Clc10G10180 (gene) Watermelon (cordophanus) v2

Overview
NameClc10G10180
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionLYR motif protein
LocationClcChr10: 22934318 .. 22937663 (+)
RNA-Seq ExpressionClc10G10180
SyntenyClc10G10180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATTTTGGTGGCAAAAAAAGAAAAAGGTAGTTATTAATGAATAAAATTTGATTGTGAAATGTAGCAGAAATTTGGTAAGGTTTGGAAAGAAGTAGAGTTTAAGTAAAAAAATAAAAATAATAGGCGTAGATTGTGGTGAGGAGGAAATGTGTGTATATGAATGAGATTTAACCATAGAAATAGAAGGCAATGGCAATGGCAAAACCAGAAACTTAGGAGGAGAGTCCAGACAATTCCTTTTTTCTCCTTCTTCATCTTCTCCCTCATTTTCTCTCTTCAAAGTTCAATTCCATCATGGATTCCCATCTCTGAACCCTCTCCTTTTCCATTCTTCCCCATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATGCTTGGAGCCCTTTCCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCCGCTCCCACTAACCCTAAACCCTACTACTCTTCCACTCCTCTCCACACCAAGCGCCCTTGTCTCTCTGATCGAACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAACCTTCTATTGCCGCTGGCTGTTACACCCGTCGCAGCTTCCGATTGATTGCTAGAAAGCGCCGGCGGCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACCAGACGGTGCTGCTCTGTTGGGGCTTCGGCGGCTCATGGGACTTGCTCGGATTTCCCTCTCGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGAGATGCCAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTTGAGGAGGGAGAGAGAAGAAAAGGATCATTTGGGTTCTGGGTTTGGTTCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGCTGAATTTGGATATGGTGATGAGATTGATGAGGAGGATGAGGATGCCAGATTGCTTCTGTGGGGTGAGCGACTAGGAGGTTCGTTTCCTTCCTCTTATTCTTCTCATCACAATAGTTAATCACATCGATGGGTTAGACTAGACTACAATTTTAGTTTTGAATGTTGATGTTAGCCTGATAATTTAGGACAATGCTGTTATGACAGTTGCTAAATACCTCCTTAGATACTTGTTTTCAGTACAAGTATTTGGACCTCTAACTTTAGGAGGAGTATGTGCCAACTACCGCTAAACATGTTAAGCCTAAGAAATGGACATATGAGTTTCTAAAACATATATTTATGGTTAAATCGTACCAATACCATAAACTTTAAGTTACGTTTCTATTATTATTCATTTGTACTTTTGAATTTTAAAATTGTTCCAAAGAATAGATGTGAAATTGTTCAAAAATATCTATTTTTCCCTAATAAACGATGGAAGTTAATTTACTTGATGTCACATATGCCATTTGTGTTATGAATATACATATATGTTATGAAAAACAAAATAATTTAACGTATATGTATAGAAAAGTTCATATATTTTTATATCTACCATGCCGTGTCCCAGATTTTTAAAAGGCGATGTTCATCCATGCATCCATGTCTATCCAACTTCTTTGATTTTGAGATTTTTTTTTTAGCTAATCCTTAAATTTGAAATGTTAACTTTGAGTTTGACTTCCACGGTTTCTGATATCTTATTGACTTAAGATAGATCTTTTATCAGTTTGTTTTGAAATGATAAACAAAATGTAGGGAAGAAGTGTAGGAGTTCGATACACTAGTGAAAAGAGGAATATTGGACAGTCATCTTATTGTCTGGTTATAGCCGATGGTTGTCTAACATGTCACTTCAACATTTAGCTAAGGATGTTTACAATAAATTTGAACTTTAGAAACTAATGTTGTAATTTAACGGAGCATGCTTTTGAGGGTTTATATAAAACGTTTTGTTTTGTGGGGAAAGCTTATGGTTGAGCGATTTATAGCACCTTGATGGACAAGGTTCATGGCAGCTTCTAGATTATAACCATCTTGTGAAACATGTCCATTTATTTTGTGGAGCATGATGTACATCTTGATTGAGTAGCTTTTTGAACCTTTGATCTGACATTTAGCATTCTATGGTCTGAAAGCTATATGCCTCCTAATTCATAGAGGTCAATAGAGGTTCTTACTTTGATCTGATATTTTGTTGGCTTGAAAAGAGTTAATAGAGGTTCTTACTCCACGGCACTCTATGTTTCACCTTTGGATGTCAACGAAAGCTTCATCTCTAATGACATTAAATTGTGTTGTTTTCTTTTTCTAGTTCTGTTGGTGGATTTGTTTAGAAAGGTTGCACAACGTGTGATAAAAAATTGTGCTGTCCTTTGTGCTTAAGATCAAATAACCTCGAGAACAACTATTTTGGGACTGGCTCCAGAATAGAATTAAGGTGTTAGAAATGGATGATTTGTAGATGTAGTATTTTATTACATTCGGTTTTGAATATGAATTTTATCTTATCTAGCCATTTATATCATCGTTAACTTTTCATCTATGCTTTTGGTTATGACAACTTTAGGCAATTTATGTCCTAGAGAAATTTTCATTGAAAGATGAGAACATAAGTTATCATAGAAAATCCAGCAGACCCCCTCCATAAATGACTCTTTGCTATTGGTAGAACTTAACAAGTTCATTTACCTGTCTTCTTCCTTAAATGACTGTCTCCTGTTTAATCTGCATTTCCTGCCTTCCTTTTGCCCAAAAATGACCTCTGGCATATCAATGACCAATGAGAAGATTAAACGTTTGATTCCGAGTTTCTGATATGCACATACAGTCCCCTTTTTCTGGTTCAAAATCCAAGTTGAACAAATGACTGATATGATCACATTCTTTGCAGATGCTAGAATGGAAATTGTAGGAGAGAACACATTTGCAGATCAGAAATCACACCATAGATGTCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGAAGCAAACATCAAAACAAAAGCGGCGAACACTGTGAATACTCCTGATGCTGATGGTCCCTACCTGCTGGTATGCCTCTGAGACCTGAATTTTTGTACTCCAAAGTAAAGATTCCCCAGTTTTGAGAGTCTGCTCAAATTCCAGTTACAGCATCTAGATTTTTCTTTCATATTTAGAACACCACCTTTAATGCATCTACAGCGAAGAAAACATAATCCCATTGCCAAATTATCTCGATAGTTTCTCAGCTTAAGAAGTAAACTCTTTTGTATCTGTCTTGACAGAGTTGTGAAAAAGGCTTGAGTTCTTCTTAAGTCAACTTAGTAAATACAACTTTTGACCA

mRNA sequence

AATATTTTGGTGGCAAAAAAAGAAAAAGGTAGTTATTAATGAATAAAATTTGATTGTGAAATGTAGCAGAAATTTGGTAAGGTTTGGAAAGAAGTAGAGTTTAAGTAAAAAAATAAAAATAATAGGCGTAGATTGTGGTGAGGAGGAAATGTGTGTATATGAATGAGATTTAACCATAGAAATAGAAGGCAATGGCAATGGCAAAACCAGAAACTTAGGAGGAGAGTCCAGACAATTCCTTTTTTCTCCTTCTTCATCTTCTCCCTCATTTTCTCTCTTCAAAGTTCAATTCCATCATGGATTCCCATCTCTGAACCCTCTCCTTTTCCATTCTTCCCCATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATGCTTGGAGCCCTTTCCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCCGCTCCCACTAACCCTAAACCCTACTACTCTTCCACTCCTCTCCACACCAAGCGCCCTTGTCTCTCTGATCGAACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAACCTTCTATTGCCGCTGGCTGTTACACCCGTCGCAGCTTCCGATTGATTGCTAGAAAGCGCCGGCGGCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACCAGACGGTGCTGCTCTGTTGGGGCTTCGGCGGCTCATGGGACTTGCTCGGATTTCCCTCTCGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGAGATGCCAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTTGAGGAGGGAGAGAGAAGAAAAGGATCATTTGGGTTCTGGGTTTGGTTCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGCTGAATTTGGATATGGTGATGAGATTGATGAGGAGGATGAGGATGCCAGATTGCTTCTGTGGGGTGAGCGACTAGGAGATGCTAGAATGGAAATTGTAGGAGAGAACACATTTGCAGATCAGAAATCACACCATAGATGTCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGAAGCAAACATCAAAACAAAAGCGGCGAACACTGTGAATACTCCTGATGCTGATGGTCCCTACCTGCTGGTATGCCTCTGAGACCTGAATTTTTGTACTCCAAAGTAAAGATTCCCCAGTTTTGAGAGTCTGCTCAAATTCCAGTTACAGCATCTAGATTTTTCTTTCATATTTAGAACACCACCTTTAATGCATCTACAGCGAAGAAAACATAATCCCATTGCCAAATTATCTCGATAGTTTCTCAGCTTAAGAAGTAAACTCTTTTGTATCTGTCTTGACAGAGTTGTGAAAAAGGCTTGAGTTCTTCTTAAGTCAACTTAGTAAATACAACTTTTGACCA

Coding sequence (CDS)

ATGAGATTTAACCATAGAAATAGAAGGCAATGGCAATGGCAAAACCAGAAACTTAGGAGGAGAGTCCAGACAATTCCTTTTTTCTCCTTCTTCATCTTCTCCCTCATTTTCTCTCTTCAAAGTTCAATTCCATCATGGATTCCCATCTCTGAACCCTCTCCTTTTCCATTCTTCCCCATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATGCTTGGAGCCCTTTCCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCCGCTCCCACTAACCCTAAACCCTACTACTCTTCCACTCCTCTCCACACCAAGCGCCCTTGTCTCTCTGATCGAACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAACCTTCTATTGCCGCTGGCTGTTACACCCGTCGCAGCTTCCGATTGATTGCTAGAAAGCGCCGGCGGCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACCAGACGGTGCTGCTCTGTTGGGGCTTCGGCGGCTCATGGGACTTGCTCGGATTTCCCTCTCGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGAGATGCCAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTTGAGGAGGGAGAGAGAAGAAAAGGATCATTTGGGTTCTGGGTTTGGTTCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGCTGAATTTGGATATGGTGATGAGATTGATGAGGAGGATGAGGATGCCAGATTGCTTCTGTGGGGTGAGCGACTAGGAGATGCTAGAATGGAAATTGTAGGAGAGAACACATTTGCAGATCAGAAATCACACCATAGATGTCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGA

Protein sequence

MRFNHRNRRQWQWQNQKLRRRVQTIPFFSFFIFSLIFSLQSSIPSWIPISEPSPFPFFPMSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKDHLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARMEIVGENTFADQKSHHRCRRKKHECRMVDALR
Homology
BLAST of Clc10G10180 vs. NCBI nr
Match: XP_038906083.1 (uncharacterized protein LOC120091971 [Benincasa hispida])

HSP 1 Score: 520.0 bits (1338), Expect = 1.5e-143
Identity = 262/269 (97.40%), Postives = 264/269 (98.14%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCLS 119
           MSRRALDSRQSIDSCTLKLH WSPFHLPKTLDSDTHSSAPTN KPYYSSTPLHTKRPCLS
Sbjct: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTNSKPYYSSTPLHTKRPCLS 60

Query: 120 DRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRSG 179
           DRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRS RLIARKRRRRGSRSVSGRSSDRSG
Sbjct: 61  DRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSLRLIARKRRRRGSRSVSGRSSDRSG 120

Query: 180 TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKDHLG 239
           TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKN RREREEKDHLG
Sbjct: 121 TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLG 180

Query: 240 SGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARMEI 299
           SGFGSSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD++MEI
Sbjct: 181 SGFGSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSKMEI 240

Query: 300 VGENTFADQKSHHRCRRKKHECRMVDALR 329
           VGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 VGENTFADQKSHHRCRRKKHECRMVDALR 269

BLAST of Clc10G10180 vs. NCBI nr
Match: XP_004152251.1 (uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical protein Csa_015327 [Cucumis sativus])

HSP 1 Score: 483.0 bits (1242), Expect = 2.0e-132
Identity = 249/270 (92.22%), Postives = 253/270 (93.70%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 119
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 120 SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 179
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 180 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKDHL 239
           GTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKN RREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 240 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 299
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 300 IVGENTFADQKSHHRCRRKKHECRMVDALR 329
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of Clc10G10180 vs. NCBI nr
Match: XP_008454343.1 (PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo])

HSP 1 Score: 483.0 bits (1242), Expect = 2.0e-132
Identity = 249/270 (92.22%), Postives = 253/270 (93.70%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 119
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 120 SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 179
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 180 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKDHL 239
           GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKN RREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 240 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 299
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 300 IVGENTFADQKSHHRCRRKKHECRMVDALR 329
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of Clc10G10180 vs. NCBI nr
Match: XP_022949469.1 (uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata])

HSP 1 Score: 474.9 bits (1221), Expect = 5.5e-130
Identity = 248/274 (90.51%), Postives = 251/274 (91.61%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFH----LPKTLDSDTHSSAPTNPKPYYSSTPLHTKR 119
           MSRR LDSRQSIDSCTLKLH W PFH     PKTLDSDTH S PT  KPYYSST LHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 120 PCLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSS 179
           PCLSDRTTSFNVDAIDMS LSLIDDDKPSIAAG YTRRSF LIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 180 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEK 239
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKN RRER+EK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 240 D-HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGD 299
           D HLG GFG SNGG DAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD
Sbjct: 181 DHHLGGGFG-SNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240

Query: 300 ARMEIVGENTFADQKSHHRCRRKKHECRMVDALR 329
           +RMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 SRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

BLAST of Clc10G10180 vs. NCBI nr
Match: XP_022155253.1 (uncharacterized protein LOC111022393 [Momordica charantia])

HSP 1 Score: 474.9 bits (1221), Expect = 5.5e-130
Identity = 245/272 (90.07%), Postives = 252/272 (92.65%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHL---PKTLDSDTHSSAPTNPKPYYSSTPLHTKRP 119
           MSRRALDSRQSI+SCTLKLH+W PF L   PKTLDSD H+SAPTN KPYYSST LHTKRP
Sbjct: 1   MSRRALDSRQSIESCTLKLHSWRPFQLHAAPKTLDSDVHNSAPTNSKPYYSSTGLHTKRP 60

Query: 120 CLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSD 179
           CLSDR TSF+VDAIDMS LSLIDDDKPSIAAGCYTRRSFRL+A KRRRRGSRSVSGRSSD
Sbjct: 61  CLSDRATSFSVDAIDMSRLSLIDDDKPSIAAGCYTRRSFRLMAGKRRRRGSRSVSGRSSD 120

Query: 180 RSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKD 239
           RSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKN RREREEKD
Sbjct: 121 RSGTRRCCSVGASAAHGTCSDFPVAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180

Query: 240 HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDAR 299
             G     SNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+R
Sbjct: 181 SFG-----SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 300 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 329
           MEIVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 267

BLAST of Clc10G10180 vs. ExPASy TrEMBL
Match: A0A0A0KT54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 9.7e-133
Identity = 249/270 (92.22%), Postives = 253/270 (93.70%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 119
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 120 SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 179
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 180 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKDHL 239
           GTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKN RREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 240 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 299
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 300 IVGENTFADQKSHHRCRRKKHECRMVDALR 329
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of Clc10G10180 vs. ExPASy TrEMBL
Match: A0A1S3BYD4 (uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 9.7e-133
Identity = 249/270 (92.22%), Postives = 253/270 (93.70%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 119
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 120 SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 179
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 180 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKDHL 239
           GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKN RREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 240 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 299
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 300 IVGENTFADQKSHHRCRRKKHECRMVDALR 329
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of Clc10G10180 vs. ExPASy TrEMBL
Match: A0A6J1DMG8 (uncharacterized protein LOC111022393 OS=Momordica charantia OX=3673 GN=LOC111022393 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.6e-130
Identity = 245/272 (90.07%), Postives = 252/272 (92.65%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHL---PKTLDSDTHSSAPTNPKPYYSSTPLHTKRP 119
           MSRRALDSRQSI+SCTLKLH+W PF L   PKTLDSD H+SAPTN KPYYSST LHTKRP
Sbjct: 1   MSRRALDSRQSIESCTLKLHSWRPFQLHAAPKTLDSDVHNSAPTNSKPYYSSTGLHTKRP 60

Query: 120 CLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSD 179
           CLSDR TSF+VDAIDMS LSLIDDDKPSIAAGCYTRRSFRL+A KRRRRGSRSVSGRSSD
Sbjct: 61  CLSDRATSFSVDAIDMSRLSLIDDDKPSIAAGCYTRRSFRLMAGKRRRRGSRSVSGRSSD 120

Query: 180 RSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEKD 239
           RSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKN RREREEKD
Sbjct: 121 RSGTRRCCSVGASAAHGTCSDFPVAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180

Query: 240 HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDAR 299
             G     SNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+R
Sbjct: 181 SFG-----SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 300 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 329
           MEIVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 267

BLAST of Clc10G10180 vs. ExPASy TrEMBL
Match: A0A6J1GCW8 (uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452804 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.6e-130
Identity = 248/274 (90.51%), Postives = 251/274 (91.61%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFH----LPKTLDSDTHSSAPTNPKPYYSSTPLHTKR 119
           MSRR LDSRQSIDSCTLKLH W PFH     PKTLDSDTH S PT  KPYYSST LHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 120 PCLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSS 179
           PCLSDRTTSFNVDAIDMS LSLIDDDKPSIAAG YTRRSF LIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 180 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNLRREREEK 239
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKN RRER+EK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 240 D-HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGD 299
           D HLG GFG SNGG DAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD
Sbjct: 181 DHHLGGGFG-SNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240

Query: 300 ARMEIVGENTFADQKSHHRCRRKKHECRMVDALR 329
           +RMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 SRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

BLAST of Clc10G10180 vs. ExPASy TrEMBL
Match: A0A6J1J7N4 (uncharacterized protein LOC111482487 OS=Cucurbita maxima OX=3661 GN=LOC111482487 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.6e-127
Identity = 242/272 (88.97%), Postives = 253/272 (93.01%), Query Frame = 0

Query: 60  MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCLS 119
           MSRRALDSR+SI SCTLKLH W PF LPK LDSD H+SAPT+ KPYYSS+ LHTKRPCLS
Sbjct: 1   MSRRALDSRESIHSCTLKLHGWRPFQLPKALDSDAHTSAPTSAKPYYSSSGLHTKRPCLS 60

Query: 120 DRTTSFNVDAIDMSALSLIDDDKPSI-AAGCYTRRSFRLIARK-RRRRGSRSVSGRSSDR 179
           DRTTSFNVDAIDMS LSLIDDDKPSI A G Y+R SF+LIARK RRRRGSRSVSGRS+DR
Sbjct: 61  DRTTSFNVDAIDMSGLSLIDDDKPSITAGGSYSRPSFQLIARKRRRRRGSRSVSGRSTDR 120

Query: 180 SGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKN-LRREREEKD 239
           SGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKN  RREREEKD
Sbjct: 121 SGTRRCCSVGASAAHGTCSDFPMAVGTDSSGELFVNGDANWSSDVSEAKNSRRREREEKD 180

Query: 240 HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDAR 299
            LGSGFGSSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+R
Sbjct: 181 QLGSGFGSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 300 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 329
           +EIVGENTFADQKSHHRCRRKKHEC MVD+LR
Sbjct: 241 VEIVGENTFADQKSHHRCRRKKHECGMVDSLR 272

BLAST of Clc10G10180 vs. TAIR 10
Match: AT4G02425.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 29 Blast hits to 28 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 265.0 bits (676), Expect = 8.0e-71
Identity = 163/278 (58.63%), Postives = 198/278 (71.22%), Query Frame = 0

Query: 60  MSRRALD-SRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCL 119
           MS + L+ SR SI+SCT +L +W PFH  KTLDS   S  P     ++S TP   KRPC 
Sbjct: 1   MSPKHLESSRSSIESCTSQLLSWRPFHRSKTLDS---SDQPPQTNGFHSFTP---KRPCF 60

Query: 120 SDRTTSFNVDAIDMSALSLIDDDK--PSIAAGCYTRR-SFRLIARKRRRRGSRSVSGRSS 179
           SDR+TSF ++A  MS LSL DDD    +++A  Y+ R SFRL+ARKRRRR SRSVSGRSS
Sbjct: 61  SDRSTSFTIEA--MSRLSLADDDNGGKTLSASNYSNRGSFRLVARKRRRRNSRSVSGRSS 120

Query: 180 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSE-AKNLRREREE 239
           DRSGTRRCCS+G   AHGTCSD P AVGTDSSGELF  G+ANW+SDVSE A+N RRER +
Sbjct: 121 DRSGTRRCCSIG---AHGTCSDLPFAVGTDSSGELF--GEANWASDVSEAARNSRRERRD 180

Query: 240 ---KDHLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGER 299
              +     GFG +N G D  GNESGYGSEPGYRGDAEFGYGDE D+E+ED + L WG+ 
Sbjct: 181 SGGEKEASGGFGFAN-GVDPMGNESGYGSEPGYRGDAEFGYGDEFDDEEEDVKPLFWGDT 240

Query: 300 LGDARMEIVGENTFADQKSHHRCRRKK-HECRMVDALR 329
             D+ M + GE  F+D K   RCRR++ H+ + VD++R
Sbjct: 241 --DSTMGMSGETKFSDSKPQFRCRRRRQHDYKTVDSMR 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906083.11.5e-14397.40uncharacterized protein LOC120091971 [Benincasa hispida][more]
XP_004152251.12.0e-13292.22uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical ... [more]
XP_008454343.12.0e-13292.22PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo][more]
XP_022949469.15.5e-13090.51uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata][more]
XP_022155253.15.5e-13090.07uncharacterized protein LOC111022393 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KT549.7e-13392.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1[more]
A0A1S3BYD49.7e-13392.22uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=... [more]
A0A6J1DMG82.6e-13090.07uncharacterized protein LOC111022393 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1GCW82.6e-13090.51uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J7N41.6e-12788.97uncharacterized protein LOC111482487 OS=Cucurbita maxima OX=3661 GN=LOC111482487... [more]
Match NameE-valueIdentityDescription
AT4G02425.18.0e-7158.63unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..239
NoneNo IPR availablePANTHERPTHR36775LYR MOTIF PROTEINcoord: 60..327

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc10G10180.1Clc10G10180.1mRNA