Clc09G22030 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G22030
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Chlorophyll A-B binding protein
Location	ClcChr09: 35399081 .. 35399990 (-)
RNA-Seq Expression	Clc09G22030
Synteny	Clc09G22030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAACAAAAAAAACCCACTAATTTAAAGAAAGCGAAAAAAAAATACAAAAAGAAAAACGCAAAAATATAAGGCTCAAACGGTTACAGCGAGAGAGGGGCGAGCTTATCCTCGAGCTCAGATTTCTCCTTCCATGGCGGCAATTCCATCTTCCTCCTTGAAATTCCCTAACTCTCTCGCACTACCTTCCAATTCAAAGCCTCACAAGCCGAAGCCTCTCACCTTCGTAACTAGAGCAGCAGATCCGGAATCTCCTGCCGCCGATCCAGAATCTGGATCGGACGGCGACGATTTCGAGGACCGACTGGCCAAGGTCCGACTCCGATACCGAAGTGGAACAGGAAAGAAAGCAGAGATACGGAAGGCTCGGAAGTCCAAGAAAGGATCCAACGCCTCCGCCTCGTCGGTGTACCTACCGCCAGTGCCGTTGAAGGAGGCGGTTTCCGGCGGACTTAAAGTGGAATTCGGATTCAGCCCGTACAGTGAGAGGATGAATGGATGGATTGCGATACTCGGAATATCGGCGCTGGTTCTGGTGGAATTGGCTACCGGAAAAGGCGTCATCAATTACCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTAGCGGCGGTTGCTGCTCTATATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGATGAAATAAAAAATTAGAATGAAGCTTTAACGATTCAGTAATTTTTTTTCTTCTTTTGCCTGTGTTTTTTGAATTTCCACCTTTCTTTTCTTCTTTACTTGACATCGAACCAATGCTTTTGAGTTATGTATGAATGAACATGAGAAATATGCATTATTGAAAGGAAGTAACATTATTATTATTCTATGTTATTTTGAAGCTCCATGAGAACATGGAAGGAGGCTAAGATTTTAA

mRNA sequence

AAAAAAAAAAACAAAAAAAACCCACTAATTTAAAGAAAGCGAAAAAAAAATACAAAAAGAAAAACGCAAAAATATAAGGCTCAAACGGTTACAGCGAGAGAGGGGCGAGCTTATCCTCGAGCTCAGATTTCTCCTTCCATGGCGGCAATTCCATCTTCCTCCTTGAAATTCCCTAACTCTCTCGCACTACCTTCCAATTCAAAGCCTCACAAGCCGAAGCCTCTCACCTTCGTAACTAGAGCAGCAGATCCGGAATCTCCTGCCGCCGATCCAGAATCTGGATCGGACGGCGACGATTTCGAGGACCGACTGGCCAAGGTCCGACTCCGATACCGAAGTGGAACAGGAAAGAAAGCAGAGATACGGAAGGCTCGGAAGTCCAAGAAAGGATCCAACGCCTCCGCCTCGTCGGTGTACCTACCGCCAGTGCCGTTGAAGGAGGCGGTTTCCGGCGGACTTAAAGTGGAATTCGGATTCAGCCCGTACAGTGAGAGGATGAATGGATGGATTGCGATACTCGGAATATCGGCGCTGGTTCTGGTGGAATTGGCTACCGGAAAAGGCGTCATCAATTACCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTAGCGGCGGTTGCTGCTCTATATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGATGAAATAAAAAATTAGAATGAAGCTTTAACGATTCAGTAATTTTTTTTCTTCTTTTGCCTGTGTTTTTTGAATTTCCACCTTTCTTTTCTTCTTTACTTGACATCGAACCAATGCTTTTGAGTTATGTATGAATGAACATGAGAAATATGCATTATTGAAAGGAAGTAACATTATTATTATTCTATGTTATTTTGAAGCTCCATGAGAACATGGAAGGAGGCTAAGATTTTAA

Coding sequence (CDS)

ATGGCGGCAATTCCATCTTCCTCCTTGAAATTCCCTAACTCTCTCGCACTACCTTCCAATTCAAAGCCTCACAAGCCGAAGCCTCTCACCTTCGTAACTAGAGCAGCAGATCCGGAATCTCCTGCCGCCGATCCAGAATCTGGATCGGACGGCGACGATTTCGAGGACCGACTGGCCAAGGTCCGACTCCGATACCGAAGTGGAACAGGAAAGAAAGCAGAGATACGGAAGGCTCGGAAGTCCAAGAAAGGATCCAACGCCTCCGCCTCGTCGGTGTACCTACCGCCAGTGCCGTTGAAGGAGGCGGTTTCCGGCGGACTTAAAGTGGAATTCGGATTCAGCCCGTACAGTGAGAGGATGAATGGATGGATTGCGATACTCGGAATATCGGCGCTGGTTCTGGTGGAATTGGCTACCGGAAAAGGCGTCATCAATTACCATACGCCGGCGATTATACTGATTCAAGTGTATTTTGTAGCGGCGGTTGCTGCTCTATATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGATGAAATAAAAAATTAG

Protein sequence

MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPESGSDGDDFEDRLAKVRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSERMNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPDEIKN

Homology

[Close]

BLAST of Clc09G22030 vs. NCBI nr
Match: XP_022133568.1 (uncharacterized protein LOC111006119 [Momordica charantia])

HSP 1 Score: 317.8 bits (813), Expect = 6.3e-83
Identity = 166/186 (89.25%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPESGSDGDDFEDRLAK 60
           MAAIPSSSL+FPNSL  PSNSKPHK KPLTFVTRAADPE+PAADPE GSDGDDFE+RLAK
Sbjct: 1   MAAIPSSSLQFPNSLPFPSNSKPHKTKPLTFVTRAADPETPAADPEPGSDGDDFENRLAK 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSNASA--SSVYLPPVPLKEAVSGGLKVEFGFSPYSE 120
           VRL+YRSGTGKKAEIRKARKS KGS A A  SSVYLPPVPLKEAVSGGLKVEFGFSP+SE
Sbjct: 61  VRLKYRSGTGKKAEIRKARKSNKGSTAGAGGSSVYLPPVPLKEAVSGGLKVEFGFSPFSE 120

Query: 121 RMNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWP 180
           R+NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAA+Y+K+EKEKVSVWP
Sbjct: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAAVYVKFEKEKVSVWP 180

Query: 181 PDEIKN 185
           P+E+KN
Sbjct: 181 PEEVKN 186

[Close]

BLAST of Clc09G22030 vs. NCBI nr
Match: XP_038890345.1 (uncharacterized protein LOC120079944 [Benincasa hispida])

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 170/184 (92.39%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPESGSDGDDFEDRLAK 60
           MAAIPSSSL+FPNSL L     P KPK LTFVTRAADPESPAAD ESGSDGDDFEDRLAK
Sbjct: 1   MAAIPSSSLQFPNSLTL-----PRKPKLLTFVTRAADPESPAADSESGSDGDDFEDRLAK 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSERM 120
           VRLRYRSGTGKKAEIRKARKSKKGS A+ SSVYLPPVPLKEAVSGGLKVEFGFSPYSER+
Sbjct: 61  VRLRYRSGTGKKAEIRKARKSKKGSTAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120

Query: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 180
           NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD
Sbjct: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 179

Query: 181 EIKN 185
           EIKN
Sbjct: 181 EIKN 179

[Close]

BLAST of Clc09G22030 vs. NCBI nr
Match: XP_004149820.1 (uncharacterized protein LOC101221723 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 164/185 (88.65%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPES-GSDGDDFEDRLA 60
           MAAIPSSSL+FPNSL LPSNSKP KPK LTF+TRAADPESPA D E  GSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKPPKPKLLTFLTRAADPESPAGDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR+RYRSGTGKKAEIRKARKSK+GS  +ASSVYLPPV LKEAVSGGLKVEFGFSPYSER
Sbjct: 61  KVRIRYRSGTGKKAEIRKARKSKQGSTTAASSVYLPPVSLKEAVSGGLKVEFGFSPYSER 120

Query: 121 MNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           +NGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPS 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Clc09G22030 vs. NCBI nr
Match: XP_023550096.1 (uncharacterized protein LOC111808391 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.1 bits (780), Expect = 4.2e-79
Identity = 164/184 (89.13%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPESGSDGDDFEDRLAK 60
           MAAIPSSSL+FPNSLA  SNSKPHKPK LTFVTRAADPESPAAD E  SDGDDFEDRLA 
Sbjct: 1   MAAIPSSSLQFPNSLAFASNSKPHKPKSLTFVTRAADPESPAADSEPRSDGDDFEDRLA- 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSERM 120
            RL+ R GTGKKAEIRKARKS+KGS A+ASSVYLPPVPLKEAVSGGLKVEFGFSPYSER+
Sbjct: 61  -RLQLRRGTGKKAEIRKARKSRKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120

Query: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 180
           NGWIAILG+SALVLVELATGKGVINYHTPAIILIQVYFVAA AALYIKYEKEKVSVWP D
Sbjct: 121 NGWIAILGLSALVLVELATGKGVINYHTPAIILIQVYFVAAAAALYIKYEKEKVSVWPQD 180

Query: 181 EIKN 185
           EIK+
Sbjct: 181 EIKS 182

[Close]

BLAST of Clc09G22030 vs. NCBI nr
Match: TYK05751.1 (uncharacterized protein E5676_scaffold98G002400 [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78
Identity = 162/185 (87.57%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPES-GSDGDDFEDRLA 60
           MAAIPSSSL+FPNSL LPSNSK HKP+ LTF+TRAADPES  +D E  GSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR RYRSGTGKKAEIRKARKSKKGS  +ASSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61  KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120

Query: 121 MNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           +NGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPR 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Clc09G22030 vs. ExPASy TrEMBL
Match: A0A6J1BZH5 (uncharacterized protein LOC111006119 OS=Momordica charantia OX=3673 GN=LOC111006119 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.0e-83
Identity = 166/186 (89.25%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPESGSDGDDFEDRLAK 60
           MAAIPSSSL+FPNSL  PSNSKPHK KPLTFVTRAADPE+PAADPE GSDGDDFE+RLAK
Sbjct: 1   MAAIPSSSLQFPNSLPFPSNSKPHKTKPLTFVTRAADPETPAADPEPGSDGDDFENRLAK 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSNASA--SSVYLPPVPLKEAVSGGLKVEFGFSPYSE 120
           VRL+YRSGTGKKAEIRKARKS KGS A A  SSVYLPPVPLKEAVSGGLKVEFGFSP+SE
Sbjct: 61  VRLKYRSGTGKKAEIRKARKSNKGSTAGAGGSSVYLPPVPLKEAVSGGLKVEFGFSPFSE 120

Query: 121 RMNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWP 180
           R+NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAA+Y+K+EKEKVSVWP
Sbjct: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAAVYVKFEKEKVSVWP 180

Query: 181 PDEIKN 185
           P+E+KN
Sbjct: 181 PEEVKN 186

[Close]

BLAST of Clc09G22030 vs. ExPASy TrEMBL
Match: A0A0A0KS45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505130 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 164/185 (88.65%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPES-GSDGDDFEDRLA 60
           MAAIPSSSL+FPNSL LPSNSKP KPK LTF+TRAADPESPA D E  GSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKPPKPKLLTFLTRAADPESPAGDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR+RYRSGTGKKAEIRKARKSK+GS  +ASSVYLPPV LKEAVSGGLKVEFGFSPYSER
Sbjct: 61  KVRIRYRSGTGKKAEIRKARKSKQGSTTAASSVYLPPVSLKEAVSGGLKVEFGFSPYSER 120

Query: 121 MNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           +NGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPS 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Clc09G22030 vs. ExPASy TrEMBL
Match: A0A5D3C1D6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002400 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78
Identity = 162/185 (87.57%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPES-GSDGDDFEDRLA 60
           MAAIPSSSL+FPNSL LPSNSK HKP+ LTF+TRAADPES  +D E  GSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR RYRSGTGKKAEIRKARKSKKGS  +ASSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61  KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120

Query: 121 MNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           +NGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPR 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Clc09G22030 vs. ExPASy TrEMBL
Match: A0A1S3CJX9 (uncharacterized protein LOC103501667 OS=Cucumis melo OX=3656 GN=LOC103501667 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.8e-78
Identity = 161/185 (87.03%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPES-GSDGDDFEDRLA 60
           MAAIPSSSL+FPNSL LPSNSK HKP+ LTF+TRAADPES  +D E  GSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR RYRSGTGKKAEIRKARKSKKGS  +ASSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61  KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120

Query: 121 MNGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           +NGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAV A+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVTAVYIKYEKEKVSVWPR 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Clc09G22030 vs. ExPASy TrEMBL
Match: A0A6J1JUJ1 (uncharacterized protein LOC111489022 OS=Cucurbita maxima OX=3661 GN=LOC111489022 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.5e-78
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MAAIPSSSLKFPNSLALPSNSKPHKPKPLTFVTRAADPESPAADPESGSDGDDFEDRLAK 60
           MAAIPSSSL+FPNSLAL SNSKPHKPK LTFV RAADPESPAAD E  SDGDDFEDRLA 
Sbjct: 1   MAAIPSSSLQFPNSLALASNSKPHKPKTLTFVIRAADPESPAADSEPRSDGDDFEDRLA- 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSNASASSVYLPPVPLKEAVSGGLKVEFGFSPYSERM 120
            RL+ R GTGKKAEIRKARKS+KGS A+ASSVYLPPVPLKEAVSGGLKVEFGFSPYSER+
Sbjct: 61  -RLQLRRGTGKKAEIRKARKSRKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120

Query: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 180
           NGWIAILG+ ALVLVELATGKGVINYHTPAIILIQ YFVAA AALYIKYEKEKVSVWP D
Sbjct: 121 NGWIAILGLWALVLVELATGKGVINYHTPAIILIQAYFVAAAAALYIKYEKEKVSVWPQD 180

Query: 181 EIKN 185
           EIK+
Sbjct: 181 EIKS 182

[Close]

BLAST of Clc09G22030 vs. TAIR 10
Match: AT3G12345.1 (unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48
Identity = 94/148 (63.51%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 33  TRAADPESPAADPESGSDGDDFEDRLAKVRLRYRSGTGKKAEIRKARKSKKGSNASASSV 92
           T    P+      ESG+D D FE RL+ +RLRYRSGTGKKAE+RK++K   GS +  + +
Sbjct: 39  TEDTQPDPETTQSESGTDPDQFESRLSNIRLRYRSGTGKKAEVRKSKKGSSGSPSKGTGI 98

Query: 93  YLPPVPLKEAVSGGLKVEFGFSPYSERMNGWIAILGISALVLVELATGKGVINYHTPAII 152
           YLPPV LKEAVSGGLKVE GFSP+SER+NG IA LG++AL+LVELATGK V+NYHTP+++
Sbjct: 99  YLPPVSLKEAVSGGLKVEPGFSPFSERINGRIAGLGLTALLLVELATGKSVLNYHTPSVV 158

Query: 153 LIQVYFVAAVAALYIKYEKEKVSVWPPD 181
            +Q+YFVAAV+A+++K EKEKVSVWP D
Sbjct: 159 FLQIYFVAAVSAMFVKIEKEKVSVWPKD 186

The following BLAST results are available for this feature:

BLAST of Clc09G22030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133568.1	6.3e-83	89.25	uncharacterized protein LOC111006119 [Momordica charantia]	[more]
XP_038890345.1	3.1e-82	92.39	uncharacterized protein LOC120079944 [Benincasa hispida]	[more]
XP_004149820.1	2.5e-79	88.65	uncharacterized protein LOC101221723 [Cucumis sativus]	[more]
XP_023550096.1	4.2e-79	89.13	uncharacterized protein LOC111808391 [Cucurbita pepo subsp. pepo]	[more]
TYK05751.1	2.7e-78	87.57	uncharacterized protein E5676_scaffold98G002400 [Cucumis melo var. makuwa]	[more]

BLAST of Clc09G22030 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc09G22030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZH5	3.0e-83	89.25	uncharacterized protein LOC111006119 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0KS45	1.2e-79	88.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505130 PE=4 SV=1	[more]
A0A5D3C1D6	1.3e-78	87.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CJX9	3.8e-78	87.03	uncharacterized protein LOC103501667 OS=Cucumis melo OX=3656 GN=LOC103501667 PE=...	[more]
A0A6J1JUJ1	6.5e-78	88.04	uncharacterized protein LOC111489022 OS=Cucurbita maxima OX=3661 GN=LOC111489022...	[more]

BLAST of Clc09G22030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12345.1	1.1e-48	63.51	unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	PANTHER	PTHR14154:SF15	FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 22..180
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 22..180
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 110..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G22030.1	Clc09G22030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane