Clc09G24080 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G24080
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	X8 domain-containing protein
Location	ClcChr09: 37428656 .. 37430077 (-)
RNA-Seq Expression	Clc09G24080
Synteny	Clc09G24080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGACACACGAGAGAGCTAAACCATGAGATTCAGAAATTTTCTTCCCAAATTTCCACCACTAAAAGGGATATTACTACCCCTATAACAACCGTTCCGACAATAATTCTTTCCAATCCCGCCGTGTCAACTCCATTTATCAATCCAACTTCAACCTCAGACACGTATTCTCCGGCCATGGGATCTCCCAAAAGATCATCTCCTCCTTCGTCAGGGGCTAGTTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTGCAAATTGCTCTAGACTACGCATGTGGCCATGGTGGTACTGATTGCTCAGCAATTCAAGCTGGTCAGAGCTGTTACAACCCAAACACCATTCATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTTCCAAATAGCTGTAACTTTGGTGGGACTGCTGTCATTACTAGCACTGACCCAAGTATGTTGCTTCCTTCAAAAGTTGTTTCTTTGTTGCCTCACTAGATAATAATGTGTTCTTTTACTATTCCCTCTCCCTTCTTTTTTCTTTTGGGGGAGGGGTTAACGGAGGGGAGAGCAAGATAAGGCGAACTTTCTATAATTTGGTCACAGCACTTTAGAGGTACAAGGTTGAACTGATTCCCTTAACACAAGCCCAAAGAATCAAAGAGTCTTACCATAGAATGACAGTTCCTTCTGAACAACCAGAAGCTTTGGAAATACTAAAAAGAACAGCCTTTGTGAACGAACTCTATTTGTCCTCTTTCACCTTCTTAAAACCTTCCGTGGGAAGTGTGGATATGAAGAAATTTAGTCTTTTCTTATTTCTAAATTCATGATCAGAACCCAAAATCTAATAATCAGAGGAAATTCAGCTTTACTCCCAGACCCCTCCCCCCCAAACTTTTTTTTTCCTTTTCCAAGTTGGGTTGGTGAATGAAGAAGGTTGGGTGTGTCTGTAGGGACTATAAAGTGATGTGAATTATTGAATCTGTAATGGGGTGTAGTGGAATTCTTCTTTCTGCAACTGCAAGATGTTTACGAACATAAAACTTCATAGATTGACTCTGTTTCTATAAAGTCTTGTTTATGTCTTTTCCCACCGCTATTTTTTTTCAGGTACTATGGCCTGTCAGTACACATCCACTAGGTAAAATGCCCATCTTCCATTGCTTCCATTTGCTTTCTTTTCCTGCTACCATCATTCATGTCCTAACAATGACACTGCCTTTTTTTCAACTTTCCAGCACAAGTTCATCAGTTCTAAACACCACAAATTCCAAGGGATCAACAGTGTTTGGTGCTGTACCCTCAAGCCCCTCTCCTTCAGCAGCAACTTGTCAAGAAATAAATGTTCTGCAACAACTATTTTTGTTGACCATGGTTTCTCTCAGATTATTACACACCAACAATCTTCATGGCTGA

mRNA sequence

ATGGCAGGACACACGAGAGAGCTAAACCATGAGATTCAGAAATTTTCTTCCCAAATTTCCACCACTAAAAGGGATATTACTACCCCTATAACAACCGTTCCGACAATAATTCTTTCCAATCCCGCCGTGTCAACTCCATTTATCAATCCAACTTCAACCTCAGACACGTATTCTCCGGCCATGGGATCTCCCAAAAGATCATCTCCTCCTTCGTCAGGGGCTAGTTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTGCAAATTGCTCTAGACTACGCATGTGGCCATGGTGGTACTGATTGCTCAGCAATTCAAGCTGGTCAGAGCTGTTACAACCCAAACACCATTCATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTTCCAAATAGCTGTAACTTTGGTGGGACTGCTGTCATTACTAGCACTGACCCAATCTTGTTTATGTCTTTTCCCACCGCTATTTTTTTTCAGGTACTATGGCCTGTCAGTACACATCCACTAGGTAAAATGCCCATCTTCCATTGCTTCCATTTGCTTTCTTTTCCTGCTACCATCATTCATGTCCTAACAATGACACTGCCTTTTTTTCAACTTTCCAGCACAAGTTCATCAGTTCTAAACACCACAAATTCCAAGGGATCAACAGTGTTTGGTGCTGTACCCTCAAGCCCCTCTCCTTCAGCAGCAACTTGTCAAGAAATAAATGTTCTGCAACAACTATTTTTGTTGACCATGGTTTCTCTCAGATTATTACACACCAACAATCTTCATGGCTGA

Coding sequence (CDS)

ATGGCAGGACACACGAGAGAGCTAAACCATGAGATTCAGAAATTTTCTTCCCAAATTTCCACCACTAAAAGGGATATTACTACCCCTATAACAACCGTTCCGACAATAATTCTTTCCAATCCCGCCGTGTCAACTCCATTTATCAATCCAACTTCAACCTCAGACACGTATTCTCCGGCCATGGGATCTCCCAAAAGATCATCTCCTCCTTCGTCAGGGGCTAGTTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTGCAAATTGCTCTAGACTACGCATGTGGCCATGGTGGTACTGATTGCTCAGCAATTCAAGCTGGTCAGAGCTGTTACAACCCAAACACCATTCATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTTCCAAATAGCTGTAACTTTGGTGGGACTGCTGTCATTACTAGCACTGACCCAATCTTGTTTATGTCTTTTCCCACCGCTATTTTTTTTCAGGTACTATGGCCTGTCAGTACACATCCACTAGGTAAAATGCCCATCTTCCATTGCTTCCATTTGCTTTCTTTTCCTGCTACCATCATTCATGTCCTAACAATGACACTGCCTTTTTTTCAACTTTCCAGCACAAGTTCATCAGTTCTAAACACCACAAATTCCAAGGGATCAACAGTGTTTGGTGCTGTACCCTCAAGCCCCTCTCCTTCAGCAGCAACTTGTCAAGAAATAAATGTTCTGCAACAACTATTTTTGTTGACCATGGTTTCTCTCAGATTATTACACACCAACAATCTTCATGGCTGA

Protein sequence

MAGHTRELNHEIQKFSSQISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMGSPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIFHCFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQEINVLQQLFLLTMVSLRLLHTNNLHG

Homology

[Close]

BLAST of Clc09G24080 vs. NCBI nr
Match: XP_038887351.1 (glucan endo-1,3-beta-glucosidase 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.5e-93
Identity = 198/264 (75.00%), Postives = 206/264 (78.03%), Query Frame = 0


Query: 3   GHTRELNHEIQKFSSQISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMG 62
           GHTRELNHE QKFSS +STT+RDITTPITTVPTIILSNP  STPFINPTST+DTYSP MG
Sbjct: 53  GHTRELNHENQKFSSPVSTTQRDITTPITTVPTIILSNPTASTPFINPTSTADTYSPVMG 112

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHA 122
           SPKRSSPPSSGASWCIASQSASQKALQIALDYACG+GGTDCSAIQAGQSCYNPNTIHDHA
Sbjct: 113 SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIHDHA 172

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIFH 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTD                               
Sbjct: 173 SYAFNSYYQKNPVPNSCNFGGTAVITSTD------------------------------- 232

Query: 183 CFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQEI 242
                  P+T+    T T       STSSS+LNTTNSKGSTVFGAVPSSPSPSAATCQEI
Sbjct: 233 -------PSTMACQYTST-------STSSSILNTTNSKGSTVFGAVPSSPSPSAATCQEI 270

Query: 243 NVLQQLFLLTMVSLRLLHTNNLHG 267
           NVL QL LLTMVSL LLH+NNLHG
Sbjct: 293 NVL-QLLLLTMVSLILLHSNNLHG 270

[Close]

BLAST of Clc09G24080 vs. NCBI nr
Match: XP_038887352.1 (major pollen allergen Ole e 10-like isoform X2 [Benincasa hispida] >XP_038887353.1 major pollen allergen Ole e 10-like isoform X2 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.5e-93
Identity = 198/264 (75.00%), Postives = 206/264 (78.03%), Query Frame = 0


Query: 3   GHTRELNHEIQKFSSQISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMG 62
           GHTRELNHE QKFSS +STT+RDITTPITTVPTIILSNP  STPFINPTST+DTYSP MG
Sbjct: 19  GHTRELNHENQKFSSPVSTTQRDITTPITTVPTIILSNPTASTPFINPTSTADTYSPVMG 78

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHA 122
           SPKRSSPPSSGASWCIASQSASQKALQIALDYACG+GGTDCSAIQAGQSCYNPNTIHDHA
Sbjct: 79  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQSCYNPNTIHDHA 138

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIFH 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTD                               
Sbjct: 139 SYAFNSYYQKNPVPNSCNFGGTAVITSTD------------------------------- 198

Query: 183 CFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQEI 242
                  P+T+    T T       STSSS+LNTTNSKGSTVFGAVPSSPSPSAATCQEI
Sbjct: 199 -------PSTMACQYTST-------STSSSILNTTNSKGSTVFGAVPSSPSPSAATCQEI 236

Query: 243 NVLQQLFLLTMVSLRLLHTNNLHG 267
           NVL QL LLTMVSL LLH+NNLHG
Sbjct: 259 NVL-QLLLLTMVSLILLHSNNLHG 236

[Close]

BLAST of Clc09G24080 vs. NCBI nr
Match: XP_031744909.1 (glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus] >KAE8646097.1 hypothetical protein Csa_016385 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.9e-89
Identity = 192/266 (72.18%), Postives = 204/266 (76.69%), Query Frame = 0


Query: 2   AGHTRELNHEIQKFSSQ-ISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPA 61
           +GHTRELNHE QKFSS+ +  ++RDITTPITTVPTIILSNP VSTPFINPTSTSDTYSPA
Sbjct: 129 SGHTRELNHENQKFSSRPVFISQRDITTPITTVPTIILSNPTVSTPFINPTSTSDTYSPA 188

Query: 62  MGSPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHD 121
           M SPKRSSPPSSGASWCIASQSASQK LQIALDYACG+GGTDCSAIQAGQ CYNPNTIHD
Sbjct: 189 MESPKRSSPPSSGASWCIASQSASQKVLQIALDYACGYGGTDCSAIQAGQRCYNPNTIHD 248

Query: 122 HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPI 181
           HASYAFNSYYQKNPVPNSCNFGGTAVITSTD                             
Sbjct: 249 HASYAFNSYYQKNPVPNSCNFGGTAVITSTD----------------------------- 308

Query: 182 FHCFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQ 241
                    P+T+    T T       STSSSVLNTTNSKGSTVFGAVPSSP+PSAATCQ
Sbjct: 309 ---------PSTMACQYTST-------STSSSVLNTTNSKGSTVFGAVPSSPTPSAATCQ 349

Query: 242 EINVLQQLFLLTMVSLRLLHTNNLHG 267
           EINVLQ+L LLT+VSLRL H N L+G
Sbjct: 369 EINVLQRLLLLTIVSLRLFHINYLYG 349

[Close]

BLAST of Clc09G24080 vs. NCBI nr
Match: KAG6572453.1 (Glucan endo-1,3-beta-glucosidase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.0 bits (868), Expect = 3.8e-89
Identity = 187/261 (71.65%), Postives = 199/261 (76.25%), Query Frame = 0


Query: 3   GHTRELNHEIQKFSSQISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMG 62
           GHTRELNHE QKFSS +STT+RDITTPITTVPTIILSNP  STPF+NPTSTSDTYSP M 
Sbjct: 34  GHTRELNHENQKFSSPVSTTQRDITTPITTVPTIILSNPTASTPFLNPTSTSDTYSPTME 93

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHA 122
           SPKRSSPP SGASWCIASQSASQ ALQ+ALDYACGHGGTDCSAIQ GQ CYNPNTIH+HA
Sbjct: 94  SPKRSSPPLSGASWCIASQSASQTALQVALDYACGHGGTDCSAIQTGQRCYNPNTIHNHA 153

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIFH 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTD                               
Sbjct: 154 SYAFNSYYQKNPVPNSCNFGGTAVITSTD------------------------------- 213

Query: 183 CFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQEI 242
                  P+T+    T T       STSSS+LNTTNSKGSTVFG VPSSPSPSAATCQEI
Sbjct: 214 -------PSTMACQYTST-------STSSSILNTTNSKGSTVFGGVPSSPSPSAATCQEI 249

Query: 243 NVLQQLFLLTMVSLRLLHTNN 264
           NV+QQL L+TMVSLRLL++NN
Sbjct: 274 NVVQQLLLVTMVSLRLLYSNN 249

[Close]

BLAST of Clc09G24080 vs. NCBI nr
Match: XP_016900361.1 (PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900362.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900363.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 3.8e-89
Identity = 193/265 (72.83%), Postives = 202/265 (76.23%), Query Frame = 0


Query: 3   GHTRELNHEIQKFSSQ-ISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAM 62
           GH REL+HE QKFSS+ + T++RDITTPITTVPTIILSNP  STPFINPTSTSDTYSPAM
Sbjct: 54  GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM 113

Query: 63  GSPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDH 122
            SPKRSSPPSSGASWCIASQSASQKALQIALDYACG+GGTDCSAIQAGQ CYNPNTIHDH
Sbjct: 114 ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH 173

Query: 123 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIF 182
           ASYAFNSYYQKNPVPNSCNFGGTAVITSTD                              
Sbjct: 174 ASYAFNSYYQKNPVPNSCNFGGTAVITSTD------------------------------ 233

Query: 183 HCFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQE 242
                   P+T+    T T       STSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQE
Sbjct: 234 --------PSTMACQYTST-------STSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQE 273

Query: 243 INVLQQLFLLTMVSLRLLHTNNLHG 267
           I VLQQL  LT+VSL LLHTN LHG
Sbjct: 294 IKVLQQLLSLTIVSLTLLHTNYLHG 273

[Close]

BLAST of Clc09G24080 vs. ExPASy Swiss-Prot
Match: Q9ZU91 (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16
Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 71  SSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYY 130
           ++  ++CIA +   +K LQ ALD+ACG G  DCSA+  G+SCY P+ +  H++YAFN+YY
Sbjct: 355 TTNQTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYY 414

Query: 131 QK-NPVPNSCNFGGTAVITSTDP 153
           QK      SC+F G A +T+TDP
Sbjct: 415 QKMGKASGSCDFKGVATVTTTDP 437

[Close]

BLAST of Clc09G24080 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16
Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 27  TTPITTVPTIILSNPA-VSTPFINPTSTSDTYSPAMGSPKRSSPPSSGASWCIASQSASQ 86
           TTP++   +   ++P+  S+P IN  ST        G  K+         WCIAS  AS 
Sbjct: 350 TTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKK---------WCIASSQASV 409

Query: 87  KALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQKNPVPN-SCNFGGT 146
             LQ ALD+ACG G  DCSA+Q  Q C+ P+T+  HASYAFN+YYQ++   +  C+F G 
Sbjct: 410 TELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGA 468

Query: 147 AVITSTDP 153
           +V    DP
Sbjct: 470 SVEVDKDP 468

[Close]

BLAST of Clc09G24080 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 67  SSPPSSGA--SWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASY 126
           S   SSG+  SWCIAS  AS++ L+ ALD+ACG G  DC+AIQ  Q C+ P+T+  HAS+
Sbjct: 358 SGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASF 417

Query: 127 AFNSYYQKNPVPN-SCNFGGTAVITSTDP 153
            FNSY+Q+N   + +C+FGG  V  + DP
Sbjct: 418 VFNSYFQQNRATDVACSFGGAGVKVNKDP 446

[Close]

BLAST of Clc09G24080 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16
Identity = 54/137 (39.42%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 48  INPTSTSDTYSPAMGSPKRSSPPSSGASW------------------------------- 107
           ++P  TS  Y   + +    +PP S ASW                               
Sbjct: 322 LHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTNQTY 381

Query: 108 CIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQK-NPV 153
           CIA      K LQ ALD+ACG G ++CS IQ G+SCY PN +  HAS+AFNSYYQK    
Sbjct: 382 CIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRA 441

[Close]

BLAST of Clc09G24080 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 72  SGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQ 131
           S ASWC+     S   LQ  LDYACG+ G DC+  +  QSC+NP+ +  H +YA NS++Q
Sbjct: 17  SSASWCVCKTGLSDTVLQATLDYACGN-GADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQ 76

Query: 132 -KNPVPNSCNFGGTAVITSTDP-ILFMSFPTA 162
            K   P SCNF GTA  T++DP     +FPT+
Sbjct: 77  KKGQSPGSCNFDGTATPTNSDPSYTGCAFPTS 107

[Close]

BLAST of Clc09G24080 vs. ExPASy TrEMBL
Match: A0A1S4DWJ2 (glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo OX=3656 GN=LOC103489662 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.8e-89
Identity = 193/265 (72.83%), Postives = 202/265 (76.23%), Query Frame = 0


Query: 3   GHTRELNHEIQKFSSQ-ISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAM 62
           GH REL+HE QKFSS+ + T++RDITTPITTVPTIILSNP  STPFINPTSTSDTYSPAM
Sbjct: 54  GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM 113

Query: 63  GSPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDH 122
            SPKRSSPPSSGASWCIASQSASQKALQIALDYACG+GGTDCSAIQAGQ CYNPNTIHDH
Sbjct: 114 ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH 173

Query: 123 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIF 182
           ASYAFNSYYQKNPVPNSCNFGGTAVITSTD                              
Sbjct: 174 ASYAFNSYYQKNPVPNSCNFGGTAVITSTD------------------------------ 233

Query: 183 HCFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQE 242
                   P+T+    T T       STSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQE
Sbjct: 234 --------PSTMACQYTST-------STSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQE 273

Query: 243 INVLQQLFLLTMVSLRLLHTNNLHG 267
           I VLQQL  LT+VSL LLHTN LHG
Sbjct: 294 IKVLQQLLSLTIVSLTLLHTNYLHG 273

[Close]

BLAST of Clc09G24080 vs. ExPASy TrEMBL
Match: A0A0A0K8Y4 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235750 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 9.1e-89
Identity = 190/266 (71.43%), Postives = 204/266 (76.69%), Query Frame = 0


Query: 2   AGHTRELNHEIQKFSSQ-ISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPA 61
           +GHTRELNHE QKFSS+ + T++RDITTPITTVPTIILSNP  STPFINPTSTSDTYSPA
Sbjct: 34  SGHTRELNHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTPSTPFINPTSTSDTYSPA 93

Query: 62  MGSPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHD 121
           M SPKRSSPPSSGASWCIASQ+AS+K LQIALDYACG+GGTDCSAIQAGQ CYNPNTIHD
Sbjct: 94  MESPKRSSPPSSGASWCIASQNASRKVLQIALDYACGYGGTDCSAIQAGQRCYNPNTIHD 153

Query: 122 HASYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPI 181
           HASYAFNSYYQKNPVPNSCNFGGTAVITSTD                             
Sbjct: 154 HASYAFNSYYQKNPVPNSCNFGGTAVITSTD----------------------------- 213

Query: 182 FHCFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQ 241
                    P+T+    T T       STSSSVLNTTNSKGSTVFGAVPSSP+PSAATCQ
Sbjct: 214 ---------PSTMACQYTST-------STSSSVLNTTNSKGSTVFGAVPSSPTPSAATCQ 254

Query: 242 EINVLQQLFLLTMVSLRLLHTNNLHG 267
           EINVLQ+L LLT+VSLRL H N L+G
Sbjct: 274 EINVLQRLLLLTIVSLRLFHINYLYG 254

[Close]

BLAST of Clc09G24080 vs. ExPASy TrEMBL
Match: A0A0A0K3M5 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G251640 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.3e-87
Identity = 188/267 (70.41%), Postives = 201/267 (75.28%), Query Frame = 0


Query: 1   MAGHTRELNHEIQKFSSQ-ISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSP 60
           M GHTRELNHE QKFSS+ +  ++RDITTPITTVPTIILSNP  STPFINPTSTSDTYSP
Sbjct: 1   MTGHTRELNHENQKFSSRPVFISQRDITTPITTVPTIILSNPTPSTPFINPTSTSDTYSP 60

Query: 61  AMGSPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIH 120
           AM SPKRSSPPSSG SWCIASQ+AS+K LQIALDY CG+GGTDCSAIQAGQ CYNPNTIH
Sbjct: 61  AMESPKRSSPPSSGTSWCIASQNASRKVLQIALDYTCGYGGTDCSAIQAGQRCYNPNTIH 120

Query: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMP 180
           DHASYAFNSYYQKNPVPNSCNFGGTAVITSTD                            
Sbjct: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTD---------------------------- 180

Query: 181 IFHCFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATC 240
                     P+T+    T T       STSSSVLNTTNSKGSTVFGAVPSSP+PSAATC
Sbjct: 181 ----------PSTMACEYTST-------STSSSVLNTTNSKGSTVFGAVPSSPTPSAATC 222

Query: 241 QEINVLQQLFLLTMVSLRLLHTNNLHG 267
           QEINVLQ+L LLT+VSLRL H N L+G
Sbjct: 241 QEINVLQRLLLLTIVSLRLFHINYLYG 222

[Close]

BLAST of Clc09G24080 vs. ExPASy TrEMBL
Match: A0A6J1D2V3 (glucan endo-1,3-beta-glucosidase 12-like OS=Momordica charantia OX=3673 GN=LOC111016792 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.7e-82
Identity = 173/251 (68.92%), Postives = 187/251 (74.50%), Query Frame = 0


Query: 3   GHTRELNHEIQKFSSQISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMG 62
           GHTRELNHE +KF+S +STT+RDITTPITTVPTIILSNP  STP INPTSTSD+YSPAM 
Sbjct: 71  GHTRELNHEKKKFNSPVSTTQRDITTPITTVPTIILSNPTASTPLINPTSTSDSYSPAME 130

Query: 63  SPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHA 122
           +PK+SSPPSSG SWCIASQS SQ ALQ+A+DYACG+GG DCSAIQ GQSCYNPNTIHDHA
Sbjct: 131 TPKKSSPPSSGGSWCIASQSVSQTALQVAIDYACGYGGADCSAIQPGQSCYNPNTIHDHA 190

Query: 123 SYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIFH 182
           SYAFNSYYQKNPVPNSCNFGGTAVITSTDP                              
Sbjct: 191 SYAFNSYYQKNPVPNSCNFGGTAVITSTDP------------------------------ 250

Query: 183 CFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQEI 242
                          TM   +   +STSSS+LNTTNSKGSTVFGAVPSSPSPSAA CQEI
Sbjct: 251 --------------STMACQYAS-TSTSSSILNTTNSKGSTVFGAVPSSPSPSAAHCQEI 276

Query: 243 NVLQQLFLLTM 254
           NVLQQL LLT+
Sbjct: 311 NVLQQLLLLTV 276

[Close]

BLAST of Clc09G24080 vs. ExPASy TrEMBL
Match: A0A5A7SSE1 (Glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00020 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 5.4e-81
Identity = 176/243 (72.43%), Postives = 184/243 (75.72%), Query Frame = 0


Query: 1   MAGHTRELNHEIQKFSSQ-ISTTKRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSP 60
           M GH REL+HE QKFSS+ + T++RDITTPITTVPTIILSNP  STPFINPTSTSDTYSP
Sbjct: 1   MTGHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSP 60

Query: 61  AMGSPKRSSPPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIH 120
           AM SPKRSSPPSSGASWCIASQSASQKALQIALDYACG+GGTDCSAIQAGQ CYNPNTIH
Sbjct: 61  AMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIH 120

Query: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMP 180
           DHASYAFNSYYQKNPVPNSCNFGGTAVITSTD                            
Sbjct: 121 DHASYAFNSYYQKNPVPNSCNFGGTAVITSTD---------------------------- 180

Query: 181 IFHCFHLLSFPATIIHVLTMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATC 240
                     P+T+    T T       STSSSVLNTTNSKGSTVFGAVPSSPSPSAATC
Sbjct: 181 ----------PSTMACQYTST-------STSSSVLNTTNSKGSTVFGAVPSSPSPSAATC 198

Query: 241 QEI 243
           QEI
Sbjct: 241 QEI 198

[Close]

BLAST of Clc09G24080 vs. TAIR 10
Match: AT2G30933.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-30
Identity = 91/236 (38.56%), Postives = 119/236 (50.42%), Query Frame = 0


Query: 23  KRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMGSPKRSSPPSSGA-----SWC 82
           ++DITTP+ T       NP  +   + P S SD  + A       S P   A     SWC
Sbjct: 31  EKDITTPLAT-------NPTTTPTTVVPNSDSDASAVATTPLTIPSSPHGVAYPGDQSWC 90

Query: 83  IASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQKNPVPN 142
           +A ++ ++ ALQ ALDYACG GG DCS IQ G +CYNPN++  HAS+AFNSYYQKNP+P+
Sbjct: 91  VARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPS 150

Query: 143 SCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKMPIFHCFHLLSFPATIIHVL 202
           SCNF GTA+  S DP L                S H               FP+T     
Sbjct: 151 SCNFDGTAITISADPSL---------------GSCH---------------FPST----- 210

Query: 203 TMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPS--SPSPSAATCQEINVLQQLFLL 252
                     STS S+LN T+  G  +FG +PS  +P P A+T     ++  L+ L
Sbjct: 211 ----------STSESILNVTSEDGLGLFGRIPSHPTPKPEASTSSSRTLISFLYFL 214

[Close]

BLAST of Clc09G24080 vs. TAIR 10
Match: AT2G30933.2 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-28
Identity = 67/135 (49.63%), Postives = 85/135 (62.96%), Query Frame = 0


Query: 23  KRDITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMGSPKRSSPPSSGA-----SWC 82
           ++DITTP+ T       NP  +   + P S SD  + A       S P   A     SWC
Sbjct: 31  EKDITTPLAT-------NPTTTPTTVVPNSDSDASAVATTPLTIPSSPHGVAYPGDQSWC 90

Query: 83  IASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQKNPVPN 142
           +A ++ ++ ALQ ALDYACG GG DCS IQ G +CYNPN++  HAS+AFNSYYQKNP+P+
Sbjct: 91  VARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPS 150

Query: 143 SCNFGGTAVITSTDP 153
           SCNF GTA+  S DP
Sbjct: 151 SCNFDGTAITISADP 158

[Close]

BLAST of Clc09G24080 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-27
Identity = 60/103 (58.25%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 76  WCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQKNPV 135
           WCIA  +AS  +LQ+ALDYACG+GG DC  IQ G +CY PNTI DHAS+AFNSYYQK+P 
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKHPG 207

Query: 136 PNSCNFGGTAVITSTDPILFMSFPTAIFFQVLWPVSTHPLGKM 179
            +SCNFGG A +TSTDP    S  +  F      VST P  +M
Sbjct: 208 SDSCNFGGAAQLTSTDP----SKGSCHFSSSSGTVSTSPPSQM 246

[Close]

BLAST of Clc09G24080 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.8e-21
Identity = 86/248 (34.68%), Postives = 118/248 (47.58%), Query Frame = 0


Query: 26  ITTPITTVPTIILSNPAVSTPFINPTSTSDTYSPAMGSPKRSSPPS-SGASWCIASQSAS 85
           +T P+T   T    NP    P   P+ T     P +  P  S+ PS SG SWC+A   AS
Sbjct: 90  LTPPVTNPVT----NPVTQYPPTQPSGTVPVPVPVVAPPVVSNSPSVSGQSWCVAKPGAS 149

Query: 86  QKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGT 145
           Q +LQ ALDYACG    DCS +Q G +CY+P ++  HAS+AFNSYYQKNP P SC+FGG 
Sbjct: 150 QVSLQQALDYACGI--ADCSQLQQGGNCYSPISLQSHASFAFNSYYQKNPSPQSCDFGGA 209

Query: 146 AVITSTDPI-------LFMSFPTAIFFQVLWPVSTHPLGKMPIFHCFHLLSFPATIIHVL 205
           A + +T+P           S  T +      P  +      P      ++     II V 
Sbjct: 210 ASLVNTNPSTGSCIYQTGSSTSTPMTAGTTTPTPSTQTVNQPPVTSTPIIPTGGGIIGVG 269

Query: 206 TMTLPFFQLSSTSSSVLNTTNSKGSTVFGAVPSSPSPSAATCQEINVLQQLFLLTMVSLR 265
           T     F  ++ +S+ LN  +S G         SP+ +  T  +   L+  F   MV+  
Sbjct: 270 TPP-AIFNPANPTSNTLNNPSSGGLAGGYGFDGSPNENNPTSSDSTHLKIHFGHAMVATL 329

[Close]

BLAST of Clc09G24080 vs. TAIR 10
Match: AT5G55180.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-20
Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 69  PPSSGASWCIASQSASQKALQIALDYACGHGGTDCSAIQAGQSCYNPNTIHDHASYAFNS 128
           P   G +WC+A+   +++ LQ  LDYACG GG DC  IQ G +CYNP ++  HASYAFNS
Sbjct: 365 PSLVGQTWCVANGKTTKEKLQEGLDYACGEGGADCRPIQPGATCYNPESLEAHASYAFNS 424

Query: 129 YYQKNP-VPNSCNFGGTAVITSTDP 153
           YYQKN     +CNFGG A + S  P
Sbjct: 425 YYQKNARGVGTCNFGGAAYVVSQPP 449

The following BLAST results are available for this feature:

BLAST of Clc09G24080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887351.1	2.5e-93	75.00	glucan endo-1,3-beta-glucosidase 3-like isoform X1 [Benincasa hispida]	[more]
XP_038887352.1	2.5e-93	75.00	major pollen allergen Ole e 10-like isoform X2 [Benincasa hispida] >XP_038887353...	[more]
XP_031744909.1	2.9e-89	72.18	glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus] >KAE8646097.1 h...	[more]
KAG6572453.1	3.8e-89	71.65	Glucan endo-1,3-beta-glucosidase 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_016900361.1	3.8e-89	72.83	PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900362....	[more]

BLAST of Clc09G24080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU91	2.0e-16	48.19	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 ...	[more]
Q8VYE5	2.6e-16	41.41	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]
Q9FJU9	2.6e-16	50.56	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590...	[more]
O65399	2.6e-16	39.42	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q9FNQ2	1.3e-15	46.74	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]

BLAST of Clc09G24080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWJ2	1.8e-89	72.83	glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo OX=3656 GN=LOC103489662 ...	[more]
A0A0A0K8Y4	9.1e-89	71.43	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235750 PE=4 SV=...	[more]
A0A0A0K3M5	1.3e-87	70.41	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G251640 PE=4 SV=...	[more]
A0A6J1D2V3	3.7e-82	68.92	glucan endo-1,3-beta-glucosidase 12-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7SSE1	5.4e-81	72.43	Glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Clc09G24080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30933.1	1.9e-30	38.56	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G30933.2	4.0e-28	49.63	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G29380.1	1.5e-27	58.25	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G09460.1	2.8e-21	34.68	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G55180.1	4.0e-20	52.94	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 75..155 e-value: 3.2E-38 score: 143.0
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 76..145 e-value: 1.2E-20 score: 74.0
None	No IPR available	GENE3D	1.20.58.1040		coord: 71..154 e-value: 2.7E-11 score: 45.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..73
None	No IPR available	PANTHER	PTHR31044:SF53	CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN	coord: 206..246 coord: 38..152
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 38..152
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 206..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G24080.2	Clc09G24080.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds