Clc10G00300 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G00300
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	ClcChr10: 362397 .. 366441 (-)
RNA-Seq Expression	Clc10G00300
Synteny	Clc10G00300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCGGAATTCCGATCCCAACTTCTTCCTGAATAACCTCCGTCGTATTGCGACGACCGAACGGAGTCTTTTGGTTTGATTAAATTCACAGTGGTGGCAGAAAAATCCTCCGGAAATGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCAATTGCCGCTCCATTCATATTTTTTATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGTTCGCTTTTTCGCTTGATTTTTTTTTTCCGTCCGAATTCTTGTCGTGTTTGTATTTTTTATCATTCTGCTTGCTTTTCAACCCTAAACTTGTTATTGATATTGAATTTTGAGGTATACCTCAAATTCAGGGCTGTAGCGCGTTTCAGTTTTTTCGTTGACAGACTTGAGAATGCAATATGCCCAACTCTGCTTCGTGAAGTTCACGATATTGGATTGAACACATTGTGATTTGATCAGTTTAGCGACGTGATGAATTCAATGTGGAGATCTATTGGCATTTTCAGTCTTGATATCGAAGAATTTTCTATGTTATAATTGTTATCCGTTCAATCTTGTCAACTTGTTTCTTTTGACAATCGTGTTTCGATCATGCATGTACGTTTCAGGTAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAGTAAGTAGTATTTTCCAGCTCGATTCACCATTAGGCAGTGCCTAATTCGGCTCAAATCACTCATTCAGTAAGATTGTTTGTAACTGGTATGAATGTCATGGGGGTCATATTTATTTGCTTTTACGTTCGTGTAGACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTGAGGCTAATTAATTCATCCCTTGATATCTCATATCTTCCCTCAATATTTTTTTTTTCTCTTTAAATAATGAGTTTCTGAAAGAACATTGTGAAATGCTTTATACCACTTCTCATCATTAACGGGTAGGGGAATAAGTTTGCTATTGTAATGGTAAGGTTTTTTAAAAAAATCATCGTTGCATGAGCAGTTTTGAGGATGCTGCTTGGACTATTGACTGCTATGTGATATAGGAATCTCAGGATTAGAAGCTGGAGCAACCACTTAGCTACTGACCGTTAGCAAAGAATGCTTCTCAAATTTAACCAAAAGAAAAAACGGCTTATAGACTCCAAACTAACAGTTAACGGGTGTCTGTGCTGGTAAATGTTATTGCCACTCCATCCAATGGATCTAGTTACTTATAGATACAAATTCATCCAACATCGTGCTCATACTGCCAATCATGATTTCATATATGGATTATGGTTAACCGTTCGAGCCCTTGAACAACCTCTTATCTATAATATGCTTCTGTGTTGGAGGGAACAAAAGACTATATCATAGCAAGTTGCAAGCAACTTCTCATTGGAAAAATTGGTCTTACTCTAGAAACATGGTAGATGTAAGCCATTAGCACATTCAATTTGGAGAAGTTGATTTGGTCTTTGTAAAGTATTGAAAGCACTCCATGCTTGAAGTGTTAGCATCCAACTAATATAGGAAATTAACGTAGCTTAACTCATGTAGTGGCACCCTTTTCTTATACAAGACCATGTTTTTTTCCTTGTAGAATGGGGGATCAAACATCTGACCTTGAGATCAATAATCAATAGTACAAGCTTTATACCAGTTTTCACTCAAATCTAATATCACCCAAAATTGTACCTGAAATGTTTTGTACGTCATAGTTATAGTTATAGTTTTTAACTGGCATATTTTCATGTTTGTGTATCTATTTTTTTGGGTTCATTAAATCACATTTTACATTTAGCCTGTGTTAAAATGTCAATTTTACAGTTGCTTGTGAAGCGCTGATATATCTTTACCAAGGTTATCCATTTTCAATAATTCGTTTCAAGTTATCCAATTAGCAAGAGTAATTCTTATGCTGTCTACATTCAAAATGCATCTTGAAGTCAAGCTAAAATATAGGAGCAGTAAAATAGCCGTATTTATCATCATAACGTAGCCTCGACTTCTGTTCATCTTATTTCAGCTGTTTTCTCCCATTGATTGCTTTCCTTCCCTTGTGTACTGCTTAATAAGATGCTTCAGATTACACTTTCAATTCAATTTGAATGACATTGCTGCCAGATCAAGAATCACGTAATAAGGAGATGAAGACATCCTATGGTTTATATGGCCGAGTACTGTTGATATCAAAGGTGATTTTATTGTACTAAATGTTCTGAGAAATGTGTTTATATGTTGGCAGTTTTTAAAAAATTTTCTTTATCTTGTGGTCGTGTAGGTTTTTATATATATTGTGCTGGTTTGCTGGTTTTGGAGGGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGTAATCACTTTCATCGCCAACATAATTTCTGAAGAACAATTAAATAGCTATGTCATTTCATTTAGAATTCAAAATATCATAGTGTCTTTATGCTCCCCCTTGTACAGGAAAATTTTTGTCTTGGAGGGCTGGAGGTACCGCAAATGATTATGTGAAGGTAGAATAGTAGTCACTTCTCAATTATCCGCAAATAAATAACCTCTTGGATCACAGTGCATTTATTTTATCCCTTAAGCATAACATACCACCACTTCCACTCAAAAAATGATATTTATACATGGTCAGCAACCCTTGTATATGATAGGATAGAATTCGGAATATGCTTAGGGTATATTGAGGATACAGTAGTGACTTATGTTTGGCGTGGAATGGTGACTGTTATGTTTTGATTGAGGAGGTGCTCTTACGTTCGCCTTTTTGGAAGAGAGGCAAAGTTTTGTGGCACACTAGTTTCTTTGATAGCTTGTGGTGTCTAATTTGAGAGAAATAATAGGATTTTTTTAGAGGCATAGTCTGTGTGTGGGAGGTGCTGAGGTTTAACACCTCATCGAGGGCATTGATCACTATACCTTTTGTAATTATAATCTTTTTTTTTAATATTCGTGAGTGTCTGGGCCAGCTTACGTGCATTTCGACTAATCTCATGGGACAACTCGCATGACTCTACAACATTTGGGTGTCAAAGAAACTCATAGTATATTAAATCCTAGGTAGGTGGCCTCTTAGCCATTTATTGAGACTATGTCTCCTTTTCTACCATGTTGTAGTTATGATATTGGTTTTTTTTTTTTTTTTTTTTTGCATTGGAGGCCCTTTTTGTAGGTTTTCTTGGGTTTTCTTTTTTAAATAATTATTGGGGCTTGTTTTTCTCACCGAAATCTTGGTTTCTTACCCAAAGAATAAAAAGTATAGCAGTGTATTTGAGGCGACCCAAGGCGCACGCCTAAGGCGAGAGTGAGTGGAAAAAGTTAAAAGGTAGGCAATTTTTTTTTTTTGTAGGATTAGGGCTTGAGTTGGTATATACTAATAAGCGAGGGAAGATTCAGAACCTCAAATACTAGAGGTTGTTATCTTATATTAGCATGCTACTGATAATAACATGAAATGTCTATCCATCGCTACAATTGTACGTGCACAAATGAAAATGAGAATATGGTGATTCTTAGTTATTTTCTAATGATGAACTGCAGGTCGGAATTATACCTTGGTTGATTCTGTCGACAAGGGTTAGCAAGTTTGTATGTCAAGTCGCAAAGTAAAGACGTGATTGAAGGTAATTGTGATGTAGAATGATACATCGCCACATGCTATGTACAATATTTGGCAATCGATATTTTGCTAAGTTTCAGGGGAGGCTGGAGAATTTTTCAGCCCCACCACTTTCTTCTTAAATTCATTCAAATGAGGTTCAGCTTTGTTGTTGTTTTCCTTTTCTTTTTCCCGCATATATTTTCCCTTTCATTCTTTGTTTCTTCCCCCCCCCCCCCCCCCCCCCCCCGGTTTGGGAACTCTTGGTCTTGTGTATCATTTATTATTGTTATCTTTATTATTTTTATATAGAATTAAGATACTCTATGTATAACATTGGTTGCCCGTGCGTAAGGTAAGGATG

mRNA sequence

CAGCGGAATTCCGATCCCAACTTCTTCCTGAATAACCTCCGTCGTATTGCGACGACCGAACGGAGTCTTTTGGTTTGATTAAATTCACAGTGGTGGCAGAAAAATCCTCCGGAAATGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCAATTGCCGCTCCATTCATATTTTTTATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGTATACCTCAAATTCAGGGCTGTAGCGCGTTTCAGTTTTTTCGTTGACAGACTTGAGAATGCAATATGCCCAACTCTGCTTCGTGAAGTAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATGAAGACATCCTATGGTTTATATGGCCGAGTACTGTTGATATCAAAGGTGATTTTATTGGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAATTTTTGTCTTGGAGGGCTGGAGGTACCGCAAATGATTATGTGAAGCATGCTACTGATAATAACATGAAATGTCTATCCATCGCTACAATTGTCGGAATTATACCTTGGTTGATTCTGTCGACAAGGGTTAGCAAGTTTGTATGTCAAGTCGCAAAGTAAAGACGTGATTGAAGGTAATTGTGATGTAGAATGATACATCGCCACATGCTATGTACAATATTTGGCAATCGATATTTTGCTAAGTTTCAGGGGAGGCTGGAGAATTTTTCAGCCCCACCACTTTCTTCTTAAATTCATTCAAATGAGGTTCAGCTTTGTTGTTGTTTTCCTTTTCTTTTTCCCGCATATATTTTCCCTTTCATTCTTTGTTTCTTCCCCCCCCCCCCCCCCCCCCCCCCGGTTTGGGAACTCTTGGTCTTGTGTATCATTTATTATTGTTATCTTTATTATTTTTATATAGAATTAAGATACTCTATGTATAACATTGGTTGCCCGTGCGTAAGGTAAGGATG

Coding sequence (CDS)

ATGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCAATTGCCGCTCCATTCATATTTTTTATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGTATACCTCAAATTCAGGGCTGTAGCGCGTTTCAGTTTTTTCGTTGACAGACTTGAGAATGCAATATGCCCAACTCTGCTTCGTGAAGTAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATGAAGACATCCTATGGTTTATATGGCCGAGTACTGTTGATATCAAAGGTGATTTTATTGGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAATTTTTGTCTTGGAGGGCTGGAGGTACCGCAAATGATTATGTGAAGCATGCTACTGATAATAACATGAAATGTCTATCCATCGCTACAATTGTCGGAATTATACCTTGGTTGATTCTGTCGACAAGGGTTAGCAAGTTTGTATGTCAAGTCGCAAAGTAA

Protein sequence

MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAICPTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEMKTSYGLYGRVLLISKVILLASVATVPHHLVQPFGKFLSWRAGGTANDYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK

Homology

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BLAST of Clc10G00300 vs. NCBI nr
Match: XP_008448478.1 (PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 2.3e-68
Identity = 157/221 (71.04%), Postives = 162/221 (73.30%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           MEAEGIVEH SSIAAPFIFFIVIGFQFLARWLEHLKK                       
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKK----------------------- 62

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GSNSQVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES
Sbjct: 63  ------GGSNSQVELELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 122

Query: 121 RNKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAN 180
           RNKE+KTSYGLY +VLLISKVI+          ASVATVPHHLVQPFGKFLSW+AGGT N
Sbjct: 123 RNKEIKTSYGLYSQVLLISKVIIYIVLVCWFWRASVATVPHHLVQPFGKFLSWKAGGTVN 179

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           DYVK               VGIIPWLILSTRVSKFVCQV K
Sbjct: 183 DYVK---------------VGIIPWLILSTRVSKFVCQVVK 179

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BLAST of Clc10G00300 vs. NCBI nr
Match: XP_004146176.1 (uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical protein Csa_010199 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-66
Identity = 154/221 (69.68%), Postives = 161/221 (72.85%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           ME EGIVEHRSSIAAPFIFFIVIGFQFLA+WLEHLKK                       
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKK----------------------- 60

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GSNSQVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQES
Sbjct: 61  ------RGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120

Query: 121 RNKEMKTSYGLYGRVLLISKVIL---------LASVATVPHHLVQPFGKFLSWRAGGTAN 180
           RNKE+KTSYGLY +VLL+SKVI+          ASVATVPHHLVQPFGKFLSWRAGGT N
Sbjct: 121 RNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVN 177

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           DYVK               VGIIPWLILSTRVSKFV +V K
Sbjct: 181 DYVK---------------VGIIPWLILSTRVSKFVFRVVK 177

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BLAST of Clc10G00300 vs. NCBI nr
Match: XP_023007643.1 (uncharacterized protein LOC111500212 [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-64
Identity = 150/220 (68.18%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 2   EAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAICP 61
           EAEGIVEHRSSIAAP IF IVI FQFLARWLEHLKK                        
Sbjct: 6   EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKK------------------------ 65

Query: 62  TLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 121
                 GSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR
Sbjct: 66  -----GGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 125

Query: 122 NKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAND 181
           NKE+KTSYGLY RVLLISKV +           SVATVPHHLVQPFG+ LSW+AGG  ND
Sbjct: 126 NKEIKTSYGLYSRVLLISKVFMYITLVFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVND 181

Query: 182 YVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           YVK               VGIIPWLILSTRVSKFVCQV +
Sbjct: 186 YVK---------------VGIIPWLILSTRVSKFVCQVVR 181

[Close]

BLAST of Clc10G00300 vs. NCBI nr
Match: XP_022923433.1 (uncharacterized protein LOC111431128 [Cucurbita moschata] >KAG6577814.1 Guided entry of tail-anchored proteins factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015853.1 Tail-anchored protein insertion receptor WRB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254.6 bits (649), Expect = 7.5e-64
Identity = 149/220 (67.73%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 2   EAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAICP 61
           EAEGIVEHRSSIAAP IF +VI FQFLARWLEHLKK                        
Sbjct: 4   EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKK------------------------ 63

Query: 62  TLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 121
                 GSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR
Sbjct: 64  -----GGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 123

Query: 122 NKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAND 181
           NKE+KTSYGLY RVLLISKV +           SVATVPHHLVQPFG+ LSW+AGG  ND
Sbjct: 124 NKEIKTSYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVND 179

Query: 182 YVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           YVK               VGIIPWLILSTRVSKFVCQV +
Sbjct: 184 YVK---------------VGIIPWLILSTRVSKFVCQVVR 179

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BLAST of Clc10G00300 vs. NCBI nr
Match: XP_038904813.1 (uncharacterized protein LOC120091071 [Benincasa hispida])

HSP 1 Score: 253.1 bits (645), Expect = 2.2e-63
Identity = 148/221 (66.97%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           MEAE I+E++SSIAAPFIF IVIGFQFLA+WLEHLKK                       
Sbjct: 1   MEAERIIENQSSIAAPFIFLIVIGFQFLAKWLEHLKK----------------------- 60

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GSNSQ+EMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES
Sbjct: 61  ------GGSNSQMEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120

Query: 121 RNKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAN 180
           RNK+MKTSYGLYGRVLLISKV +           SVATVP HLVQPFGKFLSWR GGT N
Sbjct: 121 RNKQMKTSYGLYGRVLLISKVFIYIILVCWFWRVSVATVPRHLVQPFGKFLSWRTGGTVN 177

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           D VK               VGI+PWLILSTRVSKFVC+V K
Sbjct: 181 DCVK---------------VGILPWLILSTRVSKFVCRVVK 177

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BLAST of Clc10G00300 vs. ExPASy Swiss-Prot
Match: Q1H5D2 (Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.8e-37
Identity = 98/218 (44.95%), Postives = 120/218 (55.05%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           ME E ++E R  +AAP  F +V+ FQ L++WL+ LKK                       
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKK----------------------- 60

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GS +  E ELR  IKQLLREAS LSQP+TFAQAAKLRR AA KEKELA Y E 
Sbjct: 61  ------KGSKNTRESELRTEIKQLLREASALSQPATFAQAAKLRRSAATKEKELAQYLEQ 120

Query: 121 RNKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAN 180
            +KE+K SY +YG+ LL SKV++            +A +   LVQPFG  LSW  GG   
Sbjct: 121 HHKEIKLSYDMYGKGLLASKVVIYLILVLCFWRTPIAIIAKQLVQPFGTLLSWGTGGHMT 174

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQ 210
            +V               +VGIIPWLILS RVSK+VC+
Sbjct: 181 GHV---------------MVGIIPWLILSNRVSKYVCR 174

[Close]

BLAST of Clc10G00300 vs. ExPASy TrEMBL
Match: A0A1S3BKE1 (uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68
Identity = 157/221 (71.04%), Postives = 162/221 (73.30%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           MEAEGIVEH SSIAAPFIFFIVIGFQFLARWLEHLKK                       
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKK----------------------- 62

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GSNSQVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES
Sbjct: 63  ------GGSNSQVELELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 122

Query: 121 RNKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAN 180
           RNKE+KTSYGLY +VLLISKVI+          ASVATVPHHLVQPFGKFLSW+AGGT N
Sbjct: 123 RNKEIKTSYGLYSQVLLISKVIIYIVLVCWFWRASVATVPHHLVQPFGKFLSWKAGGTVN 179

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           DYVK               VGIIPWLILSTRVSKFVCQV K
Sbjct: 183 DYVK---------------VGIIPWLILSTRVSKFVCQVVK 179

[Close]

BLAST of Clc10G00300 vs. ExPASy TrEMBL
Match: A0A0A0L4T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.0e-67
Identity = 154/221 (69.68%), Postives = 161/221 (72.85%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           ME EGIVEHRSSIAAPFIFFIVIGFQFLA+WLEHLKK                       
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKK----------------------- 60

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GSNSQVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQES
Sbjct: 61  ------RGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120

Query: 121 RNKEMKTSYGLYGRVLLISKVIL---------LASVATVPHHLVQPFGKFLSWRAGGTAN 180
           RNKE+KTSYGLY +VLL+SKVI+          ASVATVPHHLVQPFGKFLSWRAGGT N
Sbjct: 121 RNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVN 177

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           DYVK               VGIIPWLILSTRVSKFV +V K
Sbjct: 181 DYVK---------------VGIIPWLILSTRVSKFVFRVVK 177

[Close]

BLAST of Clc10G00300 vs. ExPASy TrEMBL
Match: A0A6J1L884 (uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.8e-64
Identity = 150/220 (68.18%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 2   EAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAICP 61
           EAEGIVEHRSSIAAP IF IVI FQFLARWLEHLKK                        
Sbjct: 6   EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKK------------------------ 65

Query: 62  TLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 121
                 GSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR
Sbjct: 66  -----GGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 125

Query: 122 NKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAND 181
           NKE+KTSYGLY RVLLISKV +           SVATVPHHLVQPFG+ LSW+AGG  ND
Sbjct: 126 NKEIKTSYGLYSRVLLISKVFMYITLVFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVND 181

Query: 182 YVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           YVK               VGIIPWLILSTRVSKFVCQV +
Sbjct: 186 YVK---------------VGIIPWLILSTRVSKFVCQVVR 181

[Close]

BLAST of Clc10G00300 vs. ExPASy TrEMBL
Match: A0A6J1E9M6 (uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC111431128 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.6e-64
Identity = 149/220 (67.73%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 2   EAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAICP 61
           EAEGIVEHRSSIAAP IF +VI FQFLARWLEHLKK                        
Sbjct: 4   EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKK------------------------ 63

Query: 62  TLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 121
                 GSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR
Sbjct: 64  -----GGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR 123

Query: 122 NKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAND 181
           NKE+KTSYGLY RVLLISKV +           SVATVPHHLVQPFG+ LSW+AGG  ND
Sbjct: 124 NKEIKTSYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVND 179

Query: 182 YVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVAK 213
           YVK               VGIIPWLILSTRVSKFVCQV +
Sbjct: 184 YVK---------------VGIIPWLILSTRVSKFVCQVVR 179

[Close]

BLAST of Clc10G00300 vs. ExPASy TrEMBL
Match: A0A6J1I7A9 (uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 145/220 (65.91%), Postives = 156/220 (70.91%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           MEAE IVEHR+SI AP IF IVI FQFLA WL+HLKK                       
Sbjct: 1   MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKK----------------------- 60

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GSN+QVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES
Sbjct: 61  ------RGSNNQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120

Query: 121 RNKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAN 180
           R+K++K+SYGLY RVLLISKV++          ASVATVPHHLVQPFG+FLSWRAGG  N
Sbjct: 121 RSKKVKSSYGLYSRVLLISKVLIYIVLVCWFWRASVATVPHHLVQPFGRFLSWRAGGIVN 176

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQVA 212
           DYVK               VGIIPWLILSTRVSKFVC+VA
Sbjct: 181 DYVK---------------VGIIPWLILSTRVSKFVCRVA 176

[Close]

BLAST of Clc10G00300 vs. TAIR 10
Match: AT4G16444.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 156.0 bits (393), Expect = 3.4e-38
Identity = 98/218 (44.95%), Postives = 120/218 (55.05%), Query Frame = 0


Query: 1   MEAEGIVEHRSSIAAPFIFFIVIGFQFLARWLEHLKKVYLKFRAVARFSFFVDRLENAIC 60
           ME E ++E R  +AAP  F +V+ FQ L++WL+ LKK                       
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKK----------------------- 60

Query: 61  PTLLREVGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQES 120
                  GS +  E ELR  IKQLLREAS LSQP+TFAQAAKLRR AA KEKELA Y E 
Sbjct: 61  ------KGSKNTRESELRTEIKQLLREASALSQPATFAQAAKLRRSAATKEKELAQYLEQ 120

Query: 121 RNKEMKTSYGLYGRVLLISKVILL---------ASVATVPHHLVQPFGKFLSWRAGGTAN 180
            +KE+K SY +YG+ LL SKV++            +A +   LVQPFG  LSW  GG   
Sbjct: 121 HHKEIKLSYDMYGKGLLASKVVIYLILVLCFWRTPIAIIAKQLVQPFGTLLSWGTGGHMT 174

Query: 181 DYVKHATDNNMKCLSIATIVGIIPWLILSTRVSKFVCQ 210
            +V               +VGIIPWLILS RVSK+VC+
Sbjct: 181 GHV---------------MVGIIPWLILSNRVSKYVCR 174

The following BLAST results are available for this feature:

BLAST of Clc10G00300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448478.1	2.3e-68	71.04	PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]	[more]
XP_004146176.1	1.2e-66	69.68	uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical ...	[more]
XP_023007643.1	5.7e-64	68.18	uncharacterized protein LOC111500212 [Cucurbita maxima]	[more]
XP_022923433.1	7.5e-64	67.73	uncharacterized protein LOC111431128 [Cucurbita moschata] >KAG6577814.1 Guided e...	[more]
XP_038904813.1	2.2e-63	66.97	uncharacterized protein LOC120091071 [Benincasa hispida]	[more]

BLAST of Clc10G00300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H5D2	4.8e-37	44.95	Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1	[more]

BLAST of Clc10G00300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BKE1	1.1e-68	71.04	uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=...	[more]
A0A0A0L4T9	6.0e-67	69.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1	[more]
A0A6J1L884	2.8e-64	68.18	uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212...	[more]
A0A6J1E9M6	3.6e-64	67.73	uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1I7A9	1.3e-61	65.91	uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261...	[more]

BLAST of Clc10G00300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16444.1	3.4e-38	44.95	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..127
None	No IPR available	PANTHER	PTHR11760:SF44	BNAC07G33680D PROTEIN	coord: 70..203
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 70..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G00300.2	Clc10G00300.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016020	membrane