Clc10G05470 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGCCTCTCTTCTCAATTCCAACCAAGATTTTCCTCTCCTCTTAAACCTTAAAAAACAAAAAACTATTTCCATTCCCTTTCTCCTCTCTCTCTCTGGGTCCCATCGCCCCTCATAAGAGAGAAGAAAAACAAGAGAACACGAAACAACCATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAGTTGAGTGAAAACAAAATGTACTTAAATCAATCGCAAAAACGAGCCATTGTCGACCCATCGTTTGTGAAACGACATGTGGCCAAGACGAAGTCGGAATCGTCAAAAAGTTCGACGAAGAAGTCGTGGTGGAAGAAACCAGAAATGAAGAGACGACGGCGCGTTGCAAAGTACAAGTTGTATGCAGTTGAAGGGAAGGTAAAGAGTTCCATAAAAAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGAAACAACTTTAATCGTATATATATTGTAAAATAAAACTATTATTTAAAACAAACAAACAAACAAACATACTTCTTCAATTTCTTTCATGGCTTTCGTTCTTCTTCTTTGTTCTTTCCATGCATTTGCTTTTAGAATAACGTAGGATGGTTGATAATGAAGATCAATTTGCTTTGCCTTACGTTGTTTAAATGCATAACGTTGTTTTTTATTCTCTGTTTGGATATTGAAAAAAAAATATAATGAAAAAACGATTATTGTGT ACGCCTCTCTTCTCAATTCCAACCAAGATTTTCCTCTCCTCTTAAACCTTAAAAAACAAAAAACTATTTCCATTCCCTTTCTCCTCTCTCTCTCTGGGTCCCATCGCCCCTCATAAGAGAGAAGAAAAACAAGAGAACACGAAACAACCATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAGTTGAGTGAAAACAAAATGTACTTAAATCAATCGCAAAAACGAGCCATTGTCGACCCATCGTTTGTGAAACGACATGTGGCCAAGACGAAGTCGGAATCGTCAAAAAGTTCGACGAAGAAGTCGTGGTGGAAGAAACCAGAAATGAAGAGACGACGGCGCGTTGCAAAGTACAAGTTGTATGCAGTTGAAGGGAAGGTAAAGAGTTCCATAAAAAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGAAACAACTTTAATCGTATATATATTGTAAAATAAAACTATTATTTAAAACAAACAAACAAACAAACATACTTCTTCAATTTCTTTCATGGCTTTCGTTCTTCTTCTTTGTTCTTTCCATGCATTTGCTTTTAGAATAACGTAGGATGGTTGATAATGAAGATCAATTTGCTTTGCCTTACGTTGTTTAAATGCATAACGTTGTTTTTTATTCTCTGTTTGGATATTGAAAAAAAAATATAATGAAAAAACGATTATTGTGT ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAGTTGAGTGAAAACAAAATGTACTTAAATCAATCGCAAAAACGAGCCATTGTCGACCCATCGTTTGTGAAACGACATGTGGCCAAGACGAAGTCGGAATCGTCAAAAAGTTCGACGAAGAAGTCGTGGTGGAAGAAACCAGAAATGAAGAGACGACGGCGCGTTGCAAAGTACAAGTTGTATGCAGTTGAAGGGAAGGTAAAGAGTTCCATAAAAAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSSTKKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF Homology
BLAST of Clc10G05470 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 4.2e-42 Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Clc10G05470 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa]) HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41 Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of Clc10G05470 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia]) HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34 Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of Clc10G05470 vs. NCBI nr
Match: KAA0032381.1 (hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ96369.1 hypothetical protein E5676_scaffold1159G00320 [Cucumis melo var. makuwa]) HSP 1 Score: 151.8 bits (382), Expect = 3.6e-33 Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 0
BLAST of Clc10G05470 vs. NCBI nr
Match: KAG6600771.1 (hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31 Identity = 78/110 (70.91%), Postives = 88/110 (80.00%), Query Frame = 0
BLAST of Clc10G05470 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.0e-42 Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Clc10G05470 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.9e-42 Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of Clc10G05470 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 5.3e-35 Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of Clc10G05470 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33 Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 0
BLAST of Clc10G05470 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 4.0e-30 Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of Clc10G05470 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 67.4 bits (163), Expect = 8.2e-12 Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Clc10G05470 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.8 bits (133), Expect = 2.5e-08 Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Clc10G05470 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of Clc10G05470 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06 Identity = 21/56 (37.50%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of Clc10G05470 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 48.5 bits (114), Expect = 3.9e-06 Identity = 24/66 (36.36%), Postives = 41/66 (62.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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