Clc09G23355 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTAACCTCTCCAGATTTCAAATAGAAGTTCGAAAACTTTGTAGCGGTATTATGGCTTACATTTATATGCCTTACCAGAGATTTGTACTTTCTGAAGCTACGCTAAAACAAATTTGATCTAATCATGTAATGTTGCTCAATATATGCAGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTCGATATCCTCCCAACCTGTGTTGTTCAGCTTTGAAAGAGTTTGCTTGCCCTTATGCCGACGATCTCAACGATTTAACAAATGATTGCGCTTCAACCATGTTCAGTTACATTAACCTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGCAAGGTCTAGAATGCCCTGCGCTCCCACCCGCCACTTCAGCTGATATAAATTGGGGCTCGATAACACGTTTGCCATCGTATTCGCTGATCCTCTCGACTGGATTCGTATTGCTGTTTTGGCTATTATGATAAGGTCCAAGTGCCTACCATTTTTTTTCCCCTTCCAATTTGTTACCGTACCTTAAACATGATGGAAACACTGCAATTCTTTATTACCATGTATTTATTATCATAGTTTCATAAGCTAAACTTGTGTATCTATCTACCACTTTGATAGTTGTGGAAAGTGAGTTCTTTTTCATGAGATTGAACTGAAAAGTTCTTGAGGTTTCTGTGTTTTTAATTTGTCAAGGAGACTTGGTGTATTATCATCATATATATATATAGATATTTTTTTTTTTTTGAAATAGTATGATCATATATATAGAGTTTGTGATTTTTTTTCATTTTATTATCTGATGTAATATGGAATGTCTGATAGATATTTAGATAACGATTACTAAAGTTATCATTTAGGGTTGATTTGAAATTTTGGTTTTCTTTTATGTTCATATGAAAATTATTCTATATTTTCTTGATGGCATCCTTTTGCAATTTATATATATATATTTTGAATTAAAATGCATGTTCATGTGTGTGATACAATATTAACTGATGTATATATATGACTTCTTAACAACAATGTTATGAATTTATCCAATAACCTTTTTTTTTTTTTTGGTCAGGTTAAAAGAATTATTAGATTTGAATAGAAGGCAATACTGCAATGGTTTCATTTATGGGTTCCTTTTTGTCGAACGCCAAAGAAATACCACGCTTTATTTAAATAAATTATATCTTTAAGACTTTTATTGGTTGTTTACAATTATAACAAAAAAAAAAAAAAAAATTAAAAATTAAAGTCTCTTTTGATAATCATTTGATTTTTTGTTTTTGAAATTGTGTTTGTTTTCTCTCAATTTTTAAAATAATTTTCATGTTTTATAAGTAAAAGAGTTGAATTCTTAGTCAATTTCAAAAAACAAAAACTAGTTTTTTAAAAAACAACTCTGTTTGATAACCATTTAGTTTATAATTTTTAGATTTTGAAAGTTAAGCCTGATCGAACGGGGAATGGGAGAGGGAGTCGAGAGAGTTTTCTCTCCGTTGACTAAACGCAGATGAGATTACATTCCTTGTATTTGGCCTGCCCCAATAATATATATATATATATATATATATAAACAATTAGTCATTTTGAAAATTTTTATCTCAACGTAATGCATTTATAAGATGTAAATGTTTTTGTATTTAAGACTTTCTTACTTTTTAAACCATGAATATTGTAATATTTAAGTTGAAGGCGGATATTGTAATATTTAAATGGAAAATTATTATAAATATAAAAAATATCAAACTATTTACAAATATAACAAAAAATATTGGAAATGATCAATTTAATATATAAATTTGTATTTGGTTGAGAATAAATTTTTAAAACAACAAACGCAAAATTTTCCCACAAGGAACCTAATTCCCGTGAATTGCTCTTGGGGAATCCTTGCCCCAATCCTTGCAGATAATTTCGTAGGGATGAGAATTGAAATAGGGGCGAAGATCAGACATGAAGCCTTCCCGTCCCTGCCTGCCCCATGGACATCTCTAGTTCCAACTCTAAATTGTTTTGCTTTGTTATCTACATTCTACGAAGCTAAGTTTTGAAAACTAAAAAAAAGTAGGTTTTAAAATTTTGTTTTTGTTTTTAAAATTTGACCAAGAATTTAACTCCTTTACCTTAAGAAAGATGAAAACTATGGTAAGAAATTGAGAGAAAATAGACTTAATTTTCAAAAAACCAAATGGTTATCAAACAAGGTCTAATTGATGTATTAGATATACATTTAAATTTTATGTCAAATATAACCTCAAACTTTCGGACACTAAACTTCATAATTTTAAAAGTTCAAAAATCAAATAGACACAGATATCAAAACATTTCAAATAAATCAAAAGAGAGAATTAAATAAAAAAGGTGAAAGTTTTTGATGAATAGATTAGCAATTAATGGAAGAATTAAGAAACCTATTTGAGTGTTTGGTTATAATGTGTAACTACTCTACTTTTATTTCTCCCTACTTAATTAATTACATTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGAAGTCTCCATTTCTTCTTTGAAACATAAATGTTTATTAAGCTCCAAAGTTGAATAATCAATCCTATAGGCATAGATTATTATGGTTTGTAATTGGTGCTTTTGCAGTTTCTTTTTGCTTCTTCTCTTCTTTCTTGTTTCCTCTGCATCTTCAAGTTTCATATCATTTTCAGGTATATTCTTTTCTGTTTCTTTGAATGGCATTTTCTTGTTCTTTTTGTATTTAGCCTTTTCAATCTTTCCTCTTTTCATGTGTATTTTCAGATGAAATTTTTGAATCTCATACTTCAATGGGAAGGAGGCTCCTTCAAACTAAAAAAGGTTTTCCTTTCTTTTCTTTTTCTTTTCTATACTCTTTCCCATCCTTGTTTAATTCTTTTAGTTCTGTTTTATAATCATTTTGGTCCCATTTAATAACCATTTCGCTTTTTTGTTTTTGTTATTGAAAATTAAGCCTTTAGTCACTACTTTCACTTCCAAATTTCTTCCTTTATTGCCTAATTTTTACCCATAGTTTAAAAAACCAAGCCAAAATTTGAAAACTACAAAAAGTAGCTTTTAAAAATTTATTTTTGTTTTTGAAATTTGGCTAAGATTTCAACCCATTGTACTTAATAAAGATGTAAATCATTATAAGAAATGTGGAGGAAATAGGCTTAATTTTCAAAATTCAAAAACCATGTTAAACATTGGTTAAGATTTGTTTTTTTTTTTAAAACATGTTAAACATGTAGTTAAAAAATAAGAGAATTATAGATAGAGTAGAGATTGTAAACTTAATTTTTAAAGACAATAAACTACAAATAAAATCGTTACGAAATGGGGCTTTAATTTTCTTTTTTATTTTGTTTTCAACCTCAAAGCTTCAAATGTTCTACTTTGGTCAAATTATAAGTTAATTCTTAGATCTTTAGATGTCTAATAGGTCTATGAACCTTAAAAATGTGTTTAGTAAATCTAAAAACTTTCAATTTAGCATTAAATGGATATATATTTTAAAACTCACAAATCTAATGGATACATAAATTATATTGTATGTTTAACCATCCATGGATATTACAAATTGTGAATCTATTAGAAACAAAATTGAATTTATTTTATTTTATTTTTTACTTTTAATACAATAAGTGGGGTATGGAAATTTGAATATCCGACCTCACGAGAAAGGATACATGTCAATTATTACTAAGCTATGCTCATTTTGGCCACAAAATTGTAAATTCAAAAACTTATTTTCACACTCTTAAATGTTTATAATCTAGTGGACCCAAAATTGAAAATTTATCCCCCTTTGATGATTATTTAGTTTTTGAAAATTAAGTTTTATAATCACTACTACTTATACCCATGAATTTCTATGTTTTACTATAACAACTTTCTAATATTTTCAAAACCATACCAAATTTTAAAAAGTAAAAAAAGTATCAAAACGTTTTTTTCTTTTCTTTTTTTTTTTTTTTTCAAATTTCGATAGAAACTCATGTTTCTTTAACAATAATGAAAACTATATAATTGAAAAATTGGAAGAAAATAAACATAAATTTAAAAAAATCGAAAACTAAAAATGTAATCATTACTGTACTCAACCTTAGGAAACCATTAGACATTTTTAGCTTTTAGAGATCTATTAGACACAATTTTGAAAGTTCAAACACTAAGGGTGTGTTTGGTCCACTAAGTAATGTTAACATGTTAGAGTTAGGAAATATATGTTTAGGGTTTAGAATTGTAACATGAAATTCCTCACTAAATGTGCAAAATAGAGAAAAAGAGAAAAATAGAAGATGAAGTTCATTGATAAATGTGCAAACTTCAATAGTATGCACATCAATAGTGTTTACTATTGAAATTGAGTGAACTATATATAAGATCCAATTAAATACCCAACTACAAAAGTAAAGACGTTTTTTCCAACATAAACATAGCTCAATTGACATAAATTATGAACTCTCGACAAAGAGGTCAGGAGTTCAAAACTTCTTTCCACCTCCATCTTTTTTAAACTACTAACCACTAAGGGTTCATTTAATACCTATTTGGTTTTTAGTTTTTTGAACATCTTACTTTTTTTCTTGCAATTTCTTTTTACTATGGTTCTCATTTTCCTCTTTGGTGGGCTTCTTATTTCATTGATCAATGAAATATGTTTGCTTCTCTTTTACGAAACGAAAAGTTAAAATAAATACAATAAACATTTGAATTTTTAACTAAATTCTAAATTTCAAAAATAAGTTTTCAAGATCAATAGTGTTTATAAATTTAATTTTTAAAAATAAAATACCAAATAGCTATCAACGGGAGCAAATAGATTCATTTCTTTCGTTCTTCACCCTTCACCATCTCAAACGTCAAACTTTTGATTTTCTTGCATGTTAGTCACTATCATGAGCCTTGGTGTATACAAAAACTTATAATCGAAGGAATGGGCAAAAATAAAACCTTCACAATTGTTGTAATCTTGGAAGTGCTTATCATTCTTATTCAATTAGACTTGCATTATGAATAAAATTATTAGATTTTGGCTTTCTTGGATTGGCTTTTAAATTGTGCTTATAAACATTTTTTTTTTTTAATTCTTAGAAAGTCAATCTAGACATGTTCTAAATTTATTAAATTGCTCATGAAGGTCCTGTTTCATAATCATTTAATTTTTTATTTTTATTTGTTTGAAAAATTAAACCTACAGACATCATTTCCACCTCTAAATATCTAGTTTTTACCAATATTTTTAAAAAGAAAAAAATTTATGTGCAGTCTAGACTACACTCATCTTTTGTGCAGTCCGGACAATACCCAATAAAAATTTGTCATGTGACAAAAATATTGTAAGAAATTGAGAGGAAATAAACTTAATTTTAAAAAACAAAAAACCAAACAGTTACCAAACGGGCCTAAAAAATCGTTTCCAAGGATAGTCTTGCTTTCATTTTTATCACTATTCTTGTGTTTCAATATCTTCATTTTGACAGATTGCCCTGTTAGCTTTGAATTTTTGAACTACACAATCATCACAAGCAAATGCAAAGGGCCTCTATATTCTCCAAAGCTATGTTGTTCAGCTCTAACCGAACTTGTTTGCCCTTATGTTGATGTTATGAATGATATGACAACTGATTGTGCTTCAACCATGTTTAGCAATATTAACCTCTATGGAAAGTATCCACCTGGCCTTTTCTCGAGCCAGTGTCGCGAAGGAGTCAAAGGTCTTGCCTGCCCTCCATTGCCACCTCCATCTGACTCGAACTCAGCTTTGCTCTTGAAACGTTCGTCTCCTTCAATCATCATTGCCTCAGCTGGAGTTGTACTTCTGCTTTTATCGCTTTTGTGA ATGCTTAACCTCTCCAGATTTCAAATAGAAGTTCGAAAACTTTGTAGCGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTCGATATCCTCCCAACCTGTGTTGTTCAGCTTTGAAAGAGTTTGCTTGCCCTTATGCCGACGATCTCAACGATTTAACAAATGATTGCGCTTCAACCATGTTCAGTTACATTAACCTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGCAAGGTCTAGAATGCCCTGCGCTCCCACCCGCCACTTCAGCTGATATAAATTGGGGCTCGATAACACATTGCCCTGTTAGCTTTGAATTTTTGAACTACACAATCATCACAAGCAAATGCAAAGGGCCTCTATATTCTCCAAAGCTATGTTGTTCAGCTCTAACCGAACTTGTTTGCCCTTATGTTGATGTTATGAATGATATGACAACTGATTGTGCTTCAACCATGTTTAGCAATATTAACCTCTATGGAAAGTATCCACCTGGCCTTTTCTCGAGCCAGTGTCGCGAAGGAGTCAAAGGTCTTGCCTGCCCTCCATTGCCACCTCCATCTGACTCGAACTCAGCTTTGCTCTTGAAACGTTCGTCTCCTTCAATCATCATTGCCTCAGCTGGAGTTGTACTTCTGCTTTTATCGCTTTTGTGA ATGCTTAACCTCTCCAGATTTCAAATAGAAGTTCGAAAACTTTGTAGCGCTTGTCCAGTGAACTTTGAATTCTTGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTCGATATCCTCCCAACCTGTGTTGTTCAGCTTTGAAAGAGTTTGCTTGCCCTTATGCCGACGATCTCAACGATTTAACAAATGATTGCGCTTCAACCATGTTCAGTTACATTAACCTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGCAAGGTCTAGAATGCCCTGCGCTCCCACCCGCCACTTCAGCTGATATAAATTGGGGCTCGATAACACATTGCCCTGTTAGCTTTGAATTTTTGAACTACACAATCATCACAAGCAAATGCAAAGGGCCTCTATATTCTCCAAAGCTATGTTGTTCAGCTCTAACCGAACTTGTTTGCCCTTATGTTGATGTTATGAATGATATGACAACTGATTGTGCTTCAACCATGTTTAGCAATATTAACCTCTATGGAAAGTATCCACCTGGCCTTTTCTCGAGCCAGTGTCGCGAAGGAGTCAAAGGTCTTGCCTGCCCTCCATTGCCACCTCCATCTGACTCGAACTCAGCTTTGCTCTTGAAACGTTCGTCTCCTTCAATCATCATTGCCTCAGCTGGAGTTGTACTTCTGCTTTTATCGCTTTTGTGA MLNLSRFQIEVRKLCSACPVNFEFLNYTIITSKCKGPRYPPNLCCSALKEFACPYADDLNDLTNDCASTMFSYINLYGKYPPGLFSSECKEGKQGLECPALPPATSADINWGSITHCPVSFEFLNYTIITSKCKGPLYSPKLCCSALTELVCPYVDVMNDMTTDCASTMFSNINLYGKYPPGLFSSQCREGVKGLACPPLPPPSDSNSALLLKRSSPSIIIASAGVVLLLLSLL Homology
BLAST of Clc09G23355 vs. NCBI nr
Match: XP_002531773.2 (GPI-anchored protein LLG1 [Ricinus communis]) HSP 1 Score: 306.6 bits (784), Expect = 1.8e-79 Identity = 143/218 (65.60%), Postives = 171/218 (78.44%), Query Frame = 0
BLAST of Clc09G23355 vs. NCBI nr
Match: XP_031105626.1 (GPI-anchored protein LLG1-like [Ipomoea triloba]) HSP 1 Score: 283.5 bits (724), Expect = 1.7e-72 Identity = 135/237 (56.96%), Postives = 165/237 (69.62%), Query Frame = 0
BLAST of Clc09G23355 vs. NCBI nr
Match: OVA01383.1 (hypothetical protein BVC80_437g4 [Macleaya cordata]) HSP 1 Score: 262.3 bits (669), Expect = 4.0e-66 Identity = 139/301 (46.18%), Postives = 164/301 (54.49%), Query Frame = 0
BLAST of Clc09G23355 vs. NCBI nr
Match: KAF3565159.1 (hypothetical protein DY000_02017361, partial [Brassica cretica]) HSP 1 Score: 257.7 bits (657), Expect = 9.8e-65 Identity = 118/181 (65.19%), Postives = 135/181 (74.59%), Query Frame = 0
BLAST of Clc09G23355 vs. NCBI nr
Match: TXG68121.1 (hypothetical protein EZV62_009396 [Acer yangbiense]) HSP 1 Score: 242.3 bits (617), Expect = 4.3e-60 Identity = 124/244 (50.82%), Postives = 153/244 (62.70%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy Swiss-Prot
Match: Q9FKT1 (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 3.8e-43 Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy Swiss-Prot
Match: Q6NLF4 (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32 Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy Swiss-Prot
Match: Q9M0I0 (GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 5.1e-32 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy Swiss-Prot
Match: B3GS44 (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 9.6e-31 Identity = 55/101 (54.46%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy TrEMBL
Match: A0A200PT35 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_437g4 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.9e-66 Identity = 139/301 (46.18%), Postives = 164/301 (54.49%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy TrEMBL
Match: A0A5C7IG61 (CRAL-TRIO domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_009396 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 2.1e-60 Identity = 124/244 (50.82%), Postives = 153/244 (62.70%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy TrEMBL
Match: A0A0A0K362 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G186190 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.9e-50 Identity = 91/102 (89.22%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy TrEMBL
Match: A0A6J1IFC4 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111476731 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 5.6e-50 Identity = 94/115 (81.74%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of Clc09G23355 vs. ExPASy TrEMBL
Match: A0A6J1F8E1 (GPI-anchored protein LLG1 OS=Cucurbita moschata OX=3662 GN=LOC111443044 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 5.6e-50 Identity = 94/115 (81.74%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of Clc09G23355 vs. TAIR 10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 ) HSP 1 Score: 176.4 bits (446), Expect = 2.7e-44 Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 0
BLAST of Clc09G23355 vs. TAIR 10
Match: AT4G28280.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 ) HSP 1 Score: 142.5 bits (358), Expect = 4.3e-34 Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of Clc09G23355 vs. TAIR 10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2 ) HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33 Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Clc09G23355 vs. TAIR 10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 ) HSP 1 Score: 139.4 bits (350), Expect = 3.6e-33 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of Clc09G23355 vs. TAIR 10
Match: AT4G26466.1 (lorelei ) HSP 1 Score: 135.2 bits (339), Expect = 6.8e-32 Identity = 55/101 (54.46%), Postives = 73/101 (72.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|