95.9 bits (237), Expect = 2.2e-16 Identity = 48/73 (65.75%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Clc10G11420 vs. NCBI nr
Match: KAA0056916.1 (uncharacterized protein E6C27_scaffold96G00880 [Cucumis melo var. makuwa] >TYK26343.1 uncharacterized protein E5676_scaffold861G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 2.2e-16 Identity = 48/73 (65.75%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Clc10G11420 vs. NCBI nr
Match: XP_038895690.1 (uncharacterized protein LOC120083862 [Benincasa hispida]) HSP 1 Score: 94.0 bits (232), Expect = 8.2e-16 Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of Clc10G11420 vs. NCBI nr
Match: KAG7019657.1 (hypothetical protein SDJN02_18620 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 90.5 bits (223), Expect = 9.1e-15 Identity = 45/71 (63.38%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Clc10G11420 vs. NCBI nr
Match: KAG6584049.1 (hypothetical protein SDJN03_19981, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 89.0 bits (219), Expect = 2.6e-14 Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 0
BLAST of Clc10G11420 vs. ExPASy TrEMBL
Match: A0A5D3DRV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00010 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16 Identity = 48/73 (65.75%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Clc10G11420 vs. ExPASy TrEMBL
Match: A0A1S3B404 (uncharacterized protein LOC103485767 OS=Cucumis melo OX=3656 GN=LOC103485767 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16 Identity = 48/73 (65.75%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Clc10G11420 vs. ExPASy TrEMBL
Match: A0A0A0LUY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G070580 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.9e-14 Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of Clc10G11420 vs. ExPASy TrEMBL
Match: A0A6J1EHF5 (uncharacterized protein LOC111434325 OS=Cucurbita moschata OX=3662 GN=LOC111434325 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.9e-14 Identity = 45/71 (63.38%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of Clc10G11420 vs. ExPASy TrEMBL
Match: A0A6J1KI70 (uncharacterized protein LOC111495462 OS=Cucurbita maxima OX=3661 GN=LOC111495462 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13 Identity = 44/69 (63.77%), Postives = 49/69 (71.01%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|