Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCAGCTCTCCACCCAACAGAACCTTTTCTCCACCTTAAACAGGATCCTTAACATCAATCCCAACTCCAAGAAAAATACTCTTCCAAGTAACATCGCAAGAGCCACTCTTTCGTGTACCTGGTTGGAGAGAAATAATAGAACTTTCCATGGCAAAGATAAATCACAATGGAAGATATCATCAGCCTTGCCTCCTTGTGGTATGCTAAATCCAAAATCTTTTGAAATTACTCTACTTCTTGTATTGCTTTAAATTGGGAGGTCTTCCTATAATTGTAACACCTCCCTTTCGAGCTTTTCTCTAGCTCGCTTTTGTACTCAATCTTTTAACGTCAATGCATTTTGGTATTAGGATGTGATGAGGGTGCTAAAGGGTTGTCAACCTAGTTGAGTTGCCTCGGTACACCTACTAACCCTCTTGTCGTGTGAATATTTTCAAAAGAATAATTTAAAAAAAAATGAAAAAGTTATCAAAAAGAATCTTGCATAATGATACAAATGGAAGATGGAATTAAATAATAATCTAATTTTTTAGCCAAATGACATAGGCAAAAGCCACATTATAGTGCTTGCCGCTTGAACATCGGTTGAGGTGTATATCCAAATTAATCATCTTTGTTGCACGTGCACCCTCTTTACCACTAAGCTACCACACTATTGAGAAGCTATGGATCCTCGTTTCCTTTTCTATATAAGGAGATGATGGATGCATTCTAGGCATTCCTATCCATGGCTATCCCCAGGGTTGTGTGCTTTGGCTTTCTTTTCCTTGCAGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGACTATGATCCTCGTACACGTCACTATGATTATGATCGTCCTAGTCCTAGAGTAGGTTACGATCCTGGTCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCGTCTCTTGGAGGTTCCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATACGGTAATGGTGGTGGGTATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATTCTGGTGGAGGCTATGGAAATCGCTATGGCCCTTCCCTTGGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTTAAAAATTCCATCTCAAAGGAGAATTGA
mRNA sequence
ATGCACCAGCTCTCCACCCAACAGAACCTTTTCTCCACCTTAAACAGGATCCTTAACATCAATCCCAACTCCAAGAAAAATACTCTTCCAAGTAACATCGCAAGAGCCACTCTTTCGTGTACCTGGTTGGAGAGAAATAATAGAACTTTCCATGGCAAAGATAAATCACAATGGAAGATATCATCAGCCTTGCCTCCTTGTGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGACTATGATCCTCGTACACGTCACTATGATTATGATCGTCCTAGTCCTAGAGTAGGTTACGATCCTGGTCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCGTCTCTTGGAGGTTCCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATACGGTAATGGTGGTGGGTATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATTCTGGTGGAGGCTATGGAAATCGCTATGGCCCTTCCCTTGGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTTAAAAATTCCATCTCAAAGGAGAATTGA
Coding sequence (CDS)
ATGCACCAGCTCTCCACCCAACAGAACCTTTTCTCCACCTTAAACAGGATCCTTAACATCAATCCCAACTCCAAGAAAAATACTCTTCCAAGTAACATCGCAAGAGCCACTCTTTCGTGTACCTGGTTGGAGAGAAATAATAGAACTTTCCATGGCAAAGATAAATCACAATGGAAGATATCATCAGCCTTGCCTCCTTGTGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGACTATGATCCTCGTACACGTCACTATGATTATGATCGTCCTAGTCCTAGAGTAGGTTACGATCCTGGTCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCGTCTCTTGGAGGTTCCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATACGGTAATGGTGGTGGGTATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATTCTGGTGGAGGCTATGGAAATCGCTATGGCCCTTCCCTTGGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTTAAAAATTCCATCTCAAAGGAGAATTGA
Protein sequence
MHQLSTQQNLFSTLNRILNINPNSKKNTLPSNIARATLSCTWLERNNRTFHGKDKSQWKISSALPPCGLGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNSGGGYGNRYGPSLGGRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKEN
Homology
BLAST of Clc10G01700 vs. NCBI nr
Match:
XP_038903414.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 278.1 bits (710), Expect = 7.9e-71
Identity = 174/244 (71.31%), Postives = 181/244 (74.18%), Query Frame = 0
Query: 68 GLGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSL 127
G GLAS ARTLLDYDPRTR Y+YDRP+PRVGYDPGHRDESYDNAYGGSS+RGHGIGDS+
Sbjct: 16 GFGLASTARTLLDYDPRTRQYNYDRPTPRVGYDPGHRDESYDNAYGGSSNRGHGIGDSTF 75
Query: 128 GG-SGRYEGGGGRDSGYGGRNDD------------------------------------- 187
GG SGRYEGGGGRDSGYG RNDD
Sbjct: 76 GGYSGRYEGGGGRDSGYGSRNDDRGTGYGNGGGYKDVVGHDDGYGSNGGRGRDYGYGGQN 135
Query: 188 --RGVGYGNGGGYGGVGGHGDGYGSNSGGGYGNRYGPSL--------GGRGSGNGYGDSR 247
RGVGYGNGGGYG VG HGDGYGSN GGGYGN YGPSL GGRGSGNGYGDS
Sbjct: 136 GNRGVGYGNGGGYGSVGEHGDGYGSNGGGGYGNGYGPSLRGSTYGNGGGRGSGNGYGDSH 195
Query: 248 GYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSI 264
GYGARDNGYGSGGG G GYGGG+GS GYGNGGVH GEYDN+KGSGEEGGYDG YA+KNSI
Sbjct: 196 GYGARDNGYGSGGGAGGGYGGGNGSAGYGNGGVHRGEYDNNKGSGEEGGYDGRYALKNSI 255
BLAST of Clc10G01700 vs. NCBI nr
Match:
XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])
HSP 1 Score: 270.4 bits (690), Expect = 1.6e-68
Identity = 171/209 (81.82%), Postives = 176/209 (84.21%), Query Frame = 0
Query: 68 GLGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSL 127
GLGLASA RTLLDYDPRTRHY YDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDS+L
Sbjct: 16 GLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSAL 75
Query: 128 GGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNSGGGYGNRYGPSL- 187
GGSG YEGGG RD GYG RND+RGVGYGNGGGYGGVGGHGDGYG+N GGGYG+RYGPSL
Sbjct: 76 GGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNNGGGGYGDRYGPSLG 135
Query: 188 ------GGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHG 247
GG+GS NGY D S GYG RDNGYG G SGYG G G S GYGNGGVHG
Sbjct: 136 GSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHG 195
Query: 248 GEYDNSKGSGEEGGYDGGYAVKNSISKEN 264
GEYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 196 GEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of Clc10G01700 vs. NCBI nr
Match:
XP_038903641.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])
HSP 1 Score: 263.1 bits (671), Expect = 2.6e-66
Identity = 168/237 (70.89%), Postives = 175/237 (73.84%), Query Frame = 0
Query: 69 LGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSLG 128
LGLASAAR LLDYDPRTRHYDYDRPSPRVGYDP HRD SYDN+YGG S+RG+GIGDS+LG
Sbjct: 17 LGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSYGGGSNRGYGIGDSALG 76
Query: 129 GSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNSGGGYGNRYGPSLGG 188
GSGRYEGGG + Y NDDRGVGYGNGGGYGGVGGHGDGYGSN GGGY RYGPSLGG
Sbjct: 77 GSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGSNGGGGY--RYGPSLGG 136
Query: 189 RGSG-------------------------------------NGYGDSRGYGARDNGYGSG 248
G G NGYGDSRGYGARDNGYGSG
Sbjct: 137 SGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNGYGDSRGYGARDNGYGSG 196
Query: 249 GGVGSGY-----GGGSGSVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKEN 264
GGVG GY GG SGS GYGNGGVHGGEYDNSKGSGEEGGYDGGYA+KNSIS +N
Sbjct: 197 GGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYALKNSISNKN 251
BLAST of Clc10G01700 vs. NCBI nr
Match:
KAE8650024.1 (hypothetical protein Csa_011560 [Cucumis sativus])
HSP 1 Score: 248.8 bits (634), Expect = 5.1e-62
Identity = 164/208 (78.85%), Postives = 171/208 (82.21%), Query Frame = 0
Query: 69 LGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSLG 128
LGLASA RTLLDYDPRT Y YDRPSPRVGYDPGH DESYD AYGGSSSRGHGIGDS+LG
Sbjct: 32 LGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAYGGSSSRGHGIGDSALG 91
Query: 129 GSGRYEGGGGRDSGYGGRNDDRGVGYGN-GGGYGGVGGHGDGYGSNSGGGYGNRYGPSL- 188
GSG YEGGG D GYG R++DRGVGYGN GGGYGGVGGHGDGYG+N GG YG+RYGPSL
Sbjct: 92 GSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLG 151
Query: 189 ------GGRGSGNGYGD-SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHGG 248
GG+GSGNGY D SRG GARDN YG GG SGYG G G + GYGNGGVHGG
Sbjct: 152 GSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGG 211
Query: 249 EYDNSKGSGEEGGYDGGYAVKNSISKEN 264
EYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 212 EYDNSKGSGEEGGYDGGYAVKNSISKGN 238
BLAST of Clc10G01700 vs. NCBI nr
Match:
XP_011652712.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])
HSP 1 Score: 248.8 bits (634), Expect = 5.1e-62
Identity = 164/208 (78.85%), Postives = 171/208 (82.21%), Query Frame = 0
Query: 69 LGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSLG 128
LGLASA RTLLDYDPRT Y YDRPSPRVGYDPGH DESYD AYGGSSSRGHGIGDS+LG
Sbjct: 17 LGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAYGGSSSRGHGIGDSALG 76
Query: 129 GSGRYEGGGGRDSGYGGRNDDRGVGYGN-GGGYGGVGGHGDGYGSNSGGGYGNRYGPSL- 188
GSG YEGGG D GYG R++DRGVGYGN GGGYGGVGGHGDGYG+N GG YG+RYGPSL
Sbjct: 77 GSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLG 136
Query: 189 ------GGRGSGNGYGD-SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHGG 248
GG+GSGNGY D SRG GARDN YG GG SGYG G G + GYGNGGVHGG
Sbjct: 137 GSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGG 196
Query: 249 EYDNSKGSGEEGGYDGGYAVKNSISKEN 264
EYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 197 EYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of Clc10G01700 vs. ExPASy Swiss-Prot
Match:
P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)
HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05
Identity = 72/155 (46.45%), Postives = 80/155 (51.61%), Query Frame = 0
Query: 113 GGSSSRGHGIGDSSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVG-GHGDGYG 172
GG+ G+G G GG G Y GGG GYGG G G G GGG GG G G+G G G
Sbjct: 100 GGADGGGYGGGAGKGGGEG-YGGGGANGGGYGGGG---GSGGGGGGGAGGAGSGYGGGEG 159
Query: 173 SNSGGGYGNRYGPSLGGR--GSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGS------- 232
S +GGGYG G GG G G G G + G GA G G+G G G GYGGG+
Sbjct: 160 SGAGGGYGGANGGGGGGNGGGGGGGSGGAHGGGAAGGGEGAGQGAGGGYGGGAAGGGGRG 219
Query: 233 ----GSVGYGNGGVHGGEYDNSKGSGEEGGYDGGY 254
G GYG GG G Y GSGE GG+ GGY
Sbjct: 220 SGGGGGGGYGGGGARGSGYGGGGGSGEGGGHGGGY 250
BLAST of Clc10G01700 vs. ExPASy Swiss-Prot
Match:
P35527 (Keratin, type I cytoskeletal 9 OS=Homo sapiens OX=9606 GN=KRT9 PE=1 SV=3)
HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04
Identity = 77/152 (50.66%), Postives = 81/152 (53.29%), Query Frame = 0
Query: 113 GGSSSRGHGIGDSSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGS 172
GG G G S GGSG GGGG GYGG + RG G+GG YGG G G G
Sbjct: 476 GGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRG---GSGGSYGG----GSGSGG 535
Query: 173 NSGGGYGNRYGPSLGGRGSGNGYGDSRGYGAR-DNGYGSGGGVGSGYGGGSGSVGYGNGG 232
SGGGYG G S GG G+G G S G G G GSGGG G GYGGGSGS G G+GG
Sbjct: 536 GSGGGYG---GGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRG-GSGG 595
Query: 233 VH------GGEYDNSKGSGEE-----GGYDGG 253
H GGE S G GEE GGY GG
Sbjct: 596 SHGGGSGFGGESGGSYGGGEEASGSGGGYGGG 616
BLAST of Clc10G01700 vs. ExPASy TrEMBL
Match:
A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 7.9e-69
Identity = 171/209 (81.82%), Postives = 176/209 (84.21%), Query Frame = 0
Query: 68 GLGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSL 127
GLGLASA RTLLDYDPRTRHY YDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDS+L
Sbjct: 16 GLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSAL 75
Query: 128 GGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNSGGGYGNRYGPSL- 187
GGSG YEGGG RD GYG RND+RGVGYGNGGGYGGVGGHGDGYG+N GGGYG+RYGPSL
Sbjct: 76 GGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNNGGGGYGDRYGPSLG 135
Query: 188 ------GGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHG 247
GG+GS NGY D S GYG RDNGYG G SGYG G G S GYGNGGVHG
Sbjct: 136 GSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHG 195
Query: 248 GEYDNSKGSGEEGGYDGGYAVKNSISKEN 264
GEYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 196 GEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of Clc10G01700 vs. ExPASy TrEMBL
Match:
A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 7.9e-69
Identity = 171/209 (81.82%), Postives = 176/209 (84.21%), Query Frame = 0
Query: 68 GLGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSL 127
GLGLASA RTLLDYDPRTRHY YDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDS+L
Sbjct: 16 GLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSAL 75
Query: 128 GGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNSGGGYGNRYGPSL- 187
GGSG YEGGG RD GYG RND+RGVGYGNGGGYGGVGGHGDGYG+N GGGYG+RYGPSL
Sbjct: 76 GGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGNNGGGGYGDRYGPSLG 135
Query: 188 ------GGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHG 247
GG+GS NGY D S GYG RDNGYG G SGYG G G S GYGNGGVHG
Sbjct: 136 GSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHG 195
Query: 248 GEYDNSKGSGEEGGYDGGYAVKNSISKEN 264
GEYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 196 GEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of Clc10G01700 vs. ExPASy TrEMBL
Match:
A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62
Identity = 164/208 (78.85%), Postives = 171/208 (82.21%), Query Frame = 0
Query: 69 LGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSLG 128
LGLASA RTLLDYDPRT Y YDRPSPRVGYDPGH DESYD AYGGSSSRGHGIGDS+LG
Sbjct: 17 LGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAYGGSSSRGHGIGDSALG 76
Query: 129 GSGRYEGGGGRDSGYGGRNDDRGVGYGN-GGGYGGVGGHGDGYGSNSGGGYGNRYGPSL- 188
GSG YEGGG D GYG R++DRGVGYGN GGGYGGVGGHGDGYG+N GG YG+RYGPSL
Sbjct: 77 GSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLG 136
Query: 189 ------GGRGSGNGYGD-SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHGG 248
GG+GSGNGY D SRG GARDN YG GG SGYG G G + GYGNGGVHGG
Sbjct: 137 GSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGG 196
Query: 249 EYDNSKGSGEEGGYDGGYAVKNSISKEN 264
EYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 197 EYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of Clc10G01700 vs. ExPASy TrEMBL
Match:
A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 6.7e-60
Identity = 167/277 (60.29%), Postives = 177/277 (63.90%), Query Frame = 0
Query: 69 LGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSLG 128
LGLASAARTLLDYDPRTR YDYD P+PRVGYDP HRD+SYDNAYGGSS+RG+G+GDS+LG
Sbjct: 17 LGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAYGGSSNRGYGVGDSALG 76
Query: 129 GSGRYEGGGGRD------------------------------------------------ 188
GSGRYEGGGG D
Sbjct: 77 GSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGRNDDRGAGYGGRNDDRG 136
Query: 189 ----------------------SGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNSGGGY 248
+GYGGRNDDRGVGYGNGGGYGGVGGHGDGYG+N GGGY
Sbjct: 137 AGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGNNVGGGY 196
Query: 249 GNRYGPSL-------GGRGSGNGYGD-SRGYGARDNGYGSG---GGVGSGYGGGSG-SVG 264
G+RY PSL GG+GSGNGY D SRGYG DNGYG GG SGYG G G S G
Sbjct: 197 GDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGHGGRDSGYGSGGGVSGG 256
BLAST of Clc10G01700 vs. ExPASy TrEMBL
Match:
A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 6.7e-60
Identity = 167/277 (60.29%), Postives = 177/277 (63.90%), Query Frame = 0
Query: 69 LGLASAARTLLDYDPRTRHYDYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSSLG 128
LGLASAARTLLDYDPRTR YDYD P+PRVGYDP HRD+SYDNAYGGSS+RG+G+GDS+LG
Sbjct: 17 LGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAYGGSSNRGYGVGDSALG 76
Query: 129 GSGRYEGGGGRD------------------------------------------------ 188
GSGRYEGGGG D
Sbjct: 77 GSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGRNDDRGAGYGGRNDDRG 136
Query: 189 ----------------------SGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNSGGGY 248
+GYGGRNDDRGVGYGNGGGYGGVGGHGDGYG+N GGGY
Sbjct: 137 AGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGNNVGGGY 196
Query: 249 GNRYGPSL-------GGRGSGNGYGD-SRGYGARDNGYGSG---GGVGSGYGGGSG-SVG 264
G+RY PSL GG+GSGNGY D SRGYG DNGYG GG SGYG G G S G
Sbjct: 197 GDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGHGGRDSGYGSGGGVSGG 256
BLAST of Clc10G01700 vs. TAIR 10
Match:
AT2G36120.1 (Glycine-rich protein family )
HSP 1 Score: 42.7 bits (99), Expect = 5.2e-04
Identity = 83/202 (41.09%), Postives = 94/202 (46.53%), Query Frame = 0
Query: 68 GLGLASAARTLL---DYDPRTRHYDYDRP-----SPRVGYDPGHRDESYDNAYGGSSSRG 127
GLGL SA R LL + + Y + +G PG + G + G
Sbjct: 15 GLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGGGSGYGGGSGEGGGAGG 74
Query: 128 HGIGDSSLGGSGRY------EGGGGRDSGYGGRNDDRGVGYGNGGGYGG--VGGHGDGYG 187
HG G GG G + GGGG GYGG G G G G GYGG GGHG G G
Sbjct: 75 HGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGG-----GSGEGGGAGYGGGEAGGHGGGGG 134
Query: 188 SNSGGGYGNRYGPSLGGRGSGNGYGDSRGYGARD-NGYGSGGGVGSGYGGGSGSVGYGNG 247
+GGG G G GG G G G G GYG G+G GGG G+G GGG GS G G
Sbjct: 135 GGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGS---GEG 194
Query: 248 GVHGGEYDNSKGSGEEGGYDGG 253
G HGG Y G+GE GY GG
Sbjct: 195 GAHGGGYGAGGGAGE--GYGGG 206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038903414.1 | 7.9e-71 | 71.31 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
XP_008449165.1 | 1.6e-68 | 81.82 | PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA... | [more] |
XP_038903641.1 | 2.6e-66 | 70.89 | glycine-rich cell wall structural protein 2-like [Benincasa hispida] | [more] |
KAE8650024.1 | 5.1e-62 | 78.85 | hypothetical protein Csa_011560 [Cucumis sativus] | [more] |
XP_011652712.1 | 5.1e-62 | 78.85 | glycine-rich cell wall structural protein 2 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
P10495 | 6.0e-05 | 46.45 | Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2... | [more] |
P35527 | 3.0e-04 | 50.66 | Keratin, type I cytoskeletal 9 OS=Homo sapiens OX=9606 GN=KRT9 PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UHU2 | 7.9e-69 | 81.82 | Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O... | [more] |
A0A1S3BMC4 | 7.9e-69 | 81.82 | glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
A0A0A0L1V3 | 2.5e-62 | 78.85 | Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1 | [more] |
A0A5A7UEU3 | 6.7e-60 | 60.29 | Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O... | [more] |
A0A1S3BM26 | 6.7e-60 | 60.29 | glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
Match Name | E-value | Identity | Description | |
AT2G36120.1 | 5.2e-04 | 41.09 | Glycine-rich protein family | [more] |