Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCTTTAGAACTTTGTTTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCGTAGCTTCGGCAGTCAGAACTCTTCTCTCCTATGATCCTCCACATCTTTCTAGATATGATAATTATGATCATCCTATACATAACCCGAAAGTAGGATACGAACGTGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGACTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGATCATGGGGCTAGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGAGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACACGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
mRNA sequence
ATGGCTATCTTTAGAACTTTGTTTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCGTAGCTTCGGCAGTCAGAACTCTTCTCTCCTATGATCCTCCACATCTTTCTAGATATGATAATTATGATCATCCTATACATAACCCGAAAGTAGGATACGAACGTGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGACTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGATCATGGGGCTAGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGAGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACACGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
Coding sequence (CDS)
ATGGCTATCTTTAGAACTTTGTTTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCGTAGCTTCGGCAGTCAGAACTCTTCTCTCCTATGATCCTCCACATCTTTCTAGATATGATAATTATGATCATCCTATACATAACCCGAAAGTAGGATACGAACGTGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGACTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGATCATGGGGCTAGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGAGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACACGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
Protein sequence
MAIFRTLFFGFLLLVGLGVASAVRTLLSYDPPHLSRYDNYDHPIHNPKVGYERDHHDGPYGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGAGSGYGGSGEEGGYDGGYAP
Homology
BLAST of Clc10G01690 vs. NCBI nr
Match:
XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 323.6 bits (828), Expect = 1.6e-84
Identity = 235/256 (91.80%), Postives = 237/256 (92.58%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYERDHHDGP 60
MAI RTL FGFLLLVGLG+ASA R LLSYD PPH S YDNYDHP+HNPKVGYERDHHDGP
Sbjct: 9 MAILRTLSFGFLLLVGLGLASATRALLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDGP 68
Query: 61 YGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGG 120
YGGGAGGGYGGGA SSLGGSGYGSGGGGGSGYAG GDHG YGSGGGGGYGAGVGSDLGG
Sbjct: 69 YGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGYAGAGDHGVGYGSGGGGGYGAGVGSDLGG 128
Query: 121 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAG 180
SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG GYGSGGGGGYGSG GAG
Sbjct: 129 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGAG 188
Query: 181 SYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGAGSG 240
YGPG EHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAH GSGGGAGSG
Sbjct: 189 -YGPGVEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAH----GSGGGAGSG 248
Query: 241 YGGSGEEGGYDGGYAP 256
YGGSGEEGGYDGGYAP
Sbjct: 249 YGGSGEEGGYDGGYAP 259
BLAST of Clc10G01690 vs. NCBI nr
Match:
XP_038903617.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 312.8 bits (800), Expect = 2.8e-81
Identity = 229/256 (89.45%), Postives = 233/256 (91.02%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYERDHHDGP 60
M IFR L FG LLLVGLG+ASA RTLLSYD PPH S YDNYDHP+HNPKVGYERDHHDGP
Sbjct: 1 MDIFRNLSFGLLLLVGLGLASATRTLLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDGP 60
Query: 61 YGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGG 120
YGGGA GGYGGGA SSLGGSGYGSGGGGGSGY GVGDHG YGSGGGGGYGAGVGSDLGG
Sbjct: 61 YGGGAAGGYGGGAGSSLGGSGYGSGGGGGSGYTGVGDHGVGYGSGGGGGYGAGVGSDLGG 120
Query: 121 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAG 180
SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGY GRGDHG GYGSGGGGGYGSG G
Sbjct: 121 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYEGRGDHGVGYGSGGGGGYGSG-GGV 180
Query: 181 SYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGAGSG 240
+GPG HG+GYGSGGGGGSG GYGGSKGY GGSGGGGGAGYGGGAHGSGYGSGGGAGSG
Sbjct: 181 EHGPGVGHGIGYGSGGGGGSGGGYGGSKGYEGGSGGGGGAGYGGGAHGSGYGSGGGAGSG 240
Query: 241 YGGSGEEGGYDGGYAP 256
YGGSGEEGGYDGGYAP
Sbjct: 241 YGGSGEEGGYDGGYAP 255
BLAST of Clc10G01690 vs. NCBI nr
Match:
XP_011650342.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])
HSP 1 Score: 276.2 bits (705), Expect = 2.9e-70
Identity = 220/268 (82.09%), Postives = 228/268 (85.07%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
Query: 61 ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
RDHHD PYGGGAGGGY G GA SSLGGSGYGSGGGGGSGY GVG+H YGSGGGG
Sbjct: 61 YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
GGGGYGSGVG G+ +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
SGYGSGGGA GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261
BLAST of Clc10G01690 vs. NCBI nr
Match:
BAA34064.1 (glycine-rich protein-2, partial [Cucumis sativus])
HSP 1 Score: 275.0 bits (702), Expect = 6.4e-70
Identity = 219/268 (81.72%), Postives = 228/268 (85.07%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
Query: 61 ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
RDHHD PYGGGAGGGY G GA SSLGGSGYGSGGGGGSGY GVG+H YGSGGGG
Sbjct: 61 YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
GGGGYGSGVG G+ +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
SGYGSGGGA GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261
BLAST of Clc10G01690 vs. NCBI nr
Match:
XP_008448673.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])
HSP 1 Score: 274.2 bits (700), Expect = 1.1e-69
Identity = 222/270 (82.22%), Postives = 230/270 (85.19%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYD-NYD-HPIHNPKVGYERDHHD 60
MAI +TL FGFLLLV LG+ASA R+LL YD PPH S YD NYD HP+ NPKVGYE DHHD
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
Query: 61 G----------PYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGG 120
G PYGGGAGGGY GGGA SSLGGSGYGSGGGGGSGY GVG+HG YGSGG
Sbjct: 61 GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
SGGGGGYGSGVG G G +HGVGYGSGGGGG+G GYGGSKGYG GSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVG----GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGA 240
Query: 241 HGSGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
HGSGYGSGGGAG+ GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGAGA---GSGEEGGYDGGYAP 263
BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match:
A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 1.4e-70
Identity = 220/268 (82.09%), Postives = 228/268 (85.07%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
Query: 61 ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
RDHHD PYGGGAGGGY G GA SSLGGSGYGSGGGGGSGY GVG+H YGSGGGG
Sbjct: 61 YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
GGGGYGSGVG G+ +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
SGYGSGGGA GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261
BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match:
Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)
HSP 1 Score: 275.0 bits (702), Expect = 3.1e-70
Identity = 219/268 (81.72%), Postives = 228/268 (85.07%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
Query: 61 ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
RDHHD PYGGGAGGGY G GA SSLGGSGYGSGGGGGSGY GVG+H YGSGGGG
Sbjct: 61 YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
GGGGYGSGVG G+ +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
SGYGSGGGA GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261
BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match:
A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)
HSP 1 Score: 274.2 bits (700), Expect = 5.3e-70
Identity = 222/270 (82.22%), Postives = 230/270 (85.19%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYD-NYD-HPIHNPKVGYERDHHD 60
MAI +TL FGFLLLV LG+ASA R+LL YD PPH S YD NYD HP+ NPKVGYE DHHD
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
Query: 61 G----------PYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGG 120
G PYGGGAGGGY GGGA SSLGGSGYGSGGGGGSGY GVG+HG YGSGG
Sbjct: 61 GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
SGGGGGYGSGVG G G +HGVGYGSGGGGG+G GYGGSKGYG GSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVG----GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGA 240
Query: 241 HGSGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
HGSGYGSGGGAG+ GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGAGA---GSGEEGGYDGGYAP 263
BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match:
A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 197/260 (75.77%), Postives = 210/260 (80.77%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYDPPHLSRYDNYDHPIHNPKVGYERDHHDGPY 60
MAI + FLLL+G G+ASA RTLL ++P + YD +VGY+RDHHDG Y
Sbjct: 1 MAISKAFSLSFLLLLGFGLASAARTLLGHEPDAYNPYDR--------RVGYDRDHHDGAY 60
Query: 61 GGGAGGGYGGGADSSLGGSGYGS--GGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLG 120
GGG+GGGYG GA SSLGGSGYGS GGGGGSGY G GDHG YGSGGGGGYG G+GS LG
Sbjct: 61 GGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLG 120
Query: 121 GSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGA 180
G+GYGSGGGGGSGGGYGD GG GKGYGSGGGGGSGYGG GDHGAGYGSGGGGGYGSG G
Sbjct: 121 GAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGG 180
Query: 181 GS-YGPGGEHGVGYGSGGGGGSGSGYGGSK-GYGGGSGG--GGGAGYG-GGAHGSGYGSG 240
G+ YGP GEHGVGYGSGGGGGSG GYGGSK GYGGGSGG GGG GYG GGAHG GYG G
Sbjct: 181 GAGYGP-GEHGVGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGG 240
Query: 241 GGAGSGYGGSGEEGGYDGGY 254
GG+G GYG SGEEGGYDGGY
Sbjct: 241 GGSGGGYGSSGEEGGYDGGY 251
BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match:
A0A6J1E911 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431731 PE=4 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 198/282 (70.21%), Postives = 208/282 (73.76%), Query Frame = 0
Query: 1 MAIFRTLFFGFLLLVGLGVASAVRTLLSYDPPHLSRYDNYDHPIHNPKVGYERDHHDGP- 60
MAI ++L FLLL+GLG+ASA RTLLSYDPPH S Y + HNP+VGY+ DHHDGP
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDV-GYGYQ-HNPRVGYDHDHHDGPY 60
Query: 61 --YGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGD--------------------- 120
YGGG+GGGYG GA SSLGGSGYGSGGGGGSGYAGVGD
Sbjct: 61 GAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
Query: 121 --HGASYGSGGGGGYGAGVGSDLG--GSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGS 180
HG YGSGGGGG G G G DLG G GYGSGGGGGSG GYGDLGGHGKGYGSGGGGGS
Sbjct: 121 GGHGKGYGSGGGGGSGVGYG-DLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGS 180
Query: 181 GYGGRGDHGAGYGSGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGG 240
GYGG DHG GYGSGGGGGYG+G GAG YGPGG+HGVGYGSGGGGGSG GY
Sbjct: 181 GYGGGADHGVGYGSGGGGGYGAGGGAG-YGPGGDHGVGYGSGGGGGSGGGY--------- 240
Query: 241 SGGGGGAGYGGGAHGSGYGSGGGAGSGYGG-SGEEGGYDGGY 254
GGG GYGGGA GSGYGSGGGAGSGYGG GEEGGYDGGY
Sbjct: 241 --GGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 267
BLAST of Clc10G01690 vs. TAIR 10
Match:
AT5G46730.1 (glycine-rich protein )
HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05
Identity = 114/196 (58.16%), Postives = 120/196 (61.22%), Query Frame = 0
Query: 61 GGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGGS 120
G G GGGYGG A GG G GSGGGGGS Y G+H + YG+G G G GAG S GG
Sbjct: 105 GEGGGGGYGGAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAGEGGGAG-ASGYGGG 164
Query: 121 GYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAGS 180
YG GGG G GGG G GG G G GGG G G GG G HG G GGGGG GSG G G+
Sbjct: 165 AYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSG-GGGA 224
Query: 181 YGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGG-GGAGYGGGAHGSGYGSGGGAGSG 240
YG GG HG GYGSGGG G G G G + GYGGG GGG GG G GG HG G G G G G G
Sbjct: 225 YGGGGAHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSGGGHGGGGG 284
Query: 241 YGGSGEEGGYDGGYAP 256
+GG GGYAP
Sbjct: 285 HGG--------GGYAP 290
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038905926.1 | 1.6e-84 | 91.80 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
XP_038903617.1 | 2.8e-81 | 89.45 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
XP_011650342.1 | 2.9e-70 | 82.09 | glycine-rich cell wall structural protein 2 [Cucumis sativus] | [more] |
BAA34064.1 | 6.4e-70 | 81.72 | glycine-rich protein-2, partial [Cucumis sativus] | [more] |
XP_008448673.1 | 1.1e-69 | 82.22 | PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L1U7 | 1.4e-70 | 82.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1 | [more] |
Q9ZWM2 | 3.1e-70 | 81.72 | Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1 | [more] |
A0A1S3BJM7 | 5.3e-70 | 82.22 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A6J1CWP3 | 1.3e-55 | 75.77 | glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara... | [more] |
A0A6J1E911 | 1.1e-51 | 70.21 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662... | [more] |
Match Name | E-value | Identity | Description | |
AT5G46730.1 | 2.7e-05 | 58.16 | glycine-rich protein | [more] |