Clc09G19280 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G19280
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	La-related protein 6C
Location	ClcChr09: 32585523 .. 32589186 (-)
RNA-Seq Expression	Clc09G19280
Synteny	Clc09G19280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAACAAAGATTTATCCTTTATTCATTTAAGTAAGAAAATGGACAACTTTTGTAGAATGATATCGCCACCACAACCATGATGGTTGAAATATTCTTAATCCAATCAAACGCCGATTGTAAGCCCCATTTTTTTAGGAAGAAGAAGCCATTAGAAAGCAAACAGAAAAACAGAGCAGAGCAGAGGGAAGAGGAAAGAGAAGGAAGGCAAAATGGGAAGGCCACATGGTTAAAATACCCACCTTAAAATCGCCAGTCAAATTCGAAACCAACGGCTCTTTGTCACAAAATCCTAGCATCCTTTCAATGGAGCCGCAGATGCATATATTTGGGCGCGAAATATGGCTTGATTTTCAGAGTTCAGTTACTAAACTTCAGGGCAAATCATACAGAGAAAGAGAGAGAGAGAGAGAGAAAAAAAAAAAAAGAAAAGAAAAAAAAGAAAAAAAAAAAGAAAAAAAAAAGGGAGAAAAAAGAGAGTGAGACTTCAATAACCCACCTGCGTTTCAAAACCTACTTCCATTAATCGCTGGAGTAAAAAGGGATTAAAGAATGGCGCAACCAAATTCGGAAGAGAAAGTGAGTGAGAATCCTGAAATGGAGGTCAACAAAGAAGCTATCAATGGCGATGGCGATGATGGAAGTAGTAACAGCAGCATTGCTAATTTGGCCTTCAGATTCAATGCTCAAGCGCCTGAGTTTTTCCCTAGATCGCAAACCCAGATGCCTGTTACTGGCTATTTTCACCCCTATTTCCATTTTCTTGGTGGGGGTCCTGCTACTTCAGATTGGTTCTTTATTGGGGATCAAGAACCAGCCTATTTGATCCCCAATCCCAACATTCCGCTCCCTAATTTCTCTAAGACTGCCCGTTCTGAAGAAATTCAGCAAAAAATCATCAAACAGGTACCCTCTTTTCCATTCCTTTTCATTACATTCTTCCTTCATTGCCGAATGCTCATCCTGTGCTGTGCTCTTGGGGGGATCTTGAATTGTCTAATACATTTATTTTCTTTTATATCTATGCTTCTTGCTGTTTGGTAAATAATAGAATATGCCATTTTAGATACTTTGTGTTAGGTGATATAAATATAATATTAAATTTGTCTTCACCTTTTGGGTCAATCTATGATTTATGATGGTATGAGTTCTGTGTCCAAACCCTTTTTCTTCCCCATTAATATTGATTTTTACTTATTGGGTCTTTTTCTACATATTTCAAGCGAGTGTTAGATAATTTAATATTAAATTTGTCTTCACCCAATCGCTGAAGCTTTTGGGTCAAACAGTGATCTAAATCTGTGCACATGTGACCTGTACTTTAATGTCCATAATTTTCTCCTTGGATTCCTTCTTAATGTGTTTGATATCTCTTTCCTTATGCTTTGAACTCGGTTGGTTACTTGAGAAGTTCTATGTGACTATAATCCCATTTATGTTGTTCAAAGTTGTCTAAGACATTTGTTTTCCTATATATCTATGATTCTAGCTGTTTGGTAAATAAAAGAAAATGTCATTTTAGATACTTTGAACATGTAAGCAGTACCATAATGTCCATTAGTTTTCTCCTCGGATTCCTCCTTAATGTGTGTAATATCTCTTTCTTAATGCTTTGAACTTGGTTTTTTACTGGAGAGTTTGTGAATTTGATGTTCATTAGTTCTAAGTATAATCCTATTTATGTTGTTCAAAGTTGGAATCTAACCAAGACAGTCACCTGAAGCCTACCAAACTTTGAACTTTATACTTTTTCAAGATTATCATCTTATGGATGATTTCAATTTTTACAGGTAGAATATCAGCTCAGTGACATGAGTCTTCTTGCAAATGAGACTCTTGCAAAACACATTAGTAAAGATCCTGATGGTTATGGTATGGCCTTTGGAAGAATATCATTTACGTACATGGATTCTTTAATTCAAGTTTTCAATATATGCTTTAAACTGAAATTCTTTTTGTCCCTTTTTTCCATTCCGTTTTTGAAGTTCCGATTTCTATTCTTTCGTCGACCAAAAAAGTGAAGTCCCTCTCAACCAACAACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTAAGTTCCTAAGAAGAGCATTTGATGTTCTACTCTTATTGGAAAAGAGCTGAATAGTGATTCGATTTTATTTTATTGATCGATCGTAACTTATATCCGGTCTTCTGAAGGTTGTCAGTGCTGATGGGAAGAAAGTTAGACGTAAGCATCCATTCACAGAGAAGGATAAAGAAGAATTGCTGGTAAGATCAGCCATTGTACGAATGATGCAGAACATTTCTCTTTAGCTGCATAGGGAGTAATATTTTGTTCTTCGATTTGCAGGCCCGCTCAGTTGTTGTTGAGAATTTGCCCGAAAATCACTCGCATCACAACCTGGAGAAAATATTTAGTGTGATCGGAAGGTAGTTTCATTGACCTTATGGCTCACTCATATTGTATCGATTTAGATGTCAAAATTGTCTTCACTGAGCATCATTCGTTGGTGATATATGACCAGTGTGAAGACTATCCGAATCTGCCATCCCCCAGAATCGAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAGTAACAAGGTATTGTGAATCATGCTTTACTATAATGTATAATAACCAAGACACTTATCCTCAAAATCTTTTTCTCATTGTTTCTTCATTTGTTTGAAGCTTCATGCACTTGTGGAGTTTGAGACAGGAGAGTTAGCTGAAAGAGCGGTATGCATATATTGTAAACTATAACAGATCGAGTTGCTTGTAATTCAATATTTTTAATGTCTTTTCCACTTCTTTTTGTGCTTACTAGGTGGAGCAGTTAAATGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGTCACTGGTGAGACGATCGGTAAGTGTAATGACGCGAAAGGGTAGAGTACTCTTGTTTACTATTGTTTGCATTTTCATTATTTCCATGCTCCTTACTACTAGTACAGCTCTAATTATTATTTCTATCTGAATGCAAAAATGGATAGCCGAAATCTGTTCTGAAGACTCGAAAATCAGAATTTGATAGCATTTTGGATGATGATGATTCACCATCTCCTGTATCCGTTGAAGAGTCCTCTCTGCCGAATATCAATGACCTGATTATCGATTGCAATGTACGTATTTTTGCCGAAACCTCTGTTGTCCTTGTATGGTGTGTTTATCAATTGATCAATGGCTGGTATATATTGCTTTCTTCTTTACCACAAAATGATTTGTAATGTCCAAATGACATGAAAGATCTGTTTTATACTAGTCTGAAGAGAACTCTACATCTTCTAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGGCGTGGACGAATTCATAGCCATCTCGATCGTAGCTATAGCTTGCCAGTTACGTCGTCTCTGCAGACGAGTGGCCAAGTTTTGTGTGAAGCATCTTCCAAACTCACTTCAAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGAAGAGGCAAGCCATTAAGCTCTAAACCATTATTCAATAGGCTTGTTGAGTGATAGATATGTAGGGAAATTTCTGTTTGATTGTTAAGTAGGGTGGATGGAACTATCACTTTTTCTTCTTTTTTTTATTTTTTATTTTTTTTTATTTTTATGAGACTCACAATTTTGCT

mRNA sequence

GGCAACAAAGATTTATCCTTTATTCATTTAAGTAAGAAAATGGACAACTTTTGTAGAATGATATCGCCACCACAACCATGATGGTTGAAATATTCTTAATCCAATCAAACGCCGATTGTAAGCCCCATTTTTTTAGGAAGAAGAAGCCATTAGAAAGCAAACAGAAAAACAGAGCAGAGCAGAGGGAAGAGGAAAGAGAAGGAAGGCAAAATGGGAAGGCCACATGGTTAAAATACCCACCTTAAAATCGCCAGTCAAATTCGAAACCAACGGCTCTTTGTCACAAAATCCTAGCATCCTTTCAATGGAGCCGCAGATGCATATATTTGGGCGCGAAATATGGCTTGATTTTCAGAGTTCAGTTACTAAACTTCAGGGCAAATCATACAGAGAAAGAGAGAGAGAGAGAGAGAAAAAAAAAAAAAAAAAAGAAAAAAAAAAGGGAGAAAAAAGAGAGTGAGACTTCAATAACCCACCTGCGTTTCAAAACCTACTTCCATTAATCGCTGGAGTAAAAAGGGATTAAAGAATGGCGCAACCAAATTCGGAAGAGAAAGTGAGTGAGAATCCTGAAATGGAGGTCAACAAAGAAGCTATCAATGGCGATGGCGATGATGGAAGTAGTAACAGCAGCATTGCTAATTTGGCCTTCAGATTCAATGCTCAAGCGCCTGAGTTTTTCCCTAGATCGCAAACCCAGATGCCTGTTACTGGCTATTTTCACCCCTATTTCCATTTTCTTGGTGGGGGTCCTGCTACTTCAGATTGGTTCTTTATTGGGGATCAAGAACCAGCCTATTTGATCCCCAATCCCAACATTCCGCTCCCTAATTTCTCTAAGACTGCCCGTTCTGAAGAAATTCAGCAAAAAATCATCAAACAGGTAGAATATCAGCTCAGTGACATGAGTCTTCTTGCAAATGAGACTCTTGCAAAACACATTAGTAAAGATCCTGATGGTTATGTTCCGATTTCTATTCTTTCGTCGACCAAAAAAGTGAAGTCCCTCTCAACCAACAACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTTGTCAGTGCTGATGGGAAGAAAGTTAGACGTAAGCATCCATTCACAGAGAAGGATAAAGAAGAATTGCTGGTAAGATCAGCCATTGCCCGCTCAGTTGTTGTTGAGAATTTGCCCGAAAATCACTCGCATCACAACCTGGAGAAAATATTTAGTGTGATCGGAAGGTATGTGAAGACTATCCGAATCTGCCATCCCCCAGAATCGAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAGTAACAAGCTTCATGCACTTGTGGAGTTTGAGACAGGAGAGTTAGCTGAAAGAGCGGTGGAGCAGTTAAATGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGTCACTGGTGAGACGATCGGTAAGTCCGAAATCTGTTCTGAAGACTCGAAAATCAGAATTTGATAGCATTTTGGATGATGATGATTCACCATCTCCTGTATCCGTTGAAGAGTCCTCTCTGCCGAATATCAATGACCTGATTATCGATTGCAATGTACGTATTTTTGCCGAAACCTCTGTTGTCCTTTCTGAAGAGAACTCTACATCTTCTAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGGCGTGGACGAATTCATAGCCATCTCGATCGTAGCTATAGCTTGCCAGTTACGTCGTCTCTGCAGACGAGTGGCCAAGTTTTGTGTGAAGCATCTTCCAAACTCACTTCAAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGAAGAGGCAAGCCATTAAGCTCTAAACCATTATTCAATAGGCTTGTTGAGTGATAGATATGTAGGGAAATTTCTGTTTGATTGTTAAGTAGGGTGGATGGAACTATCACTTTTTCTTCTTTTTTTTATTTTTTATTTTTTTTTATTTTTATGAGACTCACAATTTTGCT

Coding sequence (CDS)

ATGGCGCAACCAAATTCGGAAGAGAAAGTGAGTGAGAATCCTGAAATGGAGGTCAACAAAGAAGCTATCAATGGCGATGGCGATGATGGAAGTAGTAACAGCAGCATTGCTAATTTGGCCTTCAGATTCAATGCTCAAGCGCCTGAGTTTTTCCCTAGATCGCAAACCCAGATGCCTGTTACTGGCTATTTTCACCCCTATTTCCATTTTCTTGGTGGGGGTCCTGCTACTTCAGATTGGTTCTTTATTGGGGATCAAGAACCAGCCTATTTGATCCCCAATCCCAACATTCCGCTCCCTAATTTCTCTAAGACTGCCCGTTCTGAAGAAATTCAGCAAAAAATCATCAAACAGGTAGAATATCAGCTCAGTGACATGAGTCTTCTTGCAAATGAGACTCTTGCAAAACACATTAGTAAAGATCCTGATGGTTATGTTCCGATTTCTATTCTTTCGTCGACCAAAAAAGTGAAGTCCCTCTCAACCAACAACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTTGTCAGTGCTGATGGGAAGAAAGTTAGACGTAAGCATCCATTCACAGAGAAGGATAAAGAAGAATTGCTGGTAAGATCAGCCATTGCCCGCTCAGTTGTTGTTGAGAATTTGCCCGAAAATCACTCGCATCACAACCTGGAGAAAATATTTAGTGTGATCGGAAGGTATGTGAAGACTATCCGAATCTGCCATCCCCCAGAATCGAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAGTAACAAGCTTCATGCACTTGTGGAGTTTGAGACAGGAGAGTTAGCTGAAAGAGCGGTGGAGCAGTTAAATGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGTCACTGGTGAGACGATCGGTAAGTCCGAAATCTGTTCTGAAGACTCGAAAATCAGAATTTGATAGCATTTTGGATGATGATGATTCACCATCTCCTGTATCCGTTGAAGAGTCCTCTCTGCCGAATATCAATGACCTGATTATCGATTGCAATGTACGTATTTTTGCCGAAACCTCTGTTGTCCTTTCTGAAGAGAACTCTACATCTTCTAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGGCGTGGACGAATTCATAGCCATCTCGATCGTAGCTATAGCTTGCCAGTTACGTCGTCTCTGCAGACGAGTGGCCAAGTTTTGTGTGAAGCATCTTCCAAACTCACTTCAAAGAGTCCAAGAATGCCTGATGGGACTAAAGGTTTCACCATGGGAAGAGGCAAGCCATTAAGCTCTAAACCATTATTCAATAGGCTTGTTGAGTGA

Protein sequence

MAQPNSEEKVSENPEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMPVTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEENSTSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPLFNRLVE

Homology

[Close]

BLAST of Clc09G19280 vs. NCBI nr
Match: XP_038900552.1 (la-related protein 6C [Benincasa hispida])

HSP 1 Score: 735.3 bits (1897), Expect = 3.0e-208
Identity = 386/442 (87.33%), Postives = 408/442 (92.31%), Query Frame = 0


Query: 1   MAQPNSEEKVSENPEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQ-TQMP 60
           MAQPNSE+KVSENPEMEV KE I GDG DGSSNS+IANLAFRFNAQAPEFFPR+Q TQMP
Sbjct: 1   MAQPNSEDKVSENPEMEVKKEIIYGDG-DGSSNSNIANLAFRFNAQAPEFFPRTQTTQMP 60

Query: 61  VTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQV 120
           VTGYFHPYFHFLGGGPA+SDWFFIGDQEPAYLIPNPNI LPNFSK ARSEEIQQKIIKQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIIKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETL+KHISKDPDGYV ISILS+TKKVKSLSTNN+FIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLSKHISKDPDGYVAISILSATKKVKSLSTNNSFIVQALRSSSRLVV 180

Query: 181 SADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIR 240
           SADGKKVRRK PFT+KD+EELL     +RSVV ENLPENHSHHNLEKIFSV+G  VKTIR
Sbjct: 181 SADGKKVRRKVPFTDKDREELL-----SRSVVAENLPENHSHHNLEKIFSVVGS-VKTIR 240

Query: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRS 300
           ICHPP+SNPCCSKGEL +SNKLHALVE+E+ ELAERAVE+LNDERNWRKGLRVR ++RR 
Sbjct: 241 ICHPPDSNPCCSKGELLISNKLHALVEYESPELAERAVEKLNDERNWRKGLRVRLMLRR- 300

Query: 301 VSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEEN 360
            SPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNI+DLI+DCN           SEEN
Sbjct: 301 -SPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNISDLIVDCN-----------SEEN 360

Query: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420
           STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT
Sbjct: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420

Query: 421 KGFTMGRGKPLSSKPLFNRLVE 442
           KGFTMGRG+P SSKPLFNRLV+
Sbjct: 421 KGFTMGRGRPFSSKPLFNRLVD 422

[Close]

BLAST of Clc09G19280 vs. NCBI nr
Match: XP_008459218.1 (PREDICTED: la-related protein 6C [Cucumis melo] >XP_016902378.1 PREDICTED: la-related protein 6C [Cucumis melo] >KAA0046016.1 la-related protein 6C [Cucumis melo var. makuwa] >TYK13575.1 la-related protein 6C [Cucumis melo var. makuwa])

HSP 1 Score: 720.7 bits (1859), Expect = 7.7e-204
Identity = 381/443 (86.00%), Postives = 399/443 (90.07%), Query Frame = 0


Query: 1   MAQPNSEEKVSEN-PEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMP 60
           MAQ N EEK SEN  EMEVN+EAI     DGSSNSS+ANLAFRFNAQAPEFFPR+Q QMP
Sbjct: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60

Query: 61  VTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQV 120
           VTGYFHPYFHFLGGGPA+SDWFFIGDQEPAYLIPNPNI LPNFSK ARSEEIQQKI+KQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIR 240
           S+DGK+VRRK PFT+KDKEELL     AR+VV ENLPENHSHHNLEKIFSV+G  VKTIR
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELL-----ARTVVAENLPENHSHHNLEKIFSVVGS-VKTIR 240

Query: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRS 300
           ICHPPESNPCCSKGELFVSNKLHALVEFET +LAERA+EQLNDERNWRKGLRVR LVRR 
Sbjct: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRR- 300

Query: 301 VSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEEN 360
            SPKSVLK RKSEFDS+LD+DDSPS VSVEE+ L NINDLI+DCN            EEN
Sbjct: 301 -SPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCN-----------PEEN 360

Query: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420
           STSSKKSWGRGRGKGRGRIH HLDRSYSLPVTSSLQTSGQVLCEASSKLT+KSPRMPDGT
Sbjct: 361 STSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGT 420

Query: 421 KGFTMGRGKPLSSK-PLFNRLVE 442
           KGFTMGRGKPLSSK PLFNRLV+
Sbjct: 421 KGFTMGRGKPLSSKPPLFNRLVD 424

[Close]

BLAST of Clc09G19280 vs. NCBI nr
Match: XP_004153773.2 (la-related protein 6C [Cucumis sativus] >KGN61778.2 hypothetical protein Csa_005956 [Cucumis sativus])

HSP 1 Score: 718.8 bits (1854), Expect = 2.9e-203
Identity = 380/442 (85.97%), Postives = 397/442 (89.82%), Query Frame = 0


Query: 1   MAQPNSEEKVSEN-PEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMP 60
           MAQ N EEK SEN  EME N+EAI     DGSSNSS+ANLAFRFNAQAPEFFPR+QTQMP
Sbjct: 1   MAQLNPEEKFSENHSEMEANQEAIINSESDGSSNSSLANLAFRFNAQAPEFFPRTQTQMP 60

Query: 61  VTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQV 120
           VTGYFHPYFHFLGGGPA+SDWFFIGDQEPAYLIPNPNI LPNFSK ARSEEIQQKI+KQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIR 240
           S+DGK+VRRK PFT+KDKEELL     AR+VV ENLPENHSHHNLEKIFSV+G  VKTIR
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELL-----ARTVVAENLPENHSHHNLEKIFSVVGS-VKTIR 240

Query: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRS 300
           ICHPPESNPCCSKGELFVSNKLHALVEFET ELAERA+EQLNDERNWRKGLRVR LVRR 
Sbjct: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRR- 300

Query: 301 VSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEEN 360
            SPKSVLK RKSEFDS+LD+DDSPSPVSVEES L NINDL +DCN           SEEN
Sbjct: 301 -SPKSVLKNRKSEFDSVLDEDDSPSPVSVEESPLQNINDLNVDCN-----------SEEN 360

Query: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420
           STS KKSWGRGRGKGRGRIH +LDRSYSLPVTSSLQTSGQVL EASSKLT+KSPRMPDGT
Sbjct: 361 STSLKKSWGRGRGKGRGRIHGNLDRSYSLPVTSSLQTSGQVLSEASSKLTTKSPRMPDGT 420

Query: 421 KGFTMGRGKPLSSKPLFNRLVE 442
           KGFTMGRGKPLSSKPL NRLV+
Sbjct: 421 KGFTMGRGKPLSSKPLVNRLVD 423

[Close]

BLAST of Clc09G19280 vs. NCBI nr
Match: XP_022148536.1 (la-related protein 6C [Momordica charantia])

HSP 1 Score: 683.7 bits (1763), Expect = 1.0e-192
Identity = 362/446 (81.17%), Postives = 392/446 (87.89%), Query Frame = 0


Query: 1   MAQPNSEEKVSENPEMEVNKEAINGDGD-----DGSSNSSIANLAFRFNAQAPEFFPRSQ 60
           MAQ NSEEKVSE PEME  KEA+NG+G+     DG SNSS  NL F+FNAQAPEFFPRSQ
Sbjct: 1   MAQANSEEKVSETPEME-TKEAVNGNGNGDGDGDGGSNSS-GNLPFKFNAQAPEFFPRSQ 60

Query: 61  TQMPVTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKI 120
           TQ+PVTGYFHPYFHFLGG PATSDWFFIGDQEPAYLIPN  IPLPNFSK  RS++IQQKI
Sbjct: 61  TQVPVTGYFHPYFHFLGGAPATSDWFFIGDQEPAYLIPNATIPLPNFSKNVRSDDIQQKI 120

Query: 121 IKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSS 180
           +KQVEYQ SDMSLLANE+LAKHISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS
Sbjct: 121 VKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSS 180

