Clc10G06480 (gene) Watermelon (cordophanus) v2

Overview
NameClc10G06480
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionfibroin heavy chain-like
LocationClcChr10: 8800551 .. 8801809 (-)
RNA-Seq ExpressionClc10G06480
SyntenyClc10G06480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCATCAAATTTCCACCTAAAATCCATGGCTTCTCTCAAATATTTCCTTCTCTGTCCCTTTGTTTTCCTCTGCGGAAGCTACACCTTTGCCAATGGAGTCTTCAACTCCAATGATGGATCTCATTCCGGTCCTAGGGCTTGGCCATTACCCGACCCAAGTGCTGGTCCAGGAGTCGATAGAGGGGTAAAGAATGTTGGGGTTGGCCCAAGAGCCGGACCGACAGCTGGTCCAAGAGTCAAGGGAGGAGTAACTAATGTCATTGCCGGTCCGAGAGCCGAACCAAAAGCTGACCTGGAAGTCGAGGGAGGGGTAACTAATGTCAATGCTGGCCCAAGAGCCGGACCGAGAGCTAGCCTAGGAGTCGAGGGAGGGGCAAGTAATGTCAATGCTGGTCCGAGAGCAGGACCTAAAGCTAGCCTGGGAGTCGAGGGAGGGATAAACAATATCGGTGCTAGTCCGAGAGTTGGACCAAAAGCTGGCCTAGGAGTTGAGGGAGGGGTAAGCAATATTGGTGCTAGTTCGAGAGGTGGACCGAAAGCTGGCCCGGGAGCCGAGGAAGGCGTAAGCAATGTCGGTGCTGGTCCAAGAGCCGGACCCAAATCTGGCTCAGAACCTAAGGTAGGGGTAAGTGGTATTAGAGCTGGTCCAAGAGCGAGGCCAAAAGGTGTTAATTCAATTGTTAACGGAGTCGGAGTCGGAGTCGGAGTCGGAGTTGGGTACAAGCCAGGATTTGGACCTCCAGGATTTTTGCCTCCTGGATTTGGGTCAAGGCCAGGGTATTGGCCTAGGCCAGGATTTGAACCGTACGATGATTGCATATTGGGCTATGTTTGTCCAGCAAATGAAGCTAGGGAATGCAGCAAATTTGAGTATGGAACTTGCCATTCTTATAACTTTCATCCATTGACGGCTTCTACGGACCTACACGAAGTTGACATCAATTGGGCCAGAAGCAAGCCTTTTGCAACGGCCCAAAATGGTGGATCTGGACCAGTTATTCAAATCGACTCAGCCCACTAAGAAGGCCCAAAAAGGTGTCTAATTAAATGTTTTCATGGCCATCTCCTTGCTATCATGCAATATTAAATAATCTTTCACCTCTTAAATAAAAAAGAAGCTTTAGAAAAACATAAAATAAAGTTGCAATATTTAGTACAATCCTATTTCATATTTTGTCTAGTCCACTACTCTATTCGCTTCTATCATTTATCTACCACGCTTTTTCAATAAACATTTCACATCTAGGAGTAGATCCA

mRNA sequence

AAAGCATCAAATTTCCACCTAAAATCCATGGCTTCTCTCAAATATTTCCTTCTCTGTCCCTTTGTTTTCCTCTGCGGAAGCTACACCTTTGCCAATGGAGTCTTCAACTCCAATGATGGATCTCATTCCGGTCCTAGGGCTTGGCCATTACCCGACCCAAGTGCTGGTCCAGGAGTCGATAGAGGGGTAAAGAATGTTGGGGTTGGCCCAAGAGCCGGACCGACAGCTGGTCCAAGAGTCAAGGGAGGAGTAACTAATGTCATTGCCGGTCCGAGAGCCGAACCAAAAGCTGACCTGGAAGTCGAGGGAGGGGTAACTAATGTCAATGCTGGCCCAAGAGCCGGACCGAGAGCTAGCCTAGGAGTCGAGGGAGGGGCAAGTAATGTCAATGCTGGTCCGAGAGCAGGACCTAAAGCTAGCCTGGGAGTCGAGGGAGGGATAAACAATATCGGTGCTAGTCCGAGAGTTGGACCAAAAGCTGGCCTAGGAGTTGAGGGAGGGGTAAGCAATATTGGTGCTAGTTCGAGAGGTGGACCGAAAGCTGGCCCGGGAGCCGAGGAAGGCGTAAGCAATGTCGGTGCTGGTCCAAGAGCCGGACCCAAATCTGGCTCAGAACCTAAGGTAGGGGTAAGTGGTATTAGAGCTGGTCCAAGAGCGAGGCCAAAAGGTGTTAATTCAATTGTTAACGGAGTCGGAGTCGGAGTCGGAGTCGGAGTTGGGTACAAGCCAGGATTTGGACCTCCAGGATTTTTGCCTCCTGGATTTGGGTCAAGGCCAGGGTATTGGCCTAGGCCAGGATTTGAACCGTACGATGATTGCATATTGGGCTATGTTTGTCCAGCAAATGAAGCTAGGGAATGCAGCAAATTTGAGTATGGAACTTGCCATTCTTATAACTTTCATCCATTGACGGCTTCTACGGACCTACACGAAGTTGACATCAATTGGGCCAGAAGCAAGCCTTTTGCAACGGCCCAAAATGGTGGATCTGGACCAGTTATTCAAATCGACTCAGCCCACTAAGAAGGCCCAAAAAGGTGTCTAATTAAATGTTTTCATGGCCATCTCCTTGCTATCATGCAATATTAAATAATCTTTCACCTCTTAAATAAAAAAGAAGCTTTAGAAAAACATAAAATAAAGTTGCAATATTTAGTACAATCCTATTTCATATTTTGTCTAGTCCACTACTCTATTCGCTTCTATCATTTATCTACCACGCTTTTTCAATAAACATTTCACATCTAGGAGTAGATCCA

Coding sequence (CDS)

ATGGCTTCTCTCAAATATTTCCTTCTCTGTCCCTTTGTTTTCCTCTGCGGAAGCTACACCTTTGCCAATGGAGTCTTCAACTCCAATGATGGATCTCATTCCGGTCCTAGGGCTTGGCCATTACCCGACCCAAGTGCTGGTCCAGGAGTCGATAGAGGGGTAAAGAATGTTGGGGTTGGCCCAAGAGCCGGACCGACAGCTGGTCCAAGAGTCAAGGGAGGAGTAACTAATGTCATTGCCGGTCCGAGAGCCGAACCAAAAGCTGACCTGGAAGTCGAGGGAGGGGTAACTAATGTCAATGCTGGCCCAAGAGCCGGACCGAGAGCTAGCCTAGGAGTCGAGGGAGGGGCAAGTAATGTCAATGCTGGTCCGAGAGCAGGACCTAAAGCTAGCCTGGGAGTCGAGGGAGGGATAAACAATATCGGTGCTAGTCCGAGAGTTGGACCAAAAGCTGGCCTAGGAGTTGAGGGAGGGGTAAGCAATATTGGTGCTAGTTCGAGAGGTGGACCGAAAGCTGGCCCGGGAGCCGAGGAAGGCGTAAGCAATGTCGGTGCTGGTCCAAGAGCCGGACCCAAATCTGGCTCAGAACCTAAGGTAGGGGTAAGTGGTATTAGAGCTGGTCCAAGAGCGAGGCCAAAAGGTGTTAATTCAATTGTTAACGGAGTCGGAGTCGGAGTCGGAGTCGGAGTTGGGTACAAGCCAGGATTTGGACCTCCAGGATTTTTGCCTCCTGGATTTGGGTCAAGGCCAGGGTATTGGCCTAGGCCAGGATTTGAACCGTACGATGATTGCATATTGGGCTATGTTTGTCCAGCAAATGAAGCTAGGGAATGCAGCAAATTTGAGTATGGAACTTGCCATTCTTATAACTTTCATCCATTGACGGCTTCTACGGACCTACACGAAGTTGACATCAATTGGGCCAGAAGCAAGCCTTTTGCAACGGCCCAAAATGGTGGATCTGGACCAGTTATTCAAATCGACTCAGCCCACTAA

Protein sequence

MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVGPRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNVNAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGVSNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGFGPPGFLPPGFGSRPGYWPRPGFEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLTASTDLHEVDINWARSKPFATAQNGGSGPVIQIDSAH
Homology
BLAST of Clc10G06480 vs. NCBI nr
Match: KAG6577377.1 (hypothetical protein SDJN03_24951, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 3.9e-59
Identity = 160/329 (48.63%), Postives = 193/329 (58.66%), Query Frame = 0

Query: 1   MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVG 60
           M SLKYFLL PFVFLC S TFAN V NS+DGS                G D     VG G
Sbjct: 1   MGSLKYFLLSPFVFLCLSCTFANRVPNSDDGS----------------GFD-----VGAG 60

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P A PTAGP V+ GV+NV AGP A        EG V +V AG +AGP+A  G EG  S+V
Sbjct: 61  PGAIPTAGPGVEKGVSNVRAGPAA--------EGWVNDVRAGLKAGPKAGPGAEGWVSDV 120

Query: 121 ----NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGA 180
                AGP+AGPKA  G E  ++++ A PR GPKAG G EG VS++ A  R GPKAGPGA
Sbjct: 121 KAGLRAGPKAGPKAGPGAEEWVSDVKAGPRAGPKAGPGAEGWVSDVKAGLRAGPKAGPGA 180

Query: 181 EEGVSNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGF 240
           E  VSNV AGP  GP++    + GVS    G R   + V+ ++NG+G+G+GV +GY+ GF
Sbjct: 181 EGWVSNVKAGPTVGPRAWPGTEGGVSSSEGGVR---RDVDPMINGLGLGLGVDIGYRSGF 240

Query: 241 -----GPPGFLPPGFGSRPGYWPRPGFEPYDDCILGYVCPANEARECSKFEYGTCHSYNF 300
                G   +  PG G   G          ++C LGYVCP    R C KF YG C +Y F
Sbjct: 241 RAGLGGGEHWFGPGIGIGGG-------GVSNECTLGYVCPTYGRRGCDKFSYGNCDTYGF 290

Query: 301 HPLTASTDLHEVDINWAR-SKPFATAQNG 320
           HPL AS  LHEV++ WA+ SKP AT QNG
Sbjct: 301 HPLMASMHLHEVEMKWAKGSKPAATPQNG 290

BLAST of Clc10G06480 vs. NCBI nr
Match: KGN56231.1 (hypothetical protein Csa_011503 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 4.3e-58
Identity = 155/336 (46.13%), Postives = 177/336 (52.68%), Query Frame = 0

Query: 1   MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVG 60
           MASLKYFLL PF+FLC SYTFANGVFN +DG   G  + P PDPSAGP VDRGV N G+G
Sbjct: 1   MASLKYFLLSPFLFLCLSYTFANGVFNYDDGLGFGSMSSPTPDPSAGP-VDRGVSNFGIG 60

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P+A                                                         
Sbjct: 61  PKA--------------------------------------------------------- 120

Query: 121 NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGV 180
                                      GP+AGLGV GG+SN+   S  GPKAGPG +E +
Sbjct: 121 ---------------------------GPRAGLGV-GGISNVDDGSDPGPKAGPGVKEEM 180

Query: 181 SNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGFGPPG 240
           SNVGAGPR        PK+GVS I AGPRA PKGV+ IV G+GVGVGV +       PP 
Sbjct: 181 SNVGAGPRV-------PKLGVSSIEAGPRAGPKGVDPIVTGLGVGVGVNL-------PPI 236

Query: 241 FLPPGFGSR--PGYWPRPG---FEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLT 300
           F  P  G R  PG W  PG    EPY++C+LGYVCP N    C K  YG C SYNF PL+
Sbjct: 241 FGGPKMGIRPGPGGWYGPGPIIQEPYNNCMLGYVCPTNRPWACGKVGYGLCESYNFRPLS 236

Query: 301 ASTDLHEVDINWARSKPFATAQNGGSGPVIQIDSAH 332
           AST+LH+V INWA+SK   TAQ+G SGP I IDSAH
Sbjct: 301 ASTELHDVKINWAKSKSVETAQHGESGPGIHIDSAH 236

BLAST of Clc10G06480 vs. NCBI nr
Match: KAA0060661.1 (hypothetical protein E6C27_scaffold22G005540 [Cucumis melo var. makuwa] >TYK02214.1 hypothetical protein E5676_scaffold18G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 221.9 bits (564), Expect = 8.4e-54
Identity = 147/335 (43.88%), Postives = 167/335 (49.85%), Query Frame = 0

Query: 1   MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVG 60
           MASLKYFLL PF+FLC SYTFA+GVFN + G   G  + P PDPSAGPGVD GV N+G+G
Sbjct: 1   MASLKYFLLSPFLFLCLSYTFADGVFNYDHGLDFGSMSSPTPDPSAGPGVDIGVSNIGIG 60

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P+AGP AG                                                    
Sbjct: 61  PKAGPRAG---------------------------------------------------- 120

Query: 121 NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGV 180
                      LG+ GGI+++   P                                   
Sbjct: 121 -----------LGIGGGISDVDDEP----------------------------------- 180

Query: 181 SNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGFGPPG 240
                GP+AGPK+    K+GVSGI AGPRA PKGVN      G GVGVGV   P FG P 
Sbjct: 181 -----GPKAGPKASGGHKLGVSGIEAGPRAGPKGVN------GFGVGVGVDLPPVFGGPK 221

Query: 241 F-LPPGFGSRPGYWPRPG---FEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLTA 300
             L PG    PG W RPG    EPY +C+LGYVCP N    CSKF YG C SYNFHPL+A
Sbjct: 241 IGLKPG----PGGWYRPGPIIQEPYGNCMLGYVCP-NRPWACSKFAYGLCDSYNFHPLSA 221

Query: 301 STDLHEVDINWARSKPFATAQNGGSGPVIQIDSAH 332
           STDLHEV INWA+SKP ATAQ+G SGP   +DSAH
Sbjct: 301 STDLHEVKINWAKSKPDATAQHGESGPATHVDSAH 221

BLAST of Clc10G06480 vs. NCBI nr
Match: XP_023551823.1 (fibroin heavy chain-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-49
Identity = 130/265 (49.06%), Postives = 161/265 (60.75%), Query Frame = 0

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P A PTAGP V+ GV+NV AGP A        EG V +V AG +AGP+A  G EG  S+V
Sbjct: 9   PGAVPTAGPGVEKGVSNVRAGPAA--------EGWVNDVWAGTKAGPKAGPGAEGWVSDV 68

Query: 121 NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGV 180
            AGPRAG KA  G E  ++++ A PR GPKAG G EG VS++ A  R GPKAGPGAE  V
Sbjct: 69  KAGPRAGLKAGPGAEEWVSDVKAGPRAGPKAGPGAEGWVSDVKAGPRAGPKAGPGAEGWV 128

Query: 181 SNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGF---- 240
           +NV AGP  GP++    + GVS    G R   + V+ ++NG+G+G+GV +GY+ GF    
Sbjct: 129 NNVKAGPTVGPRAWPGTEGGVSSSEGGVR---RDVDPMINGLGLGLGVDIGYRSGFRAGV 188

Query: 241 -GPPGFLPPGFGSRPGYWPRPGFEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLT 300
            G   +  PG G R            ++C LGYVCP    R C KF YG C SY FHPL 
Sbjct: 189 GGGEHWFGPGIGGR---------GVSNECTLGYVCPTYGRRGCDKFSYGNCDSYGFHPLM 248

Query: 301 ASTDLHEVDINWAR-SKPFATAQNG 320
           AS  LHEV++ WA+ SKP AT QNG
Sbjct: 249 ASMQLHEVEMKWAKGSKPAATPQNG 253

BLAST of Clc10G06480 vs. NCBI nr
Match: XP_022929340.1 (fibroin heavy chain-like [Cucurbita moschata])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-45
Identity = 140/325 (43.08%), Postives = 168/325 (51.69%), Query Frame = 0

Query: 1   MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVG 60
           M SLKYFLL PFVFLC S TFAN V NS+DGS                G D     VG G
Sbjct: 1   MGSLKYFLLSPFVFLCLSCTFANRVPNSDDGS----------------GFD-----VGAG 60

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P A PTAGP V+ GV+NV AGP A        EG V +V AG +AGP+A  G EG  S+V
Sbjct: 61  PGAIPTAGPGVEKGVSNVRAGPAA--------EGWVNDVWAGLKAGPKAGPGAEGWVSDV 120

Query: 121 NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGV 180
            AG RAGPKA  G EG ++N+ A P VGP+A  G EGGVS    SS GG +         
Sbjct: 121 KAGLRAGPKAGPGAEGWVSNVKAGPTVGPRAWPGTEGGVS----SSEGGVR--------- 180

Query: 181 SNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGF---- 240
                                           + V+ ++NG+G+G+GV +GY+ GF    
Sbjct: 181 --------------------------------RDVDPMINGLGLGLGVDIGYRSGFRAGL 240

Query: 241 -GPPGFLPPGFGSRPGYWPRPGFEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLT 300
            G   +  PG G   G          ++C LGYVCP    R C KF YG C +Y FHPL 
Sbjct: 241 GGGEHWFGPGIGIGGG-------GVSNECTLGYVCPTYGRRGCDKFSYGNCDTYGFHPLM 244

Query: 301 ASTDLHEVDINWAR-SKPFATAQNG 320
           AS  LHEV++ WA+ SKP AT QNG
Sbjct: 301 ASMHLHEVEMKWAKGSKPAATPQNG 244

BLAST of Clc10G06480 vs. ExPASy TrEMBL
Match: A0A0A0L7X7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104850 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-58
Identity = 155/336 (46.13%), Postives = 177/336 (52.68%), Query Frame = 0

Query: 1   MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVG 60
           MASLKYFLL PF+FLC SYTFANGVFN +DG   G  + P PDPSAGP VDRGV N G+G
Sbjct: 1   MASLKYFLLSPFLFLCLSYTFANGVFNYDDGLGFGSMSSPTPDPSAGP-VDRGVSNFGIG 60

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P+A                                                         
Sbjct: 61  PKA--------------------------------------------------------- 120

Query: 121 NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGV 180
                                      GP+AGLGV GG+SN+   S  GPKAGPG +E +
Sbjct: 121 ---------------------------GPRAGLGV-GGISNVDDGSDPGPKAGPGVKEEM 180

Query: 181 SNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGFGPPG 240
           SNVGAGPR        PK+GVS I AGPRA PKGV+ IV G+GVGVGV +       PP 
Sbjct: 181 SNVGAGPRV-------PKLGVSSIEAGPRAGPKGVDPIVTGLGVGVGVNL-------PPI 236

Query: 241 FLPPGFGSR--PGYWPRPG---FEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLT 300
           F  P  G R  PG W  PG    EPY++C+LGYVCP N    C K  YG C SYNF PL+
Sbjct: 241 FGGPKMGIRPGPGGWYGPGPIIQEPYNNCMLGYVCPTNRPWACGKVGYGLCESYNFRPLS 236

Query: 301 ASTDLHEVDINWARSKPFATAQNGGSGPVIQIDSAH 332
           AST+LH+V INWA+SK   TAQ+G SGP I IDSAH
Sbjct: 301 ASTELHDVKINWAKSKSVETAQHGESGPGIHIDSAH 236

BLAST of Clc10G06480 vs. ExPASy TrEMBL
Match: A0A5A7V4J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00010 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-54
Identity = 147/335 (43.88%), Postives = 167/335 (49.85%), Query Frame = 0

Query: 1   MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVG 60
           MASLKYFLL PF+FLC SYTFA+GVFN + G   G  + P PDPSAGPGVD GV N+G+G
Sbjct: 1   MASLKYFLLSPFLFLCLSYTFADGVFNYDHGLDFGSMSSPTPDPSAGPGVDIGVSNIGIG 60

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P+AGP AG                                                    
Sbjct: 61  PKAGPRAG---------------------------------------------------- 120

Query: 121 NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGV 180
                      LG+ GGI+++   P                                   
Sbjct: 121 -----------LGIGGGISDVDDEP----------------------------------- 180

Query: 181 SNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGFGPPG 240
                GP+AGPK+    K+GVSGI AGPRA PKGVN      G GVGVGV   P FG P 
Sbjct: 181 -----GPKAGPKASGGHKLGVSGIEAGPRAGPKGVN------GFGVGVGVDLPPVFGGPK 221

Query: 241 F-LPPGFGSRPGYWPRPG---FEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLTA 300
             L PG    PG W RPG    EPY +C+LGYVCP N    CSKF YG C SYNFHPL+A
Sbjct: 241 IGLKPG----PGGWYRPGPIIQEPYGNCMLGYVCP-NRPWACSKFAYGLCDSYNFHPLSA 221

Query: 301 STDLHEVDINWARSKPFATAQNGGSGPVIQIDSAH 332
           STDLHEV INWA+SKP ATAQ+G SGP   +DSAH
Sbjct: 301 STDLHEVKINWAKSKPDATAQHGESGPATHVDSAH 221

BLAST of Clc10G06480 vs. ExPASy TrEMBL
Match: A0A6J1EU53 (fibroin heavy chain-like OS=Cucurbita moschata OX=3662 GN=LOC111435943 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.3e-46
Identity = 140/325 (43.08%), Postives = 168/325 (51.69%), Query Frame = 0

Query: 1   MASLKYFLLCPFVFLCGSYTFANGVFNSNDGSHSGPRAWPLPDPSAGPGVDRGVKNVGVG 60
           M SLKYFLL PFVFLC S TFAN V NS+DGS                G D     VG G
Sbjct: 1   MGSLKYFLLSPFVFLCLSCTFANRVPNSDDGS----------------GFD-----VGAG 60

Query: 61  PRAGPTAGPRVKGGVTNVIAGPRAEPKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNV 120
           P A PTAGP V+ GV+NV AGP A        EG V +V AG +AGP+A  G EG  S+V
Sbjct: 61  PGAIPTAGPGVEKGVSNVRAGPAA--------EGWVNDVWAGLKAGPKAGPGAEGWVSDV 120

Query: 121 NAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGV 180
            AG RAGPKA  G EG ++N+ A P VGP+A  G EGGVS    SS GG +         
Sbjct: 121 KAGLRAGPKAGPGAEGWVSNVKAGPTVGPRAWPGTEGGVS----SSEGGVR--------- 180

Query: 181 SNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNGVGVGVGVGVGYKPGF---- 240
                                           + V+ ++NG+G+G+GV +GY+ GF    
Sbjct: 181 --------------------------------RDVDPMINGLGLGLGVDIGYRSGFRAGL 240

Query: 241 -GPPGFLPPGFGSRPGYWPRPGFEPYDDCILGYVCPANEARECSKFEYGTCHSYNFHPLT 300
            G   +  PG G   G          ++C LGYVCP    R C KF YG C +Y FHPL 
Sbjct: 241 GGGEHWFGPGIGIGGG-------GVSNECTLGYVCPTYGRRGCDKFSYGNCDTYGFHPLM 244

Query: 301 ASTDLHEVDINWAR-SKPFATAQNG 320
           AS  LHEV++ WA+ SKP AT QNG
Sbjct: 301 ASMHLHEVEMKWAKGSKPAATPQNG 244

BLAST of Clc10G06480 vs. ExPASy TrEMBL
Match: A0A7R9G286 (Hypothetical protein OS=Timema shepardi OX=629360 GN=TSIB3V08_LOCUS8372 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-11
Identity = 93/237 (39.24%), Postives = 99/237 (41.77%), Query Frame = 0

Query: 31  GSHSGPRAWPL--PDPSAGPGVDRGVKNVGVGPRAGPTAGPRVKGGV---TNVIAGPRAE 90
           G   GP   P+    P  GPG   G    G G   GP  GP V GG      V  GP   
Sbjct: 533 GVGGGPGYGPVVGGGPGYGPGGAGGGPGYGPGVGGGPGYGPGVGGGPGYGPGVGGGPGYG 592

Query: 91  PKADLEVEGGVTNVNAGPRAGPRASLGVEGGASNVNAGPRAGPKASLGVEGGINNIGASP 150
           P     V G  + V  GP  GP    GV GG S  + G   GP    G  GG    G   
Sbjct: 593 PGGVGSVPGYGSGVGGGPGYGPG---GVGGGPSYGSGGVGGGPGYGPGARGG-PGYGPGV 652

Query: 151 RVGPKAGLGVEGGVSNIGASSRGGPKAGPGAEEGVSNVGAGPRAGPKSGSEPKVGVSGIR 210
             GP  G GV GG       + GGP  GPG       VG GP  GP  G  P  G  G+ 
Sbjct: 653 GGGPGYGPGVGGGPGYGPGGAGGGPGYGPG-------VGVGPGYGPGVGGGPGYG-PGVG 712

Query: 211 AGPRARPKGVNSIVNGVGVGVGVGVGYKPG--FGPPGFLPPGFGSRPGYWPRPGFEP 261
            GP   P GV S V G G GVG G GY PG   G PG+ P G G  PGY P  G  P
Sbjct: 713 GGPGYGPGGVGS-VPGYGSGVGGGPGYGPGGVGGGPGYGPGGVGGGPGYGPGVGGGP 756

BLAST of Clc10G06480 vs. ExPASy TrEMBL
Match: A0A0M9A612 (Uncharacterized protein OS=Melipona quadrifasciata OX=166423 GN=WN51_05843 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.8e-08
Identity = 76/212 (35.85%), Postives = 86/212 (40.57%), Query Frame = 0

Query: 49  GVDRGVKNVGVGP------RAGPTAGP-RVKGGVTNVIAGPRAEPKADLEVEGGVTNVNA 108
           GV+ G   VG G         G  AG   V+ G   V AG        +EV  G   V A
Sbjct: 464 GVEAGSLGVGAGSVGVDAGSVGVDAGSLGVEAGSLGVGAGSVEVGAGSVEVGAGSLGVGA 523

Query: 109 GPRAGPRASLGVEGGASNVNAGPRAGPKASLGVEGGINNIGASPRVGPKAGLGVEGGVSN 168
           G   G   SLGVE G+  V AG   G   SLGVE G   +GA    G    LGVE G   
Sbjct: 524 GSAGGDAGSLGVEAGSLGVGAGSAGGDAGSLGVEAGSLGVGAGSAGGDAGSLGVEAGSLG 583

Query: 169 IGASSRGGPKAGPGAEEGVSNVGAGPRAGPKSGSEPKVGVSGIRAGPRARPKGVNSIVNG 228
           +GA S GG     G E G   VGAG   G       + G  G+ AG      G   +  G
Sbjct: 584 VGAGSAGGDAGSLGVEAGSLGVGAGSAGGDAGSLGVEAGSLGVGAGSAGGDAGSLGVEAG 643

Query: 229 -VGVGVGVGVGYKPGFG-PPGFLPPGFGSRPG 252
            +GVG G   G     G   G L  G GS  G
Sbjct: 644 SLGVGAGSAGGDAGSLGVEAGSLGVGAGSAGG 675

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6577377.13.9e-5948.63hypothetical protein SDJN03_24951, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN56231.14.3e-5846.13hypothetical protein Csa_011503 [Cucumis sativus][more]
KAA0060661.18.4e-5443.88hypothetical protein E6C27_scaffold22G005540 [Cucumis melo var. makuwa] >TYK0221... [more]
XP_023551823.11.3e-4949.06fibroin heavy chain-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022929340.11.1e-4543.08fibroin heavy chain-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L7X72.1e-5846.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104850 PE=4 SV=1[more]
A0A5A7V4J64.1e-5443.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1EU535.3e-4643.08fibroin heavy chain-like OS=Cucurbita moschata OX=3662 GN=LOC111435943 PE=4 SV=1[more]
A0A7R9G2862.5e-1139.24Hypothetical protein OS=Timema shepardi OX=629360 GN=TSIB3V08_LOCUS8372 PE=4 SV=... [more]
A0A0M9A6129.8e-0835.85Uncharacterized protein OS=Melipona quadrifasciata OX=166423 GN=WN51_05843 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc10G06480.1Clc10G06480.1mRNA