Clc10G09390 (gene) Watermelon (cordophanus) v2

Overview
NameClc10G09390
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTubulin alpha chain
LocationClcChr10: 21381504 .. 21392918 (+)
RNA-Seq ExpressionClc10G09390
SyntenyClc10G09390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAAAAGAAGTTGATCTACAATCCAAAAATCCTCTTAAATGAAATGCCCCTTGTGGAACTTTCTACACCAAGTGTATTCAATCATTGTTATCCCCACACATATACCTCTCTTCTTTCAACCTCTTTTTCAAAATAAAATAAAATAAATCCAAGCCACAAATAAATTCCCACTTTCGGCCCCACATGCGCAAATTAGTATCTAAGCTAATATCTTGCTGAAATGCGCACCGGCTGATGCGTATACGCTTTAATCGTCGCCTCCGCTTGCATTTCATTTTTTGTTTTTTTGCTTTTCTGGAAAAATTAAGATGAAACTATTTCTCCCATTGAATTCCTTGGGAGGAAGAAAGCTCTAGCTTGCTAATCCATGGCTACTCTGCAAATTCTCAAATCAACCGTTTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGTGCCCAATCAAGCCGGTTCTTCTCGGACTTGGATTCCACTAGGAGGTTTGTACTGCTCCATGGACGTCGGAGGAATTTGCGATATGGCTACGTTTGTAGAAGGTTTAGTTTCCGTTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGCAAGTTTTAACTGCTTCTCTTCTGCTTCTGCTTCTGCTTCTACCGGTCTTGTTTTTGTTATGTGTTTTTCTTGTTCAGTGCATTTGCTTTGATTGTATTTTCTTGGTGATTGAATGTTCGTTGTTGTAGACGTCGTTTTTCTTATATTGAAAGCTAGAGATAAAGATCAACTAATATCCTGGCCTAGATGAGGCAATGGTTATGGTTTGTTCGGATGGTCTGTCGTTCTCAGTCCTGAACTATCTTGCGTTGTAGACAATCGTGCGTGCATCCATGGTTATTTGTCCGCTATTCCTGGTTTATCTCTTTCAATGCATTTGCCTCGCTCGGATTTCTTCATGAATTCATGTTCGTCAGTGAGTTAGAGACACAGTAAGTAGCTTAAGCCTTCGATGAGCCGGAAGTTGCATGGTGTAGTTTGTTGTTCAGATGGTCCGTCGCTTCTGAATTATCTTGTTCAGTGGACAGTAGCTCAATCATGTAGCAAAATCGTGCGAGTATCCATCAAGTTATTTGAGTAAATGAGGAATGGAAGATGCTTGGGGCTATGAATAAGATTGCTTAGTTGGCACTCCAATTCTCTTTAGAGCTTTATTCTTGAATATATAGGCACGACTCCATAGATAAATTAAACCGGAATCTGAAAATCTAAGCTAAGAATTTTTTACGTTCAACATATTTTAAAAAACTTTTAGAGAGGGCGAAGCTAAGAGTTTTGTTATTCAGACAGAGAAAATTTGGTAGACGGATAAAACCTTCATGCCTATCAATGTCTGTATTAACCATCACTTGAATCTGTAATCGGAAGTCTTCATTGGTCCAATTTTTATAGTCGAAGCTTTTACTTTTAGGAAGCTACAAGTCTGTGCCATGCCAATAGTTGTAGTACCCGTACTTGTATTAGGAGTGGTAGCTGGGGATGCTTGTTTAGATTGCTCGAACAACTTTCGCATAGGTCCAGTTGTTGCTCCTTTAAGGAGCGTTTCCATTTCAGACGTTTGAGTTTTCTGCAGCTTGTGTAACAGAGGCATGGTTTGCTTGGCCCTCCTGTATGGAGGCTCAGAAGGCTTTCAAGCCTATTTCCGATGAATTTACCTAGCCAGTCTCTTTATATCATCTTCCCACCATGTTCACATCTGGCCTTTCCTTTCTTGGTCCATTGTAGAGGAACTATTACATGTTAGAGCAGAGCTTTTAGCGTTCACCTGATAAGATGTTCCAAGCAAGTTTGTATCTGCCTCAATAGTGATGTCTCTAATAGTAGGTCTCAGTGGTAGGAGTTTTCACATTCGTCATTAGGAACCTGAAGATTCTCTTTCATTTCTAATTCTTTTTTATGTAAGTTATACGTTCCCATTCATGTATTTCATGTAAATCAAGTCTGTCATGCCACAACTAGCGCACAAGAAGACTTTAATCTCTAGTTCGGGACCGGTTAATCACCCTGTTGTAGGTTATGGAGAATGATTTTTTTTTTCTTTGAAGCAAAAAACAACTTCTCATTGATGTAATGAAAATGATTGAATGTTTAGGAGACACAGAACTCTCACAAGGAGAGAAAAAGAAAAGATACGATCAGCCAATACAACAAAAAATAGATAAACATTCGAAACAACTTCGACCTACAAGCCTCTTTCAACTGCTGAGAAAACAAAAGCTACTACAATACAACCAAAGAAACCCAGAAAATGGCCACCAACCAACAAAAGACCAACATAGAGCAAACCGAAAACCCTTGAAAAAAAAAAAACCTTCTCCTGCTCAACAGGAGAATGAAACAGAGCCCAACAAGTAATATTAAAACTGCCACCACGGAAACTAAACAGCTAACAAGAAAACAGCCACCCTTTATATAGCAACCCAAAAGAAAGTAAACCCACGATCTCTAGTATTCAAAGCAAAAATCCAACTCTTATTGACAAACAAGATGCCTCAACTCCTTAGAACTTTACGATAGGGGAAAAGGAGTGAGTTTCTTTGAGTTGTAAACCACAAGCCTTAATTAAATGCAAAAACTTTGAAGGAACTGGGGAATGAATTGTAACTGGTGACAAAAGTTGAGAAGCCATGGTCAAATTATCTTCATCTTCCTTAAATAATGTCTCAAAACTCAAAAGCATTAACAAATGAATCCACAAGATAAGCATCTTCAAACACTCTTTTGTGTTTTCCAAGGTTAAGGAAAGTAATGTAAAGCAACTTAAATCATTCTCCATAACAAGAAACAAGGTTATGGAGAATGATTTCAATTTTGAAGGACTCTTTGTGTTTTCCAAGGTTAGAGAAGTTGCTTTGGCTACACCTATGATCTCTATAGATGCCTGATATGATAGAAATCTTCTGTCAATCTTATTTGTCATGGAGTTGACCAACCATGCTATGACTGTATTATTCGCTGCTTCCCTTCCTTCGTAGTCAATCTAACCATTGTAATTAGTTTTCGCATTTAGTTTGTGAGTACTGATGGGTATGCAGCACCTTCCGAAGCCATCACAACCATGCATGTGTGTATAATATATTACTTGACATGATTTTTTTTTTTTTTATTTACTTTTTTTTTTTTGATAACCGGGAGTCGCAGTTGTGCTCCCTATACCCAGGGCACCTACACCCGCCCCAAGGCTCTGGAGTTGAATGTAGTGAAGAATGTTTTTTGCTTGAGACCAATTATGTCAATTTAAGCTGCTTTACATTACTTTCTTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAACGGTGACTTCAGACTCGGTGGCGAGATGACTGGAGAAAACAGAGATTTCTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGGCTTGAGGTTAATTTCCTAAGGATTTTATTGGAGTCTAATGAATATGCTCATGTCATCTGATCTATTTCGTTTTTTACTGTATCCTTGTTTGACGAGTTCTGACCCAAATAACCAGAATTTGGTGACTAGTTAATGAAAATATTACTACTATTCCAACAAGATTATTGAAAGACCGGCCGGACATGCAAAGCCAAAATCCTAAAGAATGGATCTACGGAAAAAGAATTACATAGATTGGGTCCAAACGTTGAGAACCGTCCAAAACTAACGGACGGCCAAAAACTCTCTGAAGCTAAAACCTAAACGGAAGCATTGTAATGAGCCAAGTTTCACACATCCTTCCATAGCCTCTCTGTGACTCTGTCCCTAAAAGTCCTCATATTTCTTTCCAACTAAATACTCCAAATAAAAGAATATAATTTGCCTGCCGAAGAACCTTTCTGTTGTTACAAAAGGGAGGATGAAAACTAATCTCCTCCACACATCAGTTAGTGTGTGATTAGAAATGAAAAGCATATTCCAGGTGCCTGAAAATTTTCTTCCAAATCTTCATAGGAATCATGCTTCAAAGCTCTTTGGATGTGCCTAGATCACAGCATTGAAGTCAAACCACGGAGGACAATTTTAAATAAATCCATGACATTGATTCTCCACAGGTAAAGAGAAGAACCTAGCCAAGAGTGGATTTTAACATTCTTCAAGCGCAAGGCCTTCCCTAGCTTAGGAAAAGGAAATAAATAAAACCCTTATATCCTAGTGATGAAGAGATAAATACGACACCCTGCTTGATGTTAAGCTCTGTCAAATAAAGTTTTCTTCCTACTTCCCGAAAGAAAAAAAGAAATCAACTGCAGAAATTTTCTTAATTGAACCCCCTCCCACCCCCCCACCCACAGAAAGACCTGCTTTCTATTGGAAAACACCACCATACATGAAGGCGAAGATAATGAAAGAAGAAAGTGCCAGAACCCTTTCTCCCAATAAAAACAAAATCACTAGCAATCTTTTGGATGGTGTAAGTGTAACTTTGACCCGTCAATGCCTCATTATTGGAACCAACAATGCAGTTAAATCTTTAGCAAGCAAGAGTCGGTTATGGAGTATCCAATCAGTAGAAAACATCGACATATTTTGAGAGTTAGGTTTTTTTTTTCTTTAAGGAAAATCTGATTTTAAGGTTTAACATAGAAGTCTGCAGTATTTGAGTTCTTAAGATTATGTCGATAGTATTGCCATAAGGTGACGTAGTTAAGGATGATGATTGGCACGTTTAAAAGAGAGATTAGTCTCCATCTCTGTTAAATCACCCATCAACTTAAAAGTTTTAGTTGATGGGTTACGGTAAATTTAATTATATCAATGCTGTAATACTCTCCCTTACATGTACGTTTGAAAATTCGTAGAATGTCCAACATATGGAAATCAAAATTAAAGAGGAAATAACATTACACTTCTTTCTTTGAGACCATGTTAGATCATCAATTAACCCAAAAACTTAAACAAAATTATATCAATGCTCTAACAGTCTCATTTGATTATATTTAGTTCTCTTTAATTCCTATCAGTAGGGCAATTACATATTTCAGTCTATATATTGTAGTTTGAATTCATTACATTTGGTTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTGTAAGTTTCCTTTTTCACTGATTACTACAGAGGAGGTGGACTTACAAAACCTTAAACTAAAGGCAAACTAACAATTGTTGTGTAAAATTTAATGCAGTTTCTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTGGAAGACGAGAGAATTTCTTCACAAATAGCTCCTCGTGTAAATTGACTGCCGCATAAATTCCTAATTGGTTGGTTTTCTTTTCTGCTACTTTGTTTTCCTTTCCCAATATTGATTAATATGATATGTATATGATTATTAGCTAGAATTTTCTTGTTTAATTTACATTTTCAAGACTCTCGTCTGCCGCCCTAAATTATTTCTTCAAAGGCTTTAGATATGCGAGGTAGAACTGAACTTTTGACCTCAAGCTTGATTAACATGCCTTCATTGCTTTTAAAGGCTTTAGTTGATTCTTTTTAGTTTGCAGTTGTAGCTTTAGTTTATTTCAAAAAAGAAAAAAGAAAATGGTAGTTTTGAAATTTGATAATCATTTGGGCCATGTTTGATATTTATTTTATTTTTATTATTTTTTATCTATATAACTAAACTTATACTATTTCGATCTATTGACTTTTTTTTTTGTTCTACCAATATTTTCAAAGTTTAAGAAAAAATTATCTTAAATAGCAAAATTGCTAAAGATATTTGCAACTAATAGCAAAATCCAGTCTATCTGCGATAGATCGCGATAGACTATTATCTATGTCATGTGACACAGGTAATAGTCTATCACGGTCTATCGCAAATAGACAGTGAAATTTTGTTATATTTGTAAATATTTTTATTCATTTTGCTATATTTGAAAAAATTCCAAATTTATGTTAAATTTTTTCTTAAAAAAATGCTTTCAATAAATTTCAAAACTATAAAACTAAAATGAAATCATTATTCAAATGGAGCCTTAGTTTTTTTAAATTGTGTATGTTTTTTCATATTTATTTGCAATAGTTTTCATCTTTAATTCAAAAAACATTTGAATTTATACTCAAATTTCAAAAGAAAAATAAGTTCTTAAAAAGGTATTTTATAAACAAAGAAACATATAGGGTAGTGATTTTTTTCTTTTTAATACAACTGGGGTAGAAATTCAAACCACAGACTTTGTGGTTAAAAATTAAAAAATAGGATAGTTATCCATAAAAATTTGAGTCGGTGTGAATTTGGTAAAATTTAGTGTATTTGTGTAGGTTTATGCAATTTGTAAGGATCAGAGTAAAGAATAATTTTTTCGAAGAAAAAATAAATAAAAGGAGACTTCTTGACTTCGAAGTTACGTTGTAGATTTTTTTTTTTTTTTGAATCCGTACACAGTTACGTTCTAACTACTTTTTTATATAGTTCAAATTTTACGTTCTTACCTTTTTCATGCTTGTGGGCCGTCTTTTCAGGTGGAATCCTTTTATATTGTGGGGTTATACGCCGAACTGTTTTTTTTTTTCTTTTTTTTTTTTTCCTTTCAAGTTATCATAAAAAAGCAAAAAAAACAAAAACAAAACAAGGTATTTTTATACCCCTACACTTCGAAGTTAAATTTAGAAACGAGCATTATTTTGGAGGAAAAGAAAACTGACATTTAAAAATTAGCATCGGAGTTGAATGTATAAATCTAACTGATTGACCAAATCACAAAATTATTATATAAGAACTAAAATAACTTCCTCTGTTTCTTTAAAAAAAAATATACTATTGCAAAAATTTAAAATTTGGGTAAATATCAATTAAAAACCTTGTCTGTCAAAACACCCAAATTTGGGTAAATATCTGCCTCCCCCAGATTGTGTGAATTGGAGTGAATACATAACTCCAGTCTTGTCTTATTAGTATAATGGACAATAAATGAATTTTATAATATAAATTTATATTTTCCCCTAAAATTAGCTTCTTTTGGGAACTTTGATTTCGAACTAATTCTTCAAAACTTTATGATCAGTTTTGGTTAAAAAAGCCACGTTATTCTCAAATATTTTCTCCACCGCAATCCCAGAAGGCAATCAACGGCACAATACAAAATAACATTAAAATCCAATGCCATTTATATAAAATAGCAATTTGATTTAAAAAAACACATAGGGTTGTTCACAAAAGCCTTGGGAACAAGAAGTATCACAATAACATTTCAAGTAAAGAGAAAAAACAAAAAGACACAAGACGGACACCAACACCACATATAGCAAATATGCACCCACCAACACTCCCTTAACAATGAGGCGAGATCGGGCTAACATCTTTAGTAGTCCTCTCCTTCATCATCCTCACCCTCAGCTGATTCAGCACCAACCTCTTCATAGTCCTTCTCAAGGGCAGCAAGATCCTCTCGGGCTTCAGAGAACTCACCTTCCTCCATACCCTCACCGACATACCAGTGCACAAAAGCACGCTTAGCATACATGAGATCAAACTTGTGGTCAATACGAGAGAAGACCTCAGCAACACTGGTAGAGTTCGAGATCTTGCAGACAGCTCTCTGCACCCGAGCAAGATCACCTCCAGGGACAACAGTAGGTGGCTGGTAGTTGATACCACACTTGAATCCAGTGGGACACCAATCGACAAACTGAATTGTACGCTTGGTCTTGATGGTGGCAACAGCAGCATTGACATCCTTGGGCACAACATCACCACGATACATCAGGCAGCATGCCATGTACTTACCATGTCGGGGATCACACTTGACCATCATGGACGAGGGCTCAAAGGCACTGTTGGTGATTTCAGCCACTGAGAGTTGCTCGTGGTAGGCCTTCTCAGCTGAGATCACTGGTGCATAGGAGGAAAGCATGAAGTGGATTCTTGGATAAGGGACCAAGTTGGTCTGGAATTCGTTCACATCCACATTCAGAGCACCATCAAACCTCAAACTGGCAGTTAAAGATGAAATGACCTGAAATTATATCGTTCATGTAAGTCCACGAAAGTAATTGGTGTTCATAATACCATGATAGATATGATTCGAAAATATTTTGAGTAGTTACCTGGGACACAAGACGGTTGAGATTAGAGTAGTTGGGTCGCTCAATGTCAAGGGAACGCCTGCAGATATCGTAAATAGCCTCATTGTCAAGGAGCACAGCAACATCAGTGTGTTCCAAGAGAGAATGAGTTGAGAGGACACTGTTGTAAGGCTCAACAACAGAAGTTGAAACTTGAGGAGAGGGGTAAACAGTGAACCCAAGCTTGGATTTCTTTCCATAGTCAACTGACAAGCGCTCCAAAAGGAGGGAGCCAAGACCGGAACCAGTACCACCACCAACAGCGTTGAAAACAAGGAATCCTTGAAGACCAGTGCAGTTGTCAGCCAACTTACGGATCCGGTCCAAGCAGAGATCAACAATTTCCTTTCCAACTGAAACAAGATATAAAAGCATTAGTAAATGAAGAAAATATTTAATCCATTTCTAACAAGAATTCAAGATCAAGATTGGGAAAATTACCGGTGTAGTGACCACGGGCAAAATTATTGGCAGCATCTTCCTTGCCACTGATCAGCTGTTCAGGGTGGAAGAGCTGGCGGTAAGTTCCTGTCCTCACCTCATCGATGACAGTAGGCTCAAGATCAACAAAAACAGCACGGGGAACATGCTTTCCAGCACCAGTTTCACTAAAAAAGGTGTTGAAAGCATCGTCACCTCCACCGAGAGTAGTATCTCCAGGCATTTGACCATCGGGCTGCGCCAATTTACAAACATGACTTAGAGAATTCGATTGCGCTGAAGCTTTAATCGGTATAACAAATATCCAAAGATGTAATTATCCTCACATATCACAAAGTCCATAGATCCGCAAACCATAAAAAAATTCTTCACATGCGTGAATTCAAAAACATGAAATGCAAAAAAACGTACACAACCAACAAATTGCGGCAGGAAACGTTATCTATTTCAAGATCTCAGAGTGCAGATCAACAATTATTACATTTCTCCAAGACGACATCGAGTTACGATTGAATACATGATAGATTTATCAGATTTACAAATATTAAACACATATTAACGAAGATCTGTTAATAAGACATATAATCTCATGTAATGGGGGGATAAAAACACGGAATAAATCAAACAAATTATGAAAATCCACATAAACCACTCGATGCGAGCGAAAAAACACGTAAATCCACCTTTTAACAACAAAATGCAGCCCAAAACCAGACTAGATGCAGAAATGCCGACAATTTTTCACAGATCGAGTGAATGAAAGGCAAACGACAAAAATCAAACAAAAAATCAAGCCAAAACGACAAATCCTTACAGATCGAGTGAATATAAAACGCAAATAACAAATCTGAAGCCAAAGAAACGCCAGATCCAGAAATGTGAACAACTGTGAACAGATCGAAGGAATGAAAGTCGAAAAAGAGAGTGTAGAATACCTGAATACCATGCTCGAGGCAGTAGAGCTCCCAGCAGGCATTGCCGACCTGGATACCGGCCTGACCGATGTGGATTGAGATGCACTCTCTCATTTTGAGTTAGAGAAACAGGGGAATGAAGAAGAGATCTGAGAAGTAAATGGAGAGGACAAAGAAAATCTCGCGAGAGGAAGAAAGACGTTTGTGAAGACGCCTTCCCCTTTGAAACCCTTTTTTTTCTGAAGGATAGACGGAAAGAGAAAGAGTGAAGAGACGTATTTATAGTGGAAGCCGGAGAGATCGTAAGAAGGATTAAGGAATGATTTTCTTTTTAACCGTTGGGGGAATTGGACGGCAGCTAAGCCTGAGTTGGTTAACTTTGGTTGGTTGAGAGTTAACCATGGTTAGGGTTTCGCTTTTTTCTCAATCGGTTTCTTTTTTTGAAATTTGAATTCGAGGTATTGGCGGGTAATGGGCTGGGCTTTGGGCTTGGATCCGGTTCTTACAGCTGGACCCGGTTGGCACTTTTTACGTGGGAAATTGGATAACATAGCAATATTTCAAGATTTGTGTACCCGCAAAATTTGAAAATAATAAGATTTTTAGCCAATCATGTGCAAGTTACTTGGGTGACATTTTGTAATAAGTGATTTGCTCTTAATGGGTTAGTATGTCAAAAATATCAAATACAATGTAATTGTTAGAGTTTAAATAATAACCGAGTTAAAAATACAATGTAAATGGTCATGCGTTAGTTATCAGATTATAACCTAACAGATTAAATTAAAACAAAAAAACAAGTCACCTTCCATATTCGTTGCCCCAATTTGAAATTTGAATTTAAATTTTATTATCAAATTAGATTTTGAGAACTACTTCTCGAATGGATTCAAAAGTAGTTCTCAAAATCTACTAATTCTTCTCCCACAATTTAAATTTGAAATTACCTTTTATTATCACTTTTGAGTTTAACTTACTAATTATTTTAAATGTTTGTTACCACATCTAATTGTAGAAGAACTGAAGTTGGAAGATTTTGTGTTTCATTCCAAGAAAAATGTCGAAATCAAAAATTTATAAGATTTGTTTTTTTTTTGTAAATCATGCACATATCAAGTGATGGACAATTTTTCGAATTCATGATTTTCCCTTTATAGATTTGTGGTTTTGTGGTTGTTGGAGTTATGAATACAATATAATTGTTGAAACTTAAATAATAATGAAGTTATAAATACAGTGTAATTGCTGAAGTTTAAGTTATCAAATTAATACATTGGCTAGCTTTTGACAACCACTCCTGCCAAGTCGTTGGCGTTGGTACTTGCACACGTGTCTCCTACTTTTGTTCTTGCTTTGAACATTGTTTTCAACAATGGTTGGCTTTCAATATTCTATGGGGAAACCGGTTACATGGAATGAAGATGATGAAACTCCCTACAACTAGTTTGACGTCAAACCCAATCCTAAATCCAATAGTCACATCGTCCTAACGTTGCAATTCCTTCAAATACTCACTTGCCAACAACTTCATTGTTACGATCAACCTTGCTCTTTCTCACCTTCGAGGAAGTTCATTGCTGTGGACATACATTAGTTTCTGACGACCTCGTCGCTTGGTTATCAGCTTCCCTCGCATGCACATGTCCTATAGGCCACCAAAAGCATTAAGGACCATATTGAGTAAATTTTTATTTTTTATTTTGGAATGTTTAGATAGAGTGTATTTGTGATATTCAAGTTGTGCAATGTATCTTTATATTCTCGTTTGTA

mRNA sequence

TTGGAAAAGAAGTTGATCTACAATCCAAAAATCCTCTTAAATGAAATGCCCCTTGTGGAACTTTCTACACCAAGTGTATTCAATCATTGTTATCCCCACACATATACCTCTCTTCTTTCAACCTCTTTTTCAAAATAAAATAAAATAAATCCAAGCCACAAATAAATTCCCACTTTCGGCCCCACATGCGCAAATTAGTATCTAAGCTAATATCTTGCTGAAATGCGCACCGGCTGATGCGTATACGCTTTAATCGTCGCCTCCGCTTGCATTTCATTTTTTGTTTTTTTGCTTTTCTGGAAAAATTAAGATGAAACTATTTCTCCCATTGAATTCCTTGGGAGGAAGAAAGCTCTAGCTTGCTAATCCATGGCTACTCTGCAAATTCTCAAATCAACCGTTTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGTGCCCAATCAAGCCGGTTCTTCTCGGACTTGGATTCCACTAGGAGGTTTGTACTGCTCCATGGACGTCGGAGGAATTTGCGATATGGCTACGTTTGTAGAAGGTTTAGTTTCCGTTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAACGGTGACTTCAGACTCGGTGGCGAGATGACTGGAGAAAACAGAGATTTCTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGGCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTCTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTGGAAGACGAGAGAATTTCTTCACAAATAGCTCCTCGTGTAAATTGACTGCCGCATAAATTCCTAATTGCTTTTGACAACCACTCCTGCCAAGTCGTTGGCGTTGGTACTTGCACACGTGTCTCCTACTTTTGTTCTTGCTTTGAACATTGTTTTCAACAATGGTTGGCTTTCAATATTCTATGGGGAAACCGGTTACATGGAATGAAGATGATGAAACTCCCTACAACTAGTTTGACGTCAAACCCAATCCTAAATCCAATAGTCACATCGTCCTAACGTTGCAATTCCTTCAAATACTCACTTGCCAACAACTTCATTGTTACGATCAACCTTGCTCTTTCTCACCTTCGAGGAAGTTCATTGCTGTGGACATACATTAGTTTCTGACGACCTCGTCGCTTGGTTATCAGCTTCCCTCGCATGCACATGTCCTATAGGCCACCAAAAGCATTAAGGACCATATTGAGTAAATTTTTATTTTTTATTTTGGAATGTTTAGATAGAGTGTATTTGTGATATTCAAGTTGTGCAATGTATCTTTATATTCTCGTTTGTA

Coding sequence (CDS)

ATGGCTACTCTGCAAATTCTCAAATCAACCGTTTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGTGCCCAATCAAGCCGGTTCTTCTCGGACTTGGATTCCACTAGGAGGTTTGTACTGCTCCATGGACGTCGGAGGAATTTGCGATATGGCTACGTTTGTAGAAGGTTTAGTTTCCGTTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAACGGTGACTTCAGACTCGGTGGCGAGATGACTGGAGAAAACAGAGATTTCTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGGCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTCTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTGGAAGACGAGAGAATTTCTTCACAAATAGCTCCTCGTGTAAATTGA

Protein sequence

MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFRCAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFALYFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN
Homology
[Close]
BLAST of Clc10G09390 vs. NCBI nr
Match: XP_022984914.1 (uncharacterized protein LOC111483048 [Cucurbita maxima])

HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 204/223 (91.48%), Postives = 213/223 (95.52%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFS+LDSTRRFVLLHGRRR+LRYG V RR SFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFFLGPSFVHD +KTPISPPPYVDPYALLEDERI SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERI-SQMAPRVN 222

[Close]
BLAST of Clc10G09390 vs. NCBI nr
Match: KAG6576903.1 (hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.7 bits (1005), Expect = 4.1e-105
Identity = 203/223 (91.03%), Postives = 212/223 (95.07%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFS+LDSTRRF LLHGRRR+LRYG V RR SFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFFLGPSFVHD +KTPISPPPYVDPYALLEDERI SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERI-SQMAPRVN 222

[Close]
BLAST of Clc10G09390 vs. NCBI nr
Match: XP_038905067.1 (uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida])

HSP 1 Score: 391.7 bits (1005), Expect = 4.1e-105
Identity = 204/223 (91.48%), Postives = 209/223 (93.72%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKSTVSPPSISQPNFG QSSRFFSDLDSTRRFVLLHGRRR+LRYG VCRR SFR
Sbjct: 1   MAALQILKSTVSPPSISQPNFGVQSSRFFSDLDSTRRFVLLHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQDADK+SNGEEPPESLFMKELKKRGITPTSLLEDTNN DF LGGEMTGENRDFSRRS
Sbjct: 61  CAAQDADKDSNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFFAL
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFF G SFVHD S+T ISPP YVDPYALLE+ERI SQ AP VN
Sbjct: 181 YFFFGASFVHDGSRTAISPPSYVDPYALLEEERI-SQRAPPVN 222

[Close]
BLAST of Clc10G09390 vs. NCBI nr
Match: XP_023552655.1 (uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 7.1e-105
Identity = 203/223 (91.03%), Postives = 212/223 (95.07%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFF +LDSTRRFVLLHGRRR+LRYG V RR SFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFLELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFFLGPSFVHD +KTPISPPPYVDPYALLEDERI SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERI-SQMAPRVN 222

[Close]
BLAST of Clc10G09390 vs. NCBI nr
Match: XP_022922737.1 (uncharacterized protein LOC111430640 [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 9.2e-105
Identity = 202/223 (90.58%), Postives = 212/223 (95.07%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFS+LDSTRRF LLHGRRR+LRYG V RR SFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFFLGPSFVHD +KTPISPPPYVDPYALLEDER+ SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERM-SQMAPRVN 222

[Close]
BLAST of Clc10G09390 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.9e-106
Identity = 204/223 (91.48%), Postives = 213/223 (95.52%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFS+LDSTRRFVLLHGRRR+LRYG V RR SFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFFLGPSFVHD +KTPISPPPYVDPYALLEDERI SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERI-SQMAPRVN 222

[Close]
BLAST of Clc10G09390 vs. ExPASy TrEMBL
Match: A0A6J1E457 (uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC111430640 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.5e-105
Identity = 202/223 (90.58%), Postives = 212/223 (95.07%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFS+LDSTRRF LLHGRRR+LRYG V RR SFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFFLGPSFVHD +KTPISPPPYVDPYALLEDER+ SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERM-SQMAPRVN 222

[Close]
BLAST of Clc10G09390 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.1e-99
Identity = 195/223 (87.44%), Postives = 203/223 (91.03%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQ+LKS VSP SISQPNFG +SSRF S  DSTRRFV  HGRRR+LRYG VCRR SFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAAQDADKESNGEEPPESLFMKELKKRG+TPTSLLED+N+ DF LGGEMTGE RDFS RS
Sbjct: 61  CAAQDADKESNGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFF GPSFVH+  +TPISPPPYVDPYALLEDERI SQ APRVN
Sbjct: 181 YFFFGPSFVHN-GETPISPPPYVDPYALLEDERI-SQTAPRVN 221

[Close]
BLAST of Clc10G09390 vs. ExPASy TrEMBL
Match: A0A1S3BY38 (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.4e-98
Identity = 195/223 (87.44%), Postives = 204/223 (91.48%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA+LQILKST+S PSIS PNFG+QS+RFFSD DS    +LLHGRRR+LR   VCRRFSFR
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAA+DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN DF LGGEMTGENRDFSRRS
Sbjct: 61  CAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFF G SF+HD  KTPISPPPYVDPYALLEDERI SQIAP VN
Sbjct: 181 YFFFGSSFIHD-GKTPISPPPYVDPYALLEDERI-SQIAPPVN 217

[Close]
BLAST of Clc10G09390 vs. ExPASy TrEMBL
Match: A0A0A0KY14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94
Identity = 188/223 (84.30%), Postives = 201/223 (90.13%), Query Frame = 0 

Query: 1   MATLQILKSTVSPPSISQPNFGAQSSRFFSDLDSTRRFVLLHGRRRNLRYGYVCRRFSFR 60
           MA LQILKS++S PSIS  NFG+QS+RF SD DS    +LLHGRRR+LRY  V RRF+FR
Sbjct: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60

Query: 61  CAAQDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNGDFRLGGEMTGENRDFSRRS 120
           CAA+D DKE+NGEEPPESLFMKELKKRGITPTSLLEDTN+ DF LGGEMTGENRDFSRRS
Sbjct: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180

Query: 181 YFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           YFFLG SF+HD  +TPISPPPYVDPYALLEDERI SQIAP VN
Sbjct: 181 YFFLGASFIHD-GQTPISPPPYVDPYALLEDERI-SQIAPPVN 217

[Close]
BLAST of Clc10G09390 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 193.0 bits (489), Expect = 2.6e-49
Identity = 103/164 (62.80%), Postives = 127/164 (77.44%), Query Frame = 0 

Query: 62  AAQDADKESNGEEPPESLFMKELKKRGITPTSLLED--TNNGDFRLGGEMTGENRDFSRR 121
           A    D +S GEEPPESLFMKELK+RG+TPTSLL+D   +  + + G E TG +   S+ 
Sbjct: 51  ALNGGDNQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKE-TGNS---SKT 110

Query: 122 SAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFA 181
           +A +   +KSL NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLGFWPLIV+T+  F A
Sbjct: 111 TATTPAFDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSA 170

Query: 182 LYFFLGPSFVHDASKTPISPPPYVDPYALLEDERISSQIAPRVN 224
           LY + G  F+HD S+TP+SPPPY+DPYALLEDERIS  + PR+N
Sbjct: 171 LYLYFGADFIHDGSRTPVSPPPYIDPYALLEDERISG-MDPRLN 209

The following BLAST results are available for this feature:
BLAST of Clc10G09390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022984914.11.4e-10591.48uncharacterized protein LOC111483048 [Cucurbita maxima][more]
KAG6576903.14.1e-10591.03hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038905067.14.1e-10591.48uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida][more]
XP_023552655.17.1e-10591.03uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo][more]
XP_022922737.19.2e-10590.58uncharacterized protein LOC111430640 [Cucurbita moschata][more]
BLAST of Clc10G09390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc10G09390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JBV16.9e-10691.48uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048... [more]
A0A6J1E4574.5e-10590.58uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC1114306... [more]
A0A6J1D5D92.1e-9987.44uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A1S3BY382.4e-9887.44uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=... [more]
A0A0A0KY143.5e-9484.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1[more]
BLAST of Clc10G09390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50020.12.6e-4962.80unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..137
NoneNo IPR availablePANTHERPTHR35699F2J10.10 PROTEINcoord: 24..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc10G09390.1Clc10G09390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane