Clc10G10980 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G10980
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	ClcChr10: 24296321 .. 24297118 (-)
RNA-Seq Expression	Clc10G10980
Synteny	Clc10G10980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGCTGTTCCTTTGAATGCACCGACCGAGCTCTCATCCTTGGTTCGCAGCAATGGTAGAGTCTCAATGAGAAGATCTGGAAAGCCAGCGGCTTCCTCAGGCAGCCCATGGTATGGTCCGGACCGTGTCAAGTACCTTGGACCATTCTCTGGTGAGCCTCCATCTTACCTCACAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGTCTATCTGCCGATCCTGAGACCTTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATACATGCACAGAGTATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCCGGAGGACCACTCGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGATCCCCTCGGACTGGCTGATGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTTGTACAAGCCATTGTAACAGGAAAGGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA

mRNA sequence

ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGCTGTTCCTTTGAATGCACCGACCGAGCTCTCATCCTTGGTTCGCAGCAATGGTAGAGTCTCAATGAGAAGATCTGGAAAGCCAGCGGCTTCCTCAGGCAGCCCATGGTATGGTCCGGACCGTGTCAAGTACCTTGGACCATTCTCTGGTGAGCCTCCATCTTACCTCACAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGTCTATCTGCCGATCCTGAGACCTTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATACATGCACAGAGTATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCCGGAGGACCACTCGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGATCCCCTCGGACTGGCTGATGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTTGTACAAGCCATTGTAACAGGAAAGGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA

Coding sequence (CDS)

ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGCTGTTCCTTTGAATGCACCGACCGAGCTCTCATCCTTGGTTCGCAGCAATGGTAGAGTCTCAATGAGAAGATCTGGAAAGCCAGCGGCTTCCTCAGGCAGCCCATGGTATGGTCCGGACCGTGTCAAGTACCTTGGACCATTCTCTGGTGAGCCTCCATCTTACCTCACAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGTCTATCTGCCGATCCTGAGACCTTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATACATGCACAGAGTATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCCGGAGGACCACTCGGAGAAATTACCGATCCCATCTACCCAGGCGGTAGCTTTGATCCCCTCGGACTGGCTGATGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTTGTACAAGCCATTGTAACAGGAAAGGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA

Protein sequence

MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of Clc10G10980 vs. NCBI nr
Match: XP_038903667.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 540.4 bits (1391), Expect = 8.6e-150
Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKAVPLNAPTELSS VRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. NCBI nr
Match: XP_008447450.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0038103.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20505.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 533.5 bits (1373), Expect = 1.0e-147
Identity = 259/265 (97.74%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGK VPLNAPTELSS VRSNGR+SMR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. NCBI nr
Match: XP_022998479.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima])

HSP 1 Score: 533.5 bits (1373), Expect = 1.0e-147
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKAVPLNAPTEL S VRSNGRVSMR+SGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. NCBI nr
Match: XP_022948926.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_023524829.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo] >KAG6606914.1 Chlorophyll a-b binding protein 3C, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 532.7 bits (1371), Expect = 1.8e-147
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKAVPLNAPTEL S VRSNGRVSMR+SGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. NCBI nr
Match: XP_022983188.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 530.4 bits (1365), Expect = 8.8e-147
Identity = 257/265 (96.98%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGKA+PLNAPTELSS VRSN RVSMRRSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-133
Identity = 230/259 (88.80%), Postives = 240/259 (92.66%), Query Frame = 0


Query: 9   TFTGKAVPL--NAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGPFSGEPP 68
           T  G+AV L  NAP      ++ N + +MR++   + SSGSPWYGPDRVKYLGPFSGEPP
Sbjct: 2   TLAGQAVKLSPNAPE-----IQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPP 61

Query: 69  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 128
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG
Sbjct: 62  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 121

Query: 129 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITD 188
           EAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGE+TD
Sbjct: 122 EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 181

Query: 189 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248
           PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL
Sbjct: 182 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 241

Query: 249 ADPVNNNAWAYATNFVPGK 266
           ADPVNNNAWAYATNFVPGK
Sbjct: 242 ADPVNNNAWAYATNFVPGK 255

[Close]

BLAST of Clc10G10980 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 9.9e-133
Identity = 234/267 (87.64%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 2   AAMAL-SSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPA--ASSGSPWYGPDRVKYL 61
           + MAL SSTF GKAV L+     SS +  NGRV+MR++   A  ASSGSPWYGPDRVKYL
Sbjct: 4   STMALSSSTFAGKAVKLSPS---SSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 63

Query: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 123

Query: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 181
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Clc10G10980 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-132
Identity = 234/265 (88.30%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 2   AAMALSS-TFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 61
           ++MALSS +  GKAV      +L       GRVSMR++     SSGSPWYGPDRVKYLGP
Sbjct: 5   SSMALSSPSLAGKAV------KLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGP 64

Query: 62  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 121
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 65  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 124

Query: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 181
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGP
Sbjct: 125 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 184

Query: 182 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 241
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 185 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 244

Query: 242 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLA PVNNNAWAYATNFVPGK
Sbjct: 245 NLADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Clc10G10980 vs. ExPASy Swiss-Prot
Match: P27492 (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB16 PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 6.4e-132
Identity = 229/263 (87.07%), Postives = 242/263 (92.02%), Query Frame = 0


Query: 5   ALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPA--ASSGSPWYGPDRVKYLGPFS 64
           ALSS F GKAV L+     SS V  NG+V+MR++   A   SSGSPWYGPDRVKYLGPFS
Sbjct: 7   ALSSPFAGKAVKLSPS---SSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFS 66

Query: 65  GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 124
           GE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG
Sbjct: 67  GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 126

Query: 125 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLG 184
           VKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLG
Sbjct: 127 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 186

Query: 185 EITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 244
           E+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 187 EVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 246

Query: 245 ADHLADPVNNNAWAYATNFVPGK 266
           ADHLADPVNNNAW+YATNFVPGK
Sbjct: 247 ADHLADPVNNNAWSYATNFVPGK 266

[Close]

BLAST of Clc10G10980 vs. ExPASy Swiss-Prot
Match: P27497 (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.1e-131
Identity = 232/268 (86.57%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 2   AAMALSST-FTGKAVPLNAPTELSSLVRSNGRVSMRRS---GKPAASSGSPWYGPDRVKY 61
           + MALSST F GKAV  N P+ L        RV+MR++    KPAASSGSPWYGPDRV Y
Sbjct: 4   STMALSSTAFAGKAV--NVPSSLF----GEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 63

Query: 62  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 121
           LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 64  LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 123

Query: 122 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIA 181
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGA+EGYR+A
Sbjct: 124 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVA 183

Query: 182 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
           GGPLGE+ DP+YPGG+FDPLGLADDPEAFA++KVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 GGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PLENLADHLADPVNNNAWAYATNFVPGK 266
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 244 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. ExPASy TrEMBL
Match: A0A5D3DAB9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00790 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.1e-148
Identity = 259/265 (97.74%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGK VPLNAPTELSS VRSNGR+SMR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. ExPASy TrEMBL
Match: A0A6J1KEF6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493100 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.1e-148
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKAVPLNAPTEL S VRSNGRVSMR+SGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. ExPASy TrEMBL
Match: A0A1S3BHH5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489893 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.1e-148
Identity = 259/265 (97.74%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGK VPLNAPTELSS VRSNGR+SMR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. ExPASy TrEMBL
Match: A0A6J1GAK0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452433 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 8.6e-148
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKAVPLNAPTEL S VRSNGRVSMR+SGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. ExPASy TrEMBL
Match: A0A6J1J722 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481846 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.3e-147
Identity = 257/265 (96.98%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAAMALSSTFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGKA+PLNAPTELSS VRSN RVSMRRSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 460.7 bits (1184), Expect = 8.0e-130
Identity = 226/266 (84.96%), Postives = 242/266 (90.98%), Query Frame = 0


Query: 2   AAMALSS-TFTGKAVPLNAPTELSSLVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 61
           + MALSS   TGKAV L   +  +S V   GR++MR++ KP   SGSPWYG DRVKYLGP
Sbjct: 4   STMALSSPALTGKAVKL---SPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 63

Query: 62  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 121
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 64  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 123

Query: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 181
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 124 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 183

Query: 182 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 241
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 184 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 243

Query: 242 ENLADHLADPVNNNAWAYATNFVPGK 266
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Clc10G10980 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 454.5 bits (1168), Expect = 5.7e-128
Identity = 227/267 (85.02%), Postives = 240/267 (89.89%), Query Frame = 0


Query: 2   AAMALSS-TFTGKAVPLNAPTELSSLVRSNGRVSMRRS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GKAV   A   L S     GRV+MR++  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVKPAASDVLGS-----GRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Clc10G10980 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 225/267 (84.27%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 2   AAMALSS-TFTGKAVPLNAPTELSSLVRSNGRVSMRRS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GKAV L   +  +S V  +GRV+MR++  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVKL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Clc10G10980 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-127
Identity = 225/267 (84.27%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 2   AAMALSS-TFTGKAVPLNAPTELSSLVRSNGRVSMRRS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GKAV L   +  +S V  +GRV+MR++  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Clc10G10980 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-127
Identity = 225/267 (84.27%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 2   AAMALSS-TFTGKAVPLNAPTELSSLVRSNGRVSMRRS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GKAV L   +  +S V  +GRV+MR++  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:

BLAST of Clc10G10980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903667.1	8.6e-150	99.25	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_008447450.1	1.0e-147	97.74	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_022998479.1	1.0e-147	97.36	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima]	[more]
XP_022948926.1	1.8e-147	97.36	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_02...	[more]
XP_022983188.1	8.8e-147	96.98	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]

BLAST of Clc10G10980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08221	2.0e-133	88.80	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P07369	9.9e-133	87.64	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P09756	1.3e-132	88.30	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P27492	6.4e-132	87.07	Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27497	1.1e-131	86.57	Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 ...	[more]

BLAST of Clc10G10980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAB9	5.1e-148	97.74	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1KEF6	5.1e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3BHH5	5.1e-148	97.74	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1GAK0	8.6e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J722	4.3e-147	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Clc10G10980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	8.0e-130	84.96	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT2G34420.1	5.7e-128	85.02	photosystem II light harvesting complex gene B1B2	[more]
AT1G29930.1	1.3e-127	84.27	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.7e-127	84.27	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.7e-127	84.27	chlorophyll A/B-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 1.4E-90 score: 304.6
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 2.5E-49 score: 167.9
None	No IPR available	PANTHER	PTHR21649:SF97	CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC	coord: 2..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G10980.2	Clc10G10980.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding