Clc10G03370 (gene) Watermelon (cordophanus) v2

Overview
NameClc10G03370
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionE3 ubiquitin-protein ligase RNF181-like protein
LocationClcChr10: 3662422 .. 3663132 (-)
RNA-Seq ExpressionClc10G03370
SyntenyClc10G03370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTGGCAGCTGCTTCCACCTTCCGCTACAGTCTCCGCCGCAACGATGGGGCCGATCAATCTCTCCGAATCAGATTGGGGTTTTTGTGGCGTTTACTCTCCCGATCGCCGTCCGCCGGACTTCCGTACGAAATCCTCCGCGAAATTTCCTCGAGTTCAATGCGAGAGACTACATTCCGTCTCTATCTGCGAGAGCTCGAAGATCCATGGCTATGCCAAGCTTACATCGCACAATTGCTGTCCTCCTTGGACCTCGGCCCCGTAACCTGTGAAATAATCGGTCGGAAGATAACATCGGTCATCGTTGAAATATTGGAATCCGGAAACTACGATACGAAGTTCCAGATCACGGCGGAAATCGATCACGTCCAGATGTTCTGGGCGGAGGAGGAGCGGAGTTCGGTTCCGGTGGAGAGTGGCGAGTGGCGCGGTATTGTGGTGGAGGAGAGAGTGGTTTTGGAGGAAGCTCCGGCGAGGAGAATGGCGGTGGAGAGTGCGAGAGAGAGGTTGGAGATGGAGAAATTGGATGGGTTTGAGAGAGCAGAGTTGGGAGATTGCTGTGTTTGTTACGAAGAACTGAATGGTGGGAGGGAGAAGTTGAGTACAATCCGGTGTGGCCATGTCTATCATACATCCTGCATCCTCGCTTGGGTTCAAAGGAGCAACTCTTGTCCTTTGTGTAGAAGGGAAATAGAATTTGGAATTTAA

mRNA sequence

ATGTCTCTGGCAGCTGCTTCCACCTTCCGCTACAGTCTCCGCCGCAACGATGGGGCCGATCAATCTCTCCGAATCAGATTGGGGTTTTTGTGGCGTTTACTCTCCCGATCGCCGTCCGCCGGACTTCCGTACGAAATCCTCCGCGAAATTTCCTCGAGTTCAATGCGAGAGACTACATTCCGTCTCTATCTGCGAGAGCTCGAAGATCCATGGCTATGCCAAGCTTACATCGCACAATTGCTGTCCTCCTTGGACCTCGGCCCCGTAACCTGTGAAATAATCGGTCGGAAGATAACATCGGTCATCGTTGAAATATTGGAATCCGGAAACTACGATACGAAGTTCCAGATCACGGCGGAAATCGATCACGTCCAGATGTTCTGGGCGGAGGAGGAGCGGAGTTCGGTTCCGGTGGAGAGTGGCGAGTGGCGCGGTATTGTGGTGGAGGAGAGAGTGGTTTTGGAGGAAGCTCCGGCGAGGAGAATGGCGGTGGAGAGTGCGAGAGAGAGGTTGGAGATGGAGAAATTGGATGGGTTTGAGAGAGCAGAGTTGGGAGATTGCTGTGTTTGTTACGAAGAACTGAATGGTGGGAGGGAGAAGTTGAGTACAATCCGGTGTGGCCATGTCTATCATACATCCTGCATCCTCGCTTGGGTTCAAAGGAGCAACTCTTGTCCTTTGTGTAGAAGGGAAATAGAATTTGGAATTTAA

Coding sequence (CDS)

ATGTCTCTGGCAGCTGCTTCCACCTTCCGCTACAGTCTCCGCCGCAACGATGGGGCCGATCAATCTCTCCGAATCAGATTGGGGTTTTTGTGGCGTTTACTCTCCCGATCGCCGTCCGCCGGACTTCCGTACGAAATCCTCCGCGAAATTTCCTCGAGTTCAATGCGAGAGACTACATTCCGTCTCTATCTGCGAGAGCTCGAAGATCCATGGCTATGCCAAGCTTACATCGCACAATTGCTGTCCTCCTTGGACCTCGGCCCCGTAACCTGTGAAATAATCGGTCGGAAGATAACATCGGTCATCGTTGAAATATTGGAATCCGGAAACTACGATACGAAGTTCCAGATCACGGCGGAAATCGATCACGTCCAGATGTTCTGGGCGGAGGAGGAGCGGAGTTCGGTTCCGGTGGAGAGTGGCGAGTGGCGCGGTATTGTGGTGGAGGAGAGAGTGGTTTTGGAGGAAGCTCCGGCGAGGAGAATGGCGGTGGAGAGTGCGAGAGAGAGGTTGGAGATGGAGAAATTGGATGGGTTTGAGAGAGCAGAGTTGGGAGATTGCTGTGTTTGTTACGAAGAACTGAATGGTGGGAGGGAGAAGTTGAGTACAATCCGGTGTGGCCATGTCTATCATACATCCTGCATCCTCGCTTGGGTTCAAAGGAGCAACTCTTGTCCTTTGTGTAGAAGGGAAATAGAATTTGGAATTTAA

Protein sequence

MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTFRLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAEIDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFERAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIEFGI
Homology
BLAST of Clc10G03370 vs. NCBI nr
Match: XP_038876865.1 (putative RING-H2 finger protein ATL53 [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 7.2e-100
Identity = 185/236 (78.39%), Postives = 202/236 (85.59%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           MSL  ASTFRYSLRRNDG DQSL IRLGFLWRLLSRSPS+GLPYEIL EI SSS RETTF
Sbjct: 1   MSLETASTFRYSLRRNDGVDQSLHIRLGFLWRLLSRSPSSGLPYEILYEIPSSSPRETTF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LR+LEDP  C+AYIAQLL SLDLG VTC+I+ RKITSV+VE+LESGNYD KFQI AE
Sbjct: 61  PLSLRDLEDPLFCEAYIAQLLHSLDLGAVTCDIVARKITSVVVEVLESGNYDVKFQIAAE 120

Query: 121 IDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFE 180
           IDHVQMFWAEEERSSVPVE+GE RGIVVEER VLEEAPARR A E   +RL+MEK D  +
Sbjct: 121 IDHVQMFWAEEERSSVPVENGERRGIVVEERAVLEEAPARRRAAERESKRLKMEKFDELK 180

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIEFGI 237
           RAE+GDCCVCYEELN  R+++S IRCGH+YH SCIL W+Q  NSCPLCRREIEF I
Sbjct: 181 RAEMGDCCVCYEELNDVRKEVSRIRCGHIYHKSCILTWLQSRNSCPLCRREIEFEI 236

BLAST of Clc10G03370 vs. NCBI nr
Match: XP_038905732.1 (E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 8.6e-69
Identity = 139/233 (59.66%), Postives = 170/233 (72.96%), Query Frame = 0

Query: 2   SLAAASTFRYSLRRNDGA-DQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 61
           SL  ASTFR+SLRR+D + DQSL IRLGF+ R LSRSPSAGLPYEIL E +S  MR   F
Sbjct: 3   SLQTASTFRFSLRRHDDSDDQSLLIRLGFMHRQLSRSPSAGLPYEILHESNSIPMRINMF 62

Query: 62  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 121
            L LR+LEDP LC+ Y+ +LLS LDL  V C+II   ITS I E+L +GN++ KF+I A+
Sbjct: 63  PLPLRDLEDPLLCRVYVLRLLSYLDLNAVACDIIAHDITSFICEVLAAGNFEVKFRIVAD 122

Query: 122 IDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFE 181
           IDH++MFW E+   S        RG+V EE V+LEEAP RR A ++A ERL+ EK DGF 
Sbjct: 123 IDHIRMFWREQIGES-------RRGVVAEETVILEEAPTRRTAAKTAIERLKREKFDGFR 182

