Clc09G24140 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G24140
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionRWP-RK domain-containing protein
LocationClcChr09: 37461728 .. 37464669 (-)
RNA-Seq ExpressionClc09G24140
SyntenyClc09G24140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTAATTGAGTTCCTGTCCAAAAAGCAAATGTATGTGATTAAGCCGGAGGAGATAGGAATTGTTCTCCGTTTCCGTCCTACTGATCTCTCGACGGCGATACCGGCCACCGCTTTGGTTAGGGTTACTGCTTCGTCCCACCTGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTCTGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGGTATATTAGCGGTTTCATGTTGGATTGGTTCCGCATAAGAAAGTAATTAAACCAAACATGTTGGCAATTAGATGTTTCCGGAGTTGCGGACGGATATGATGGCTTTATCTTTGTGATCAATTTCGGCACAATTTACATTTTTGCCATTTGAGTTGCTACAAATTGTTTTGAAATTGGAGAAATTTTGATATACCTTTGCTGTTATTTGGTCGATGCCTTCGATTAGTGGGCCAATCTACGGCCATTATGAACCAGTTCCTTCTATTTCGTTTCTTTGCGAGACTTGGGATGTTAAGAGCGAGTGTGTTTTGCTTTGATTAACAGGAAATATATTGTTTGCTTTTGCATCACCTGCATCAGATGCTATTTTTCATAATACAGAAAAGCCTTCCAATGGTACAGATCCAAGGAATGCTACCATTACAAAAAGTTTGTATGCATCAGATAATCTATTGAATGTCTAAATAAATCAATGTTACCAACTTGGTATTTGATGATGGTCACTAATCTTTTTGACATCGTTGTTATCCATCATATATGAGAATGAAATAGAAATAGAAATCTTTGTAGCTTATATTTATTTGGTCATCGCTATTCTTCTTGAGAGGTTTAGTTCACAATCCATCTGCCCTTTTCTTCCAACTGAATTTCGCATTTACTGAGACTTGAGAGGTTCTCCTGGTTCAACAATTTACTTAGACTTGAAAGGTGTAGCTAATGAATGTTTCGTTGTAATTGTGTCTCTAATCATGCTGTTCATAGTTCCTCCTGTTTTCGTGTGATATCAAAATTTTATCTGGACTATTTTTGTGAAATATTATTTTGCTGTCATTTGAGTTTAGTGATAGTTGTATAATATATTTGTCGTATTTCTCTCGTAATAATGCTTTTTGGATTTCATGCATACTACCAAACGAACAACTTCTATTCCCCTTTCTCACTTTCACTTTTATCATCCTACTCGGTAACAAACCAGCTGTCGACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATTAACGCACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCTATGAGTTTGGACGAGTTCAAGTATGGGTTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAGGTAGCTGTCCAGATGAAATCAATAATGAAGAAGATGACAAACATCACTTCAAAGTAGTAAATGATGGTTTCACATCTTTAATAGACCAAGATAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGGCTTCTGACAGCTTTGAGAAGAAGAAGTGTGGAGAGAGGACGAGAAGTACTAAAGCATGGTAATTATTCTCATGGCCAAAGTTTAAACAAGTTAAGCAAGAAAGAACAATCATTACTTCTAAGCATATTCAGATCATCTACTCCAAATGAATGGATGAATAACTCGTAACTTCAGGGGCAACTGCTTTGGTCGTGGTACTCCGCCCTTCATAAGGTATTTCAATAGTTCTACTGTTCAATCGTTACTTCTCTTATTTAAGATTGAGTATTTGGTTGCTCATAATCAGAAGTAGCTGTTGCAAACAATTCTTGATTTATCATGAAATAAGAAAGAAATATGTAATATACTTGTCAGGTGCATATTCCCATCCTCCATAACAAGGAGTATAAAGTAGCCTATGGTAAGTAGTAACATGTTCTTATACAGAAATGCGACTTTTATACCAGTAAGATAAGATGCTTTTGGGATTATAGTCAATCATTTGTAGGTTATAATTACCAAAACTTGATAGCTCAAATATTTATCGATTTAGTAATTCTATTACCAAGTCTTGATCCCCATTTTCTTAAACCATGTTCAGAATTCTCTCTGATGCGACAGCTTGTGCGGTGATTAAGAATTTGATTTTAGTTATAGACTGATCTTTCATAAACGGTAATGAACTGGTTTTAAATTGCAAATTGGCAATTGACCGAGTTATTAATTGACATTAAGCAATATATTTATGTGCAACATGTTCAGTATTAATTGAGTTTGTGATTCTTTTTCCATTAGGTTGGCAACTGTTATTTGGTAGAACAATTGAAAGTAGTTGTCTTGAATATTTTTTTCTGATTGTTGCTCAAGGATAGTAAATGGGAAATTTCTTGTCGAATTGATTGACTATTATAAGATGATAAATTAGGCTTCTTTTTTCTTTATTTGAACAGACCCTGTTGGCCAAATTTTAGATGTAGAAAAAGGAAGAAAAAAGGTGGATGAAGGGAAACCGACAATATTTGGGCCAGAGTTGGAGGGACCCAGTGGCCCACTTGAGGGGCCATCCTTAAACAACAGCCCATGCCTATTGCTCCCTGCACAGATGACCCGTTTCCGTCAGGTGACTGCCATTATTAATCTCATCCAAATTCTCAACTTTAAACCATCTCTTTCTCCTCCTTTTCAAATTTTTATTGATGCAATTGACAACTTCTGTTCATCACAATTTCTCTCTTTTGAAAGTCGAAGTAAATTCTTTGACTTAATATTACCCCCTCTATTTTGAGTCAAAATTTTAAATCTCCATCTTCAGATACATAATTCTGTTTTACACTAGTTTCCTTTCCTTATCTACCATCACCATGTTGTTATTATCAATTTTTCTTTGACTTGAGAATTTATCTACTCGAACTTTGAGGTTTGAA

mRNA sequence

ATGGTTGTAATTGAGTTCCTGTCCAAAAAGCAAATGTATGTGATTAAGCCGGAGGAGATAGGAATTGTTCTCCGTTTCCGTCCTACTGATCTCTCGACGGCGATACCGGCCACCGCTTTGGTTAGGGTTACTGCTTCGTCCCACCTGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTCTGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAGCAGCTAGGAAACATTAACGCACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCTATGAGTTTGGACGAGTTCAAGTATGGGTTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAGGTAGCTGTCCAGATGAAATCAATAATGAAGAAGATGACAAACATCACTTCAAAGTAGTAAATGATGGTTTCACATCTTTAATAGACCAAGATAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGGCTTCTGACAGCTTTGAGAAGAAGAAGTGTGGAGAGAGGACGAGAAGGGCAACTGCTTTGGTCGTGGTACTCCGCCCTTCATAAGGTGCATATTCCCATCCTCCATAACAAGGAGTATAAAGTAGCCTATGACCCTGTTGGCCAAATTTTAGATGTAGAAAAAGGAAGAAAAAAGGTGGATGAAGGGAAACCGACAATATTTGGGCCAGAGTTGGAGGGACCCAGTGGCCCACTTGAGGGGCCATCCTTAAACAACAGCCCATGCCTATTGCTCCCTGCACAGATGACCCGTTTCCGTCAGGTGACTGCCATTATTAATCTCATCCAAATTCTCAACTTTAAACCATCTCTTTCTCCTCCTTTTCAAATTTTTATTGATGCAATTGACAACTTCTGTTCATCACAATTTCTCTCTTTTGAAAGTCGAAGTAAATTCTTTGACTTAATATTACCCCCTCTATTTTGAGTCAAAATTTTAAATCTCCATCTTCAGATACATAATTCTGTTTTACACTAGTTTCCTTTCCTTATCTACCATCACCATGTTGTTATTATCAATTTTTCTTTGACTTGAGAATTTATCTACTCGAACTTTGAGGTTTGAA

Coding sequence (CDS)

ATGGTTGTAATTGAGTTCCTGTCCAAAAAGCAAATGTATGTGATTAAGCCGGAGGAGATAGGAATTGTTCTCCGTTTCCGTCCTACTGATCTCTCGACGGCGATACCGGCCACCGCTTTGGTTAGGGTTACTGCTTCGTCCCACCTGCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTCTGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAGCAGCTAGGAAACATTAACGCACAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCTATGAGTTTGGACGAGTTCAAGTATGGGTTCCCCTCTGGTGGATTACCATCTATATCAAATAAATGGTGGGGAGGTAGCTGTCCAGATGAAATCAATAATGAAGAAGATGACAAACATCACTTCAAAGTAGTAAATGATGGTTTCACATCTTTAATAGACCAAGATAAATCTGAAAGTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGGCTTCTGACAGCTTTGAGAAGAAGAAGTGTGGAGAGAGGACGAGAAGGGCAACTGCTTTGGTCGTGGTACTCCGCCCTTCATAAGGTGCATATTCCCATCCTCCATAACAAGGAGTATAAAGTAGCCTATGACCCTGTTGGCCAAATTTTAGATGTAGAAAAAGGAAGAAAAAAGGTGGATGAAGGGAAACCGACAATATTTGGGCCAGAGTTGGAGGGACCCAGTGGCCCACTTGAGGGGCCATCCTTAAACAACAGCCCATGCCTATTGCTCCCTGCACAGATGACCCGTTTCCGTCAGGTGACTGCCATTATTAATCTCATCCAAATTCTCAACTTTAAACCATCTCTTTCTCCTCCTTTTCAAATTTTTATTGATGCAATTGACAACTTCTGTTCATCACAATTTCTCTCTTTTGAAAGTCGAAGTAAATTCTTTGACTTAATATTACCCCCTCTATTTTGA

Protein sequence

MVVIEFLSKKQMYVIKPEEIGIVLRFRPTDLSTAIPATALVRVTASSHLPLLFLTPSPNTSLCHFTGRCPVPYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEINNEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGREGQLLWSWYSALHKVHIPILHNKEYKVAYDPVGQILDVEKGRKKVDEGKPTIFGPELEGPSGPLEGPSLNNSPCLLLPAQMTRFRQVTAIINLIQILNFKPSLSPPFQIFIDAIDNFCSSQFLSFESRSKFFDLILPPLF
Homology
[Close]
BLAST of Clc09G24140 vs. NCBI nr
Match: XP_038887241.1 (uncharacterized protein LOC120077433 [Benincasa hispida])

HSP 1 Score: 213.4 bits (542), Expect = 2.9e-51
Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 75  QQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEINNEE 134
           QQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPS+SNKWWG SCPDE NNEE
Sbjct: 12  QQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKWWGSSCPDETNNEE 71

Query: 135 DDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           DDKHHFKVVNDGFTSLID +KSESI EDLQADLQGT LLTALR+RSV RGR+
Sbjct: 72  DDKHHFKVVNDGFTSLIDPEKSESIGEDLQADLQGTHLLTALRKRSVVRGRK 123

[Close]
BLAST of Clc09G24140 vs. NCBI nr
Match: XP_022930611.1 (uncharacterized protein LOC111437021 isoform X1 [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-49
Identity = 115/176 (65.34%), Postives = 124/176 (70.45%), Query Frame = 0 

Query: 30  DLSTAIPATALVRVT---ASSHLPLLFLTPSPNTSLCHFTGRCP---------------- 89
           DLST IPA ALVRV+    S+ LP       P  SL     +CP                
Sbjct: 21  DLSTPIPAAALVRVSFLLPSTSLPNAITKYFP-PSLSLVAAQCPPSNIQQVNEKMSKLNG 80

Query: 90  VPYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEI 149
            P   Q GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWG SCPDE 
Sbjct: 81  TPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDET 140

Query: 150 NNEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           NNE DDKHHFKVVNDG  S+IDQ+KS SIEEDLQADLQGT LLTALR+RS+ERGR+
Sbjct: 141 NNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRK 195

[Close]
BLAST of Clc09G24140 vs. NCBI nr
Match: XP_022930612.1 (uncharacterized protein LOC111437021 isoform X2 [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-49
Identity = 115/176 (65.34%), Postives = 124/176 (70.45%), Query Frame = 0 

Query: 30  DLSTAIPATALVRVT---ASSHLPLLFLTPSPNTSLCHFTGRCP---------------- 89
           DLST IPA ALVRV+    S+ LP       P  SL     +CP                
Sbjct: 21  DLSTPIPAAALVRVSFLLPSTSLPNAITKYFP-PSLSLVAAQCPPSNIQQVNEKMSKLNG 80

Query: 90  VPYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEI 149
            P   Q GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWG SCPDE 
Sbjct: 81  TPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDET 140

Query: 150 NNEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           NNE DDKHHFKVVNDG  S+IDQ+KS SIEEDLQADLQGT LLTALR+RS+ERGR+
Sbjct: 141 NNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRK 195

[Close]
BLAST of Clc09G24140 vs. NCBI nr
Match: XP_023529351.1 (uncharacterized protein LOC111792233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-46
Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 0 

Query: 72  PYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEIN 131
           P   Q GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWG SCPDE N
Sbjct: 8   PQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETN 67

Query: 132 NEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           NE DDKHHFKVVNDG  S+IDQ+KS SIEEDLQADLQGT LLTALR+RS+ERGR+
Sbjct: 68  NEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRK 122

[Close]
BLAST of Clc09G24140 vs. NCBI nr
Match: KAG7023000.1 (hypothetical protein SDJN02_16736 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-46
Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 0 

Query: 72  PYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEIN 131
           P   Q GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWG SCPDE N
Sbjct: 8   PQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETN 67

Query: 132 NEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           NE DDKHHFKVVNDG  S+IDQ+KS SIEEDLQADLQGT LLTALR+RS+ERGR+
Sbjct: 68  NEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRK 122

[Close]
BLAST of Clc09G24140 vs. ExPASy TrEMBL
Match: A0A6J1ER19 (uncharacterized protein LOC111437021 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437021 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.0e-50
Identity = 115/176 (65.34%), Postives = 124/176 (70.45%), Query Frame = 0 

Query: 30  DLSTAIPATALVRVT---ASSHLPLLFLTPSPNTSLCHFTGRCP---------------- 89
           DLST IPA ALVRV+    S+ LP       P  SL     +CP                
Sbjct: 21  DLSTPIPAAALVRVSFLLPSTSLPNAITKYFP-PSLSLVAAQCPPSNIQQVNEKMSKLNG 80

Query: 90  VPYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEI 149
            P   Q GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWG SCPDE 
Sbjct: 81  TPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDET 140

Query: 150 NNEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           NNE DDKHHFKVVNDG  S+IDQ+KS SIEEDLQADLQGT LLTALR+RS+ERGR+
Sbjct: 141 NNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRK 195

[Close]
BLAST of Clc09G24140 vs. ExPASy TrEMBL
Match: A0A6J1ERE4 (uncharacterized protein LOC111437021 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437021 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.0e-50
Identity = 115/176 (65.34%), Postives = 124/176 (70.45%), Query Frame = 0 

Query: 30  DLSTAIPATALVRVT---ASSHLPLLFLTPSPNTSLCHFTGRCP---------------- 89
           DLST IPA ALVRV+    S+ LP       P  SL     +CP                
Sbjct: 21  DLSTPIPAAALVRVSFLLPSTSLPNAITKYFP-PSLSLVAAQCPPSNIQQVNEKMSKLNG 80

Query: 90  VPYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEI 149
            P   Q GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWG SCPDE 
Sbjct: 81  TPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDET 140

Query: 150 NNEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           NNE DDKHHFKVVNDG  S+IDQ+KS SIEEDLQADLQGT LLTALR+RS+ERGR+
Sbjct: 141 NNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRK 195

[Close]
BLAST of Clc09G24140 vs. ExPASy TrEMBL
Match: A0A6J1JJK7 (uncharacterized protein LOC111486389 OS=Cucurbita maxima OX=3661 GN=LOC111486389 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.0e-46
Identity = 94/115 (81.74%), Postives = 100/115 (86.96%), Query Frame = 0 

Query: 72  PYKQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEIN 131
           P   Q GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWG SCPDE N
Sbjct: 8   PQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETN 67

Query: 132 NEEDDKHHFKVVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGRE 187
           NE  DKHHFKVVNDG  S+IDQ+KS SIEEDLQADLQGT LLTALR+RS+ERGR+
Sbjct: 68  NEVGDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLERGRK 122

[Close]
BLAST of Clc09G24140 vs. ExPASy TrEMBL
Match: A0A6J1D407 (uncharacterized protein LOC111016830 OS=Momordica charantia OX=3673 GN=LOC111016830 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.1e-41
Identity = 92/124 (74.19%), Postives = 103/124 (83.06%), Query Frame = 0 

Query: 74  KQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCPDEINNE 133
           +QQ GNINAQMRR Q+VQSTN VQG   L+EFKYGFPSGGLPS+SNKWWG S PDE NNE
Sbjct: 13  QQQEGNINAQMRRPQHVQSTNLVQGSTMLNEFKYGFPSGGLPSLSNKWWGSSAPDETNNE 72

Query: 134 EDDKHHFK-VVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERGREGQLLWS 193
           ED KH+FK VV DG  SLIDQ+KSESIEEDLQADL GTRLLTALR+RS+ERGR+     S
Sbjct: 73  EDAKHNFKNVVADGSISLIDQEKSESIEEDLQADLPGTRLLTALRKRSMERGRKALKNGS 132

Query: 194 WYSA 197
           ++ A
Sbjct: 133 YFHA 136

[Close]
BLAST of Clc09G24140 vs. ExPASy TrEMBL
Match: A0A7N2MCY2 (RWP-RK domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-17
Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 0 

Query: 75  QQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSISNKWWGGSCP------- 134
           QQ G+ N Q  RSQN+ ST+  +G  +LDEFKYGFPS GL + SNKWWG S P       
Sbjct: 162 QQQGSKNVQTLRSQNLLSTSLTKGIAALDEFKYGFPSNGLSTASNKWWGSSSPNGCEGKL 221

Query: 135 -DEINNEEDDKHHFK--VVNDGFTSLIDQDKSESIEEDLQADLQGTRLLTALRRRSVERG 187
            D +   EDDKH  +  VV+     ++D+++  + +ED     QGT LLT +R+R+VE G
Sbjct: 222 GDGVETNEDDKHKSEEMVVDSPGVVIVDKEECVTGKEDSNIGPQGTGLLTTVRKRTVEEG 281

[Close]
BLAST of Clc09G24140 vs. TAIR 10
Match: AT1G06500.1 (unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-06
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 92  STNWVQGPMSLDEFKYGFPSGGLPSISNKWWG 124
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWG 52

[Close]
BLAST of Clc09G24140 vs. TAIR 10
Match: AT1G06500.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-06
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 92  STNWVQGPMSLDEFKYGFPSGGLPSISNKWWG 124
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWG 52

[Close]
BLAST of Clc09G24140 vs. TAIR 10
Match: AT1G06500.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-06
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 92  STNWVQGPMSLDEFKYGFPSGGLPSISNKWWG 124
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWG 52

[Close]
BLAST of Clc09G24140 vs. TAIR 10
Match: AT1G06500.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-06
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 92  STNWVQGPMSLDEFKYGFPSGGLPSISNKWWG 124
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWG 52

The following BLAST results are available for this feature:
BLAST of Clc09G24140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887241.12.9e-5191.07uncharacterized protein LOC120077433 [Benincasa hispida][more]
XP_022930611.11.2e-4965.34uncharacterized protein LOC111437021 isoform X1 [Cucurbita moschata][more]
XP_022930612.11.2e-4965.34uncharacterized protein LOC111437021 isoform X2 [Cucurbita moschata][more]
XP_023529351.11.3e-4682.61uncharacterized protein LOC111792233 [Cucurbita pepo subsp. pepo][more]
KAG7023000.11.3e-4682.61hypothetical protein SDJN02_16736 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Clc09G24140 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc09G24140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ER196.0e-5065.34uncharacterized protein LOC111437021 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1ERE46.0e-5065.34uncharacterized protein LOC111437021 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JJK74.0e-4681.74uncharacterized protein LOC111486389 OS=Cucurbita maxima OX=3661 GN=LOC111486389... [more]
A0A6J1D4075.1e-4174.19uncharacterized protein LOC111016830 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A7N2MCY21.3e-1745.90RWP-RK domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
BLAST of Clc09G24140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G06500.13.1e-0659.38unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bac... [more]
AT1G06500.23.1e-0659.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G06500.33.1e-0659.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G06500.43.1e-0659.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G24140.2Clc09G24140.2mRNA