Clc10G08010 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G08010
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	protein TRANSPARENT TESTA GLABRA 1
Location	ClcChr10: 17764716 .. 17767159 (-)
RNA-Seq Expression	Clc10G08010
Synteny	Clc10G08010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGTTTTGAAATTCAGAAACATGAACCAAATGGGGGAGATGAAAGTGTATTTGGGCCTATTTGTTGGAAGGTATATTATTCTTCCAATTTACCCCTTCCTCTAGTTTTCTATCCTTCACCTTTACGCAGTAGTTCGACAGTTTTTCCCTTTCATTGTTCTGCCATTTTAATCAAAGCAGTCGTTCGGCACTCGGCAGTCACCATCTCGCCGGCGTCCACTGAACCGATCATCAATCTGTCGTTCACCGTCTCTCTCTCTCGCGCCTTTCTCTCAGTCTGTTCCATCGTATATCTCTCGTCCCTGTCAGTCTCATCTCTTGATCTCGACTCTCTGTCACTGCTAACATTCATCATATCGCCGGCGTTCACCCTTGTCTCCCTCTTCCAAATCGGTCTTTCCCTCCGATTACCAGCCCCAGTCTCTCTCTACTCTCTACCCAACCCGACCCAACCCGAACCCTCTCTTGCGTTCGTCTTTCCCTTTCCTTCGCTTTCGGAATCATGGAAAACGCAGCCTCCAGATCCGAATTCTTGGTGACCTACGATTCTCCGCATCCTCTCTACGCCATGGCCATCTCTTCCCCCCACTCACACTCTCTTAATTTCCCCAATCGCATAGCACTTGGCAGCTTCGTCGAAGAGTACACCAACCGAGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTAAAGCCCATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTGATGTTCAATCCCAGTCCCCTCTCTTCTCTCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGAAAGTTGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCATTAACCTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACTTCCAGCATTGACACCACTTGTACTATCTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCATGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTTAGGATTTTCGATATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACGATTCTGATGGACAGCAACAAAGTTGTTATTTTGGATATTCGGTCTCCAAGTGTGCCGGTTGCTGAACTTGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCTCGGAGCTGCAGACATATTTGTTCCGCGGGGGATGACAAGCAGGCGCTCATTTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCCACACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCTAACAAAATGCAGCTTTTGAAAGTTTGAGGACTGAGAACGTTTTCCACTGTACCTCTTGCTGTTGTGTATCTACTGTAATATCCTTACCTTTTTTTTTCTCTCCTGTTCTATAAGCCTGATGTCTTGCTATAAGCTTAGCTTTAGGTTAGTGCTAAGTTGTTATTGCTACTCGTCTAATATAAATGTTGTTGCTTCTTCTTGCTAACAGACAACACATTCAATGTTACTTCGCTTGAATTCTTTAAAGTCAATCGCAAGTAAGCCACTTTTTAATCAAAGTTAAAATTGATACTTAGTTCGATTTGTTTATTTTCTTGGCTTTACATTAGGAAATAGGAACTCTTGTTGTTTTGAGTTGTAATGCAATGTAACCCCTCAACTCCGTTGGAAAACAAGGAAGAATAGCTGTTTGGTCGGAAACATACCTTCACATGTAGCTGATACTTGCTACCAACGTATACACCATTTTGGCTCAAGGGTTCTTGACAATGAGAGAATCTACATCTTCTCTTTCAAGTTAGATCCAATATAATGTTTGATTGTTGATTTGAATTTGGACAAGAACTTTCTGCTATAAGTTGCTGCAGGGTAATTTTACTTCTAGTTTATAATCTCATATTATGAGCTGGAGCTGAAGCCGGATCCATCCCGTATGATTGGATTGGGTAGAGTTGATACAAAACCCAAGTTGAATAATAATGAAGCCAACCAGATTCTGAAGATTCAATTGCAACAAATAAGTTCATTGGCTTGTTCTTTTGTCATAATAGTGCAAAAATTCCTTTATGATATGGGGCTGAAATTCACAACAAAAAGCTGTATGAATGTTAGAGACTGTAAGTTAGGTTGTAATATCGTATAGACTTTGTTGTTACTCATTGTTTTTTACTTTTATCAGAAACTATATTATCTATTCCATAATTTCTTCTATCAATACACAAAATAAATCTCTCCATATCTTTTTTTG

mRNA sequence

TATGTTTTGAAATTCAGAAACATGAACCAAATGGGGGAGATGAAAGTGTATTTGGGCCTATTTGTTGGAAGGTATATTATTCTTCCAATTTACCCCTTCCTCTAGTTTTCTATCCTTCACCTTTACGCAGTAGTTCGACAGTTTTTCCCTTTCATTGTTCTGCCATTTTAATCAAAGCAGTCGTTCGGCACTCGGCAGTCACCATCTCGCCGGCGTCCACTGAACCGATCATCAATCTGTCGTTCACCGTCTCTCTCTCTCGCGCCTTTCTCTCAGTCTGTTCCATCGTATATCTCTCGTCCCTGTCAGTCTCATCTCTTGATCTCGACTCTCTGTCACTGCTAACATTCATCATATCGCCGGCGTTCACCCTTGTCTCCCTCTTCCAAATCGGTCTTTCCCTCCGATTACCAGCCCCAGTCTCTCTCTACTCTCTACCCAACCCGACCCAACCCGAACCCTCTCTTGCGTTCGTCTTTCCCTTTCCTTCGCTTTCGGAATCATGGAAAACGCAGCCTCCAGATCCGAATTCTTGGTGACCTACGATTCTCCGCATCCTCTCTACGCCATGGCCATCTCTTCCCCCCACTCACACTCTCTTAATTTCCCCAATCGCATAGCACTTGGCAGCTTCGTCGAAGAGTACACCAACCGAGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTAAAGCCCATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTGATGTTCAATCCCAGTCCCCTCTCTTCTCTCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGAAAGTTGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCATTAACCTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACTTCCAGCATTGACACCACTTGTACTATCTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCATGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTTAGGATTTTCGATATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACGATTCTGATGGACAGCAACAAAGTTGTTATTTTGGATATTCGGTCTCCAAGTGTGCCGGTTGCTGAACTTGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCTCGGAGCTGCAGACATATTTGTTCCGCGGGGGATGACAAGCAGGCGCTCATTTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCCACACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCTAACAAAATGCAGCTTTTGAAAGTTTGAGGACTGAGAACGTTTTCCACTGTACCTCTTGCTGTTGTGTATCTACTGTAATATCCTTACCTTTTTTTTTCTCTCCTGTTCTATAAGCCTGATGTCTTGCTATAAGCTTAGCTTTAGGTTAGTGCTAAGTTGTTATTGCTACTCGTCTAATATAAATGTTGTTGCTTCTTCTTGCTAACAGACAACACATTCAATGTTACTTCGCTTGAATTCTTTAAAGTCAATCGCAAGTAAGCCACTTTTTAATCAAAGTTAAAATTGATACTTAGTTCGATTTGTTTATTTTCTTGGCTTTACATTAGGAAATAGGAACTCTTGTTGTTTTGAGTTGTAATGCAATGTAACCCCTCAACTCCGTTGGAAAACAAGGAAGAATAGCTGTTTGGTCGGAAACATACCTTCACATGTAGCTGATACTTGCTACCAACGTATACACCATTTTGGCTCAAGGGTTCTTGACAATGAGAGAATCTACATCTTCTCTTTCAAGTTAGATCCAATATAATGTTTGATTGTTGATTTGAATTTGGACAAGAACTTTCTGCTATAAGTTGCTGCAGGGTAATTTTACTTCTAGTTTATAATCTCATATTATGAGCTGGAGCTGAAGCCGGATCCATCCCGTATGATTGGATTGGGTAGAGTTGATACAAAACCCAAGTTGAATAATAATGAAGCCAACCAGATTCTGAAGATTCAATTGCAACAAATAAGTTCATTGGCTTGTTCTTTTGTCATAATAGTGCAAAAATTCCTTTATGATATGGGGCTGAAATTCACAACAAAAAGCTGTATGAATGTTAGAGACTGTAAGTTAGGTTGTAATATCGTATAGACTTTGTTGTTACTCATTGTTTTTTACTTTTATCAGAAACTATATTATCTATTCCATAATTTCTTCTATCAATACACAAAATAAATCTCTCCATATCTTTTTTTG

Coding sequence (CDS)

ATGGAAAACGCAGCCTCCAGATCCGAATTCTTGGTGACCTACGATTCTCCGCATCCTCTCTACGCCATGGCCATCTCTTCCCCCCACTCACACTCTCTTAATTTCCCCAATCGCATAGCACTTGGCAGCTTCGTCGAAGAGTACACCAACCGAGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTAAAGCCCATCCTTCCCTCTCCTTTGAGCACCCCTACCCACCCACCAAGCTGATGTTCAATCCCAGTCCCCTCTCTTCTCTCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGAAAGTTGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCATTAACCTCCTTCGACTGGAATGAAGTTGAGCCCAAGAGAATTGGAACTTCCAGCATTGACACCACTTGTACTATCTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCATGACAAAGAGGTTTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTTAGGATTTTCGATATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACGATTCTGATGGACAGCAACAAAGTTGTTATTTTGGATATTCGGTCTCCAAGTGTGCCGGTTGCTGAACTTGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCTCGGAGCTGCAGACATATTTGTTCCGCGGGGGATGACAAGCAGGCGCTCATTTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCCACACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCTAACAAAATGCAGCTTTTGAAAGTTTGA

Protein sequence

MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDSLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV

Homology

[Close]

BLAST of Clc10G08010 vs. NCBI nr
Match: XP_038906093.1 (protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida])

HSP 1 Score: 675.2 bits (1741), Expect = 2.8e-190
Identity = 329/333 (98.80%), Postives = 331/333 (99.40%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           M+NA SRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSF+EEYTNRVDIVSFDPD
Sbjct: 1   MQNADSRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFIEEYTNRVDIVSFDPD 60

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT
Sbjct: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSATHEINQLQWSAAQPDWIALAFS KMQLLKV
Sbjct: 301 YSATHEINQLQWSAAQPDWIALAFSKKMQLLKV 333

[Close]

BLAST of Clc10G08010 vs. NCBI nr
Match: NP_001267687.1 (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat protein [Cucumis sativus] >KGN53658.1 hypothetical protein Csa_014980 [Cucumis sativus])

HSP 1 Score: 654.4 bits (1687), Expect = 5.1e-184
Identity = 319/333 (95.80%), Postives = 327/333 (98.20%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           ME+AASRSEFL TY+SPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIKA+PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Clc10G08010 vs. NCBI nr
Match: KAA0045351.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 652.5 bits (1682), Expect = 1.9e-183
Identity = 320/333 (96.10%), Postives = 325/333 (97.60%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           MENAASRSEFL TYDSPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK +PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of Clc10G08010 vs. NCBI nr
Match: TYJ96928.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 652.5 bits (1682), Expect = 1.9e-183
Identity = 320/333 (96.10%), Postives = 325/333 (97.60%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           MENAASRSEFL TYDSPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK +PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of Clc10G08010 vs. NCBI nr
Match: XP_008455615.1 (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 652.5 bits (1682), Expect = 1.9e-183
Identity = 320/333 (96.10%), Postives = 325/333 (97.60%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           MENAASRSEFL TYDSPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK +PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWKVGDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Clc10G08010 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.6e-154
Identity = 268/344 (77.91%), Postives = 305/344 (88.66%), Query Frame = 0


Query: 1   MENAA----SRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVS 60
           M+N+A    SRSE  VTYDSP+PLYAMA SS  S S    +RIA+GSF+E+Y NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIKAHPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDYLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD+LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Clc10G08010 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 8.9e-115
Identity = 205/334 (61.38%), Postives = 254/334 (76.05%), Query Frame = 0


Query: 7   RSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDSLSIKA 66
           RSE + TY++P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRRDKKY----RLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDYLRLWKVGD--SSIEPLSLLNNSKTS 126
            P+LSFEHPYPPTK +F P        LLA+S D+LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Clc10G08010 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 3.8e-113
Identity = 201/339 (59.29%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 2   ENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDS 61
           E  + RSE + TY++P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKY----RLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  LSIKAHPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDYLRLWKVGD--SSIEPLSLLN 121
             I++ P+L FEHPYPPTK  F P        LLA+S D+LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 VVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           +V+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of Clc10G08010 vs. ExPASy Swiss-Prot
Match: Q552R1 (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 355.5 bits (911), Expect = 6.4e-97
Identity = 187/329 (56.84%), Postives = 238/329 (72.34%), Query Frame = 0


Query: 11  LVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDSLSIKAHPSL 70
           + TY+SP  +Y ++ SS     +N P R+A+GSF+E+YTNRVD++  + ++   +     
Sbjct: 6   IYTYNSPWVIYGLSWSS----RVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VC 65

Query: 71  SFEHPYPPTKLMFNPSPLSS---LLASSGDYLRLWKVGDS--SIEPLSLLNNSKTSEFCA 130
            FEHPYPPTK M+ P   S+   LLA++GDYLRLW+VG +  SI+  SLL N   SEFCA
Sbjct: 66  GFEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCA 125

Query: 131 PLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFASV 190
           PL+SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FASV
Sbjct: 126 PLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASV 185

Query: 191 SADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 250
            ADGS+R+FD+R+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS KV+ILDIR 
Sbjct: 186 GADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRV 245

Query: 251 PSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAT 310
           PSVP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A 
Sbjct: 246 PSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNAL 305

Query: 311 HEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            EINQL WS++QPDWIA+AFS+ +Q+LKV
Sbjct: 306 AEINQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of Clc10G08010 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.4e-91
Identity = 180/339 (53.10%), Postives = 226/339 (66.67%), Query Frame = 0


Query: 14  YDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDSLSIKAHPSLSFE 73
           Y++P  +YAM  S           R+ALGSFVEEY N+V +V  D +S         +F+
Sbjct: 13  YEAPWTVYAMNWSVRPDKRF----RLALGSFVEEYNNKVQLVGLDEESSEFICRN--TFD 72

Query: 74  HPYPPTKLMFNPSP---LSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKTSEFCAPLTSF 133
           HPYP TKLM+ P        LLA+SGDYLR+W+VG++      LLNN+K S+FCAPLTSF
Sbjct: 73  HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 132

Query: 134 DWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWGEA- 193
           DWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+  A 
Sbjct: 133 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 192

Query: 194 ---RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 253
               +FASV ADGSVR+FD+R  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ MD  
Sbjct: 193 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGM 252

Query: 254 KVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGI 313
           +VVILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P  I
Sbjct: 253 EVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--PRAI 312

Query: 314 -DPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+V
Sbjct: 313 EDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of Clc10G08010 vs. ExPASy TrEMBL
Match: B7SBL6 (WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.5e-184
Identity = 319/333 (95.80%), Postives = 327/333 (98.20%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           ME+AASRSEFL TY+SPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIKA+PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Clc10G08010 vs. ExPASy TrEMBL
Match: A0A5D3BFF9 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00330 PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 9.4e-184
Identity = 320/333 (96.10%), Postives = 325/333 (97.60%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           MENAASRSEFL TYDSPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK +PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of Clc10G08010 vs. ExPASy TrEMBL
Match: A0A5A7TV10 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001300 PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 9.4e-184
Identity = 320/333 (96.10%), Postives = 325/333 (97.60%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           MENAASRSEFL TYDSPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK +PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of Clc10G08010 vs. ExPASy TrEMBL
Match: A0A1S3C1G5 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 9.4e-184
Identity = 320/333 (96.10%), Postives = 325/333 (97.60%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           MENAASRSEFL TYDSPHPLYAMAISSPH+HSLNF +RIALGSFVEEY NRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK +PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWKVGDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Clc10G08010 vs. ExPASy TrEMBL
Match: A0A6J1E766 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 314/339 (92.63%), Postives = 323/339 (95.28%), Query Frame = 0


Query: 1   MENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPD 60
           MENAA RSEF+ TYDSPHPLYAMAISS H+HS  FPNRIALGSF+E+ TNRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDYLRLWKVGDSSIEPLSL 120
           SLSI+ HPSLSF+HPYPPTKLMFNP  LSSL      LASSGDYLRLW+VGDSSIEPLS+
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           IDPMSMYSA HEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of Clc10G08010 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 546.2 bits (1406), Expect = 1.8e-155
Identity = 268/344 (77.91%), Postives = 305/344 (88.66%), Query Frame = 0


Query: 1   MENAA----SRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVS 60
           M+N+A    SRSE  VTYDSP+PLYAMA SS  S S    +RIA+GSF+E+Y NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIKAHPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDYLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD+LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Clc10G08010 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 546.2 bits (1406), Expect = 1.8e-155
Identity = 268/344 (77.91%), Postives = 305/344 (88.66%), Query Frame = 0


Query: 1   MENAA----SRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVS 60
           M+N+A    SRSE  VTYDSP+PLYAMA SS  S S    +RIA+GSF+E+Y NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIKAHPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDYLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD+LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Clc10G08010 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 546.2 bits (1406), Expect = 1.8e-155
Identity = 268/344 (77.91%), Postives = 305/344 (88.66%), Query Frame = 0


Query: 1   MENAA----SRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVS 60
           M+N+A    SRSE  VTYDSP+PLYAMA SS  S S    +RIA+GSF+E+Y NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIKAHPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDYLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD+LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Clc10G08010 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 414.8 bits (1065), Expect = 6.3e-116
Identity = 205/334 (61.38%), Postives = 254/334 (76.05%), Query Frame = 0


Query: 7   RSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDSLSIKA 66
           RSE + TY++P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRRDKKY----RLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDYLRLWKVGD--SSIEPLSLLNNSKTS 126
            P+LSFEHPYPPTK +F P        LLA+S D+LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Clc10G08010 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 409.5 bits (1051), Expect = 2.7e-114
Identity = 201/339 (59.29%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 2   ENAASRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFVEEYTNRVDIVSFDPDS 61
           E  + RSE + TY++P  +YAM  S           R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKY----RLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  LSIKAHPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDYLRLWKVGD--SSIEPLSLLN 121
             I++ P+L FEHPYPPTK  F P        LLA+S D+LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 VVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           +V+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSATHEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

The following BLAST results are available for this feature:

BLAST of Clc10G08010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906093.1	2.8e-190	98.80	protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida]	[more]
NP_001267687.1	5.1e-184	95.80	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat ...	[more]
KAA0045351.1	1.9e-183	96.10	protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa]	[more]
TYJ96928.1	1.9e-183	96.10	protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa]	[more]
XP_008455615.1	1.9e-183	96.10	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]

BLAST of Clc10G08010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGN1	2.6e-154	77.91	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
Q9LPV9	8.9e-115	61.38	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	3.8e-113	59.29	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q552R1	6.4e-97	56.84	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
P61962	1.4e-91	53.10	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of Clc10G08010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B7SBL6	2.5e-184	95.80	WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1	[more]
A0A5D3BFF9	9.4e-184	96.10	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7TV10	9.4e-184	96.10	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3C1G5	9.4e-184	96.10	protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 ...	[more]
A0A6J1E766	1.3e-180	92.63	protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561...	[more]

BLAST of Clc10G08010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24520.1	1.8e-155	77.91	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	1.8e-155	77.91	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	1.8e-155	77.91	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	6.3e-116	61.38	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	2.7e-114	59.29	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 156..194 e-value: 1.4E-4 score: 31.3 coord: 65..103 e-value: 22.0 score: 8.6 coord: 108..153 e-value: 2.0 score: 15.2 coord: 245..285 e-value: 1.2E-5 score: 34.8
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 249..284 e-value: 0.025 score: 15.5 coord: 163..194 e-value: 0.094 score: 13.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 163..203 score: 9.305395
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 252..286 score: 9.739832
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 42..332 e-value: 9.2E-39 score: 135.5
IPR031104	Protein TRANSPARENT TESTA GLABRA 1	PANTHER	PTHR19919:SF10	PROTEIN TRANSPARENT TESTA GLABRA 1	coord: 7..333
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 7..333
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 272..286
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 38..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G08010.1	Clc10G08010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding