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Clc10G06700 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAAGATAAAGGTAGTGGATCTTAATTAATTTTCAAACACAATCAAATTGAACATCATTTATTATTCAATTAGATTGTAAGATTTGATTACAGATTTTGAGGTGTACCCTACAACTCATTAGATTACAAAATGTAGGTAAACAACAACAATAGTAATCAACTGTGACCCACTTTTTACATTAGGATTGATGGAATACATTTTCTTTAATGTAGAGATGACCTAAATGATTACTTTTAAAAAAGAATCAAAAGTATTTTTTCCTCTAATTAAAAATTTGAAAAATTTAGAAACTAAAATAGAGATTTTTAATAGTCATAAGTCAAAGATGGAATGAACCCACTAATTCAGCAACAAAATAAGATTAACAAAAAAAAAAAAAAAGAAATTAAGTATATTTTTGTTTTAATTAGTAACGTAATAATGATATTCATTTCCAGCCATTTCCAAAGGGAAAATTGAAAGGAAAAAGAGGAAAAAAAAAAAAAAGAAAAGAAAAAAGAAAAAAGAAATTGTAGGAACCGTCCAGTTTAATGTCTCTGATATTTATTTATTTATTTATTTTTGTCGGGTCCTTTGATTTTTATTTTTTATTTTTCATCATCAATCTTCATAAATCTCTAGGCATTTTCCGCCATAATTTCTCCCCAATCCCTAAACTGAAGAACACGAAAAAAAAAAAAAGAAAAAAGAAGGAAAACAAAAATGGCGGATGGCTACTCCAAAATCAAAGCGGCTTGCAAATTGAAATCAAGATCCATCGATTACTCCGATCTCTCCTCACTTCCTCACTCTCTCAGATTCAATGCGGCCGTCTCCAATCCAATCTCTCATGATTCCAGTCAGAACCGAAGGAATCGACCGCGGGAACCACCGCACAGCCGGTTACCGGAGGAAGTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAATACGAATACGGCGGGACCGGGACCGTGGCTAGGCTTAGTCGAAACAGCTCTGTTTCTTCATCGGCTTCCGGATTTCAGTCGGCAGTGAAGAGAGCATTATCGATGAGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCAACGTCGATGGAGGATGATGAAATGGAAGGAGGAAAAACAGGAGGATCTGTGAGGAAGGAGAAGAAGAAGAAGAAGAAGACGGCGACAGGGAAAATGGTTAGAGCATGTAAGCGACTTTTTGGACTGTAGTTTTTTGAATTGATCCGTAAAGCTAAAATTGTTATTGATGAATTGTTGAAGAGAGGAAGATGAGTTTTTTTTTTTTT ATGTCAGAACCGAAGGAATCGACCGCGGGAACCACCGCACAGCCGGTTACCGGAGGAAGTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAATACGAATACGGCGGGACCGGGACCGTGGCTAGGCTTAGTCGAAACAGCTCTGTTTCTTCATCGGCTTCCGGATTTCAGTCGGCAGTGAAGAGAGCATTATCGATGAGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCAACGTCGATGGAGGATGATGAAATGGAAGGAGGAAAAACAGGAGGATCTGTGAGGAAGGAGAAGAAGAAGAAGAAGAAGACGGCGACAGGGAAAATGGTTAGAGCATGTAAGCGACTTTTTGGACTGTAGTTTTTTGAATTGATCCGTAAAGCTAAAATTGTTATTGATGAATTGTTGAAGAGAGGAAGATGAGTTTTTTTTTTTTT ATGTCAGAACCGAAGGAATCGACCGCGGGAACCACCGCACAGCCGGTTACCGGAGGAAGTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAATACGAATACGGCGGGACCGGGACCGTGGCTAGGCTTAGTCGAAACAGCTCTGTTTCTTCATCGGCTTCCGGATTTCAGTCGGCAGTGAAGAGAGCATTATCGATGAGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCAACGTCGATGGAGGATGATGAAATGGAAGGAGGAAAAACAGGAGGATCTGTGAGGAAGGAGAAGAAGAAGAAGAAGAAGACGGCGACAGGGAAAATGGTTAGAGCATGTAAGCGACTTTTTGGACTGTAG MSEPKESTAGTTAQPVTGGSREEEEEEEEEEKEYEYGGTGTVARLSRNSSVSSSASGFQSAVKRALSMRRSSSVAERYCRIHDQFATFATSMEDDEMEGGKTGGSVRKEKKKKKKTATGKMVRACKRLFGL Homology
BLAST of Clc10G06700 vs. NCBI nr
Match: KAG7015455.1 (hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.9 bits (359), Expect = 2.0e-30 Identity = 87/120 (72.50%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Clc10G06700 vs. NCBI nr
Match: XP_022929198.1 (uncharacterized protein LOC111435863 [Cucurbita moschata] >KAG6577366.1 hypothetical protein SDJN03_24940, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29 Identity = 86/120 (71.67%), Postives = 96/120 (80.00%), Query Frame = 0
BLAST of Clc10G06700 vs. NCBI nr
Match: KGN56255.1 (hypothetical protein Csa_011668 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25 Identity = 82/124 (66.13%), Postives = 91/124 (73.39%), Query Frame = 0
BLAST of Clc10G06700 vs. NCBI nr
Match: XP_022136741.1 (uncharacterized protein LOC111008371 [Momordica charantia]) HSP 1 Score: 121.7 bits (304), Expect = 4.7e-24 Identity = 76/110 (69.09%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Clc10G06700 vs. NCBI nr
Match: KAG7031359.1 (hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 116.3 bits (290), Expect = 2.0e-22 Identity = 72/110 (65.45%), Postives = 81/110 (73.64%), Query Frame = 0
BLAST of Clc10G06700 vs. ExPASy TrEMBL
Match: A0A6J1ERE9 (uncharacterized protein LOC111435863 OS=Cucurbita moschata OX=3662 GN=LOC111435863 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 8.1e-30 Identity = 86/120 (71.67%), Postives = 96/120 (80.00%), Query Frame = 0
BLAST of Clc10G06700 vs. ExPASy TrEMBL
Match: A0A0A0L2N9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110030 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.4e-26 Identity = 82/124 (66.13%), Postives = 91/124 (73.39%), Query Frame = 0
BLAST of Clc10G06700 vs. ExPASy TrEMBL
Match: A0A6J1C4C9 (uncharacterized protein LOC111008371 OS=Momordica charantia OX=3673 GN=LOC111008371 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 2.3e-24 Identity = 76/110 (69.09%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Clc10G06700 vs. ExPASy TrEMBL
Match: A0A5A7V402 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00790 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21 Identity = 75/111 (67.57%), Postives = 84/111 (75.68%), Query Frame = 0
BLAST of Clc10G06700 vs. ExPASy TrEMBL
Match: A0A5N6QLE4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004482 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 4.7e-14 Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Clc10G06700 vs. TAIR 10
Match: AT4G24275.1 (Identified as a screen for stress-responsive genes. ) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08 Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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