Clc09G19360 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G19360
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L34
LocationClcChr09: 32711787 .. 32717119 (+)
RNA-Seq ExpressionClc09G19360
SyntenyClc09G19360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGGAGCAACCAAAGACTATAAGGGAGTACTTTCAACCCATCTTGCCTGGGACTCAACCCGGGATTGTCAACACTCCCATGAGTGTCAACAATTTTGAATTGAAACCCGATTTTATTCAAATGGCTAGAGCATTACTTTTAAAGGACGTCTCATTGATGATCCTCACAAGCACCTTTGGTCCTTCATTGAGATTTGTAGCACGGTAAAGATTAATGGAGTCACTAATGATGCTATTAGATTGAGACTATTTCCTTTTTCCTTACAGGATTGTGCTAAGAATTAGTTAGAGACCATAAATAGAGATGTACATTTACCCGACCTCGTTTGGACCTACCTCGAAAAAGGTGGAGAATTTCTGATTGGACGGAGAATGAGGAAGAGAGTGGAGAGAAATTTCTCCGCATTAACTAAATGGGGACGGGGATTACATTCCCCGTCCCCGCCCCAATTCCTTGCCTCGCTCTGATGAGGAATATATATATATATATATATATATATATATATATATTTAAGACTTTATTACTTTTAAAACCATAAATGTTATAATATTTAAGATAAAAGGTTTAAACTTGTAATATTTAAATTTAAAATTTTAAAAATTCTAAGATTACATATTTTTATTATATATTTGCATATAAAATATTATTATTTTATTAAGAATTTTTATAGTGTTTATTTTTAATAAAAGAATATATTAAAACTGATCTATTTAATATATAAAATTTATAAGGTTGAGAATAAAATTACAAATTTACAAAATGAATAAATTTACAAATTACCAACGATGAATTTTCCCTTGGGAACCCGATCCCCGCGAACTCCCTACAGGGAATTCTCGCCCTAATCCCAGGGAGGAATTTCGCGGGAATGAGGATTGAAATAGTTCTCCGTCCTGTGGACAACTCTACTCATAAAATGGAAACTTTAAAATAAAAGTGAACTACAATAAAAAAAACTTATTTTTAATAGGTCTATAATTTCTATTTAATTTCCTTGAAAAGAAAGACTATTTTTAATTTAAAAAAAAAAAAAACTATTCCATCTAAATCTCATATATATAAAAAGAGATTTAAATTTCAATCTGAATCTCACACAAAGGAATAAAAATCGATTAAATAAATGTAAATATAAAGAATGTTGTCGGTCCTCCTTCTACTTCACCTAGTTTATGGCTACACGTAGAAGAAAAAAGAACGTATAAGACTAGAAGTTTAGTGAACAACAACAAGTGTGAAAAAAAAAAAGTAAAAATAAACATATGAATTAGTACATCACATAAGAGAAAATGTATACTATAGAGGTAGAAAAAGAAGAAAACAAAGACATTAATGAAATATATATATAAAGAAAAAAAAGAAAAGATACCTTCAAAAGAATTCGTTGCTAAAAGAAAAATATGTTGTTAACAAAATAAAAGAGATAAAGAGATTGGTATAGATATCTCAAACATAATAAAAATGGCATGGACTTGAAAAAGTAATTATACATGCAAATAAAAGAGAGAAAGAATTTAAAAAAAAAATGAAAATAAAAGAGAGAAGGAAGAAAGAAAAGAAAAGAAAGAGAGATAGGTTAGATAATTGGGAGGATAATTTTATGTGTATCACTTTAATTACTAGGAATTTTTTTTTCAAGAGATTTTACGGTGACAAACATATCATCAAATAAGGTATTTATATGTCACCTCTTTAAATATTATGATGTGTCTAGATTTGTTTCTTGAGACATTTTGAATATACAATACGCAATTTTACCAATTTAATTTATTCTCATATGCATTTTTGCAACACCAGTTAGTTTGTATTGAGTGTCTCTCTGTTTATATATTAGTTTAATTGATAAGTTTAATTGGTATATTTATTACTTGTTGGGAATGTTTCCTTCCGAAAAAATATTCTATAACAATCCGGTCTTAATATTCTTTTTTATTTTTTCCCCAACGACTGAATTCAAATTAAAAATTTTATTCTTTTTATTAAATGTTCACTTCGATATGTTTATTTTATTTTTCAACATTTTATGAATGTTAAAATATTGAAAACGAGTTTATGTAACTAAACGATTCTATTTTTTTTTTTAAGAAGAAATAAAGAAAATCATTATAAATAGAAAAAATATCAAACTATTAATAAATATAAAAAAATTCATTATTTATCTGTGATAAATCACTATAGTCTATCGGAGTTTATCGCTAAGCAATAGAAGTCTATGAAAATTTTCGATATTTATAAATAGTTTAACACATTTTGCTATATTTGAAAACAACTAAAGATATAATCATTTATCTATAACCTATTTGAAAATGCATATAAATGTAACTAAAAAAACTACTTTGGAGTTCTTTCTTTTGATTTTAGGAATGTGAAATGTTTTTTTTTTTCAAACAAAAAAATGTGGCTAAACTATTCTCTTCCTATGTCTCCAGCAAATAAATATTTATAAATTTTAATTAATATATAACCTTTTTTACAATTACATCGTACGTATTTTAATTTTTCTTAAAATTTCTATCTCTTCCAATTTGATTAATGTTTCCACTCCATGGTTCTTGTGAGAAATTACAAGAAGCTTTTTAATTTTCAATTTTTCAAATGGATCTTTTCGCAATTGGCAAATTAATGTTGTAAACATTTAAACATCTGCATCACACACGTTTTATAGCTAATTATTTTAAAAAGTTGCATCAATTTAGAAACTTTAATCCCAAAGTTGAGGAACAAAATTTGTAATTTACCTAATTTTAAAATCATTTTCCCTCCCAATAACTTGCGATCGCGAGCGTTGATTCAAACGTCTATCAGCCGTCAGATCTAGGGCATCGAAGACCGAAAAACCCTAATATAGCGATATTCTTCATCCTCTCGTCGGTTCTTTTGTTCCACTCTTACAATTCTTCTGCAATTGCTTTAGAGGGTTCCGACGAGCGGAGAAGATGGTCCAGCGGCTCACTTACCGTAAGCGGCACAGCTATGCCACCAAGTCCAACCAGCACCGCGTCGTCAAAACCCCCGGTAGATTGACATCGTTCTTCTACAATGTCTTGAAGCTTTCTCCGAATTACCTCTCTTATCGTTTGTTGTTTTGATGAAGTTCTTGTATGATTCTGCATTTATTTGCAAGATCTGTTATCTGCTGCTTAATCGGTTATGTGGGATTTGATTCTTAGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCCAGTGGTCCTAAATGCCCTGTCACTGGAAAGAGAATTCAAGGGGTGCGTCGCCCTTTCTTGTCATCATTAAACAAGCTACCTTTGGAGCTGTGGATTTTCATTTTGATTTTTTTTAGTTTCGTTTTCGAGTATTGGGTATTTTGTGGAGTGATTTTTGCAAATTTTTGGCTGGTTGGATTTGGAGGTCTTCATATCTTAATGCTCTTTTGGACGTGGAATTTTTTGAATATCGTAGTTAAACTTGATTTCGCGTATGTTCTGCTTGATTTCTTCGTATGTAACCAATCGCTAAATGTTGGCTTACAGGCGGCCGTTGTTCTTGTTTTGTTTTTCATTTTGATCAAAATCATGTTGGATTTTAGAACTGGTTCTCACATTATTTCCATTTGATTGATTGTTGATATCTGGTGTAATGTGGGTTTTGTTTTAACAGATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGCAGGACTGTAAACCGCGCTTATGGTGGTGTATTGTCTGGTGGTGCTGTTAGAGAGAGGTGTGTTTCTTTGATGTTCATCACTTCATTGCATTTTCATCCAAGTATAGACGGTTGCTTGATCATTTCTAAAGAACTTCTCTTAATGTTGTAGGATTATAAGAGCCTTTTTGGTTGAAGAGCAAAAAATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAACTAGCTGCCAAGAGCTAGAGTGGCTGGTTTGAAAGTACGAACTCGTTTCCATTTTATATATGCTGAGTGAAAATTTTGACTTGGATCAATGACTTTGTTAATTTAAATCATTTTGGAATTAGCTTTGTTTTCTTCCAGTTGCATTAGTTGTTTGAAGTCTCTCCTACTAGAATATTCAGTTTATCATTCTTATTTATGCTGATTTTGCTACATTTATTACGTGCACACATCAAGAATATGGTCTTGAGGTGGCTTGCTTTATTATTCTTCACCATCCTTTAGTGCGTTTTCTCCGTTAGAGAGCTTCCTCAAGACCTAGGTCTCAAACTAAGCCTAAACATCCACAGTCAATTTTAACTTCGGCCTGCAGAGCATCTTGACAATTTAATTAATGAATGGTGTTTGTAGCAACGTTGTTTCTCTTATATAAAGATGCCATACCCTACTTTATGATCCTATGGTAACCAATGGTCATGCATACTGCCTGGGCCCTGGATTCTAATTATGATTCGAAAAACTTAGGTTGTATGTAGATGAAGTCTCTCATTGCACTTCCACCTCGATTAGGTTCTGACATTTTTTTTTTCATGCAAGTTGGAGGGTCCATGTGCAGAAAACTTTGGTGCGTTTGTCTGTATTTTTGGGAAGCACATAGTTATGTCTATGCCTAATAGCCTAAGTTAATATGAGAAAGAGTTCAAAATCCTTCATTATCTATAACGTTGGTCTAATTGTTGTTCCCTTGGATTACCAAGTGAACCTCTTATGATCTTATTGGAGTTATATCATGACATTTTAGATTAAAGCGGTCATTGTTGCCAACATGATCTTCTACTATTTTAGAGGTTAGAGACTTAAATCTCCCACTTTGCATATTGGTTAACTCTAAAGATAAAAGTTATCATGCTCGGAATAGGAATCATAGTTTAAATCTTGACAACAGATAGTTGTGGCCTGCTACCCTAATGACACATCCCAACCGCTGGTAAGTTCCTTGTTCCAATTTCCCATGACTGTCTAAGGGAAGAAATATGTTCATACATACTAAAAATGGGAGATACAATCCTGAATGTTACTTTCGACCATTTATCAGGAGATAAAATATCCGTTCATTCCTATCTATCTAATAATCCCCATCTAGTTTTGCTGTAAAAGCTTGCAGAAAGTTAAAAGAGGAATTGTTACATTTTGTTCTAGTGACATGGGGTTTGTTGTTCTAGTGACATGGGGTTTGGTTAAGTCATTAGTTTACAACATGAATTTCAGGAAAGAGTTAAGACATTGTTTTGGTTGGAATTGATTTCGGGTTGCATTTAATAATGCTGGTTGGATATTTGTTACTCCTGTTGGAGTTCAATTACAATAATTTGCTAAGAGTGAATATGATATGGATCAAAATATCCACAATA

mRNA sequence

ATGGCAGAGGAGCAACCAAAGACTATAAGGGAGTACTTTCAACCCATCTTGCCTGGGACTCAACCCGGGATTGTCAACACTCCCATGAGTGTCAACAATTTTGAATTGAAACCCGATTTTATTCAAATGGCTAGAGCATTACTTTTAAAGGACGTCTCATTGATGATCCTCACAAGCACCTTTGGTCCTTCATTGAGATTTGTAGCACGAGGGTTCCGACGAGCGGAGAAGATGGTCCAGCGGCTCACTTACCGTAAGCGGCACAGCTATGCCACCAAGTCCAACCAGCACCGCGTCGTCAAAACCCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCCAGTGGTCCTAAATGCCCTGTCACTGGAAAGAGAATTCAAGGGATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGCAGGACTGTAAACCGCGCTTATGGTGGTGTATTGTCTGGTGGTGCTGTTAGAGAGAGGATTATAAGAGCCTTTTTGGTTGAAGAGCAAAAAATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAACTAGCTGCCAAGAGCTAGAGTGGCTGGTTTGAAATTGGAGGGTCCATGTGCAGAAAACTTTGGTGCGTTTGTCTGTATTTTTGGGAAGCACATAGTTATGTCTATGCCTAATAGCCTAAGTTAATATGAGAAAGAGTTCAAAATCCTTCATTATCTATAACGTTGGTCTAATTGTTGTTCCCTTGGATTACCAAGTGAACCTCTTATGATCTTATTGGAGTTATATCATGACATTTTAGATTAAAGCGGTCATTGTTGCCAACATGATCTTCTACTATTTTAGAGGTTAGAGACTTAAATCTCCCACTTTGCATATTGGTTAACTCTAAAGATAAAAGTTATCATGCTCGGAATAGGAATCATAGTTTAAATCTTGACAACAGATAGTTGTGGCCTGCTACCCTAATGACACATCCCAACCGCTGGTAAGTTCCTTGTTCCAATTTCCCATGACTGTCTAAGGGAAGAAATATGTTCATACATACTAAAAATGGGAGATACAATCCTGAATGTTACTTTCGACCATTTATCAGGAGATAAAATATCCGTTCATTCCTATCTATCTAATAATCCCCATCTAGTTTTGCTGTAAAAGCTTGCAGAAAGTTAAAAGAGGAATTGTTACATTTTGTTCTAGTGACATGGGGTTTGTTGTTCTAGTGACATGGGGTTTGGTTAAGTCATTAGTTTACAACATGAATTTCAGGAAAGAGTTAAGACATTGTTTTGGTTGGAATTGATTTCGGGTTGCATTTAATAATGCTGGTTGGATATTTGTTACTCCTGTTGGAGTTCAATTACAATAATTTGCTAAGAGTGAATATGATATGGATCAAAATATCCACAATA

Coding sequence (CDS)

ATGGCAGAGGAGCAACCAAAGACTATAAGGGAGTACTTTCAACCCATCTTGCCTGGGACTCAACCCGGGATTGTCAACACTCCCATGAGTGTCAACAATTTTGAATTGAAACCCGATTTTATTCAAATGGCTAGAGCATTACTTTTAAAGGACGTCTCATTGATGATCCTCACAAGCACCTTTGGTCCTTCATTGAGATTTGTAGCACGAGGGTTCCGACGAGCGGAGAAGATGGTCCAGCGGCTCACTTACCGTAAGCGGCACAGCTATGCCACCAAGTCCAACCAGCACCGCGTCGTCAAAACCCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCCAGTGGTCCTAAATGCCCTGTCACTGGAAAGAGAATTCAAGGGATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGCAGGACTGTAAACCGCGCTTATGGTGGTGTATTGTCTGGTGGTGCTGTTAGAGAGAGGATTATAAGAGCCTTTTTGGTTGAAGAGCAAAAAATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAACTAGCTGCCAAGAGCTAG

Protein sequence

MAEEQPKTIREYFQPILPGTQPGIVNTPMSVNNFELKPDFIQMARALLLKDVSLMILTSTFGPSLRFVARGFRRAEKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Homology
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BLAST of Clc09G19360 vs. NCBI nr
Match: KAG6583599.1 (Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.9 bits (616), Expect = 4.7e-60
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 70  RGFRRAEKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQ 129
           RGFRRAEKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQ
Sbjct: 737 RGFRRAEKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQ 796

Query: 130 GIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKA 189
           GIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKA
Sbjct: 797 GIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKA 856

Query: 190 KEKLAAKS 198
           KEKLA+KS
Sbjct: 857 KEKLASKS 864

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BLAST of Clc09G19360 vs. NCBI nr
Match: XP_038893923.1 (60S ribosomal protein L34-like [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 7.0e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

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BLAST of Clc09G19360 vs. NCBI nr
Match: XP_004138175.3 (60S ribosomal protein L34 [Cucumis sativus] >XP_022152880.1 60S ribosomal protein L34 [Momordica charantia] >XP_022922091.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022933946.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022933947.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964734.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964735.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022969674.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022970352.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022973066.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022973072.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_023515397.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023519212.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023520847.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529309.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529311.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_038878407.1 60S ribosomal protein L34-like [Benincasa hispida] >KAG6586008.1 60S ribosomal protein L34, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019300.1 60S ribosomal protein L34 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6587535.1 60S ribosomal protein L34, partial [Cucurbita argyrosperma subsp. sororia] >KAG6589504.1 60S ribosomal protein L34, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021512.1 60S ribosomal protein L34 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-55
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

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BLAST of Clc09G19360 vs. NCBI nr
Match: KAF1869323.1 (hypothetical protein Lal_00018416 [Lupinus albus])

HSP 1 Score: 226.5 bits (576), Expect = 2.0e-55
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0 

Query: 75   AEKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHL 134
            A+KMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHL
Sbjct: 881  AQKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHL 940

Query: 135  RPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA 194
            RPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEK A
Sbjct: 941  RPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQA 1000

Query: 195  AKS 198
            +K+
Sbjct: 1001 SKA 1003

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BLAST of Clc09G19360 vs. NCBI nr
Match: XP_016578358.1 (PREDICTED: 60S ribosomal protein L34 [Capsicum annuum] >PHT46229.1 hypothetical protein CQW23_15387 [Capsicum baccatum] >PHT97967.1 60S ribosomal protein L34 [Capsicum chinense] >KAF3615566.1 60S ribosomal protein L34 [Capsicum annuum] >KAF3669466.1 60S ribosomal protein L34 [Capsicum annuum] >PHT79658.1 60S ribosomal protein L34 [Capsicum annuum])

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIVRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

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BLAST of Clc09G19360 vs. ExPASy Swiss-Prot
Match: P41098 (60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56
Identity = 115/120 (95.83%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Clc09G19360 vs. ExPASy Swiss-Prot
Match: P40590 (60S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.3e-56
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQK KEK AAK+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120

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BLAST of Clc09G19360 vs. ExPASy Swiss-Prot
Match: Q42351 (60S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-54
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of Clc09G19360 vs. ExPASy Swiss-Prot
Match: Q9FE65 (60S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.8e-54
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAK 197
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of Clc09G19360 vs. ExPASy Swiss-Prot
Match: Q9LJW6 (60S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.6e-53
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of Clc09G19360 vs. ExPASy TrEMBL
Match: A0A6J1I6I6 (60S ribosomal protein L34-like OS=Cucurbita maxima OX=3661 GN=LOC111471563 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 7.5e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Clc09G19360 vs. ExPASy TrEMBL
Match: A0A6J1HLN7 (60S ribosomal protein L34-like OS=Cucurbita moschata OX=3662 GN=LOC111464723 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 7.5e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Clc09G19360 vs. ExPASy TrEMBL
Match: A0A6J1DF78 (60S ribosomal protein L34 OS=Momordica charantia OX=3673 GN=LOC111020506 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 7.5e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Clc09G19360 vs. ExPASy TrEMBL
Match: A0A6A5MB67 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00018416 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 9.8e-56
Identity = 118/123 (95.93%), Postives = 122/123 (99.19%), Query Frame = 0 

