Homology
BLAST of Clc09G24087 vs. NCBI nr
Match:
KAA0032472.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17761.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 129/184 (70.11%), Postives = 135/184 (73.37%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
ML SFCG P LSPISTSK IISNQ YLSM DKYCTTMRDLQQF AHLIKSGQA DSFAAS
Sbjct: 1 MLASFCGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIDSFAAS 60
Query: 61 RI--FEAS------------LKAKTPKL-------------------SSLFIDMLVTSQV 120
RI F AS L+ + P L SLFIDMLV+SQV
Sbjct: 61 RILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALSLFIDMLVSSQV 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPS+FKAYSQLGLA+D AQLHGRI+KLGLQFDPFIRNTILYMYATGGFL EA R
Sbjct: 121 EPQRLTYPSIFKAYSQLGLAYDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARR 180
BLAST of Clc09G24087 vs. NCBI nr
Match:
XP_008447140.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucumis melo])
HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 129/184 (70.11%), Postives = 135/184 (73.37%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
ML SFCG P LSPISTSK IISNQ YLSM DKYCTTMRDLQQF AHLIKSGQA DSFAAS
Sbjct: 1 MLASFCGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIDSFAAS 60
Query: 61 RI--FEAS------------LKAKTPKL-------------------SSLFIDMLVTSQV 120
RI F AS L+ + P L SLFIDMLV+SQV
Sbjct: 61 RILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALSLFIDMLVSSQV 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPS+FKAYSQLGLA+D AQLHGRI+KLGLQFDPFIRNTILYMYATGGFL EA R
Sbjct: 121 EPQRLTYPSIFKAYSQLGLAYDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARR 180
BLAST of Clc09G24087 vs. NCBI nr
Match:
XP_004151347.1 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucumis sativus] >KGN44257.1 hypothetical protein Csa_015749 [Cucumis sativus])
HSP 1 Score: 225.3 bits (573), Expect = 3.5e-55
Identity = 128/184 (69.57%), Postives = 134/184 (72.83%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
ML S CG P LSPISTSK IISNQ YLSM DKYCTTMRDLQQF AHLIKSGQA +SFAAS
Sbjct: 1 MLASICGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAAS 60
Query: 61 RI--FEAS------------LKAKTPKLSS-------------------LFIDMLVTSQV 120
RI F AS L+ + P L S LFIDMLV+SQV
Sbjct: 61 RILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQV 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPS+FKAYSQLGLAHD AQLHGRI+KLGLQFDPFIRNTILYMYATGGFL EA R
Sbjct: 121 EPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARR 180
BLAST of Clc09G24087 vs. NCBI nr
Match:
XP_023530494.1 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 204.1 bits (518), Expect = 8.3e-49
Identity = 112/184 (60.87%), Postives = 128/184 (69.57%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
MLT++CG P LSPIS+SK + +Q YLSM DK CTTMRDLQQ AHLIKSG+AKDSFAAS
Sbjct: 1 MLTTYCGLPSLSPISSSKLSLFDQPYLSMVDKNCTTMRDLQQIHAHLIKSGRAKDSFAAS 60
Query: 61 R--------------------------------IFEASLKAKTPKLS-SLFIDMLVTSQV 120
R I ++ P+++ LFI MLV+SQ+
Sbjct: 61 RVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIRGFSQSSNPQMALYLFIHMLVSSQI 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPSVFKAYSQLGLAHD AQLHGR++KLG+QFDPFIRNTILYMYA GFLDEA R
Sbjct: 121 EPQRLTYPSVFKAYSQLGLAHDGAQLHGRVLKLGIQFDPFIRNTILYMYANCGFLDEARR 180
BLAST of Clc09G24087 vs. NCBI nr
Match:
KAG6589301.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 112/184 (60.87%), Postives = 127/184 (69.02%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
MLT++CG P L PIS+SK + +Q YLSM DK CTTMRDLQQ AHLIKSG+AKDSFAAS
Sbjct: 1 MLTTYCGLPSLPPISSSKLSLFDQPYLSMVDKNCTTMRDLQQIHAHLIKSGRAKDSFAAS 60
Query: 61 R--------------------------------IFEASLKAKTPKLS-SLFIDMLVTSQV 120
R I ++ P+++ LFI MLV+SQ+
Sbjct: 61 RVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIRGFSRSSNPQMALYLFIHMLVSSQI 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPSVFKAYSQLGLAHD AQLHGR+VKLG+QFDPFIRNTILYMYA GFLDEA R
Sbjct: 121 EPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQFDPFIRNTILYMYANCGFLDEARR 180
BLAST of Clc09G24087 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 6.6e-25
Identity = 72/171 (42.11%), Postives = 93/171 (54.39%), Query Frame = 0
Query: 13 PISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAASR----------- 72
P S +S YL + D C+TMR+L+Q A LIK+G D+ ASR
Sbjct: 14 PAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSD 73
Query: 73 ---------------------IFEASLKAKTPKLS-SLFIDMLVTS-QVEPQRLTYPSVF 132
I ++ P+++ S+FIDML +S V+PQRLTYPSVF
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 133 KAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHRIF 150
KAY +LG A D QLHG ++K GL+ D FIRNT+L+MY T G L EA RIF
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF 184
BLAST of Clc09G24087 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 45/176 (25.57%), Postives = 82/176 (46.59%), Query Frame = 0
Query: 8 HPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAASRIFE--- 67
HP S + + ++S+ ++ C ++R L+Q H+I++G D ++AS++F
Sbjct: 15 HPNFSNPNQPTTNNERSRHISLIER-CVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAA 74
Query: 68 ----ASLK------AKTPKLSSL---------------------FIDMLVTSQVEPQRLT 127
ASL+ + PK +S F+DM+ SQ P + T
Sbjct: 75 LSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 134
Query: 128 YPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHRIF 150
+P + KA +++ LHG VK + D F+ N++++ Y + G LD A ++F
Sbjct: 135 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
BLAST of Clc09G24087 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 9.6e-08
Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 0
Query: 61 RIFEASLKAKTPKLSSLFIDMLVTSQVEPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKL 120
R F S + K +LF +M+ VEP R T+PSV KA ++ G + Q+HG +K
Sbjct: 98 RGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157
Query: 121 GLQFDPFIRNTILYMYATGGFLDEAHRIF 150
G D F+ + ++ MY GF+ +A +F
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
BLAST of Clc09G24087 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 34/132 (25.76%), Postives = 61/132 (46.21%), Query Frame = 0
Query: 20 IISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAASRIFEASLKAKTPKLSSLFI 79
+ S L L + D +L + + Q + F + + P + F
Sbjct: 46 VASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFY 105
Query: 80 DMLVTSQVEPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATG 139
++ S++ P +T+P + KA S++ Q H +IV+ G Q D ++ N++++MYA
Sbjct: 106 TQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANC 165
Query: 140 GFLDEAHRIFNQ 152
GF+ A RIF Q
Sbjct: 166 GFIAAAGRIFGQ 177
BLAST of Clc09G24087 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 0
Query: 78 FIDMLVTSQVEPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYA 137
FI+M+ T+ + P TYP V KA + + +HG +VK GL D F+ N ++ Y
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233
Query: 138 TGGFLDEAHRIFN 151
T GF+ +A ++F+
Sbjct: 234 THGFVTDALQLFD 246
BLAST of Clc09G24087 vs. ExPASy TrEMBL
Match:
A0A5A7SN44 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00010 PE=4 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 5.8e-56
Identity = 129/184 (70.11%), Postives = 135/184 (73.37%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
ML SFCG P LSPISTSK IISNQ YLSM DKYCTTMRDLQQF AHLIKSGQA DSFAAS
Sbjct: 1 MLASFCGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIDSFAAS 60
Query: 61 RI--FEAS------------LKAKTPKL-------------------SSLFIDMLVTSQV 120
RI F AS L+ + P L SLFIDMLV+SQV
Sbjct: 61 RILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALSLFIDMLVSSQV 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPS+FKAYSQLGLA+D AQLHGRI+KLGLQFDPFIRNTILYMYATGGFL EA R
Sbjct: 121 EPQRLTYPSIFKAYSQLGLAYDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARR 180
BLAST of Clc09G24087 vs. ExPASy TrEMBL
Match:
A0A1S3BG64 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489661 PE=4 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 5.8e-56
Identity = 129/184 (70.11%), Postives = 135/184 (73.37%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
ML SFCG P LSPISTSK IISNQ YLSM DKYCTTMRDLQQF AHLIKSGQA DSFAAS
Sbjct: 1 MLASFCGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIDSFAAS 60
Query: 61 RI--FEAS------------LKAKTPKL-------------------SSLFIDMLVTSQV 120
RI F AS L+ + P L SLFIDMLV+SQV
Sbjct: 61 RILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALSLFIDMLVSSQV 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPS+FKAYSQLGLA+D AQLHGRI+KLGLQFDPFIRNTILYMYATGGFL EA R
Sbjct: 121 EPQRLTYPSIFKAYSQLGLAYDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARR 180
BLAST of Clc09G24087 vs. ExPASy TrEMBL
Match:
A0A0A0K7F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G235760 PE=4 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 128/184 (69.57%), Postives = 134/184 (72.83%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
ML S CG P LSPISTSK IISNQ YLSM DKYCTTMRDLQQF AHLIKSGQA +SFAAS
Sbjct: 1 MLASICGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAAS 60
Query: 61 RI--FEAS------------LKAKTPKLSS-------------------LFIDMLVTSQV 120
RI F AS L+ + P L S LFIDMLV+SQV
Sbjct: 61 RILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQV 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPS+FKAYSQLGLAHD AQLHGRI+KLGLQFDPFIRNTILYMYATGGFL EA R
Sbjct: 121 EPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARR 180
BLAST of Clc09G24087 vs. ExPASy TrEMBL
Match:
A0A6J1ER84 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437074 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 4.4e-48
Identity = 111/184 (60.33%), Postives = 126/184 (68.48%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
MLT++CG P L PIS+SK + +Q YLSM DK CTTMRDLQQ AHLIKSG+AKDSFAAS
Sbjct: 1 MLTTYCGLPSLPPISSSKLSLFDQPYLSMVDKNCTTMRDLQQIHAHLIKSGRAKDSFAAS 60
Query: 61 R--------------------------------IFEASLKAKTPKLS-SLFIDMLVTSQV 120
R I ++ P+++ LFI MLV+SQ+
Sbjct: 61 RVLAFCASPLGNMDYAYLVFKQMQNPNVFCWNTIIRGFSQSSNPQMALYLFIHMLVSSQI 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EPQRLTYPSVFKAYSQLGLAHD AQLHGR+VKLG+QFDPFIRNTILYMYA GFLD A R
Sbjct: 121 EPQRLTYPSVFKAYSQLGLAHDGAQLHGRVVKLGIQFDPFIRNTILYMYANCGFLDGARR 180
BLAST of Clc09G24087 vs. ExPASy TrEMBL
Match:
A0A6J1JLQ0 (pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486336 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.2e-47
Identity = 109/184 (59.24%), Postives = 126/184 (68.48%), Query Frame = 0
Query: 1 MLTSFCGHPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAAS 60
MLT++CG P LSPIS+SK + +Q YLSM DK CTTMRDLQQ AHLIKSG+AK+SFAAS
Sbjct: 1 MLTAYCGLPSLSPISSSKLSLFDQPYLSMVDKNCTTMRDLQQIHAHLIKSGRAKESFAAS 60
Query: 61 R--------------------------------IFEASLKAKTPKLS-SLFIDMLVTSQV 120
R I ++ P+++ LFI MLV+SQ+
Sbjct: 61 RVLAFCASPLGNMDYAYLVFKQMQNPNIFCWNTIIRGFSQSSNPQMALYLFIHMLVSSQI 120
Query: 121 EPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHR 152
EP RLTYPSVFKAYSQLGLAHD QLHGR+VKLG+QFDPFIRNTILYMYA GFL+EA R
Sbjct: 121 EPHRLTYPSVFKAYSQLGLAHDGTQLHGRVVKLGIQFDPFIRNTILYMYANCGFLNEARR 180
BLAST of Clc09G24087 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 115.2 bits (287), Expect = 4.7e-26
Identity = 72/171 (42.11%), Postives = 93/171 (54.39%), Query Frame = 0
Query: 13 PISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAASR----------- 72
P S +S YL + D C+TMR+L+Q A LIK+G D+ ASR
Sbjct: 14 PAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSD 73
Query: 73 ---------------------IFEASLKAKTPKLS-SLFIDMLVTS-QVEPQRLTYPSVF 132
I ++ P+++ S+FIDML +S V+PQRLTYPSVF
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 133 KAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHRIF 150
KAY +LG A D QLHG ++K GL+ D FIRNT+L+MY T G L EA RIF
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF 184
BLAST of Clc09G24087 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 45/176 (25.57%), Postives = 82/176 (46.59%), Query Frame = 0
Query: 8 HPPLSPISTSKSIISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAASRIFE--- 67
HP S + + ++S+ ++ C ++R L+Q H+I++G D ++AS++F
Sbjct: 15 HPNFSNPNQPTTNNERSRHISLIER-CVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAA 74
Query: 68 ----ASLK------AKTPKLSSL---------------------FIDMLVTSQVEPQRLT 127
ASL+ + PK +S F+DM+ SQ P + T
Sbjct: 75 LSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 134
Query: 128 YPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATGGFLDEAHRIF 150
+P + KA +++ LHG VK + D F+ N++++ Y + G LD A ++F
Sbjct: 135 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
BLAST of Clc09G24087 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 58.2 bits (139), Expect = 6.8e-09
Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 0
Query: 61 RIFEASLKAKTPKLSSLFIDMLVTSQVEPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKL 120
R F S + K +LF +M+ VEP R T+PSV KA ++ G + Q+HG +K
Sbjct: 98 RGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157
Query: 121 GLQFDPFIRNTILYMYATGGFLDEAHRIF 150
G D F+ + ++ MY GF+ +A +F
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
BLAST of Clc09G24087 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 34/132 (25.76%), Postives = 61/132 (46.21%), Query Frame = 0
Query: 20 IISNQLYLSMADKYCTTMRDLQQFRAHLIKSGQAKDSFAASRIFEASLKAKTPKLSSLFI 79
+ S L L + D +L + + Q + F + + P + F
Sbjct: 46 VASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFY 105
Query: 80 DMLVTSQVEPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYATG 139
++ S++ P +T+P + KA S++ Q H +IV+ G Q D ++ N++++MYA
Sbjct: 106 TQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANC 165
Query: 140 GFLDEAHRIFNQ 152
GF+ A RIF Q
Sbjct: 166 GFIAAAGRIFGQ 177
BLAST of Clc09G24087 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 54.7 bits (130), Expect = 7.6e-08
Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 0
Query: 78 FIDMLVTSQVEPQRLTYPSVFKAYSQLGLAHDRAQLHGRIVKLGLQFDPFIRNTILYMYA 137
FI+M+ T+ + P TYP V KA + + +HG +VK GL D F+ N ++ Y
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233
Query: 138 TGGFLDEAHRIFN 151
T GF+ +A ++F+
Sbjct: 234 THGFVTDALQLFD 246
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0032472.1 | 1.2e-55 | 70.11 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17761... | [more] |
XP_008447140.1 | 1.2e-55 | 70.11 | PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic ... | [more] |
XP_004151347.1 | 3.5e-55 | 69.57 | pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucumis sa... | [more] |
XP_023530494.1 | 8.3e-49 | 60.87 | pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita ... | [more] |
KAG6589301.1 | 1.1e-48 | 60.87 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9SJG6 | 6.6e-25 | 42.11 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
O82380 | 1.5e-08 | 25.57 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9FI80 | 9.6e-08 | 34.83 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Q9FG16 | 2.1e-07 | 25.76 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q0WN60 | 1.1e-06 | 35.62 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SN44 | 5.8e-56 | 70.11 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BG64 | 5.8e-56 | 70.11 | pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucumis ... | [more] |
A0A0A0K7F6 | 1.7e-55 | 69.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G235760 PE=4 SV=1 | [more] |
A0A6J1ER84 | 4.4e-48 | 60.33 | pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbit... | [more] |
A0A6J1JLQ0 | 2.2e-47 | 59.24 | pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT2G42920.1 | 4.7e-26 | 42.11 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G29760.1 | 1.1e-09 | 25.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G48910.1 | 6.8e-09 | 34.83 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G06540.1 | 1.5e-08 | 25.76 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G18485.1 | 7.6e-08 | 35.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |