Clc09G19400 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G19400
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CCG-binding protein 1
Location	ClcChr09: 32822908 .. 32824334 (-)
RNA-Seq Expression	Clc09G19400
Synteny	Clc09G19400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCAGATATTTTTCAATTATAAAAATCCAATAATTTAATTAATAAATAAATAACACAAATCCCATCCTTATCCATTTTTTTGTTCTCAGCTTCTTCGTCACAATTGCTCTCAATTTTCCGTTTGGTTTCAACGATGGAATCATCCCTTCTCCGTCCCGTTTCATCTCCTTTACTTCTCGAAGCCACAGATCTTCTACTTCGCCGGACCGGTTCCTCTTCCTCTCCGAGATTTTCTTCTACCGTTGTTCGTTGTTCTTCCAAAAGCCATGCTTATATCCCGAAGCTCCAGCCGTTTAGCCGCACCAAGCTCGATCGCGCCATCAAAGAGCCGCCTCTGATTGAGAAATCCGAGAACGAGCTTGCAGGTTTGCCTATTAATTTCTTCAGAGGAAATTCTTTTGTCTTGTGTTTATTCTGATCCTTCCTTCGCGATTCCTTTTAGATTATTGCTCAACGTTGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTACTTCGAACTCAAAGATCTAGAAGTGAGTTTCTACGGATTCTTTATCGATTTCACTTCGAGTTTTTCCGTCAAATTTGATTTCCTCCCCCCCCCCCCCCCCCCCCCAAATCCGACCTAATTTGCTGTTGGAAAGCGTATTTCGAACTCAAATATCTTGAAGTGAGTTTCTAGGGATTCTTAATCGATTTTACTTCCGAGTTTTTCCGTTCTTTCACATTCGATTTCCTTTTTCCTCAAAATCCGACCTAATTTTAATTGAGATTCAATTCAATCAACAAACAGTGATGAATTGTTTATCTGTGTGTGTTAAAATCAGAAAGAATCGCCAAGACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGCGTGAAATCGCTGATCGGATGCTTACACGGGATCGCGGCCATACAGAAGAGGAAAGGAAACGAAAACAAGGGGAAGAAGGAATTGAAGGAGGTGGAAGGAAGAAGAGGGAGGGAGTGTCCGATACCAGATGGATTGCCGAAATCTGCAGAGGAAATAGAAGAAGAAGAGGAAGGGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGAAGCAAAGGTACATTCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGAAACTGAAAATTTCTTAGTTTTAGGGTTTTTATTTTGGCAGATTGAATAGCGAAGTTGATTGATGAATTGCTATGTAAATATTTGTTATATAAAATTTTGTGTATATGTAATTTGTAATTTGATGCGTGTTTTGGTTTTGTTATGTATTTTATTCAGATCTGTTTTGGGTAAAAGGATATGAAGTAGAAGGAAAGTAAAAAAATGAGATTGAATGAAATGTTTGAATCTAGTCTGGATTGAACCTGATAATGCTATTTGTGAAATAAGACTTATCATTATAATTTAGTTTCGATACTA

mRNA sequence

CCCTCAGATATTTTTCAATTATAAAAATCCAATAATTTAATTAATAAATAAATAACACAAATCCCATCCTTATCCATTTTTTTGTTCTCAGCTTCTTCGTCACAATTGCTCTCAATTTTCCGTTTGGTTTCAACGATGGAATCATCCCTTCTCCGTCCCGTTTCATCTCCTTTACTTCTCGAAGCCACAGATCTTCTACTTCGCCGGACCGGTTCCTCTTCCTCTCCGAGATTTTCTTCTACCGTTGTTCGTTGTTCTTCCAAAAGCCATGCTTATATCCCGAAGCTCCAGCCGTTTAGCCGCACCAAGCTCGATCGCGCCATCAAAGAGCCGCCTCTGATTGAGAAATCCGAGAACGAGCTTGCAGATTATTGCTCAACGTTGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTACTTCGAACTCAAAGATCTAGAAAAAGAATCGCCAAGACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGCGTGAAATCGCTGATCGGATGCTTACACGGGATCGCGGCCATACAGAAGAGGAAAGGAAACGAAAACAAGGGGAAGAAGGAATTGAAGGAGGTGGAAGGAAGAAGAGGGAGGGAGTGTCCGATACCAGATGGATTGCCGAAATCTGCAGAGGAAATAGAAGAAGAAGAGGAAGGGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGAAGCAAAGGTACATTCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGAAACTGAAAATTTCTTAGTTTTAGGGTTTTTATTTTGGCAGATTGAATAGCGAAGTTGATTGATGAATTGCTATGTAAATATTTGTTATATAAAATTTTGTGTATATGTAATTTGTAATTTGATGCGTGTTTTGGTTTTGTTATGTATTTTATTCAGATCTGTTTTGGGTAAAAGGATATGAAGTAGAAGGAAAGTAAAAAAATGAGATTGAATGAAATGTTTGAATCTAGTCTGGATTGAACCTGATAATGCTATTTGTGAAATAAGACTTATCATTATAATTTAGTTTCGATACTA

Coding sequence (CDS)

ATGGAATCATCCCTTCTCCGTCCCGTTTCATCTCCTTTACTTCTCGAAGCCACAGATCTTCTACTTCGCCGGACCGGTTCCTCTTCCTCTCCGAGATTTTCTTCTACCGTTGTTCGTTGTTCTTCCAAAAGCCATGCTTATATCCCGAAGCTCCAGCCGTTTAGCCGCACCAAGCTCGATCGCGCCATCAAAGAGCCGCCTCTGATTGAGAAATCCGAGAACGAGCTTGCAGATTATTGCTCAACGTTGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTACTTCGAACTCAAAGATCTAGAAAAAGAATCGCCAAGACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGCGTGAAATCGCTGATCGGATGCTTACACGGGATCGCGGCCATACAGAAGAGGAAAGGAAACGAAAACAAGGGGAAGAAGGAATTGAAGGAGGTGGAAGGAAGAAGAGGGAGGGAGTGTCCGATACCAGATGGATTGCCGAAATCTGCAGAGGAAATAGAAGAAGAAGAGGAAGGGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGAAGCAAAGGTACATTCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGA

Protein sequence

MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGGVKSLIGCLHGIAAIQKRKGNENKGKKELKEVEGRRGRECPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD

Homology

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BLAST of Clc09G19400 vs. NCBI nr
Match: XP_038877912.1 (CCG-binding protein 1 [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 5.0e-97
Identity = 186/207 (89.86%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKLD 60
           MESS+LR VSSPLLL+ TDL LRR G SSSPRFSSTVVRCSSK+HAYIPKL+PFSRTKLD
Sbjct: 1   MESSVLRSVSSPLLLDNTDLHLRRIGLSSSPRFSSTVVRCSSKNHAYIPKLEPFSRTKLD 60

Query: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGGV 120
           RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESP+QEVEKLILQAGGV
Sbjct: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120

Query: 121 KSLIGCLHGIAAIQKRKGNENKGKKELKEVEGRRGRECPIPDGLPKSAEEIEEEEEGRMP 180
           KSLIGCLHGI AIQKRKG E + +K  K VEG RGRECPIPDGLPKSAEEIEEEEEGRMP
Sbjct: 121 KSLIGCLHGITAIQKRKGKEKETRKPWKGVEG-RGRECPIPDGLPKSAEEIEEEEEGRMP 180

Query: 181 DSPFTRLLRSKGTFPAWYSPAPDHETD 208
           DSPFTRLLRSKG FPAWYSPAPDHETD
Sbjct: 181 DSPFTRLLRSKGAFPAWYSPAPDHETD 206

[Close]

BLAST of Clc09G19400 vs. NCBI nr
Match: XP_023512041.1 (CCG-binding protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 178/207 (85.99%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKLD 60
           MESSLLR VSSPLLLE+TD LLRR GS SSPRF STVVRCSS+SHA IPKL+PFSRTKLD
Sbjct: 1   MESSLLRSVSSPLLLESTD-LLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLD 60

Query: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGGV 120
           RAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKDLEKESP+QEVEKLILQAGGV
Sbjct: 61  RAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120

Query: 121 KSLIGCLHGIAAIQKRKGNENKGKKELKEVEGRRGRECPIPDGLPKSAEEIEEEEEGRMP 180
           KSLIG LHGIA I KRK +EN+ KK L  VE RR R+CPIPDGLPKSAEEIEEEE  RMP
Sbjct: 121 KSLIGLLHGIAGIHKRKESENEAKKPLNGVE-RRVRDCPIPDGLPKSAEEIEEEEGARMP 180

Query: 181 DSPFTRLLRSKGTFPAWYSPAPDHETD 208
           DSPFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 DSPFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Clc09G19400 vs. NCBI nr
Match: XP_022943281.1 (CCG-binding protein 1 [Cucurbita moschata] >KAG6571149.1 CCG-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010960.1 CCG-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.8 bits (878), Expect = 2.0e-90
Identity = 177/207 (85.51%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKLD 60
           MESSLLR  SSPLLLE+TD LLRR GS SSPRF STVVRCSS+SHA IPKL+PFSRTKLD
Sbjct: 1   MESSLLRSASSPLLLESTD-LLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLD 60

Query: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGGV 120
           RAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKDLEKESP+QEVEKLILQAGGV
Sbjct: 61  RAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120

Query: 121 KSLIGCLHGIAAIQKRKGNENKGKKELKEVEGRRGRECPIPDGLPKSAEEIEEEEEGRMP 180
           KSLIG LHGIA I KRK +EN+ KK L  VE RR R+CPIPDGLPKSAEEIEEEE  RMP
Sbjct: 121 KSLIGLLHGIAGIHKRKESENEAKKPLNRVE-RRVRDCPIPDGLPKSAEEIEEEEGARMP 180

Query: 181 DSPFTRLLRSKGTFPAWYSPAPDHETD 208
           DSPFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 DSPFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Clc09G19400 vs. NCBI nr
Match: XP_022986608.1 (CCG-binding protein 1 [Cucurbita maxima])

HSP 1 Score: 341.7 bits (875), Expect = 4.6e-90
Identity = 176/207 (85.02%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKLD 60
           MESS LR VSSPLLLE+TD LLRR GS+SSPRF STVVRCSS+SHA IPKL+PFSRTKLD
Sbjct: 1   MESSFLRSVSSPLLLESTD-LLRRIGSASSPRFPSTVVRCSSRSHASIPKLKPFSRTKLD 60

Query: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGGV 120
           RAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKDLEKESP+QEVEKLILQAGGV
Sbjct: 61  RAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120

Query: 121 KSLIGCLHGIAAIQKRKGNENKGKKELKEVEGRRGRECPIPDGLPKSAEEIEEEEEGRMP 180
           KSLIG LHGIA I K+K +EN+ KK L  VE RR R+CPIPDGLPKSAEEIEEEE  RMP
Sbjct: 121 KSLIGLLHGIAGIHKKKESENEAKKPLNGVE-RRVRDCPIPDGLPKSAEEIEEEEGARMP 180

Query: 181 DSPFTRLLRSKGTFPAWYSPAPDHETD 208
           DSPFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 DSPFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Clc09G19400 vs. NCBI nr
Match: XP_004153261.1 (CCG-binding protein 1 [Cucumis sativus] >KGN61745.1 hypothetical protein Csa_006358 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 1.0e-89
Identity = 178/209 (85.17%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGS-SSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKL 60
           M+SSLLR +SSPLLLE+ DL LRR GS SSSP  SS VVR SSKSH+YIPKLQPFSR+KL
Sbjct: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60

Query: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGG 120
           DRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+DLEKESP+QEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCLHGIAAIQKRKGNENKGKKE-LKEVEGRRGRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGC+HGI AIQK KG E + +K   KEVEGR  RECPIPDGLPKSAEEIEEEEEGR
Sbjct: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYSPAPDHETD 208
           MPDS FTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

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BLAST of Clc09G19400 vs. ExPASy Swiss-Prot
Match: Q9XIM0 (CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.9e-57
Identity = 115/179 (64.25%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 34  SSTVVRCSSKSHAYIPKLQPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWK 93
           S  VVRCSS     +PKL+ FSR K DR +++PPLIEK+E+EL+DYCSTLEGDDSYSCW+
Sbjct: 31  SFPVVRCSSTRD--VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWR 90

Query: 94  AYFELKDLEKESPRQEVEKLILQAGGVKSLIGCLHGIAAIQKRKGNENKGKKEL---KEV 153
           AYFELKDLE+E P+ EVE LILQ GG+KSLIGCLHG+A+++K    +NK K  L   +E 
Sbjct: 91  AYFELKDLEREKPKVEVENLILQTGGLKSLIGCLHGVASMEK----DNKTKNGLHVGEES 150

Query: 154 EGRRGR--ECPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD 208
           +  +G      IPDGLPKS +E+EEEE+ +MPDS FTRLLRSKGT PAW+S APDHETD
Sbjct: 151 DREKGMNLHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

[Close]

BLAST of Clc09G19400 vs. ExPASy TrEMBL
Match: A0A6J1FRB4 (CCG-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448100 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.9e-91
Identity = 177/207 (85.51%), Postives = 188/207 (90.82%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKLD 60
           MESSLLR  SSPLLLE+TD LLRR GS SSPRF STVVRCSS+SHA IPKL+PFSRTKLD
Sbjct: 1   MESSLLRSASSPLLLESTD-LLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLD 60

Query: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGGV 120
           RAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKDLEKESP+QEVEKLILQAGGV
Sbjct: 61  RAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120

Query: 121 KSLIGCLHGIAAIQKRKGNENKGKKELKEVEGRRGRECPIPDGLPKSAEEIEEEEEGRMP 180
           KSLIG LHGIA I KRK +EN+ KK L  VE RR R+CPIPDGLPKSAEEIEEEE  RMP
Sbjct: 121 KSLIGLLHGIAGIHKRKESENEAKKPLNRVE-RRVRDCPIPDGLPKSAEEIEEEEGARMP 180

Query: 181 DSPFTRLLRSKGTFPAWYSPAPDHETD 208
           DSPFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 DSPFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Clc09G19400 vs. ExPASy TrEMBL
Match: A0A6J1JH09 (CCG-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484298 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.2e-90
Identity = 176/207 (85.02%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKLD 60
           MESS LR VSSPLLLE+TD LLRR GS+SSPRF STVVRCSS+SHA IPKL+PFSRTKLD
Sbjct: 1   MESSFLRSVSSPLLLESTD-LLRRIGSASSPRFPSTVVRCSSRSHASIPKLKPFSRTKLD 60

Query: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGGV 120
           RAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKDLEKESP+QEVEKLILQAGGV
Sbjct: 61  RAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120

Query: 121 KSLIGCLHGIAAIQKRKGNENKGKKELKEVEGRRGRECPIPDGLPKSAEEIEEEEEGRMP 180
           KSLIG LHGIA I K+K +EN+ KK L  VE RR R+CPIPDGLPKSAEEIEEEE  RMP
Sbjct: 121 KSLIGLLHGIAGIHKKKESENEAKKPLNGVE-RRVRDCPIPDGLPKSAEEIEEEEGARMP 180

Query: 181 DSPFTRLLRSKGTFPAWYSPAPDHETD 208
           DSPFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 DSPFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Clc09G19400 vs. ExPASy TrEMBL
Match: A0A0A0LIJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237150 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.9e-90
Identity = 178/209 (85.17%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGS-SSSPRFSSTVVRCSSKSHAYIPKLQPFSRTKL 60
           M+SSLLR +SSPLLLE+ DL LRR GS SSSP  SS VVR SSKSH+YIPKLQPFSR+KL
Sbjct: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60

Query: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGG 120
           DRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+DLEKESP+QEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCLHGIAAIQKRKGNENKGKKE-LKEVEGRRGRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGC+HGI AIQK KG E + +K   KEVEGR  RECPIPDGLPKSAEEIEEEEEGR
Sbjct: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYSPAPDHETD 208
           MPDS FTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Clc09G19400 vs. ExPASy TrEMBL
Match: A0A5A7TT03 (CCG-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00750 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.4e-89
Identity = 177/209 (84.69%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSST-VVRCSSKSHAYIPKLQPFSRTKL 60
           MESSLLR +SSPLLLE+TDL LRR GS  S RFSST VVR SSKSH+YIPKL+PFSR+KL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGG 120
           DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKE+P+QEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGCLHGIAAIQKRKGNENKGKKELKE-VEGRRGRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGCLHGI AI K KG E + +K  K  VEGR  +ECPIPDGLPKSAEEIEEEE GR
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYSPAPDHETD 208
           MPDS FTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Clc09G19400 vs. ExPASy TrEMBL
Match: A0A1S3C971 (CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.4e-89
Identity = 177/209 (84.69%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MESSLLRPVSSPLLLEATDLLLRRTGSSSSPRFSST-VVRCSSKSHAYIPKLQPFSRTKL 60
           MESSLLR +SSPLLLE+TDL LRR GS  S RFSST VVR SSKSH+YIPKL+PFSR+KL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPRQEVEKLILQAGG 120
           DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKE+P+QEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGCLHGIAAIQKRKGNENKGKKELKE-VEGRRGRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGCLHGI AI K KG E + +K  K  VEGR  +ECPIPDGLPKSAEEIEEEE GR
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYSPAPDHETD 208
           MPDS FTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Clc09G19400 vs. TAIR 10
Match: AT2G15890.1 (maternal effect embryo arrest 14 )

HSP 1 Score: 221.9 bits (564), Expect = 4.9e-58
Identity = 115/179 (64.25%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 34  SSTVVRCSSKSHAYIPKLQPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWK 93
           S  VVRCSS     +PKL+ FSR K DR +++PPLIEK+E+EL+DYCSTLEGDDSYSCW+
Sbjct: 31  SFPVVRCSSTRD--VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWR 90

Query: 94  AYFELKDLEKESPRQEVEKLILQAGGVKSLIGCLHGIAAIQKRKGNENKGKKEL---KEV 153
           AYFELKDLE+E P+ EVE LILQ GG+KSLIGCLHG+A+++K    +NK K  L   +E 
Sbjct: 91  AYFELKDLEREKPKVEVENLILQTGGLKSLIGCLHGVASMEK----DNKTKNGLHVGEES 150

Query: 154 EGRRGR--ECPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD 208
           +  +G      IPDGLPKS +E+EEEE+ +MPDS FTRLLRSKGT PAW+S APDHETD
Sbjct: 151 DREKGMNLHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

[Close]

BLAST of Clc09G19400 vs. TAIR 10
Match: AT2G15890.2 (maternal effect embryo arrest 14 )

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-46
Identity = 99/174 (56.90%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 34  SSTVVRCSSKSHAYIPKLQPFSRTKLDRAIKEPPLIEKSENELADYCSTLEGDDSYSCWK 93
           S  VVRCSS     +PKL+ FSR K DR +++PPLIEK+E+EL+DYCSTLEGDDSYSCW+
Sbjct: 31  SFPVVRCSSTRD--VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWR 90

Query: 94  AYFELKDLEKESPRQEVEKLILQAGGVKSLIGCLHGIAAIQKRKGNENKGKKELKEVEGR 153
           AYFELKDLE+E P+ EVE LILQ G                           E  + E  
Sbjct: 91  AYFELKDLEREKPKVEVENLILQTG---------------------------EESDREKG 150

Query: 154 RGRECPIPDGLPKSAEEIEEEEEGRMPDSPFTRLLRSKGTFPAWYSPAPDHETD 208
                 IPDGLPKS +E+EEEE+ +MPDS FTRLLRSKGT PAW+S APDHETD
Sbjct: 151 MNLHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 175

The following BLAST results are available for this feature:

BLAST of Clc09G19400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877912.1	5.0e-97	89.86	CCG-binding protein 1 [Benincasa hispida]	[more]
XP_023512041.1	1.2e-90	85.99	CCG-binding protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022943281.1	2.0e-90	85.51	CCG-binding protein 1 [Cucurbita moschata] >KAG6571149.1 CCG-binding protein 1, ...	[more]
XP_022986608.1	4.6e-90	85.02	CCG-binding protein 1 [Cucurbita maxima]	[more]
XP_004153261.1	1.0e-89	85.17	CCG-binding protein 1 [Cucumis sativus] >KGN61745.1 hypothetical protein Csa_006...	[more]

BLAST of Clc09G19400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIM0	6.9e-57	64.25	CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1	[more]

BLAST of Clc09G19400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRB4	9.9e-91	85.51	CCG-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448100 PE=4 SV=1	[more]
A0A6J1JH09	2.2e-90	85.02	CCG-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484298 PE=4 SV=1	[more]
A0A0A0LIJ6	4.9e-90	85.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237150 PE=4 SV=1	[more]
A0A5A7TT03	2.4e-89	84.69	CCG-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29...	[more]
A0A1S3C971	2.4e-89	84.69	CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1	[more]

BLAST of Clc09G19400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15890.1	4.9e-58	64.25	maternal effect embryo arrest 14	[more]
AT2G15890.2	1.1e-46	56.90	maternal effect embryo arrest 14	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..160
IPR037502	CCG-binding protein 1	PANTHER	PTHR36345	CCG-BINDING PROTEIN 1	coord: 4..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G19400.1	Clc09G19400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0010183	pollen tube guidance
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0036033	mediator complex binding