Query: 182 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIE 234
             ELGDCCVC EEL  G++++S I CGHVYH SCIL W Q ++SCPLCRR+IE
Sbjct: 183 GEELGDCCVCCEELKEGKKEVSRIGCGHVYHKSCILTWAQNNDSCPLCRRKIE 228

BLAST of Clc10G03370 vs. NCBI nr
Match: KAE8650076.1 (hypothetical protein Csa_011336 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-68
Identity = 148/241 (61.41%), Postives = 176/241 (73.03%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           M L +ASTFRYS+RR  G +QSL+IRLG + RLLS SPSAGLPYEIL+E +S  + E TF
Sbjct: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LR++ED  LC+ YI QLLSS +LG VT  II +KITS++VE+L +G+YD KF++ AE
Sbjct: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120

Query: 121 IDHVQM-FWAEEERSS--VPVESGEWRGIVVEERVVLEEAPARRMAVESARER-LEMEKL 180
           IDH++M FW EEE  S      + E RG+VVEERVVLE  P RR A E  RER  E EK 
Sbjct: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK 180

Query: 181 DGF-ERAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIEFG 237
            GF ER ELGDC VC EEL   R+++S IRCGHVYH SCIL WVQ  NSCPLCRRE+ F 
Sbjct: 181 GGFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVVFE 240

BLAST of Clc10G03370 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.4 bits (555), Expect = 6.6e-53
Identity = 112/233 (48.07%), Postives = 152/233 (65.24%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           MSLA  +TFR +L R DG DQ L+IR+G   RLL+ SP +G P+ I+ E   ++M +  F
Sbjct: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LRELEDP  CQAYI + LSS +LG      I R+I S +V+ +  GNY+  F I AE
Sbjct: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQ-MACGNYEMTFYIVAE 120

Query: 121 IDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFE 180
           ID++QMFW ++  ++   E  E      EE  + ++   RR A E+A ERL+ EK DGF 
Sbjct: 121 IDYIQMFWMDDSATAAEEEEDE-----EEETEIFDDFSGRRGAPETAIERLKKEKFDGFG 180

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIE 234
             +LG+C VCY+E+  G E++S I CGHVYH SC+L W+QR+NSCPLCR ++E
Sbjct: 181 GEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKLE 227

BLAST of Clc10G03370 vs. NCBI nr
Match: XP_023539471.1 (uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.3 bits (547), Expect = 5.6e-52
Identity = 115/240 (47.92%), Postives = 152/240 (63.33%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           MSLA ++TFR +L R D  DQ L+IR+    RLL+ SP +G P+ I+ E   ++M +  F
Sbjct: 1   MSLADSATFRCNLHRYDDPDQLLQIRIRHSTRLLTGSPFSGYPFNIVHETLPTTMADAQF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LRELEDP  CQAYI + LSS +LG      I R+I S +V+ +  GNY+  F I AE
Sbjct: 61  PLPLRELEDPLFCQAYIEEFLSSYNLGATIKNAIARRIASFVVQ-MACGNYEMTFYIVAE 120

Query: 121 IDHVQMFW-------AEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEM 180
           ID++QMFW       AEEE      E  E      EE V+ +    RR A E+A ERL+ 
Sbjct: 121 IDYIQMFWLDQSAIAAEEEEEEEEDEEEEEDEEEEEEEVIFDNFSGRRGAPETAIERLKK 180

Query: 181 EKLDGFERAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIE 234
           EK DGF   +LG+C VCY+E+  G E++S I CGHVYH SC+L W+QR+NSCPLCR+++E
Sbjct: 181 EKFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRKKLE 239

BLAST of Clc10G03370 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.7e-08
Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
           R  + +C +C EE      KL T +CGH +H +CILAW++RS +CP+C +E+
Sbjct: 98  REAIDECPICLEEYEIDNPKLLT-KCGHDFHLACILAWMERSEACPVCDKEL 148

BLAST of Clc10G03370 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.8e-08
Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = 0

Query: 186 DCC-VCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIEF 235
           DCC +C+E+ +    +L+T +C H +H SC+L W++RS+ CP+C +E+ F
Sbjct: 137 DCCPICFEDYDVENPRLTT-KCEHEFHLSCLLEWIERSDRCPICDKEVVF 185

BLAST of Clc10G03370 vs. ExPASy Swiss-Prot
Match: P90990 (E3 ubiquitin-protein ligase trul-1 OS=Caenorhabditis elegans OX=6239 GN=trul-1 PE=3 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 8.8e-08
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 0

Query: 185 GDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
           G C +C+E+L    +K+S I CGH+YH  CI  W+     CP CRR +
Sbjct: 11  GSCSICFEDLK-QNDKISAIVCGHIYHHGCISQWIATKRQCPSCRRTV 57

BLAST of Clc10G03370 vs. ExPASy Swiss-Prot
Match: Q9ZQF9 (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 21/45 (46.67%), Postives = 28/45 (62.22%), Query Frame = 0

Query: 187 CCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRRE 232
           CC+C EE   G + L T++CGH +H  CI  WV   N CP+C+ E
Sbjct: 656 CCICQEEYVEG-DNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

BLAST of Clc10G03370 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.4e-07
Identity = 20/52 (38.46%), Postives = 33/52 (63.46%), Query Frame = 0

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
           ++E+  C VC +E   G + +  + C HV+H  C+L W++  NSCP+CR E+
Sbjct: 210 KSEMNQCAVCMDEFEDGSD-VKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

BLAST of Clc10G03370 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 120/235 (51.06%), Postives = 153/235 (65.11%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           M  A AST RYSLRRN GADQ L++RLG+  RL+SRSPSAGLPY+IL E  S+ M +  F
Sbjct: 1   MPFANASTLRYSLRRNHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LRELEDP  C AY+ +L+SS +LG VT   I +KITS + +   + +YD KFQ+ A+
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQ-WAAVDYDAKFQLVAD 120

Query: 121 IDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFE 180
           ID++QMFW E+ R SV       RG++VEERVVLEE       V +A    E + + G E
Sbjct: 121 IDYIQMFWMEKHRGSV------GRGVMVEERVVLEET-----GVAAA----EKQGIGGEE 180

Query: 181 RAELGDCCVCYEEL---NGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
                 C VCYE      GG ++++ I CGH +H SCIL W QRSNSCPLCR ++
Sbjct: 181 ------CSVCYESYEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of Clc10G03370 vs. ExPASy TrEMBL
Match: A0A6J1L186 (NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 116/232 (50.00%), Postives = 150/232 (64.66%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           M LA AST RYSLRRN GADQ LR RL +  RL+SRSPSAGLPY+IL E  S+ M +  F
Sbjct: 1   MPLANASTLRYSLRRNHGADQFLRFRLCYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LRELEDP  C AY+ +L+SSL+L  ++C  I +KITS++ +   + +YD KFQ+ A+
Sbjct: 61  PLPLRELEDPLFCHAYLIELVSSLNLDSMSCNPIVQKITSLVTQ-WAAVDYDAKFQLVAD 120

Query: 121 IDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFE 180
           ID++QMFW E+   SV       RG++VEE+VVL+EA        +A E+       G  
Sbjct: 121 IDYIQMFWMEKRPGSV------GRGVMVEEKVVLKEAEV------AAAEK------QGIG 180

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
             E   C   YE   GG  +++ I CGHV+H SCIL W QRSNSCPLCR ++
Sbjct: 181 GEECSVCYESYEAEKGGEREVAKIPCGHVFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of Clc10G03370 vs. ExPASy TrEMBL
Match: A0A6J1G7R8 (E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451612 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50
Identity = 112/232 (48.28%), Postives = 152/232 (65.52%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           M  A +ST RYSLRR DG DQ L++RLG+  RL+SRSP +GLPY+IL E  S+ + +T F
Sbjct: 1   MLFANSSTLRYSLRRKDGTDQLLQVRLGYSSRLISRSPYSGLPYDILEETPSTLIADTLF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LRELEDP  C AY+ +L+SSL+L  ++C  I +KITS++ +   + +YD KFQ+ A+
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSLNLDSISCNPIAQKITSLVTQ-WAAVDYDLKFQLVAD 120

Query: 121 IDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFE 180
           ID++QMFW EE R  V       RG++VEE+VVLEEA    +A  SA  +       G  
Sbjct: 121 IDYIQMFWREESRGPVR------RGVMVEEKVVLEEA---GVAATSAAGK------QGMG 180

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
             E   C  CY+E  GG ++++ I CGH++H SCIL W   SNSCPLCR ++
Sbjct: 181 GEECSVCYECYDEEKGGDKEVAKIPCGHMFHKSCILTWFLCSNSCPLCRAKL 216

BLAST of Clc10G03370 vs. ExPASy TrEMBL
Match: A0A5D3D7E9 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001290 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.8e-49
Identity = 122/202 (60.40%), Postives = 144/202 (71.29%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGA-DQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETT 60
           M+L  ASTFRYS+RR +G+  QSL+IRLG +  LLSR PSAGLPYEIL+E SS S++E T
Sbjct: 1   MTLDGASTFRYSIRRKEGSIQQSLQIRLGRVVSLLSRPPSAGLPYEILKETSSISIQEAT 60

Query: 61  FRLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITA 120
           F L LR+LED  LC+ YI QLLSS +LG VT  II RKITS++VE+L +G+YDTKFQI A
Sbjct: 61  FPLPLRDLEDSCLCEIYIVQLLSSFNLGTVTSGIISRKITSMVVEVLAAGDYDTKFQIVA 120

Query: 121 EIDHVQM-FWAEEERSS----VPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEME 180
           EIDH+QM FW EEE  S        SG  RG+VVEERVVLE  PARR      R   E E
Sbjct: 121 EIDHIQMYFWGEEEERSWVGRGNNNSGIRRGVVVEERVVLEGVPARR------RAAAERE 180

Query: 181 KLDGFERA--ELGDCCVCYEEL 195
           +  GF+    +LGDCCVC EEL
Sbjct: 181 EKGGFDERGDQLGDCCVCREEL 196

BLAST of Clc10G03370 vs. ExPASy TrEMBL
Match: A0A6J1L191 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111499501 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48
Identity = 106/232 (45.69%), Postives = 149/232 (64.22%), Query Frame = 0

Query: 1   MSLAAASTFRYSLRRNDGADQSLRIRLGFLWRLLSRSPSAGLPYEILREISSSSMRETTF 60
           M  A +ST RYSLRR+ G DQ L++RLG+  RL+S+SPSAGLPY+IL E   + + +  F
Sbjct: 1   MLFANSSTLRYSLRRHHGTDQLLQVRLGYSSRLISQSPSAGLPYDILEETPLTPIADALF 60

Query: 61  RLYLRELEDPWLCQAYIAQLLSSLDLGPVTCEIIGRKITSVIVEILESGNYDTKFQITAE 120
            L LRELEDP  C AY+ +L+SSL+L  ++C  I +KITS++ +   + +YD KFQ+  +
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSLNLDSMSCNPIIQKITSLVTQ-WAAVDYDAKFQLVVD 120

Query: 121 IDHVQMFWAEEERSSVPVESGEWRGIVVEERVVLEEAPARRMAVESARERLEMEKLDGFE 180
           ID++QMFW EE R  V       RG++VEER+VL++A        +A  +       G  
Sbjct: 121 IDYIQMFWREESRGPVR------RGVMVEERIVLDKAGVAATVAAAAAGK------QGMG 180

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
             E   C  CY+E  GG ++++ I CGH++H SCIL W Q SNSCPLCR ++
Sbjct: 181 GEECSVCYECYDEEKGGDKEVAKIPCGHMFHKSCILTWFQCSNSCPLCRAKL 219

BLAST of Clc10G03370 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-09
Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 0

Query: 158 PARRMAVESAR------ERLEMEKLDGFERAELGDCCVCYEELNGGREKLSTIRCGHVYH 217
           PA + A+E+ R      E L  EK+          C +C EE   G E    ++C H+YH
Sbjct: 113 PASQSAIEAVRTVIITDEDLVKEKV----------CAICKEEFEVGEEG-KELKCLHLYH 172

Query: 218 TSCILAWVQRSNSCPLCRREIEFGI 237
           +SCI++W+   N+CP+CR E+  G+
Sbjct: 173 SSCIVSWLNIHNTCPICRFEVNLGV 186

BLAST of Clc10G03370 vs. TAIR 10
Match: AT5G41440.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09
Identity = 20/59 (33.90%), Postives = 35/59 (59.32%), Query Frame = 0

Query: 175 KLDGFERAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREIE 234
           K++  E  + G C +C EE   G E +   +C HV+H  C+L+W+  + +CP+CR  ++
Sbjct: 66  KVEDVEEGDEGCCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICRCSVD 124

BLAST of Clc10G03370 vs. TAIR 10
Match: AT4G23450.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.8e-09
Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
           R  + +C +C EE      KL T +CGH +H +CILAW++RS +CP+C +E+
Sbjct: 98  REAIDECPICLEEYEIDNPKLLT-KCGHDFHLACILAWMERSEACPVCDKEL 148

BLAST of Clc10G03370 vs. TAIR 10
Match: AT4G23450.2 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.8e-09
Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
           R  + +C +C EE      KL T +CGH +H +CILAW++RS +CP+C +E+
Sbjct: 153 REAIDECPICLEEYEIDNPKLLT-KCGHDFHLACILAWMERSEACPVCDKEL 203

BLAST of Clc10G03370 vs. TAIR 10
Match: AT4G23450.3 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.8e-09
Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0

Query: 181 RAELGDCCVCYEELNGGREKLSTIRCGHVYHTSCILAWVQRSNSCPLCRREI 233
           R  + +C +C EE      KL T +CGH +H +CILAW++RS +CP+C +E+
Sbjct: 153 REAIDECPICLEEYEIDNPKLLT-KCGHDFHLACILAWMERSEACPVCDKEL 203

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038876865.17.2e-10078.39putative RING-H2 finger protein ATL53 [Benincasa hispida][more]
XP_038905732.18.6e-6959.66E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida][more]
KAE8650076.11.9e-6861.41hypothetical protein Csa_011336 [Cucumis sativus][more]
XP_023539480.16.6e-5348.07E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo][more]
XP_023539471.15.6e-5247.92uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q93ZF66.7e-0844.23E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ... [more]
Q2HIJ88.8e-0842.00Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
P909908.8e-0843.75E3 ubiquitin-protein ligase trul-1 OS=Caenorhabditis elegans OX=6239 GN=trul-1 P... [more]
Q9ZQF92.6e-0746.67E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV... [more]
Q8LPN74.4e-0738.46E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
Match NameE-valueIdentityDescription
A0A6J1G7L11.3e-5151.06NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE... [more]
A0A6J1L1861.5e-5050.00NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4... [more]
A0A6J1G7R83.3e-5048.28E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451... [more]
A0A5D3D7E92.8e-4960.40E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A6J1L1911.8e-4845.69E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
Match NameE-valueIdentityDescription
AT1G68180.12.2e-0935.29RING/U-box superfamily protein [more]
AT5G41440.13.7e-0933.90RING/U-box superfamily protein [more]
AT4G23450.14.8e-0944.23RING/U-box superfamily protein [more]
AT4G23450.24.8e-0944.23RING/U-box superfamily protein [more]
AT4G23450.34.8e-0944.23RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 187..228
e-value: 1.6E-6
score: 37.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 186..229
e-value: 7.0E-12
score: 45.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 187..229
score: 12.740079
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 149..234
e-value: 1.7E-16
score: 61.7
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 134..233
NoneNo IPR availablePANTHERPTHR45931:SF9E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKEcoord: 134..233
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 186..234

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc10G03370.1Clc10G03370.1mRNA