Clc10G07698 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G07698
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CCHC-type domain-containing protein
Location	ClcChr10: 14149434 .. 14153300 (-)
RNA-Seq Expression	Clc10G07698
Synteny	Clc10G07698

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATTGATGATTTTGTACATTCCCTTGAAGCACATGAACAGAGAAAGAAGAAAAAGAAACAAGAGGTCTTGGAGGAGGCCTTACAAACAAAGATGACCATTAAAGAAGACAAGGCAATGTCTGTGCAACACAACCGAGGAAGAAGACGTGGTCGTGGTGGTCACAGTTTTGGTCGCGGTAGAGGTCGTGGTCATGGAAATAACAATGAAGAGAAAGCACAAACAAGCCAACAAAATTGGCGTGGAAGAGGCCAAGCTCGTGGAAGAGGTGGTCACTCAAATCATCCAAATGTCGAGCGTTACAATTGTGGAAAATATGGACACTATGCAAAAGATTGGTATTCCAAGAAGAAGGTGGAAGAAAACGCGAACTTAGTCGGGGAAGATGAGACCAAAGATGACGGTGTTCTCATGAAGGCATCACTCTGGACAGCGACATGGTGTGGTATCTTGACACTGGTGCAAACAACCATATGTGTAGGCACAAACATCTTTTTGTTGATATGCAAGAGATAGAAGATGGACATGTGTCTTTTAGAGATGCATCAAAGGTTTAAGTCAAAGGTTGAGGAAAAATACATTTTTCCCAAAAGAACAGAAAAGAAGGTACTATGGAGGATGTCTACTATGTACTTGACTGAAGAGTAAATTCTAAGTATGGGGCAGTTATTGGAGAAAGGATGTTCGGTCTTCATGAAAGATCAAATGTTGCACTTGAAGGACAGAAATGATTGGGTGCTTGCACACGTTGAGATGACAAAGAATCGAATGTTCAAACTCAAATTGAAGAATGTACAAGAGAGGTGTTTACAAGTCAACATGGAGGACAAAGCATTCTTATGGCATTTACGGTTTGGACACTTACACTACAGCCAACTAAAAGAGTTAGCAAAGGACATGGTCCATGGGCTACCAAAAATGGACTACACCAAGAATTTTTGTGAAGGTTGTGTACTTGGCAAGCTAGCAAGGACAACTTTCCAAAAGAAGGCAAAATATTGTTTAAAGAGACCTCTCGAGTTGATACATACAGACATTGTGGTCTAATCACTCTGAAGTCTTTCAGTGAGAAAAGGTATTTTATTTCCTTTATTGATGACTATACAAGAAAGACTTGGGTTTATTTTTTGAAGGAAAAGTCAGAAGCGTTTGAAGTATTAAAAAAGTTCAAGGTAATGGTAGGGAAGACAACCAATCTTTACATCAAGGCCTTATGATCATCAGATAGAGGTGGAGAATACAACCACTTTCACAAATTATTGTGAGAAACAAGGTATCAAAAGATTTTTGACTACACCATATTCACCTCAGCAAAATGGCGTTGCAGAAAGGAAAAATAGAACGATCCTTGATATGGTTCGATCAATGTTGAAGAGTAAAGATGTGCCGAAAGAATTCTAGACGGAAGCAGTACAATGCATTGTGTATGTGCAAAATCAATGTCCACATACAAAATTGGAAAATCCAACACTGCAAGAGGCTTGGAGTGGTCATAAACCAACTGTACCACACCTTAAAGTGTTTGGCAGTGTGGCCTATGCGCAAGTACCAGACCAAAGAAGAATCAAACTCGATGATAAGAGTAAGAAATATGTGTTCATTGGGTATGACGAGAAGATGAAGGCTTACAATTATTCGATCCAATTGAAAAAAAGGTAATTGTAAGTCGTGACATTCAGGTGAATGAAGAAGGTGCATGAGATTGGAAGAATCAAAAGGAGGCATTACAAGGAGAGTCATTGAGAATTGTGCCAATAATCACTCCAATGACTTCTTAAATATTTGACAAAGAGGAAGAGTCGAGTCAACTTAGGATGCGAAGTCTACAAGATCTATACGACTCAACCGATGAAGTACACCTAGTTTGTTAACTAGCAGACTCAGAGAACATTGCTTTTGAAGAAGCCATAAGAAACAAGAAGTGGAAAGCCGCAATGGATGAAGAAATAGAAGCAATCGAAAGAAACAAAACTTCGAATTTGGTGGAATTATCTGATGGATATAGACCCATTGGTGTAAAATGGGTATACAAGAAGAAGATGAATACCCAAGGTGAGCTTGAAAGGTACAAAGTGCGTCTAGTTGCAAAGGGTTACAGACAAAAGGCATGAATCGATTATGACAAAGTTTTTGCTCCATTTGCAAGAATGGAGACAATTCGACTTCTTTTATCTCTAGCTGCACATCTCGAGTGGGCTATCTATCAAATGGATGTAAAATCAGCATTTTTAAATGGAGTTCTTGAAGAAGGACATATGGAGCAACCCTCTGGATATATGAAATCTGGAAAGGAAAGTGAAGTATTGAAACTAAAGAAGGTGCTCTATGGGTTAAAGCAAGCACCTCGAGCATGGAACACTGGAATTGATACTTACTTCAAGAAGAACAAATTCATACAATACCCTTATGAGTATGCATTATACATAAAGAAAGAAGAAGGTAATCTGCTCATCATTGCCCTTTATGTTGATGTTCTTATTTCAATGGGAAGCAATGAGAACTTGGTCATGAACTTTAAAGATGCTATGACACGAGAGTTTGAAATGATAGACTTAGGATTGATGAAATACTTTCTTGATCTCGAGATTAGACAAGAAAACTTTGGAATTTTTGTTTCATAGGAAGCATATACGAAAGCCATTTTGAAAAAAAATAAGATGGAGGAATGCAAGCTTGTAGAAACACCAATGGAGCTTGGCACAAAACTCTCTAAATTTGAGGGAGGAGATCGAGTAAATGCACGTGAATATCGTAGTTTAGTAAGGAGTCTACGATATCTCACATGCACAAGACCGGATATTGCATATAGTGTTGGTGTAGTAAGTCCATACATGGAGGATCCAAGGCACTCCCACCTCAAAGCCGTTAAATAAATTCTTCGATACATTTGAGGGACGAAATCATTCAGGCTTCTCTACACAAGGATGAGTGACTACAAGTTGATAGGATACTCTGATAGTGATTGGTGCGGAGATATGGATGATAGAAAAAGTACTGGAGGATACGTGTTCTACATGGGGAATACAACATTCACATGGCTCTCAAAAAAGCGGCCAATTGTAACTTTGTCAACATGTGAGGCAAAATAGGTGCCAGCATCTTGATGTGTGTGTCACACAATTTGGCTAAGAAACTTACTGTGTGAGCATGAGACAACAAAAACACGAGTCGACAATAAATCAACCATTAAGTTGGCAAAGAATTCGGTCCATAATTAAAGAAGTAAGTACATTGACGGCCGGTTTCATTTTATTAGAGAACATGTAAAGAATGGAGAAGTGAAAATGATTCACGTTTCAAGTCATGACCAGTAGTTGATATTTTTACAAAACTCAAACGATGTCCAAATTAAATGTGTGACCTATGAGTTTTGATGCCCCAGATGTGTACTTTTGAAATTCTGTCTTAATTGTTGTAATCTCTTTAATTTGCTTTTATTAGTGATTTATTGAAGGAATTTAGGGAGGCACTTTATGAGACTATATATAGTGGTATTGTAATCTTTCCCAATATAGGTTGAGAAAGAAATCAATAGAAGATTGAGTATTAGTGTTCATATTTTATTCTTTCTCTCTTCAAGAAAAAGTTTCACCACTCAAATCATTTGTTTTTATCAGAAACTGGCTGGACGATAGCGGTGATTGGCTACAGTGATCTGAGAGTTAGATAGGGAGAGAGAGACCGAGAGAGGGAATAGCTCACCACAGTGAACAGCTGCAGGTGGCGCAGATGACGGGCATTCAACGGCAGGATAGAGCGGCAGTGAACCGCGTCGGCGATCTGGGCGTGAATGGAAGTGAGCTGTGGCTGGGACCAGGCATGAACGAAGGAGAAAATCCAAAGGGGGTTGCGTGCATGCTTTAG

mRNA sequence

ATGACTATTGATGATTTTGTACATTCCCTTGAAGCACATGAACAGAGAAAGAAGAAAAAGAAACAAGAGGTCTTGGAGGAGGCCTTACAAACAAAGATGACCATTAAAGAAGACAAGGCAATGTCTGTGCAACACAACCGAGGAAGAAGACGTGGTCGTGGTGGTCACAGTTTTGGTCGCGGTAGAGGTCGTGGTCATGGAAATAACAATGAAGAGAAAGCACAAACAAGCCAACAAAATTGGCGTGGAAGAGGCCAAGCTCGTGGAAGAGGTGGTCACTCAAATCATCCAAATGTCGAGCGTTACAATTGTGGAAAATATGGACACTATGCAAAAGATTGGTATTCCAAGAAGAAGATAGGGAGAGAGAGACCGAGAGAGGGAATAGCTCACCACAGTGAACAGCTGCAGGTGGCGCAGATGACGGGCATTCAACGGCAGGATAGAGCGGCAGTGAACCGCGTCGGCGATCTGGGCGTGAATGGAAGTGAGCTGTGGCTGGGACCAGGCATGAACGAAGGAGAAAATCCAAAGGGGGTTGCGTGCATGCTTTAG

Coding sequence (CDS)

ATGACTATTGATGATTTTGTACATTCCCTTGAAGCACATGAACAGAGAAAGAAGAAAAAGAAACAAGAGGTCTTGGAGGAGGCCTTACAAACAAAGATGACCATTAAAGAAGACAAGGCAATGTCTGTGCAACACAACCGAGGAAGAAGACGTGGTCGTGGTGGTCACAGTTTTGGTCGCGGTAGAGGTCGTGGTCATGGAAATAACAATGAAGAGAAAGCACAAACAAGCCAACAAAATTGGCGTGGAAGAGGCCAAGCTCGTGGAAGAGGTGGTCACTCAAATCATCCAAATGTCGAGCGTTACAATTGTGGAAAATATGGACACTATGCAAAAGATTGGTATTCCAAGAAGAAGATAGGGAGAGAGAGACCGAGAGAGGGAATAGCTCACCACAGTGAACAGCTGCAGGTGGCGCAGATGACGGGCATTCAACGGCAGGATAGAGCGGCAGTGAACCGCGTCGGCGATCTGGGCGTGAATGGAAGTGAGCTGTGGCTGGGACCAGGCATGAACGAAGGAGAAAATCCAAAGGGGGTTGCGTGCATGCTTTAG

Protein sequence

MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGRGRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKKKIGRERPREGIAHHSEQLQVAQMTGIQRQDRAAVNRVGDLGVNGSELWLGPGMNEGENPKGVACML

Homology

[Close]

BLAST of Clc10G07698 vs. NCBI nr
Match: XP_016681346.1 (uncharacterized protein LOC107900159 [Gossypium hirsutum])

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-24
Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +TID+ + SL+AHEQRKKKKK+E LE+ALQTK +IK++K +  Q  +GR RGRG    GR
Sbjct: 96  LTIDELIDSLKAHEQRKKKKKEETLEQALQTKASIKDEKVLYSQSLQGRGRGRGDRGNGR 155

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G G   N EEK  ++QQNWRGR + RGRGG SN+ NVE Y CGKYGHYAKD  S K
Sbjct: 156 GGKGCGQEGNYEEKEHSNQQNWRGRRRGRGRGGWSNYSNVECYKCGKYGHYAKDCNSDK 214

[Close]

BLAST of Clc10G07698 vs. NCBI nr
Match: KAE8706666.1 (hypothetical protein F3Y22_tig00110388pilonHSYRG00007 [Hibiscus syriacus])

HSP 1 Score: 121.7 bits (304), Expect = 6.6e-24
Identity = 76/140 (54.29%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +TIDD   SLEAHEQRKKK K E LEEALQ K+ IK++K +  Q+ RGR RGRG  S GR
Sbjct: 148 LTIDDLAESLEAHEQRKKKNKNESLEEALQAKVFIKDEKVLYTQNFRGRGRGRGDRSNGR 207

Query: 61  GRG-RGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV-------------------E 120
           G G R  G   EE  Q+ QQNWRGRG+  GRGG SNH NV                   E
Sbjct: 208 GGGCRSKGEYYEENGQSRQQNWRGRGRGLGRGGRSNHSNVECYNFSKHGHYAKECKSNIE 267

[Close]

BLAST of Clc10G07698 vs. NCBI nr
Match: KAE8721174.1 (hypothetical protein F3Y22_tig00016637pilonHSYRG00095 [Hibiscus syriacus])

HSP 1 Score: 121.7 bits (304), Expect = 6.6e-24
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR
Sbjct: 185 LTVNELTGSLEAHEQRKKKKKEETLEQALQTKALIKDEKVFYSQNFRGKGRGRGGRGYGR 244

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+E Y C KYGHYAKD  S K
Sbjct: 245 GGQGDSHEGYYKENGQSSQPNWRGRGRGRGRGGRSNYSNIECYKCYKYGHYAKDCNSDK 303

[Close]

BLAST of Clc10G07698 vs. NCBI nr
Match: KAE8702390.1 (hypothetical protein F3Y22_tig00110483pilonHSYRG00411 [Hibiscus syriacus])

HSP 1 Score: 121.3 bits (303), Expect = 8.6e-24
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR
Sbjct: 185 LTVNELTGSLEAHEQRKKKKKEETLEQALQTKALIKDEKVFYSQNFRGKGRGRGGRGYGR 244

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+E Y C KYGHYAKD  S K
Sbjct: 245 GGQGDSHEGYYKENGQSSQPNWRGRGRERGRGGRSNYSNIECYKCYKYGHYAKDCNSDK 303

[Close]

BLAST of Clc10G07698 vs. NCBI nr
Match: KAE8732752.1 (hypothetical protein F3Y22_tig00001732pilonHSYRG00018 [Hibiscus syriacus])

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-23
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +TI++   SLEAHEQRKKK+K+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR
Sbjct: 185 LTINELTGSLEAHEQRKKKRKEETLEQALQTKALIKDEKVFYSQNFRGKGRGRGGRGYGR 244

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+E Y C KYGHYAKD  S K
Sbjct: 245 GGQGDSHEGYYKENGQSSQPNWRGRGRGRGRGGRSNYSNIECYKCYKYGHYAKDCNSDK 303

[Close]

BLAST of Clc10G07698 vs. ExPASy TrEMBL
Match: A0A1U8ITE2 (uncharacterized protein LOC107900159 OS=Gossypium hirsutum OX=3635 GN=LOC107900159 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.4e-25
Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +TID+ + SL+AHEQRKKKKK+E LE+ALQTK +IK++K +  Q  +GR RGRG    GR
Sbjct: 96  LTIDELIDSLKAHEQRKKKKKEETLEQALQTKASIKDEKVLYSQSLQGRGRGRGDRGNGR 155

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G G   N EEK  ++QQNWRGR + RGRGG SN+ NVE Y CGKYGHYAKD  S K
Sbjct: 156 GGKGCGQEGNYEEKEHSNQQNWRGRRRGRGRGGWSNYSNVECYKCGKYGHYAKDCNSDK 214

[Close]

BLAST of Clc10G07698 vs. ExPASy TrEMBL
Match: A0A6A3BX58 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00016637pilonHSYRG00095 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.2e-24
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR
Sbjct: 185 LTVNELTGSLEAHEQRKKKKKEETLEQALQTKALIKDEKVFYSQNFRGKGRGRGGRGYGR 244

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+E Y C KYGHYAKD  S K
Sbjct: 245 GGQGDSHEGYYKENGQSSQPNWRGRGRGRGRGGRSNYSNIECYKCYKYGHYAKDCNSDK 303

[Close]

BLAST of Clc10G07698 vs. ExPASy TrEMBL
Match: A0A6A3AQY9 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110388pilonHSYRG00007 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.2e-24
Identity = 76/140 (54.29%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +TIDD   SLEAHEQRKKK K E LEEALQ K+ IK++K +  Q+ RGR RGRG  S GR
Sbjct: 148 LTIDDLAESLEAHEQRKKKNKNESLEEALQAKVFIKDEKVLYTQNFRGRGRGRGDRSNGR 207

Query: 61  GRG-RGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNV-------------------E 120
           G G R  G   EE  Q+ QQNWRGRG+  GRGG SNH NV                   E
Sbjct: 208 GGGCRSKGEYYEENGQSRQQNWRGRGRGLGRGGRSNHSNVECYNFSKHGHYAKECKSNIE 267

[Close]

BLAST of Clc10G07698 vs. ExPASy TrEMBL
Match: A0A6A3AD07 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110483pilonHSYRG00411 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-24
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +T+++   SLEAHEQRKKKKK+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR
Sbjct: 185 LTVNELTGSLEAHEQRKKKKKEETLEQALQTKALIKDEKVFYSQNFRGKGRGRGGRGYGR 244

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+E Y C KYGHYAKD  S K
Sbjct: 245 GGQGDSHEGYYKENGQSSQPNWRGRGRERGRGGRSNYSNIECYKCYKYGHYAKDCNSDK 303

[Close]

BLAST of Clc10G07698 vs. ExPASy TrEMBL
Match: A0A6A3CZT6 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001732pilonHSYRG00018 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-24
Identity = 69/119 (57.98%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 1   MTIDDFVHSLEAHEQRKKKKKQEVLEEALQTKMTIKEDKAMSVQHNRGRRRGRGGHSFGR 60
           +TI++   SLEAHEQRKKK+K+E LE+ALQTK  IK++K    Q+ RG+ RGRGG  +GR
Sbjct: 185 LTINELTGSLEAHEQRKKKRKEETLEQALQTKALIKDEKVFYSQNFRGKGRGRGGRGYGR 244

Query: 61  -GRGRGHGNNNEEKAQTSQQNWRGRGQARGRGGHSNHPNVERYNCGKYGHYAKDWYSKK 119
            G+G  H    +E  Q+SQ NWRGRG+ RGRGG SN+ N+E Y C KYGHYAKD  S K
Sbjct: 245 GGQGDSHEGYYKENGQSSQPNWRGRGRGRGRGGRSNYSNIECYKCYKYGHYAKDCNSDK 303

The following BLAST results are available for this feature:

BLAST of Clc10G07698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016681346.1	1.3e-24	60.50	uncharacterized protein LOC107900159 [Gossypium hirsutum]	[more]
KAE8706666.1	6.6e-24	54.29	hypothetical protein F3Y22_tig00110388pilonHSYRG00007 [Hibiscus syriacus]	[more]
KAE8721174.1	6.6e-24	57.98	hypothetical protein F3Y22_tig00016637pilonHSYRG00095 [Hibiscus syriacus]	[more]
KAE8702390.1	8.6e-24	57.98	hypothetical protein F3Y22_tig00110483pilonHSYRG00411 [Hibiscus syriacus]	[more]
KAE8732752.1	1.1e-23	57.98	hypothetical protein F3Y22_tig00001732pilonHSYRG00018 [Hibiscus syriacus]	[more]

BLAST of Clc10G07698 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G07698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8ITE2	6.4e-25	60.50	uncharacterized protein LOC107900159 OS=Gossypium hirsutum OX=3635 GN=LOC1079001...	[more]
A0A6A3BX58	3.2e-24	57.98	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00016637pilon...	[more]
A0A6A3AQY9	3.2e-24	54.29	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A3AD07	4.2e-24	57.98	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110483pilon...	[more]
A0A6A3CZT6	5.4e-24	57.98	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001732pilon...	[more]

BLAST of Clc10G07698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..84
None	No IPR available	PANTHER	PTHR34222:SF44	DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A-LIKE	coord: 1..116
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G07698.1	Clc10G07698.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding