Clc09G23700 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAAAGTGAAATTCCCAAAATGGACAAACCATTCTCATTTGATTTTGTCTCTCCAATCTCCTCCACCTCCTCATCCTCCTCCCACAAGAAGCCGCCCAGACTATTCGGAATAGAACTAATCAACGTCCCAGCAGAAGCAAAAGACTCTCCAATCACCCGCCTGTGTGGGAATCTGGGCGACAGACCAATGAGAAGCAAGAGTAGAAGAACATTCCATTGCCAATACTGCTTCAAGGAGTTCGCAAACTCACAGGCACTGGGAGGCCACCAAAATGCCCACAAGAAGGAAAGGTTGAAGCAGAAGAAACTCCAAATACAAGCCCAAAATTCCAGCCTTATTCATCATTACCTTCAAAATTATTTTAATTCCCATTTTGCCCATGATTTTGATGGCTCCCACATCAGCTTCACCTTCCGTACCACCGCCGATGTAGATGACTTCCATCATAACCACTGTACGGTTGCCGCATCCGATCCTGCCTCTGCTGCTTCTCAATTTCATCTCTTTCCATTCCTCTAGTTATAATTACACTATGCCCAATGTGTGTATAAGTATAAGGATTTGTTCTTAAAATAAATATTTCTCTTCATTTTGTTTTTATTATTATTATTATTTTTCTTTTTTTTTCATTTCTCATACATCATCAAATCAGTAATATTCTCTTTTTCATTTG AAAGAAAGTGAAATTCCCAAAATGGACAAACCATTCTCATTTGATTTTGTCTCTCCAATCTCCTCCACCTCCTCATCCTCCTCCCACAAGAAGCCGCCCAGACTATTCGGAATAGAACTAATCAACGTCCCAGCAGAAGCAAAAGACTCTCCAATCACCCGCCTGTGTGGGAATCTGGGCGACAGACCAATGAGAAGCAAGAGTAGAAGAACATTCCATTGCCAATACTGCTTCAAGGAGTTCGCAAACTCACAGGCACTGGGAGGCCACCAAAATGCCCACAAGAAGGAAAGGTTGAAGCAGAAGAAACTCCAAATACAAGCCCAAAATTCCAGCCTTATTCATCATTACCTTCAAAATTATTTTAATTCCCATTTTGCCCATGATTTTGATGGCTCCCACATCAGCTTCACCTTCCGTACCACCGCCGATGTAGATGACTTCCATCATAACCACTGTACGGTTGCCGCATCCGATCCTGCCTCTGCTGCTTCTCAATTTCATCTCTTTCCATTCCTCTAGTTATAATTACACTATGCCCAATGTGTGTATAAGTATAAGGATTTGTTCTTAAAATAAATATTTCTCTTCATTTTGTTTTTATTATTATTATTATTTTTCTTTTTTTTTCATTTCTCATACATCATCAAATCAGTAATATTCTCTTTTTCATTTG ATGGACAAACCATTCTCATTTGATTTTGTCTCTCCAATCTCCTCCACCTCCTCATCCTCCTCCCACAAGAAGCCGCCCAGACTATTCGGAATAGAACTAATCAACGTCCCAGCAGAAGCAAAAGACTCTCCAATCACCCGCCTGTGTGGGAATCTGGGCGACAGACCAATGAGAAGCAAGAGTAGAAGAACATTCCATTGCCAATACTGCTTCAAGGAGTTCGCAAACTCACAGGCACTGGGAGGCCACCAAAATGCCCACAAGAAGGAAAGGTTGAAGCAGAAGAAACTCCAAATACAAGCCCAAAATTCCAGCCTTATTCATCATTACCTTCAAAATTATTTTAATTCCCATTTTGCCCATGATTTTGATGGCTCCCACATCAGCTTCACCTTCCGTACCACCGCCGATGTAGATGACTTCCATCATAACCACTGTACGGTTGCCGCATCCGATCCTGCCTCTGCTGCTTCTCAATTTCATCTCTTTCCATTCCTCTAG MDKPFSFDFVSPISSTSSSSSHKKPPRLFGIELINVPAEAKDSPITRLCGNLGDRPMRSKSRRTFHCQYCFKEFANSQALGGHQNAHKKERLKQKKLQIQAQNSSLIHHYLQNYFNSHFAHDFDGSHISFTFRTTADVDDFHHNHCTVAASDPASAASQFHLFPFL Homology
BLAST of Clc09G23700 vs. NCBI nr
Match: XP_038889251.1 (zinc finger protein 5-like [Benincasa hispida]) HSP 1 Score: 204.1 bits (518), Expect = 9.1e-49 Identity = 118/170 (69.41%), Postives = 127/170 (74.71%), Query Frame = 0
BLAST of Clc09G23700 vs. NCBI nr
Match: KAA0038869.1 (zinc finger protein 5 [Cucumis melo var. makuwa] >TYJ96007.1 zinc finger protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 184.9 bits (468), Expect = 5.7e-43 Identity = 114/186 (61.29%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of Clc09G23700 vs. NCBI nr
Match: XP_004143824.1 (zinc finger protein 5 [Cucumis sativus] >KGN51556.2 hypothetical protein Csa_008977 [Cucumis sativus]) HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42 Identity = 108/181 (59.67%), Postives = 124/181 (68.51%), Query Frame = 0
BLAST of Clc09G23700 vs. NCBI nr
Match: XP_023520460.1 (zinc finger protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 153.3 bits (386), Expect = 1.8e-33 Identity = 81/110 (73.64%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of Clc09G23700 vs. NCBI nr
Match: KAG6599021.1 (Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 148.7 bits (374), Expect = 4.5e-32 Identity = 79/111 (71.17%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-14 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.6e-10 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09 Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07 Identity = 41/118 (34.75%), Postives = 57/118 (48.31%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy TrEMBL
Match: A0A5A7TC61 (Zinc finger protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00110 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 2.8e-43 Identity = 114/186 (61.29%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy TrEMBL
Match: A0A0A0KNG0 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G477610 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 8.6e-29 Identity = 71/106 (66.98%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy TrEMBL
Match: A0A6J1DUD1 (zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111024100 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 6.2e-27 Identity = 80/153 (52.29%), Postives = 103/153 (67.32%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy TrEMBL
Match: A0A445DPC9 (C2H2-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g011019 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15 Identity = 65/178 (36.52%), Postives = 89/178 (50.00%), Query Frame = 0
BLAST of Clc09G23700 vs. ExPASy TrEMBL
Match: A0A6P4CTK6 (zinc finger protein 5 OS=Arachis duranensis OX=130453 GN=LOC107481180 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 4.2e-15 Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 0
BLAST of Clc09G23700 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 ) HSP 1 Score: 81.3 bits (199), Expect = 8.3e-16 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of Clc09G23700 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 ) HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Clc09G23700 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-10 Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of Clc09G23700 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of Clc09G23700 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 7.5e-09 Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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