Query: 75   AEKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHL 134
            A+KMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHL
Sbjct: 881  AQKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHL 940

Query: 135  RPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA 194
            RPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEK A
Sbjct: 941  RPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQA 1000

Query: 195  AKS 198
            +K+
Sbjct: 1001 SKA 1003

[Close]
BLAST of Clc09G19360 vs. ExPASy TrEMBL
Match: A0A2G2WM29 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_15387 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.3e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIVRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Clc09G19360 vs. TAIR 10
Match: AT1G26880.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 214.2 bits (544), Expect = 9.7e-56
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of Clc09G19360 vs. TAIR 10
Match: AT1G69620.1 (ribosomal protein L34 )

HSP 1 Score: 211.8 bits (538), Expect = 4.8e-55
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAK 197
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of Clc09G19360 vs. TAIR 10
Match: AT3G28900.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-54
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 197
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of Clc09G19360 vs. TAIR 10
Match: AT1G26880.2 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-43
Identity = 84/92 (91.30%), Postives = 88/92 (95.65%), Query Frame = 0 

Query: 78  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 137
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 138 EYKRSRLARNRRTVNRAYGGVLSGGAVRERII 170
           EYKRSRL+RNRRTVNRAYGGVLSG AVRER +
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERFV 92

The following BLAST results are available for this feature:
BLAST of Clc09G19360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583599.14.7e-6099.22Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_038893923.17.0e-56100.0060S ribosomal protein L34-like [Benincasa hispida][more]
XP_004138175.31.6e-5599.1760S ribosomal protein L34 [Cucumis sativus] >XP_022152880.1 60S ribosomal protei... [more]
KAF1869323.12.0e-5595.93hypothetical protein Lal_00018416 [Lupinus albus][more]
XP_016578358.12.7e-5597.50PREDICTED: 60S ribosomal protein L34 [Capsicum annuum] >PHT46229.1 hypothetical ... [more]
BLAST of Clc09G19360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P410981.1e-5695.8360S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1[more]
P405904.3e-5695.0060S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1[more]
Q423511.4e-5491.6760S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1[more]
Q9FE656.8e-5491.6060S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1[more]
Q9LJW62.6e-5390.8360S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1[more]
BLAST of Clc09G19360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I6I67.5e-5699.1760S ribosomal protein L34-like OS=Cucurbita maxima OX=3661 GN=LOC111471563 PE=3 ... [more]
A0A6J1HLN77.5e-5699.1760S ribosomal protein L34-like OS=Cucurbita moschata OX=3662 GN=LOC111464723 PE=... [more]
A0A6J1DF787.5e-5699.1760S ribosomal protein L34 OS=Momordica charantia OX=3673 GN=LOC111020506 PE=3 SV... [more]
A0A6A5MB679.8e-5695.93Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00018416 PE=3 SV=1[more]
A0A2G2WM291.3e-5597.50Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_15387 PE=3 SV=1[more]
BLAST of Clc09G19360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G26880.19.7e-5691.67Ribosomal protein L34e superfamily protein [more]
AT1G69620.14.8e-5591.60ribosomal protein L34 [more]
AT3G28900.11.8e-5490.83Ribosomal protein L34e superfamily protein [more]
AT1G26880.22.5e-4391.30Ribosomal protein L34e superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 103..120
score: 53.57
coord: 143..165
score: 44.72
coord: 90..103
score: 59.18
coord: 121..131
score: 50.0
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 78..173
e-value: 1.1E-37
score: 128.2
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 78..197
NoneNo IPR availableGENE3D6.20.370.70coord: 78..114
e-value: 1.1E-21
score: 78.3
NoneNo IPR availableGENE3D6.20.340.10coord: 116..197
e-value: 9.5E-36
score: 123.6
NoneNo IPR availablePANTHERPTHR10759:SF14SUBFAMILY NOT NAMEDcoord: 78..197
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 92..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G19360.1Clc09G19360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome