Clc10G00440 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G00440
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ganglioside-induced differentiation-associated protein 2
Location	ClcChr10: 488982 .. 492568 (-)
RNA-Seq Expression	Clc10G00440
Synteny	Clc10G00440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAAAGCAAGAAGAATTGATGAGGGGTGAGAGAGGTTAGATCTGGGGAGGGGAAGATGCTACAGAATATTCCCGTGTGACAAAAATGTTTGCCCCCACATCCGCTCCATTCTCCTCCTCCGCCCAATCATCTCCGTTTCCTTTCTCATCTTATTTTTGAAATCTCATCTCTCAAATTCCATCCTCCCCCAAATCCCTTCCATCCATCCTTATCCATATCCATATGCCCATCATATTTTGCCCTAACTATGCTCTGATTCAGTGTTTCCTTTCCGTACTTCTTCCACTATGGCCGCTCACCTTCAACCTCCTCCGCCGGAACAAAACCATCTCGAAAAACTCGACGTCTTCAAGATCAAAGGCAGAGACAAACAAGGCCGCCGCATTCTCCGCATCACCGGAAAGTTCTTTCCAGGTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTACCATTGAGTTTGAGTTTGAGTTTGCTCAAGAAACATCTGCATATTTGCGTTTCTATGTTCTGATAGATACTGTATTCTTCCTCTTTTCGTCGCGATGAAATTGATTTTCTATCGCCATCATCCGCGCAGGCTGTGAATTTGAATGCGCTCAAGAAGTATCTGCATATTTGCCCTAATCTGTTATGATTTGATTTTCTTGCTCTGCTTTGCTTCGATTTACTTGTTCTTTTTCATCATTTGAATTTTCGTAGAGAAGTATGCTCTGATTCTGTTTTCTTGCTCTTTTCGATCGAATTGAATCTTCGTCGGGAAGCATCTGTGTGGATTACCGTTACTATGCACTGATTATATTTTAATTTCTTGCTATTTTCATGAGAGGAATTGAAATTGAGTTTGGACTGTGCTTAAGAAGTATCTGCATATTTGAACTGACTGCTATGCTCCGATTCTAATTTCTTGCGGTTTTAAGCGATGAGTTTGATTTTTCCTTATCTGTTTTGAAAATCAGCGCGGAATGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTATACTTTCATACCGGCGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTTCGATCAATCTATGACGCAATTCCGTCCGCCGTCAAGGCTAATCTCGAAGCCGTGTATTTCGTTCACCCTGACCTCCAGGCCAGACTCTTCCTCGCAACTCTCGGCCGCATCTTCTTCACTAGCGAGTACTATTTTCTAACCTTTCTCCTTCTATCAATTCACTTTTTCCCTATATTCTTCTCAATATTCTTGAATATAGTAATAATTTTATATTTTTTTCTAACCTATAAAATAATGAAATCTTTTTTAATGTTAAATTGCAAAATTAGAGAAAGTTGGAATTTATTATAATGAAAATTTAGTCCCCGGGTTTGAGAAAACTTTCTTAGAGAGTCTTTATGGTATAAACTATTTATAAAGTTTTATCAAACCATAAGTACTATTTATAAAATTTTATCCAACCATAAGGATTATTAATGAGGTTTTATCAAACCATAAAAACTATTTATGAAATTCTAACTTTTTCCAAATCATGGAACCAAATTAGCAATTTAACCTTTTTCAATATGTAAATTAAATGTTAAATTGTAAATTTAGTTCTTATAATTTGAAGAAAAGTTAGACTTTAGTCTGATCCCTATAATTTTAAAAGTTCAAATTTAGTTTTTATGATTTGATATAGTATATAGTATGTTATGAATATAGTTTTACTTTTATATACTTTAGCAAGTACTATTGACTATTTAGGAATATTTTATCAAATCATATGTTCTAACTTTGTCTGGACTAAATTTACCATTTAATCTAAATTATAACATTTGATAAATTTTTTTTTCGAAATTTGAAAAGAATCTGATTCTTTATTATAGAAACACTTCTCTTGATTGGATGTACTTTTTCTTTTTGTAAAAAAATATTTTTTTGTAATTTTTATGTCCGCATCTTAATTAATCAGGACCAATAATTCTCTTCTTATTTTACTATTTTTCAGAATAATAGTATGAAATTATAAATTTAGTCATCTGATAGATTTCACATAAGTTGAAAATTTATTAAATGTTTGAATGAAAAGTTGAAAATGTATTAAATACTTTAAGGCGTATTAAAGTAAAATAAAACTTAAAAGATTTAGGAAGTAAACCTGTAATTTAATTAGTTACTTTAAACTTTTAAGGCCTAACGTTATTTATTAATCAAAAGAAATTAACATTAATAAAGTGATAATGGTAGAAATTAGAAGTATTGGAAGTAATGGAATGAGATTGACATAAAGAAACTTATTAATGAAGGGGGGAATGTTTGAATGTGGTAGGGTATATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTTGAGAGTGATCATCCTAGGGTCTACGGTGCACCCTCAGTGGAATCGCACGTGTACTCCATGAGGTGTATTTCATAAAATCTATTTTTTTCCCCTGAAAATGGCCGTGTTTAAGTGAGTTTGAGTTTGGGTCTTGTTTGGCCTACTAACTCTTTTTTTCTCTTTGGAACCCAAGACCAAGAAGTGCTTGTATATATTTGTTTTTTGCCCTTTTCTTTTTTTCTTTTTTGGGGAAAAAGTGGTTGTATAAAACAAAGCTATTGGTATGCGTAACTGTATATATGCCTTTTAATGATGCATAGTTTTAATTTTCAATTACCTTTTTCGTCCCTTAATTTTTAGCATTAGGTGTTCTTGGTCCTTAAGTTTTTGAACGGTATCATTTTAGTCCCTCAATTTTTTAGAATAGGTTCCTCAATACTAACACACCCTTAAATGCAAATGAAAATCTGACTGGACATCCACATGGCTGCTGACTAGACTTTAAAATTTGTCCTAGACTTATGTTGTAAGAAAATTAAGAAAATGAAACCCTAGAATCCATTAAACCCCACCTAATGTATTTTCTCAAATTGCAACCTTCAGCCTCTTCCCCCCTGTAAAAATCAATCGATAGTCCTCTTGGTCTTCATCACCGGTCATTTCAGTGGGCGAATTTCGCATCTTCCTCCGACAAGTATTTGATTCACGAGGACGAAGCTTCATCTTCATTGGTTAAGTACAAATTAATCCCACTTCCTTTGCCGATGGCTTTTCCCATGAGATGATTGAGGAGGGAACAACTTCATCAGTGAAACTAGAATGAAAATTAATTGTGATCTAAAACATCCTTTTGGAGGGTACTTCCTTTGGGGCTGATGATTCTATTTCAACTGGGAGTTCTGATTGAGCGGCTTTATCACCGGTGCATTCCGACTACAAATCCACCATGGCGGAAAGATGGCGAATTCCGATTCAGCAGCTTAATAATGAAGTAAAACCTGCAAAGGTGCTTCCATTGCAGTTTGATTATTTTCATGTAGTGTTGCAGAAGCACAATTTGGTTGCAATTTAATATCTATTTCAACAATAACAAGTGTTGGTTTGGGG

mRNA sequence

ATTTAAAGCAAGAAGAATTGATGAGGGGTGAGAGAGGTTAGATCTGGGGAGGGGAAGATGCTACAGAATATTCCCGTGTGACAAAAATGTTTGCCCCCACATCCGCTCCATTCTCCTCCTCCGCCCAATCATCTCCGTTTCCTTTCTCATCTTATTTTTGAAATCTCATCTCTCAAATTCCATCCTCCCCCAAATCCCTTCCATCCATCCTTATCCATATCCATATGCCCATCATATTTTGCCCTAACTATGCTCTGATTCAGTGTTTCCTTTCCGTACTTCTTCCACTATGGCCGCTCACCTTCAACCTCCTCCGCCGGAACAAAACCATCTCGAAAAACTCGACGTCTTCAAGATCAAAGGCAGAGACAAACAAGGCCGCCGCATTCTCCGCATCACCGGAAAGTTCTTTCCAGATACTGTATTCTTCCTCTTTTCGTCGCGATGAAATTGATTTTCTATCGCCATCATCCGCGCAGGCTGTGAATTTGAATGCGCTCAAGAAAGGAATTGAAATTGAGTTTGGACTGTGCTTAAGAACGCGGAATGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTATACTTTCATACCGGCGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTTCGATCAATCTATGACGCAATTCCGTCCGCCGTCAAGGCTAATCTCGAAGCCGTGTATTTCGTTCACCCTGACCTCCAGGCCAGACTCTTCCTCGCAACTCTCGGCCGCATCTTCTTCACTAGCGAGGTATATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTTGAGAGTGATCATCCTAGGGTCTACGGTGCACCCTCAGTGGAATCGCACGTGTACTCCATGAGGTGTATTTCATAAAATCTATTTTTTTCCCCTGAAAATGGCCGTGTTTAAGTGAGTTTGAGTTTGGGTCTTGTTTGGCCTACTAACTCTTTTTTTCTCTTTGGAACCCAAGACCAAGAAGTGCTTGTATATATTTGTTTTTTGCCCTTTTCTTTTTTTCTTTTTTGGGGAAAAAGTGGTTGTATAAAACAAAGCTATTGGTATGCGTAACTGTATATATGCCTTTTAATGATGCATAGTTTTAATTTTCAATTACCTTTTTCGTCCCTTAATTTTTAGCATTAGGTGTTCTTGGTCCTTAAGTTTTTGAACGGTATCATTTTAGTCCCTCAATTTTTTAGAATAGGTTCCTCAATACTAACACACCCTTAAATGCAAATGAAAATCTGACTGGACATCCACATGGCTGCTGACTAGACTTTAAAATTTGTCCTAGACTTATGTTGTAAGAAAATTAAGAAAATGAAACCCTAGAATCCATTAAACCCCACCTAATGTATTTTCTCAAATTGCAACCTTCAGCCTCTTCCCCCCTGTAAAAATCAATCGATAGTCCTCTTGGTCTTCATCACCGGTCATTTCAGTGGGCGAATTTCGCATCTTCCTCCGACAAGTATTTGATTCACGAGGACGAAGCTTCATCTTCATTGGTTAAGTACAAATTAATCCCACTTCCTTTGCCGATGGCTTTTCCCATGAGATGATTGAGGAGGGAACAACTTCATCAGTGAAACTAGAATGAAAATTAATTGTGATCTAAAACATCCTTTTGGAGGGTACTTCCTTTGGGGCTGATGATTCTATTTCAACTGGGAGTTCTGATTGAGCGGCTTTATCACCGGTGCATTCCGACTACAAATCCACCATGGCGGAAAGATGGCGAATTCCGATTCAGCAGCTTAATAATGAAGTAAAACCTGCAAAGGTGCTTCCATTGCAGTTTGATTATTTTCATGTAGTGTTGCAGAAGCACAATTTGGTTGCAATTTAATATCTATTTCAACAATAACAAGTGTTGGTTTGGGG

Coding sequence (CDS)

ATGCCCATCATATTTTGCCCTAACTATGCTCTGATTCAGTGTTTCCTTTCCGTACTTCTTCCACTATGGCCGCTCACCTTCAACCTCCTCCGCCGGAACAAAACCATCTCGAAAAACTCGACGTCTTCAAGATCAAAGGCAGAGACAAACAAGGCCGCCGCATTCTCCGCATCACCGGAAAGTTCTTTCCAGATACTGTATTCTTCCTCTTTTCGTCGCGATGAAATTGATTTTCTATCGCCATCATCCGCGCAGGCTGTGAATTTGAATGCGCTCAAGAAAGGAATTGAAATTGAGTTTGGACTGTGCTTAAGAACGCGGAATGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTATACTTTCATACCGGCGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTTCGATCAATCTATGACGCAATTCCGTCCGCCGTCAAGGCTAATCTCGAAGCCGTGTATTTCGTTCACCCTGACCTCCAGGCCAGACTCTTCCTCGCAACTCTCGGCCGCATCTTCTTCACTAGCGAGGTATATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTTGAGAGTGATCATCCTAGGGTCTACGGTGCACCCTCAGTGGAATCGCACGTGTACTCCATGAGGTGTATTTCATAA

Protein sequence

MPIIFCPNYALIQCFLSVLLPLWPLTFNLLRRNKTISKNSTSSRSKAETNKAAAFSASPESSFQILYSSSFRRDEIDFLSPSSAQAVNLNALKKGIEIEFGLCLRTRNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS

Homology

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BLAST of Clc10G00440 vs. NCBI nr
Match: KAA0052930.1 (ganglioside-induced differentiation-associated protein 2 [Cucumis melo var. makuwa] >TYK11387.1 ganglioside-induced differentiation-associated protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-83
Identity = 168/210 (80.00%), Postives = 172/210 (81.90%), Query Frame = 0


Query: 55  FSASPESSFQILYSSSFRRDEIDFLSPSSAQAVNLNALKKGIEIEFGLCLRTRNVSLDVL 114
           FSA       +L+S SFRRD+I F                            R VSLDVL
Sbjct: 53  FSAYFPFYVPLLFSCSFRRDQIKFYR------------------------YARVVSLDVL 112

Query: 115 KKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVH 174
           KKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIP+AVKANLEAVYFVH
Sbjct: 113 KKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVH 172

Query: 175 PDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRP 234
           PDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRP
Sbjct: 173 PDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRP 232

Query: 235 MMDYGLESDHPRVYGAPSVESHVYSMRCIS 265
           MMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 233 MMDYGLESDHPRVYGAPSVESHVYSMRCIS 238

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BLAST of Clc10G00440 vs. NCBI nr
Match: XP_004146166.1 (ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN55625.1 hypothetical protein Csa_010698 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 5.3e-83
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 107 RNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKAN 166
           R VSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIP+AVKAN
Sbjct: 44  RVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKAN 103

Query: 167 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 226
           LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH
Sbjct: 104 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 163

Query: 227 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 265
           DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 164 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 201

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BLAST of Clc10G00440 vs. NCBI nr
Match: XP_038905989.1 (ganglioside-induced differentiation-associated protein 2 [Benincasa hispida])

HSP 1 Score: 318.5 bits (815), Expect = 5.3e-83
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 107 RNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKAN 166
           R VSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIP+AVKAN
Sbjct: 47  RIVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKAN 106

Query: 167 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 226
           LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH
Sbjct: 107 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 166

Query: 227 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 265
           DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 167 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 204

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BLAST of Clc10G00440 vs. NCBI nr
Match: XP_008448498.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-82
Identity = 155/158 (98.10%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 107 RNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKAN 166
           R VSLDVLKKHLEEKIFPRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIP+AVKAN
Sbjct: 44  RVVSLDVLKKHLEEKIFPRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKAN 103

Query: 167 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 226
           LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH
Sbjct: 104 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 163

Query: 227 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 265
           DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 164 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 201

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BLAST of Clc10G00440 vs. NCBI nr
Match: XP_022923521.1 (ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschata] >XP_023007626.1 ganglioside-induced differentiation-associated protein 2-like [Cucurbita maxima] >KAG6577807.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015847.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 4.2e-80
Identity = 156/192 (81.25%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 81  PSSAQAVNLNALK-KGIEIEFGLCLR-------TRNVSLDVLKKHLEEKIFPRLKNKRFT 140
           P   Q  NL+  K KG + +    LR        R VSLDV+KKHLEEKIFPRLKNKRFT
Sbjct: 10  PEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFT 69

Query: 141 ILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVHPDLQARLFLATLGRIFFT 200
           ILYFHT VQRSQNFPGIAALRSIY+AIP+ VKANLEAVYFVHPDLQARLFLATLGRIFFT
Sbjct: 70  ILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFT 129

Query: 201 SEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 260
           SE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS
Sbjct: 130 SEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 189

Query: 261 VESHVYSMRCIS 265
           ++SHVYSMRCIS
Sbjct: 190 IDSHVYSMRCIS 201

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BLAST of Clc10G00440 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.9e-09
Identity = 28/106 (26.42%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 122 IFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVHPDLQARL 181
           +  R+ N+ + ++YFHT     +N P ++ L+ +Y  + +  + NL+A Y VHP + AR+
Sbjct: 379 VLDRIVNRDYVVVYFHTH-STEENQPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARI 438

Query: 182 FLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHD 228
            +      F  S V  KV ++S +  L++ +  +++++P ++ ++D
Sbjct: 439 -VTWFFTTFTASSVKEKVHFLSGVQYLYDWINPDQLDIPAYVLEYD 482

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BLAST of Clc10G00440 vs. ExPASy Swiss-Prot
Match: Q0IHU9 (Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05
Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 131 FTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVHPDLQARLFLATLGRIF 190
           + ++Y + G    +  PG+  ++  Y  I   ++ NL++   VHP    R  LA L R F
Sbjct: 187 YMVVYLN-GATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-LTRPF 246

Query: 191 FTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDL 231
            +S+   K++YVS +  L E +    + +PE I   DE+L
Sbjct: 247 ISSKFSSKIKYVSTLAELSELIPMEYVHIPETIVKLDEEL 284

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BLAST of Clc10G00440 vs. ExPASy TrEMBL
Match: A0A5A7UCK6 (Ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00390 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 5.1e-84
Identity = 168/210 (80.00%), Postives = 172/210 (81.90%), Query Frame = 0


Query: 55  FSASPESSFQILYSSSFRRDEIDFLSPSSAQAVNLNALKKGIEIEFGLCLRTRNVSLDVL 114
           FSA       +L+S SFRRD+I F                            R VSLDVL
Sbjct: 53  FSAYFPFYVPLLFSCSFRRDQIKFYR------------------------YARVVSLDVL 112

Query: 115 KKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVH 174
           KKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIP+AVKANLEAVYFVH
Sbjct: 113 KKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVH 172

Query: 175 PDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRP 234
           PDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRP
Sbjct: 173 PDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRP 232

Query: 235 MMDYGLESDHPRVYGAPSVESHVYSMRCIS 265
           MMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 233 MMDYGLESDHPRVYGAPSVESHVYSMRCIS 238

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BLAST of Clc10G00440 vs. ExPASy TrEMBL
Match: A0A0A0L0Z7 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.5e-83
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 107 RNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKAN 166
           R VSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIP+AVKAN
Sbjct: 44  RVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKAN 103

Query: 167 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 226
           LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH
Sbjct: 104 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 163

Query: 227 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 265
           DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 164 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Clc10G00440 vs. ExPASy TrEMBL
Match: A0A1S3BJ81 (ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103490659 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.4e-83
Identity = 155/158 (98.10%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 107 RNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKAN 166
           R VSLDVLKKHLEEKIFPRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIP+AVKAN
Sbjct: 44  RVVSLDVLKKHLEEKIFPRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKAN 103

Query: 167 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 226
           LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH
Sbjct: 104 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 163

Query: 227 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 265
           DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 164 DEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 201

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BLAST of Clc10G00440 vs. ExPASy TrEMBL
Match: A0A6J1L134 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500201 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.0e-80
Identity = 156/192 (81.25%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 81  PSSAQAVNLNALK-KGIEIEFGLCLR-------TRNVSLDVLKKHLEEKIFPRLKNKRFT 140
           P   Q  NL+  K KG + +    LR        R VSLDV+KKHLEEKIFPRLKNKRFT
Sbjct: 10  PEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFT 69

Query: 141 ILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVHPDLQARLFLATLGRIFFT 200
           ILYFHT VQRSQNFPGIAALRSIY+AIP+ VKANLEAVYFVHPDLQARLFLATLGRIFFT
Sbjct: 70  ILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFT 129

Query: 201 SEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 260
           SE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS
Sbjct: 130 SEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 189

Query: 261 VESHVYSMRCIS 265
           ++SHVYSMRCIS
Sbjct: 190 IDSHVYSMRCIS 201

[Close]

BLAST of Clc10G00440 vs. ExPASy TrEMBL
Match: A0A6J1E710 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431194 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.0e-80
Identity = 156/192 (81.25%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 81  PSSAQAVNLNALK-KGIEIEFGLCLR-------TRNVSLDVLKKHLEEKIFPRLKNKRFT 140
           P   Q  NL+  K KG + +    LR        R VSLDV+KKHLEEKIFPRLKNKRFT
Sbjct: 10  PEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFT 69

Query: 141 ILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKANLEAVYFVHPDLQARLFLATLGRIFFT 200
           ILYFHT VQRSQNFPGIAALRSIY+AIP+ VKANLEAVYFVHPDLQARLFLATLGRIFFT
Sbjct: 70  ILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFLATLGRIFFT 129

Query: 201 SEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 260
           SE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS
Sbjct: 130 SEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 189

Query: 261 VESHVYSMRCIS 265
           ++SHVYSMRCIS
Sbjct: 190 IDSHVYSMRCIS 201

[Close]

BLAST of Clc10G00440 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 238.4 bits (607), Expect = 6.5e-63
Identity = 113/160 (70.62%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 107 RNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKAN 166
           R +SLDVLKK+LEEKIFPRL  K F +LY HTGVQRS+NFPGI+ALR+IYDAIP  V+ N
Sbjct: 43  RFLSLDVLKKYLEEKIFPRLGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDN 102

Query: 167 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 226
           L+ VYF+HP LQ+RLFLAT GR  F+  +YGK+RY+SR+D LWEHVRRNEIE+PEF+YDH
Sbjct: 103 LQEVYFLHPGLQSRLFLATCGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDH 162

Query: 227 DEDLEYRPMMDYGLESDHPRVYGAPSVESHV--YSMRCIS 265
           D+DLEYRPMMDYG ESDH RV+   +V+S V  +SMRCIS
Sbjct: 163 DDDLEYRPMMDYGQESDHARVFAGAAVDSSVSSFSMRCIS 202

[Close]

BLAST of Clc10G00440 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-33
Identity = 61/137 (44.53%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 107 RNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSAVKAN 166
           R VS + LKK++ +KI  +       ++Y H+ VQ+  N PGI  LR IY+ +PS +K  
Sbjct: 78  RVVSAERLKKYISQKISNQCPEGPLCLVYMHSTVQKDDNSPGITILRWIYEDLPSDIKDR 137

Query: 167 LEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDH 226
           L+ VYF+HP L++RL +ATLGR+  +  +Y K++YVSR+  LWE +++ E+E+P+F+ +H
Sbjct: 138 LQLVYFIHPGLRSRLVIATLGRLLLSGGLYWKIKYVSRLQYLWEDIKKGEVEIPDFVKNH 197

Query: 227 DEDLEYRPMMDYGLESD 244
           D  LE+RP+ DYG+E D
Sbjct: 198 DNVLEHRPLTDYGIEPD 214

[Close]

BLAST of Clc10G00440 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-08
Identity = 33/125 (26.40%), Postives = 65/125 (52.00%), Query Frame = 0


Query: 103 CLRTRNVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPSA 162
           CL      L V+K+      F  +  K ++I+YFH+     Q  P +  ++ +   +   
Sbjct: 424 CLDLERFVLYVIKE------FEPVIQKPYSIVYFHSAAS-LQVQPDLGWMKRLEQILGRK 483

Query: 163 VKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEF 222
            + NL+A+Y +HP    +  + T+ + F  + V+ KV Y  R+  L+++V R ++ +P+F
Sbjct: 484 HQRNLQAIYVLHPTFHLKATILTM-QFFVDNVVWKKVVYADRLLQLFKYVPREQLTIPDF 540

Query: 223 IYDHD 228
           ++ HD
Sbjct: 544 VFQHD 540

The following BLAST results are available for this feature:

BLAST of Clc10G00440 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052930.1	1.1e-83	80.00	ganglioside-induced differentiation-associated protein 2 [Cucumis melo var. maku...	[more]
XP_004146166.1	5.3e-83	98.73	ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN5...	[more]
XP_038905989.1	5.3e-83	98.73	ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]	[more]
XP_008448498.1	1.5e-82	98.10	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis mel...	[more]
XP_022923521.1	4.2e-80	81.25	ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschat...	[more]

BLAST of Clc10G00440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7T167	8.9e-09	26.42	Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1	[more]
Q0IHU9	3.5e-05	30.00	Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1	[more]

BLAST of Clc10G00440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UCK6	5.1e-84	80.00	Ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo var. ma...	[more]
A0A0A0L0Z7	2.5e-83	98.73	CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 P...	[more]
A0A1S3BJ81	7.4e-83	98.10	ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656...	[more]
A0A6J1L134	2.0e-80	81.25	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxim...	[more]
A0A6J1E710	2.0e-80	81.25	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita mosch...	[more]

BLAST of Clc10G00440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35750.1	6.5e-63	70.63	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT3G10210.1	4.1e-33	44.53	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT1G69340.1	2.7e-08	26.40	appr-1-p processing enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	SMART	SM00516	sec14_4	coord: 80..226 e-value: 0.0091 score: 24.0
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 108..229 e-value: 1.8E-27 score: 96.3
IPR001251	CRAL-TRIO lipid binding domain	CDD	cd00170	SEC14	coord: 98..220 e-value: 1.09293E-7 score: 48.1502
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 101..231 e-value: 1.2E-20 score: 75.6
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 103..264
None	No IPR available	PANTHER	PTHR11106:SF103	OS04G0561200 PROTEIN	coord: 103..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G00440.2	Clc10G00440.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane