Clc10G01690 (gene) Watermelon (cordophanus) v2

Overview
NameClc10G01690
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich cell wall structural protein 1.8-like
LocationClcChr10: 1572858 .. 1573625 (+)
RNA-Seq ExpressionClc10G01690
SyntenyClc10G01690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCTTTAGAACTTTGTTTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCGTAGCTTCGGCAGTCAGAACTCTTCTCTCCTATGATCCTCCACATCTTTCTAGATATGATAATTATGATCATCCTATACATAACCCGAAAGTAGGATACGAACGTGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGACTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGATCATGGGGCTAGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGAGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACACGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

mRNA sequence

ATGGCTATCTTTAGAACTTTGTTTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCGTAGCTTCGGCAGTCAGAACTCTTCTCTCCTATGATCCTCCACATCTTTCTAGATATGATAATTATGATCATCCTATACATAACCCGAAAGTAGGATACGAACGTGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGACTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGATCATGGGGCTAGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGAGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACACGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Coding sequence (CDS)

ATGGCTATCTTTAGAACTTTGTTTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCGTAGCTTCGGCAGTCAGAACTCTTCTCTCCTATGATCCTCCACATCTTTCTAGATATGATAATTATGATCATCCTATACATAACCCGAAAGTAGGATACGAACGTGATCATCATGATGGACCTTATGGTGGTGGTGCTGGTGGTGGATATGGAGGCGGAGCTGACTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTTCTGGATATGCAGGTGTAGGAGATCATGGGGCTAGTTATGGTAGTGGTGGAGGTGGTGGATATGGAGCAGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGCGGAGGGAGTGGCGGAGGATATGGTGATCTAGGAGGACATGGAAAAGGGTATGGAAGTGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGCTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGCAGGATCATATGGTCCAGGAGGAGAACATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGTCAGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACACGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGTGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Protein sequence

MAIFRTLFFGFLLLVGLGVASAVRTLLSYDPPHLSRYDNYDHPIHNPKVGYERDHHDGPYGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGAGSGYGGSGEEGGYDGGYAP
Homology
BLAST of Clc10G01690 vs. NCBI nr
Match: XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 323.6 bits (828), Expect = 1.6e-84
Identity = 235/256 (91.80%), Postives = 237/256 (92.58%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYERDHHDGP 60
           MAI RTL FGFLLLVGLG+ASA R LLSYD PPH S YDNYDHP+HNPKVGYERDHHDGP
Sbjct: 9   MAILRTLSFGFLLLVGLGLASATRALLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDGP 68

Query: 61  YGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGG 120
           YGGGAGGGYGGGA SSLGGSGYGSGGGGGSGYAG GDHG  YGSGGGGGYGAGVGSDLGG
Sbjct: 69  YGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGYAGAGDHGVGYGSGGGGGYGAGVGSDLGG 128

Query: 121 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAG 180
           SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG GYGSGGGGGYGSG GAG
Sbjct: 129 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGAG 188

Query: 181 SYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGAGSG 240
            YGPG EHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAH    GSGGGAGSG
Sbjct: 189 -YGPGVEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAH----GSGGGAGSG 248

Query: 241 YGGSGEEGGYDGGYAP 256
           YGGSGEEGGYDGGYAP
Sbjct: 249 YGGSGEEGGYDGGYAP 259

BLAST of Clc10G01690 vs. NCBI nr
Match: XP_038903617.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 2.8e-81
Identity = 229/256 (89.45%), Postives = 233/256 (91.02%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYERDHHDGP 60
           M IFR L FG LLLVGLG+ASA RTLLSYD PPH S YDNYDHP+HNPKVGYERDHHDGP
Sbjct: 1   MDIFRNLSFGLLLLVGLGLASATRTLLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDGP 60

Query: 61  YGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGG 120
           YGGGA GGYGGGA SSLGGSGYGSGGGGGSGY GVGDHG  YGSGGGGGYGAGVGSDLGG
Sbjct: 61  YGGGAAGGYGGGAGSSLGGSGYGSGGGGGSGYTGVGDHGVGYGSGGGGGYGAGVGSDLGG 120

Query: 121 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAG 180
           SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGY GRGDHG GYGSGGGGGYGSG G  
Sbjct: 121 SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYEGRGDHGVGYGSGGGGGYGSG-GGV 180

Query: 181 SYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGAGSG 240
            +GPG  HG+GYGSGGGGGSG GYGGSKGY GGSGGGGGAGYGGGAHGSGYGSGGGAGSG
Sbjct: 181 EHGPGVGHGIGYGSGGGGGSGGGYGGSKGYEGGSGGGGGAGYGGGAHGSGYGSGGGAGSG 240

Query: 241 YGGSGEEGGYDGGYAP 256
           YGGSGEEGGYDGGYAP
Sbjct: 241 YGGSGEEGGYDGGYAP 255

BLAST of Clc10G01690 vs. NCBI nr
Match: XP_011650342.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 2.9e-70
Identity = 220/268 (82.09%), Postives = 228/268 (85.07%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
           MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE       
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
              RDHHD PYGGGAGGGY  G GA SSLGGSGYGSGGGGGSGY GVG+H   YGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
           GGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240

Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
           SGYGSGGGA     GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261

BLAST of Clc10G01690 vs. NCBI nr
Match: BAA34064.1 (glycine-rich protein-2, partial [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 6.4e-70
Identity = 219/268 (81.72%), Postives = 228/268 (85.07%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
           MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE       
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
              RDHHD PYGGGAGGGY  G GA SSLGGSGYGSGGGGGSGY GVG+H   YGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
           GGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240

Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
           SGYGSGGGA     GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261

BLAST of Clc10G01690 vs. NCBI nr
Match: XP_008448673.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-69
Identity = 222/270 (82.22%), Postives = 230/270 (85.19%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYD-NYD-HPIHNPKVGYERDHHD 60
           MAI +TL FGFLLLV LG+ASA R+LL YD PPH S YD NYD HP+ NPKVGYE DHHD
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  G----------PYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGG 120
           G          PYGGGAGGGY  GGGA SSLGGSGYGSGGGGGSGY GVG+HG  YGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
           SGGGGGYGSGVG    G G +HGVGYGSGGGGG+G GYGGSKGYG GSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVG----GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGA 240

Query: 241 HGSGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
           HGSGYGSGGGAG+   GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGAGA---GSGEEGGYDGGYAP 263

BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match: A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.4e-70
Identity = 220/268 (82.09%), Postives = 228/268 (85.07%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
           MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE       
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
              RDHHD PYGGGAGGGY  G GA SSLGGSGYGSGGGGGSGY GVG+H   YGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
           GGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240

Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
           SGYGSGGGA     GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261

BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match: Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 3.1e-70
Identity = 219/268 (81.72%), Postives = 228/268 (85.07%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYDNYDHPIHNPKVGYE------- 60
           MAI +TL FGFLLLV LG+ASA R+LLSYD PPH S YDNYDHP+ NPKVGYE       
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  ---RDHHDGPYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGG 120
              RDHHD PYGGGAGGGY  G GA SSLGGSGYGSGGGGGSGY GVG+H   YGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHG GYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
           GGGGYGSGVG G+     +HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHG
Sbjct: 181 GGGGYGSGVGGGA--GVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240

Query: 241 SGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
           SGYGSGGGA     GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGA-----GSGEEGGYDGGYAP 261

BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match: A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 5.3e-70
Identity = 222/270 (82.22%), Postives = 230/270 (85.19%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYD-PPHLSRYD-NYD-HPIHNPKVGYERDHHD 60
           MAI +TL FGFLLLV LG+ASA R+LL YD PPH S YD NYD HP+ NPKVGYE DHHD
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  G----------PYGGGAGGGY--GGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGG 120
           G          PYGGGAGGGY  GGGA SSLGGSGYGSGGGGGSGY GVG+HG  YGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHG GYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGA 240
           SGGGGGYGSGVG    G G +HGVGYGSGGGGG+G GYGGSKGYG GSGGGGGAGYGGGA
Sbjct: 181 SGGGGGYGSGVG----GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGA 240

Query: 241 HGSGYGSGGGAGSGYGGSGEEGGYDGGYAP 256
           HGSGYGSGGGAG+   GSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGAGA---GSGEEGGYDGGYAP 263

BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match: A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 197/260 (75.77%), Postives = 210/260 (80.77%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYDPPHLSRYDNYDHPIHNPKVGYERDHHDGPY 60
           MAI +     FLLL+G G+ASA RTLL ++P   + YD         +VGY+RDHHDG Y
Sbjct: 1   MAISKAFSLSFLLLLGFGLASAARTLLGHEPDAYNPYDR--------RVGYDRDHHDGAY 60

Query: 61  GGGAGGGYGGGADSSLGGSGYGS--GGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLG 120
           GGG+GGGYG GA SSLGGSGYGS  GGGGGSGY G GDHG  YGSGGGGGYG G+GS LG
Sbjct: 61  GGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLG 120

Query: 121 GSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGA 180
           G+GYGSGGGGGSGGGYGD GG GKGYGSGGGGGSGYGG GDHGAGYGSGGGGGYGSG G 
Sbjct: 121 GAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGG 180

Query: 181 GS-YGPGGEHGVGYGSGGGGGSGSGYGGSK-GYGGGSGG--GGGAGYG-GGAHGSGYGSG 240
           G+ YGP GEHGVGYGSGGGGGSG GYGGSK GYGGGSGG  GGG GYG GGAHG GYG G
Sbjct: 181 GAGYGP-GEHGVGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGG 240

Query: 241 GGAGSGYGGSGEEGGYDGGY 254
           GG+G GYG SGEEGGYDGGY
Sbjct: 241 GGSGGGYGSSGEEGGYDGGY 251

BLAST of Clc10G01690 vs. ExPASy TrEMBL
Match: A0A6J1E911 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431731 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 198/282 (70.21%), Postives = 208/282 (73.76%), Query Frame = 0

Query: 1   MAIFRTLFFGFLLLVGLGVASAVRTLLSYDPPHLSRYDNYDHPIHNPKVGYERDHHDGP- 60
           MAI ++L   FLLL+GLG+ASA RTLLSYDPPH S    Y +  HNP+VGY+ DHHDGP 
Sbjct: 1   MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDV-GYGYQ-HNPRVGYDHDHHDGPY 60

Query: 61  --YGGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGD--------------------- 120
             YGGG+GGGYG GA SSLGGSGYGSGGGGGSGYAGVGD                     
Sbjct: 61  GAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120

Query: 121 --HGASYGSGGGGGYGAGVGSDLG--GSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGS 180
             HG  YGSGGGGG G G G DLG  G GYGSGGGGGSG GYGDLGGHGKGYGSGGGGGS
Sbjct: 121 GGHGKGYGSGGGGGSGVGYG-DLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGS 180

Query: 181 GYGGRGDHGAGYGSGGGGGYGSGVGAGSYGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGG 240
           GYGG  DHG GYGSGGGGGYG+G GAG YGPGG+HGVGYGSGGGGGSG GY         
Sbjct: 181 GYGGGADHGVGYGSGGGGGYGAGGGAG-YGPGGDHGVGYGSGGGGGSGGGY--------- 240

Query: 241 SGGGGGAGYGGGAHGSGYGSGGGAGSGYGG-SGEEGGYDGGY 254
             GGG  GYGGGA GSGYGSGGGAGSGYGG  GEEGGYDGGY
Sbjct: 241 --GGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 267

BLAST of Clc10G01690 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05
Identity = 114/196 (58.16%), Postives = 120/196 (61.22%), Query Frame = 0

Query: 61  GGGAGGGYGGGADSSLGGSGYGSGGGGGSGYAGVGDHGASYGSGGGGGYGAGVGSDLGGS 120
           G G GGGYGG A    GG G GSGGGGGS Y   G+H + YG+G G G GAG  S  GG 
Sbjct: 105 GEGGGGGYGGAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAGEGGGAG-ASGYGGG 164

Query: 121 GYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGAGYGSGGGGGYGSGVGAGS 180
            YG GGG G GGG G  GG   G G GGG G G GG G HG   G GGGGG GSG G G+
Sbjct: 165 AYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSG-GGGA 224

Query: 181 YGPGGEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGG-GGAGYGGGAHGSGYGSGGGAGSG 240
           YG GG HG GYGSGGG G G G G + GYGGG GGG GG G  GG HG G G G G G G
Sbjct: 225 YGGGGAHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSGGGHGGGGG 284

Query: 241 YGGSGEEGGYDGGYAP 256
           +GG        GGYAP
Sbjct: 285 HGG--------GGYAP 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038905926.11.6e-8491.80glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
XP_038903617.12.8e-8189.45glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
XP_011650342.12.9e-7082.09glycine-rich cell wall structural protein 2 [Cucumis sativus][more]
BAA34064.16.4e-7081.72glycine-rich protein-2, partial [Cucumis sativus][more]
XP_008448673.11.1e-6982.22PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L1U71.4e-7082.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1[more]
Q9ZWM23.1e-7081.72Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
A0A1S3BJM75.3e-7082.22glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1CWP31.3e-5575.77glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara... [more]
A0A6J1E9111.1e-5170.21glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662... [more]
Match NameE-valueIdentityDescription
AT5G46730.12.7e-0558.16glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 4..20
score: 29.41
coord: 163..181
score: 40.79
coord: 95..110
score: 39.06
coord: 122..132
score: 51.14
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc10G01690.1Clc10G01690.1mRNA