Query: 181 RLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYV 240
           RLVVS+DGKKVRRKHPFT+KDKEELL     +R+VVVENLP+NHSHHNLEKIFSVIG  V
Sbjct: 181 RLVVSSDGKKVRRKHPFTDKDKEELL-----SRTVVVENLPDNHSHHNLEKIFSVIGS-V 240

Query: 241 KTIRICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSL 300
           KTIRICHPPESNPCCSKGELF+SNKLHALVE+ET ELAERA E+LNDERNWRKGLRVR L
Sbjct: 241 KTIRICHPPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLL 300

Query: 301 VRRSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVL 360
           +RR  SPKSVLKTRKSEFDSILD+DDSPSPVS+EE SL NI +LI+DCN           
Sbjct: 301 LRR--SPKSVLKTRKSEFDSILDEDDSPSPVSIEEPSLSNITELIVDCN----------- 360

Query: 361 SEENSTSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRM 420
           SEENST+SKK WGRGRGKGRGRIHSH DR  S+PVT  +Q S QV+CEAS+KLTSKSPRM
Sbjct: 361 SEENSTASKKGWGRGRGKGRGRIHSHSDR--SVPVT-QVQASSQVVCEASTKLTSKSPRM 420

Query: 421 PDGTKGFTMGRGKPLSSKPLFNRLVE 442
           PDGTKGFTMGRGKPLSSKP+FNRLVE
Sbjct: 421 PDGTKGFTMGRGKPLSSKPVFNRLVE 422

[Close]

BLAST of Clc09G19280 vs. NCBI nr
Match: KAG7035140.1 (La-related protein 6C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 677.6 bits (1747), Expect = 7.5e-191
Identity = 350/437 (80.09%), Postives = 389/437 (89.02%), Query Frame = 0


Query: 1   MAQPNSEEKVSENPEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMPV 60
           MA+ N E+KV+ NPEMEV K+A+NGD   GSS S+  +L+F+FNAQAPEFFPRSQTQMPV
Sbjct: 1   MAESNPEKKVNPNPEMEVVKQAVNGDAGVGSSTSN-GDLSFKFNAQAPEFFPRSQTQMPV 60

Query: 61  TGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQVE 120
           TGYFHPYFHFLGG PATSDWFFIGDQEP YLIPNP IPLPNFSK  RS++I QK++KQVE
Sbjct: 61  TGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNPRSDDIHQKLVKQVE 120

Query: 121 YQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVVS 180
           YQ SDMSLLANE+LAK ISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS+LVVS
Sbjct: 121 YQFSDMSLLANESLAKSISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSKLVVS 180

Query: 181 ADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIRI 240
           ADGKKV+RKHPFT+KDKEELLVRS I+R+VVVENLP+NHSHHNLEKIFSVIG  VKT+RI
Sbjct: 181 ADGKKVKRKHPFTDKDKEELLVRSTISRTVVVENLPDNHSHHNLEKIFSVIGS-VKTVRI 240

Query: 241 CHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRSV 300
           CHPPESNPCCSKGELF+SNKLHALVE+ET ELAERA E+LNDERNWRKGLRVR L+RR  
Sbjct: 241 CHPPESNPCCSKGELFISNKLHALVEYETAELAERAAEKLNDERNWRKGLRVRLLLRR-- 300

Query: 301 SPKSVLKTRKSEFDSILDDDDSPSPVSVE-ESSLPNINDLIIDCNVRIFAETSVVLSEEN 360
           SPKSVLKTRKS+FD ILD+DDSPS VS E ESSLPNI +LI DC+           SEEN
Sbjct: 301 SPKSVLKTRKSDFDCILDEDDSPSTVSTEQESSLPNITELINDCS-----------SEEN 360

Query: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420
           STS+KK WGRGRGKGRGRIHSHLDRS SLPV +++Q+S QV+CEASSKLT+KSPRMPDGT
Sbjct: 361 STSAKKGWGRGRGKGRGRIHSHLDRSCSLPV-AAMQSSSQVVCEASSKLTTKSPRMPDGT 420

Query: 421 KGFTMGRGKPLSSKPLF 437
           KGFTMGRGKPLSSKP+F
Sbjct: 421 KGFTMGRGKPLSSKPVF 421

[Close]

BLAST of Clc09G19280 vs. ExPASy Swiss-Prot
Match: Q9LHL3 (La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 4.2e-96
Identity = 222/476 (46.64%), Postives = 294/476 (61.76%), Query Frame = 0


Query: 1   MAQPNSEEKVSENPEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQ--- 60
           MAQ   EE  S      V  E    DG  GSS +     AF+FNAQAPEF PRS T    
Sbjct: 1   MAQMQREEVES------VTTEKKRLDGGGGSSGAQAT--AFKFNAQAPEFVPRSHTTAPA 60

Query: 61  ---MPVTGYFHPYFHFLGG-----------------GPATSDWFFIGDQEP--------- 120
               PV+GYF+P FH+ GG                 G  +SDW ++G  +P         
Sbjct: 61  PQVSPVSGYFYPCFHYNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHD 120

Query: 121 ---AYLIPNPNIPLP------NFSKTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHIS 180
              A+ I NP +  P      + SK   S++++ KI+KQVEYQ +DMSLLANE+++KHIS
Sbjct: 121 PAAAFYISNPAVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHIS 180

Query: 181 KDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEE 240
           KDP+GYVP+S ++STKK+K+L++N++ +  ALRSSS+LVVS DGKKV+R   FT++D+EE
Sbjct: 181 KDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREE 240

Query: 241 LLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIRICHPPESNPCCSKGELFVSN 300
           L       R+VV ENLP++HS+ NLEKIF V+G  VK IRICHPPESN    KG+  +SN
Sbjct: 241 LQ-----GRTVVAENLPDDHSYQNLEKIFGVVGN-VKAIRICHPPESNSSRPKGDFLMSN 300

Query: 301 KLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRSVSPKSVLKTRKSEFDSILDD 360
           K+HAL+E++   +A++AVE+LNDERNWRKGLRVR L+R   SPKSVLK R++ FD IL D
Sbjct: 301 KIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLR--CSPKSVLKNRRN-FDGILID 360

Query: 361 DDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEENSTSSKKSWGRGRGKGRGRIH 420
           D+ PS  S E+S   ++ +  +D +            ++N+      WG+GRGKGRGR  
Sbjct: 361 DELPSYESGEDSPRLHLTESQLDND-----------GDDNNVGG--LWGKGRGKGRGRSP 420

Query: 421 SHL-----DRSYSLPVTSSLQTSGQVLCEASS-KLTSKSPRMPDGTKGFTMGRGKP 430
                    RS+ + +  SL        E+SS K  +K PRMPDGT+GFTMGRGKP
Sbjct: 421 RSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTATKGPRMPDGTRGFTMGRGKP 446

[Close]

BLAST of Clc09G19280 vs. ExPASy Swiss-Prot
Match: O80567 (La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 9.5e-48
Identity = 132/363 (36.36%), Postives = 192/363 (52.89%), Query Frame = 0


Query: 103 SKTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLST 162
           SKT   E+  QKI+ QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 163 NNNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHH 222
           NN+ +   L++S++L VS DGKKVRR  P TE   EEL      +R +V ENLPE+H + 
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQ-----SRIIVAENLPEDHCYQ 304

Query: 223 NLEKIFSVIGRYVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETGELA 282
           NL KIFS +G  VK IR C P  +         +   S G LF SNK+HA VE+E  ELA
Sbjct: 305 NLMKIFSTVGS-VKNIRTCQPQNNGSGAPPAARSAAKSDGTLF-SNKVHAFVEYEIVELA 364

Query: 283 ERAVEQLNDERNWRKGLRVRSLVR-RSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESS 342
           ERAV +L++  NWR GL+VR +++ ++  PK      +   D+ ++ ++  +  S ++  
Sbjct: 365 ERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPI 424

Query: 343 LPNINDLIIDCNVRIFAE-TSVVLSEENSTSSKKSWGRGRGKGRGR-------------- 402
               +D   + +  +  +        E +   +K   RGRGKGRGR              
Sbjct: 425 EKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHS 484

Query: 403 ---IHSHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGTKGFTMGRG 431
               H+H  R        + +    S      +      K     PRMPDGT+GF+MGRG
Sbjct: 485 HNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRG 540

[Close]

BLAST of Clc09G19280 vs. ExPASy Swiss-Prot
Match: Q94A38 (La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.4e-37
Identity = 115/324 (35.49%), Postives = 175/324 (54.01%), Query Frame = 0


Query: 109 EEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIV 168
           +E+ QKII+QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 169 QALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIF 228
            AL+ SS LVVSAD KKV+R  P  E       +R     +V+VENLPE+HS+ N+ +IF
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPE-------IRDPKIFTVLVENLPEDHSNENIREIF 220

Query: 229 SVIGRYVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNW 288
              G  +K++ IC P   E +    K E F+  +LHA VE+ET E AE+A   LN+E++W
Sbjct: 221 GKAGS-IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDW 280

Query: 289 RKGLRVRSLVRRSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVR 348
           R GLRV+ L+ ++    +  +  + E D    + D+   V  +     N        N R
Sbjct: 281 RNGLRVK-LLEQAAGKFAQRRPARREVDK---EKDTTGRVHDQTGGEKN-KKTREHQNHR 340

Query: 349 IFAETSVVLSEENSTSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASS 408
           +    +    +  +    K+  +GR  G+GR  +H   +     T+S  +         S
Sbjct: 341 LHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVS 400

Query: 409 KLTSKSPRMPDGTKGFTMGRGKPL 431
           K     PRMPDGT+GFTMGRGK +
Sbjct: 401 K-RPPGPRMPDGTRGFTMGRGKAI 410

[Close]

BLAST of Clc09G19280 vs. ExPASy Swiss-Prot
Match: Q4G0J3 (La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.5e-18
Identity = 69/212 (32.55%), Postives = 112/212 (52.83%), Query Frame = 0


Query: 104 KTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN 163
           K +R +++   I KQV++   D +L  +  L + I K  DGYV IS+L S  K+K L+T+
Sbjct: 27  KRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTD 86

Query: 164 NNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHN 223
              I +ALRSS+ + +  +G ++RRK P  E+ K+E        R+V VE LP+N +H  
Sbjct: 87  GKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDE------DERTVYVELLPKNVNHSW 146

Query: 224 LEKIFSVIGRYVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLN-- 283
           +E++F   G  V  I I H   +             K  A VEFET E A +A+E LN  
Sbjct: 147 IERVFGKCGNVV-YISIPHYKSTG----------DPKGFAFVEFETKEQAAKAIEFLNNP 206

Query: 284 -DERNWRKGLRVRSLVRRSVSPKSVLKTRKSE 313
            +E   + G+  +++  + +    V++ +K +
Sbjct: 207 PEEAPRKPGIFPKTVKNKPIPALRVVEEKKKK 221

[Close]

BLAST of Clc09G19280 vs. ExPASy Swiss-Prot
Match: Q05CL8 (La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 4.6e-18
Identity = 69/212 (32.55%), Postives = 112/212 (52.83%), Query Frame = 0


Query: 104 KTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN 163
           K +R +++   I KQV++   D +L  ++ L + I K  DGYV IS+L S  K+K L+T+
Sbjct: 21  KRSRVKQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTD 80

Query: 164 NNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHN 223
              I +AL+SSS + +  +G ++RRK P  E+ K+E        R+V VE LP+N +H  
Sbjct: 81  GKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDE------EERTVYVELLPKNVTHSW 140

Query: 224 LEKIFSVIGRYVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLN-- 283
           +E++F   G  V  I I H   +             K  A VEFET E A +A+E LN  
Sbjct: 141 IERVFGKCGNVV-YISIPHYKSTG----------DPKGFAFVEFETKEQAAKAIEFLNNP 200

Query: 284 -DERNWRKGLRVRSLVRRSVSPKSVLKTRKSE 313
            +E   + G+  +++  + +    V + +K +
Sbjct: 201 PEEAPRKPGIFPKTVKNKPIPSLRVAEEKKKK 215

[Close]

BLAST of Clc09G19280 vs. ExPASy TrEMBL
Match: A0A1S4E2C7 (la-related protein 6C OS=Cucumis melo OX=3656 GN=LOC103498409 PE=4 SV=1)

HSP 1 Score: 720.7 bits (1859), Expect = 3.7e-204
Identity = 381/443 (86.00%), Postives = 399/443 (90.07%), Query Frame = 0


Query: 1   MAQPNSEEKVSEN-PEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMP 60
           MAQ N EEK SEN  EMEVN+EAI     DGSSNSS+ANLAFRFNAQAPEFFPR+Q QMP
Sbjct: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60

Query: 61  VTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQV 120
           VTGYFHPYFHFLGGGPA+SDWFFIGDQEPAYLIPNPNI LPNFSK ARSEEIQQKI+KQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIR 240
           S+DGK+VRRK PFT+KDKEELL     AR+VV ENLPENHSHHNLEKIFSV+G  VKTIR
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELL-----ARTVVAENLPENHSHHNLEKIFSVVGS-VKTIR 240

Query: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRS 300
           ICHPPESNPCCSKGELFVSNKLHALVEFET +LAERA+EQLNDERNWRKGLRVR LVRR 
Sbjct: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRR- 300

Query: 301 VSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEEN 360
            SPKSVLK RKSEFDS+LD+DDSPS VSVEE+ L NINDLI+DCN            EEN
Sbjct: 301 -SPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCN-----------PEEN 360

Query: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420
           STSSKKSWGRGRGKGRGRIH HLDRSYSLPVTSSLQTSGQVLCEASSKLT+KSPRMPDGT
Sbjct: 361 STSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGT 420

Query: 421 KGFTMGRGKPLSSK-PLFNRLVE 442
           KGFTMGRGKPLSSK PLFNRLV+
Sbjct: 421 KGFTMGRGKPLSSKPPLFNRLVD 424

[Close]

BLAST of Clc09G19280 vs. ExPASy TrEMBL
Match: A0A5A7TV41 (La-related protein 6C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00570 PE=4 SV=1)

HSP 1 Score: 720.7 bits (1859), Expect = 3.7e-204
Identity = 381/443 (86.00%), Postives = 399/443 (90.07%), Query Frame = 0


Query: 1   MAQPNSEEKVSEN-PEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMP 60
           MAQ N EEK SEN  EMEVN+EAI     DGSSNSS+ANLAFRFNAQAPEFFPR+Q QMP
Sbjct: 1   MAQLNPEEKFSENHSEMEVNQEAITNSDSDGSSNSSLANLAFRFNAQAPEFFPRTQPQMP 60

Query: 61  VTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQV 120
           VTGYFHPYFHFLGGGPA+SDWFFIGDQEPAYLIPNPNI LPNFSK ARSEEIQQKI+KQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVV 180

Query: 181 SADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIR 240
           S+DGK+VRRK PFT+KDKEELL     AR+VV ENLPENHSHHNLEKIFSV+G  VKTIR
Sbjct: 181 SSDGKRVRRKVPFTDKDKEELL-----ARTVVAENLPENHSHHNLEKIFSVVGS-VKTIR 240

Query: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRS 300
           ICHPPESNPCCSKGELFVSNKLHALVEFET +LAERA+EQLNDERNWRKGLRVR LVRR 
Sbjct: 241 ICHPPESNPCCSKGELFVSNKLHALVEFETVDLAERAIEQLNDERNWRKGLRVRPLVRR- 300

Query: 301 VSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEEN 360
            SPKSVLK RKSEFDS+LD+DDSPS VSVEE+ L NINDLI+DCN            EEN
Sbjct: 301 -SPKSVLKNRKSEFDSVLDEDDSPSSVSVEETPLQNINDLIVDCN-----------PEEN 360

Query: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420
           STSSKKSWGRGRGKGRGRIH HLDRSYSLPVTSSLQTSGQVLCEASSKLT+KSPRMPDGT
Sbjct: 361 STSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPRMPDGT 420

Query: 421 KGFTMGRGKPLSSK-PLFNRLVE 442
           KGFTMGRGKPLSSK PLFNRLV+
Sbjct: 421 KGFTMGRGKPLSSKPPLFNRLVD 424

[Close]

BLAST of Clc09G19280 vs. ExPASy TrEMBL
Match: A0A0A0LIU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G235610 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 1.2e-199
Identity = 380/465 (81.72%), Postives = 397/465 (85.38%), Query Frame = 0


Query: 1   MAQPNSEEKVSEN-PEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMP 60
           MAQ N EEK SEN  EME N+EAI     DGSSNSS+ANLAFRFNAQAPEFFPR+QTQMP
Sbjct: 1   MAQLNPEEKFSENHSEMEANQEAIINSESDGSSNSSLANLAFRFNAQAPEFFPRTQTQMP 60

Query: 61  VTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQV 120
           VTGYFHPYFHFLGGGPA+SDWFFIGDQEPAYLIPNPNI LPNFSK ARSEEIQQKI+KQV
Sbjct: 61  VTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSEEIQQKIVKQV 120

Query: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRL-- 180
           EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRL  
Sbjct: 121 EYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVS 180

Query: 181 ---------------------VVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLP 240
                                VVS+DGK+VRRK PFT+KDKEELL     AR+VV ENLP
Sbjct: 181 SVVEHSVLYSLLIIDQYLVPKVVSSDGKRVRRKVPFTDKDKEELL-----ARTVVAENLP 240

Query: 241 ENHSHHNLEKIFSVIGRYVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETGELAERA 300
           ENHSHHNLEKIFSV+G  VKTIRICHPPESNPCCSKGELFVSNKLHALVEFET ELAERA
Sbjct: 241 ENHSHHNLEKIFSVVGS-VKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERA 300

Query: 301 VEQLNDERNWRKGLRVRSLVRRSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNI 360
           +EQLNDERNWRKGLRVR LVRR  SPKSVLK RKSEFDS+LD+DDSPSPVSVEES L NI
Sbjct: 301 IEQLNDERNWRKGLRVRPLVRR--SPKSVLKNRKSEFDSVLDEDDSPSPVSVEESPLQNI 360

Query: 361 NDLIIDCNVRIFAETSVVLSEENSTSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQT 420
           NDL +DCN           SEENSTS KKSWGRGRGKGRGRIH +LDRSYSLPVTSSLQT
Sbjct: 361 NDLNVDCN-----------SEENSTSLKKSWGRGRGKGRGRIHGNLDRSYSLPVTSSLQT 420

Query: 421 SGQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPLSSKPLFNRLVE 442
           SGQVL EASSKLT+KSPRMPDGTKGFTMGRGKPLSSKPL NRLV+
Sbjct: 421 SGQVLSEASSKLTTKSPRMPDGTKGFTMGRGKPLSSKPLVNRLVD 446

[Close]

BLAST of Clc09G19280 vs. ExPASy TrEMBL
Match: A0A6J1D5P1 (la-related protein 6C OS=Momordica charantia OX=3673 GN=LOC111017163 PE=4 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 5.0e-193
Identity = 362/446 (81.17%), Postives = 392/446 (87.89%), Query Frame = 0


Query: 1   MAQPNSEEKVSENPEMEVNKEAINGDGD-----DGSSNSSIANLAFRFNAQAPEFFPRSQ 60
           MAQ NSEEKVSE PEME  KEA+NG+G+     DG SNSS  NL F+FNAQAPEFFPRSQ
Sbjct: 1   MAQANSEEKVSETPEME-TKEAVNGNGNGDGDGDGGSNSS-GNLPFKFNAQAPEFFPRSQ 60

Query: 61  TQMPVTGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKI 120
           TQ+PVTGYFHPYFHFLGG PATSDWFFIGDQEPAYLIPN  IPLPNFSK  RS++IQQKI
Sbjct: 61  TQVPVTGYFHPYFHFLGGAPATSDWFFIGDQEPAYLIPNATIPLPNFSKNVRSDDIQQKI 120

Query: 121 IKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSS 180
           +KQVEYQ SDMSLLANE+LAKHISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS
Sbjct: 121 VKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSS 180

Query: 181 RLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYV 240
           RLVVS+DGKKVRRKHPFT+KDKEELL     +R+VVVENLP+NHSHHNLEKIFSVIG  V
Sbjct: 181 RLVVSSDGKKVRRKHPFTDKDKEELL-----SRTVVVENLPDNHSHHNLEKIFSVIGS-V 240

Query: 241 KTIRICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSL 300
           KTIRICHPPESNPCCSKGELF+SNKLHALVE+ET ELAERA E+LNDERNWRKGLRVR L
Sbjct: 241 KTIRICHPPESNPCCSKGELFISNKLHALVEYETVELAERAAEKLNDERNWRKGLRVRLL 300

Query: 301 VRRSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVL 360
           +RR  SPKSVLKTRKSEFDSILD+DDSPSPVS+EE SL NI +LI+DCN           
Sbjct: 301 LRR--SPKSVLKTRKSEFDSILDEDDSPSPVSIEEPSLSNITELIVDCN----------- 360

Query: 361 SEENSTSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRM 420
           SEENST+SKK WGRGRGKGRGRIHSH DR  S+PVT  +Q S QV+CEAS+KLTSKSPRM
Sbjct: 361 SEENSTASKKGWGRGRGKGRGRIHSHSDR--SVPVT-QVQASSQVVCEASTKLTSKSPRM 420

Query: 421 PDGTKGFTMGRGKPLSSKPLFNRLVE 442
           PDGTKGFTMGRGKPLSSKP+FNRLVE
Sbjct: 421 PDGTKGFTMGRGKPLSSKPVFNRLVE 422

[Close]

BLAST of Clc09G19280 vs. ExPASy TrEMBL
Match: A0A6J1L340 (la-related protein 6C OS=Cucurbita maxima OX=3661 GN=LOC111499965 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.5e-189
Identity = 355/437 (81.24%), Postives = 391/437 (89.47%), Query Frame = 0


Query: 1   MAQPNSEEKVSENPEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQMPV 60
           MA+ NSEEKV+ENPEMEV KEA+NGDG  GSSNS+  NL+F+FNAQAPEFFPRSQTQMPV
Sbjct: 1   MAEANSEEKVNENPEMEV-KEAVNGDG-VGSSNSN-GNLSFKFNAQAPEFFPRSQTQMPV 60

Query: 61  TGYFHPYFHFLGGGPATSDWFFIGDQEPAYLIPNPNIPLPNFSKTARSEEIQQKIIKQVE 120
           TGYFHPYFHFLGG PATSDWFFIGDQEP YLIPNP IPLPNFSK ARSE+IQQKI+KQVE
Sbjct: 61  TGYFHPYFHFLGGAPATSDWFFIGDQEPTYLIPNPTIPLPNFSKNARSEDIQQKIVKQVE 120

Query: 121 YQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVVS 180
           YQ SDMSLLANE+LAK+ISKDPDGYVPIS++SSTKKVKSLSTNNN IVQALRSSS+LVVS
Sbjct: 121 YQFSDMSLLANESLAKNISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSKLVVS 180

Query: 181 ADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIRI 240
           ADGKKV+RKHPFT+KDKEELL     +R+VVVENLP+NHSHHNLEKIFSVIG  VKTIRI
Sbjct: 181 ADGKKVKRKHPFTDKDKEELL-----SRTVVVENLPDNHSHHNLEKIFSVIGS-VKTIRI 240

Query: 241 CHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRSV 300
           CHPPESNPCCSKGELF+SNKLHALVE+ET ELA+RA E+LNDERNWRKGLRVR L+RR  
Sbjct: 241 CHPPESNPCCSKGELFISNKLHALVEYETVELADRAAEKLNDERNWRKGLRVRLLLRR-- 300

Query: 301 SPKSVLKTRKSEFDSILDDDDSPSPVSVE-ESSLPNINDLIIDCNVRIFAETSVVLSEEN 360
           SPKSVLKTRKSEF+SILD+DDSPSPVS+E ES   NI +LI D +           SEEN
Sbjct: 301 SPKSVLKTRKSEFESILDEDDSPSPVSIEQESPQSNIAELITDFS-----------SEEN 360

Query: 361 STSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGT 420
           STSSKK WGRGRGKGRGR+H+HLDRSYSLPVT ++Q+S Q+LCEASSKLTSKSPRMPDGT
Sbjct: 361 STSSKKGWGRGRGKGRGRVHNHLDRSYSLPVT-AMQSSSQILCEASSKLTSKSPRMPDGT 414

Query: 421 KGFTMGRGKPLSSKPLF 437
           KGFTMGRGKPL+SK +F
Sbjct: 421 KGFTMGRGKPLNSKSVF 414

[Close]

BLAST of Clc09G19280 vs. TAIR 10
Match: AT3G19090.1 (RNA-binding protein )

HSP 1 Score: 353.2 bits (905), Expect = 3.0e-97
Identity = 222/476 (46.64%), Postives = 294/476 (61.76%), Query Frame = 0


Query: 1   MAQPNSEEKVSENPEMEVNKEAINGDGDDGSSNSSIANLAFRFNAQAPEFFPRSQTQ--- 60
           MAQ   EE  S      V  E    DG  GSS +     AF+FNAQAPEF PRS T    
Sbjct: 1   MAQMQREEVES------VTTEKKRLDGGGGSSGAQAT--AFKFNAQAPEFVPRSHTTAPA 60

Query: 61  ---MPVTGYFHPYFHFLGG-----------------GPATSDWFFIGDQEP--------- 120
               PV+GYF+P FH+ GG                 G  +SDW ++G  +P         
Sbjct: 61  PQVSPVSGYFYPCFHYNGGCIGGCGGGVCGGGGTGVGTQSSDWIYVGGGDPTAQHQHVHD 120

Query: 121 ---AYLIPNPNIPLP------NFSKTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHIS 180
              A+ I NP +  P      + SK   S++++ KI+KQVEYQ +DMSLLANE+++KHIS
Sbjct: 121 PAAAFYISNPAVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHIS 180

Query: 181 KDPDGYVPISILSSTKKVKSLSTNNNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEE 240
           KDP+GYVP+S ++STKK+K+L++N++ +  ALRSSS+LVVS DGKKV+R   FT++D+EE
Sbjct: 181 KDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREE 240

Query: 241 LLVRSAIARSVVVENLPENHSHHNLEKIFSVIGRYVKTIRICHPPESNPCCSKGELFVSN 300
           L       R+VV ENLP++HS+ NLEKIF V+G  VK IRICHPPESN    KG+  +SN
Sbjct: 241 LQ-----GRTVVAENLPDDHSYQNLEKIFGVVGN-VKAIRICHPPESNSSRPKGDFLMSN 300

Query: 301 KLHALVEFETGELAERAVEQLNDERNWRKGLRVRSLVRRSVSPKSVLKTRKSEFDSILDD 360
           K+HAL+E++   +A++AVE+LNDERNWRKGLRVR L+R   SPKSVLK R++ FD IL D
Sbjct: 301 KIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLR--CSPKSVLKNRRN-FDGILID 360

Query: 361 DDSPSPVSVEESSLPNINDLIIDCNVRIFAETSVVLSEENSTSSKKSWGRGRGKGRGRIH 420
           D+ PS  S E+S   ++ +  +D +            ++N+      WG+GRGKGRGR  
Sbjct: 361 DELPSYESGEDSPRLHLTESQLDND-----------GDDNNVGG--LWGKGRGKGRGRSP 420

Query: 421 SHL-----DRSYSLPVTSSLQTSGQVLCEASS-KLTSKSPRMPDGTKGFTMGRGKP 430
                    RS+ + +  SL        E+SS K  +K PRMPDGT+GFTMGRGKP
Sbjct: 421 RSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTATKGPRMPDGTRGFTMGRGKP 446

[Close]

BLAST of Clc09G19280 vs. TAIR 10
Match: AT2G43970.1 (RNA-binding protein )

HSP 1 Score: 192.6 bits (488), Expect = 6.8e-49
Identity = 132/363 (36.36%), Postives = 192/363 (52.89%), Query Frame = 0


Query: 103 SKTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLST 162
           SKT   E+  QKI+ QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 163 NNNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHH 222
           NN+ +   L++S++L VS DGKKVRR  P TE   EEL      +R +V ENLPE+H + 
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQ-----SRIIVAENLPEDHCYQ 304

Query: 223 NLEKIFSVIGRYVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETGELA 282
           NL KIFS +G  VK IR C P  +         +   S G LF SNK+HA VE+E  ELA
Sbjct: 305 NLMKIFSTVGS-VKNIRTCQPQNNGSGAPPAARSAAKSDGTLF-SNKVHAFVEYEIVELA 364

Query: 283 ERAVEQLNDERNWRKGLRVRSLVR-RSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESS 342
           ERAV +L++  NWR GL+VR +++ ++  PK      +   D+ ++ ++  +  S ++  
Sbjct: 365 ERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPI 424

Query: 343 LPNINDLIIDCNVRIFAE-TSVVLSEENSTSSKKSWGRGRGKGRGR-------------- 402
               +D   + +  +  +        E +   +K   RGRGKGRGR              
Sbjct: 425 EKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHS 484

Query: 403 ---IHSHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGTKGFTMGRG 431
               H+H  R        + +    S      +      K     PRMPDGT+GF+MGRG
Sbjct: 485 HNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRG 540

[Close]

BLAST of Clc09G19280 vs. TAIR 10
Match: AT2G43970.2 (RNA-binding protein )

HSP 1 Score: 163.3 bits (412), Expect = 4.4e-40
Identity = 116/354 (32.77%), Postives = 174/354 (49.15%), Query Frame = 0


Query: 103 SKTARSEEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLST 162
           SKT   E+  QKI+ QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  
Sbjct: 185 SKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVIN 244

Query: 163 NNNFIVQALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHH 222
           NN+ +   L++S++L VS DGKKVRR  P TE   EEL      +R +V ENLPE+H + 
Sbjct: 245 NNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQ-----SRIIVAENLPEDHCYQ 304

Query: 223 NLEKIFSVIGRYVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLND 282
           NL KIFS +G  VK IR C P  +           +           G L    V +L++
Sbjct: 305 NLMKIFSTVGS-VKNIRTCQPQNNGSGAPPAARSAAK--------SDGTLFSNKVTELSE 364

Query: 283 ERNWRKGLRVRSLVR-RSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLII 342
             NWR GL+VR +++ ++  PK      +   D+ ++ ++  +  S ++      +D   
Sbjct: 365 AGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQSDDCSG 424

Query: 343 DCNVRIFAE-TSVVLSEENSTSSKKSWGRGRGKGRGR-----------------IHSHLD 402
           + +  +  +        E +   +K   RGRGKGRGR                  H+H  
Sbjct: 425 EWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNG 484

Query: 403 RS-------YSLPVTSSLQTSGQVLCEASSKLTSKSPRMPDGTKGFTMGRGKPL 431
           R        + +    S      +      K     PRMPDGT+GF+MGRGKP+
Sbjct: 485 RGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPV 524

[Close]

BLAST of Clc09G19280 vs. TAIR 10
Match: AT5G46250.1 (RNA-binding protein )

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-38
Identity = 115/324 (35.49%), Postives = 175/324 (54.01%), Query Frame = 0


Query: 109 EEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIV 168
           +E+ QKII+QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 169 QALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIF 228
            AL+ SS LVVSAD KKV+R  P  E       +R     +V+VENLPE+HS+ N+ +IF
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPE-------IRDPKIFTVLVENLPEDHSNENIREIF 220

Query: 229 SVIGRYVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNW 288
              G  +K++ IC P   E +    K E F+  +LHA VE+ET E AE+A   LN+E++W
Sbjct: 221 GKAGS-IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDW 280

Query: 289 RKGLRVRSLVRRSVSPKSVLKTRKSEFDSILDDDDSPSPVSVEESSLPNINDLIIDCNVR 348
           R GLRV+ L+ ++    +  +  + E D    + D+   V  +     N        N R
Sbjct: 281 RNGLRVK-LLEQAAGKFAQRRPARREVDK---EKDTTGRVHDQTGGEKN-KKTREHQNHR 340

Query: 349 IFAETSVVLSEENSTSSKKSWGRGRGKGRGRIHSHLDRSYSLPVTSSLQTSGQVLCEASS 408
           +    +    +  +    K+  +GR  G+GR  +H   +     T+S  +         S
Sbjct: 341 LHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVS 400

Query: 409 KLTSKSPRMPDGTKGFTMGRGKPL 431
           K     PRMPDGT+GFTMGRGK +
Sbjct: 401 K-RPPGPRMPDGTRGFTMGRGKAI 410

[Close]

BLAST of Clc09G19280 vs. TAIR 10
Match: AT5G46250.3 (RNA-binding protein )

HSP 1 Score: 142.9 bits (359), Expect = 6.2e-34
Identity = 83/189 (43.92%), Postives = 121/189 (64.02%), Query Frame = 0


Query: 109 EEIQQKIIKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNNNFIV 168
           +E+ QKII+QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 169 QALRSSSRLVVSADGKKVRRKHPFTEKDKEELLVRSAIARSVVVENLPENHSHHNLEKIF 228
            AL+ SS LVVSAD KKV+R  P  E       +R     +V+VENLPE+HS+ N+ +IF
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPE-------IRDPKIFTVLVENLPEDHSNENIREIF 220

Query: 229 SVIGRYVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETGELAERAVEQLNDERNW 288
              G  +K++ IC P   E +    K E F+  +LHA VE+ET E AE+AV  LN+E++W
Sbjct: 221 GKAGS-IKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAVTTLNNEQDW 280

Query: 289 RKGLRVRSL 296
           R GLRV+ L
Sbjct: 281 RNGLRVKLL 281

The following BLAST results are available for this feature:

BLAST of Clc09G19280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900552.1	3.0e-208	87.33	la-related protein 6C [Benincasa hispida]	[more]
XP_008459218.1	7.7e-204	86.00	PREDICTED: la-related protein 6C [Cucumis melo] >XP_016902378.1 PREDICTED: la-re...	[more]
XP_004153773.2	2.9e-203	85.97	la-related protein 6C [Cucumis sativus] >KGN61778.2 hypothetical protein Csa_005...	[more]
XP_022148536.1	1.0e-192	81.17	la-related protein 6C [Momordica charantia]	[more]
KAG7035140.1	7.5e-191	80.09	La-related protein 6C [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc09G19280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHL3	4.2e-96	46.64	La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1	[more]
O80567	9.5e-48	36.36	La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2	[more]
Q94A38	4.4e-37	35.49	La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1	[more]
Q4G0J3	3.5e-18	32.55	La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1	[more]
Q05CL8	4.6e-18	32.55	La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2	[more]

BLAST of Clc09G19280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2C7	3.7e-204	86.00	la-related protein 6C OS=Cucumis melo OX=3656 GN=LOC103498409 PE=4 SV=1	[more]
A0A5A7TV41	3.7e-204	86.00	La-related protein 6C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29...	[more]
A0A0A0LIU3	1.2e-199	81.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G235610 PE=4 SV=1	[more]
A0A6J1D5P1	5.0e-193	81.17	la-related protein 6C OS=Momordica charantia OX=3673 GN=LOC111017163 PE=4 SV=1	[more]
A0A6J1L340	1.5e-189	81.24	la-related protein 6C OS=Cucurbita maxima OX=3661 GN=LOC111499965 PE=4 SV=1	[more]

BLAST of Clc09G19280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19090.1	3.0e-97	46.64	RNA-binding protein	[more]
AT2G43970.1	6.8e-49	36.36	RNA-binding protein	[more]
AT2G43970.2	4.4e-40	32.77	RNA-binding protein	[more]
AT5G46250.1	3.2e-38	35.49	RNA-binding protein	[more]
AT5G46250.3	6.2e-34	43.92	RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 109..189 e-value: 5.9E-32 score: 122.2
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 115..172 e-value: 4.2E-14 score: 52.3
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 105..196 score: 23.272167
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 107..197 e-value: 5.4E-24 score: 85.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 210..282 e-value: 9.5E-6 score: 25.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 208..299 score: 8.978701
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 203..301 e-value: 6.3E-10 score: 41.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..441
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 6..432
None	No IPR available	PANTHER	PTHR22792:SF62	LA-RELATED PROTEIN 6C	coord: 6..432
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 201..297
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 106..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G19280.2	Clc09G19280.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding