Clc09G18780 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G18780
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr09: 31449345 .. 31449791 (+)
RNA-Seq Expression	Clc09G18780
Synteny	Clc09G18780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAGCAAATGGAAACGAGATGTATGAAAAGGCAGTGTGTGGTGTTGTTGGTATTGTTGTGTTTGGCAGTGCTTGAAGAAACCGAAGCTGCGGAGCTTGAAAAATGGCAGATCCATGTTGTGAACTGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCAATTGGAGATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACTTGCAGAAGCCGAATGGACTACATTTGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATCAAAAAGATGTTTTGATTCATAAGTGGGAATAA

mRNA sequence

ATGATGAAGCAAATGGAAACGAGATGTATGAAAAGGCAGTGTGTGGTGTTGTTGGTATTGTTGTGTTTGGCAGTGCTTGAAGAAACCGAAGCTGCGGAGCTTGAAAAATGGCAGATCCATGTTGTGAACTGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCAATTGGAGATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACTTGCAGAAGCCGAATGGACTACATTTGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATCAAAAAGATGTTTTGATTCATAAGTGGGAATAA

Coding sequence (CDS)

ATGATGAAGCAAATGGAAACGAGATGTATGAAAAGGCAGTGTGTGGTGTTGTTGGTATTGTTGTGTTTGGCAGTGCTTGAAGAAACCGAAGCTGCGGAGCTTGAAAAATGGCAGATCCATGTTGTGAACTGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTGAATTCAATTGGAGATTTAAAGTAAACTTTTGGAATACCACATTGTTTTGGTGTTACTTGCAGAAGCCGAATGGACTACATTTGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCTAAAGATGACGGAATTTATTTGAGGGACAACACTAATCAAAAAGATGTTTTGATTCATAAGTGGGAATAA

Protein sequence

MMKQMETRCMKRQCVVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE

Homology

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BLAST of Clc09G18780 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 120/144 (83.33%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 5   METRCMKRQCVVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDNDLGE 64
           ME RCM +QCVVL  +LCLA+L+E +AAEL KWQIHVVN LSNGQIL VHCKSKDNDLGE
Sbjct: 1   MEMRCMTKQCVVLFFVLCLAMLDENKAAELAKWQIHVVNGLSNGQILFVHCKSKDNDLGE 60

Query: 65  HKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDSNCIW 124
           HKLSVG+EFNWRF+VNFWNTTLFWCYLQKPN  H SF+AFWIESTSVWLY+MCYDSNCIW
Sbjct: 61  HKLSVGNEFNWRFRVNFWNTTLFWCYLQKPNAQHSSFQAFWIESTSVWLYNMCYDSNCIW 120

Query: 125 IAKDDGIYLRDNTNQKDVLIHKWE 149
           IAKDDG+YL+DNTN +DVLIHKWE
Sbjct: 121 IAKDDGVYLKDNTNHEDVLIHKWE 144

[Close]

BLAST of Clc09G18780 vs. NCBI nr
Match: XP_031745090.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62
Identity = 114/149 (76.51%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MMKQMETRCMKRQCVVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDN 60
           M KQ+E   MK+QCVVLL +LCLA+LEET+A ELEKW IHVVN LSNGQILL HCKSKDN
Sbjct: 3   MNKQIEIGHMKKQCVVLLFVLCLAILEETKAVELEKWHIHVVNGLSNGQILLAHCKSKDN 62

Query: 61  DLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDS 120
           DLGE +L  G+EFNWRF+VNFWNTTLFWCYLQKPNG H SFE+FWIES SVWLY MC++ 
Sbjct: 63  DLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQKPNGQHSSFESFWIESRSVWLYTMCFEK 122

Query: 121 NCIWIAKDDGIYLRDN-TNQKDVLIHKWE 149
           NCIW AKDDGIYL+DN    KD+LIHKWE
Sbjct: 123 NCIWTAKDDGIYLKDNFDTHKDILIHKWE 151

[Close]

BLAST of Clc09G18780 vs. NCBI nr
Match: KAE8646231.1 (hypothetical protein Csa_023825, partial [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-51
Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 34  LEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK 93
           LEKW IHVVN LSNGQILL HCKSKDNDLGE +L  G+EFNWRF+VNFWNTTLFWCYLQK
Sbjct: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60

Query: 94  PNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKWE 149
           PNG H SFE+FWIES SVWLY MC++ NCIW AKDDGIYL+DN    KD+LIHKWE
Sbjct: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 116

[Close]

BLAST of Clc09G18780 vs. NCBI nr
Match: XP_038896421.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 211.8 bits (538), Expect = 3.9e-51
Identity = 103/148 (69.59%), Postives = 114/148 (77.03%), Query Frame = 0


Query: 1   MMKQMETRCMKRQCVVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDN 60
           M KQME    K+QCVVLL  L L + EET+AAEL KWQIHVVN LS+GQIL VHCKSKD+
Sbjct: 1   MKKQMEMGRTKKQCVVLLFALFLVIFEETKAAELAKWQIHVVNGLSSGQILSVHCKSKDD 60

Query: 61  DLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDS 120
           DLGEHKLSVG+EFNW F+              KPN  H SFEAFWIES SVWLY+MCYDS
Sbjct: 61  DLGEHKLSVGTEFNWSFR--------------KPNAQHSSFEAFWIESRSVWLYNMCYDS 120

Query: 121 NCIWIAKDDGIYLRDNTNQKDVLIHKWE 149
           NCIW AKDDGIYL+DNT Q+D+LIHKWE
Sbjct: 121 NCIWTAKDDGIYLKDNTAQRDILIHKWE 134

[Close]

BLAST of Clc09G18780 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 211.1 bits (536), Expect = 6.6e-51
Identity = 94/149 (63.09%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 1   MMKQMETRCMKRQCVVLLVLLCLAVLEETEA-AELEKWQIHVVNWLSNGQILLVHCKSKD 60
           M + M  R  K+  +V L++L L +LE  EA +EL+KWQIHVVN LSNGQ L VHCKSKD
Sbjct: 1   MSQAMGVRSTKKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKD 60

Query: 61  NDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYD 120
           NDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G   SF+ FW+E  S+WL+  CY 
Sbjct: 61  NDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYH 120

Query: 121 SNCIWIAKDDGIYLRDNTNQKDVLIHKWE 149
           SNCIW AKDDGIYLRDN  Q+D+L+H+W+
Sbjct: 121 SNCIWTAKDDGIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of Clc09G18780 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 33  ELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQ 92
           ++ +WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ 
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 93  KPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE 149
           K NG H++   FW     V L+  C   NCIW AK DG+YL ++ + +DVL  KWE
Sbjct: 97  KDNG-HMNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Clc09G18780 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 33  ELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQ 92
           ++ +WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ 
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 93  KPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE 149
           K +G H++ + FW     V L+  C   NC+W AK+DG+YL ++   +DVL  KW+
Sbjct: 97  KDDG-HMNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Clc09G18780 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.3e-12
Identity = 44/134 (32.84%), Postives = 66/134 (49.25%), Query Frame = 0


Query: 15  VVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILL-VHCKSKDNDLGEHKLSVGSEF 74
           +V++ L+C   L+  EA E  +  +  V   ++   LL +HCKS+D+DLG H L+ G  F
Sbjct: 21  IVVISLICSEALQIQEAKEPIRGHLTRVTIQNDNDYLLGIHCKSRDDDLGFHILAKGELF 80

Query: 75  NWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYL 134
            W+F VNF  +TL++C   +       FE +          D    +NC W A+ DGIY 
Sbjct: 81  GWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANR------DFYRCANCTWKAEKDGIYG 140

Query: 135 RDNTNQKDVLIHKW 148
                 K  L + W
Sbjct: 141 YSEDPVKGYLFYNW 148

[Close]

BLAST of Clc09G18780 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 15  VVLLVLL-CLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEF 74
           +VL+ L+ C  +  + +   ++     VV +  N  +L VHCKS+D+D G H L  G  +
Sbjct: 7   IVLISLIGCETLQHDGKVFPMKGPLTRVVIYNDNDYLLGVHCKSRDDDHGFHILQKGGLY 66

Query: 75  NWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDS----NCIWIAKDD 134
            W F VNF N+TL++C           F    ++     +Y    DS    NC W AK+D
Sbjct: 67  GWMFYVNFMNSTLYFC----------GFSQEQVKKGVFDIYKAVRDSSRCRNCTWEAKED 126

Query: 135 GIYLRDNTNQKDVLIHKW 148
           GIY      +K+ L +KW
Sbjct: 127 GIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of Clc09G18780 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 35  EKWQIHVVNWLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQ 94
           +K  I V N L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L 
Sbjct: 22  KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLY 81

Query: 95  KPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNT 138
           K             ++  ++  D    S+  W+A+DDGIY   ++
Sbjct: 82  KGPDYKRYRGITAYQAIGLFAKD---GSSYNWLARDDGIYFHKDS 123

[Close]

BLAST of Clc09G18780 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.2e-51
Identity = 94/149 (63.09%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 1   MMKQMETRCMKRQCVVLLVLLCLAVLEETEA-AELEKWQIHVVNWLSNGQILLVHCKSKD 60
           M + M  R  K+  +V L++L L +LE  EA +EL+KWQIHVVN LSNGQ L VHCKSKD
Sbjct: 1   MSQAMGVRSTKKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKD 60

Query: 61  NDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYD 120
           NDLGEH L+ G+EFNW F+VN WNTTLFWCYL KP+G   SF+ FW+E  S+WL+  CY 
Sbjct: 61  NDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYH 120

Query: 121 SNCIWIAKDDGIYLRDNTNQKDVLIHKWE 149
           SNCIW AKDDGIYLRDN  Q+D+L+H+W+
Sbjct: 121 SNCIWTAKDDGIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of Clc09G18780 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.3e-48
Identity = 86/133 (64.66%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 15  VVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFN 74
           +V L +  LA++E+ EA  L KWQIHV N LSN Q+L VHCKSK++DLGEH LSVG+EFN
Sbjct: 10  LVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFN 69

Query: 75  WRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLR 134
           WRF+VN W+TTL+WCYLQKPNG  +SF+AFW+E  S+WLY  C +SNC W AKDDGIYLR
Sbjct: 70  WRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLR 129

Query: 135 DNTNQKDVLIHKW 148
           +N + +DV +HKW
Sbjct: 130 NNPDGRDVFVHKW 142

[Close]

BLAST of Clc09G18780 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.4e-46
Identity = 88/147 (59.86%), Postives = 112/147 (76.19%), Query Frame = 0


Query: 4   QMET-RCMKRQCVV--LLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDN 63
           ++ET R MK   +V   L +L LA+++ T+A  LE+W IH+VN LSN Q L VHC+SKD+
Sbjct: 25  KLETMRSMKNHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDD 84

Query: 64  DLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDS 123
           DLG+  LSVG+EFNW FK+NFW+TTLFWCYLQKPN   +SFEAFW+E  S+WL+  C+ S
Sbjct: 85  DLGKRYLSVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKS 144

Query: 124 NCIWIAKDDGIYLRDNTNQKDVLIHKW 148
           NCIW AKDDGIYL+DN   +D L+H W
Sbjct: 145 NCIWTAKDDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Clc09G18780 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.3e-46
Identity = 82/144 (56.94%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 5   METRCMKRQCVVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDNDLGE 64
           M  R +K+  +V+L+ L LA++E   + EL++W IHVVN L NG++L VHCKS+D+DLGE
Sbjct: 1   MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGE 60

Query: 65  HKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDSNCIW 124
             L  G+EF+W F+VN  +TTLFWC+L+KP+   +SF+AFW+E TS+WL+  CYD+NCIW
Sbjct: 61  QNLYDGAEFSWTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRCYDANCIW 120

Query: 125 IAKDDGIYLRDNTNQKDVLIHKWE 149
            AKDDG+YLRDN  Q+DVL+HKW+
Sbjct: 121 TAKDDGVYLRDNPVQRDVLVHKWQ 144

[Close]

BLAST of Clc09G18780 vs. ExPASy TrEMBL
Match: A0A6J1HAC3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 8.2e-39
Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 4   QMETRCMKRQCVVLLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDNDLG 63
           +M    +K Q +V LV   LA+     +    KW+IH+ N LSNGQ + VHCKSKDNDLG
Sbjct: 34  KMNAISLKNQVLVFLVASALAL---AASKPFSKWEIHIKNELSNGQAMFVHCKSKDNDLG 93

Query: 64  EHKLSVGSEFNWRFKVNFWNTTLFWCYLQKPNGLHLSFEAFWIESTSVWLYDMCYDSNCI 123
           EH L+ G+EF W FKVNFW+TTLFWCYL+KPNG  ++F+AFW+E  + WL   C  + C 
Sbjct: 94  EHTLATGTEFKWDFKVNFWDTTLFWCYLRKPNGHEMTFDAFWVEKRTEWLRVKCDGNICN 153

Query: 124 WIAKDDGIYLRDNTNQKDVLIHKWE 149
           W A+D+GIYL+DN+   D  +H W+
Sbjct: 154 WTAEDNGIYLKDNSENLDEFVHYWK 175

[Close]

BLAST of Clc09G18780 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 117.9 bits (294), Expect = 7.1e-27
Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 33  ELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQ 92
           ++ +WQ+ VVN L+ G+ L +HCKSK++DLGE  L   + F+W F  N  ++T FWCY+ 
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 93  KPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE 149
           K NG H++   FW     V L+  C   NCIW AK DG+YL ++ + +DVL  KWE
Sbjct: 97  KDNG-HMNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Clc09G18780 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 33  ELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQ 92
           ++ +WQ+ V N L+ G+ L +HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ 
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 93  KPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNTNQKDVLIHKWE 149
           K +G H++ + FW     V L+  C   NC+W AK+DG+YL ++   +DVL  KW+
Sbjct: 97  KDDG-HMNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Clc09G18780 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 75.9 bits (185), Expect = 3.1e-14
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 17  LLVLLCLAVLEETEAAELEKWQIHVVNWLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWR 76
           +++ LC+ V       E+ + ++ + N L + ++L VHC+SKD+DLGEH L +G ++ + 
Sbjct: 9   IVIGLCIGV--SNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFT 68

Query: 77  FKVNFWNTTLFWCYL-QKPN-GLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIY 133
           F  N W TT F C + Q PN   HL F A+    TS   +    +++C WI ++DGIY
Sbjct: 69  FGDNIWQTTSFSCQMDQGPNFKHHLDFVAY---ETS---WSKALEASCKWIGREDGIY 118

[Close]

BLAST of Clc09G18780 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 35  EKWQIHVVNWLS--NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQ 94
           +K  I V N L+  N  IL VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L 
Sbjct: 22  KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLY 81

Query: 95  KPNGLHLSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLRDNT 138
           K             ++  ++  D    S+  W+A+DDGIY   ++
Sbjct: 82  KGPDYKRYRGITAYQAIGLFAKD---GSSYNWLARDDGIYFHKDS 123

[Close]

BLAST of Clc09G18780 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-12
Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 47  NGQILLVHCKSKDNDLGEHKLSVGSEFNWRFKVNFWNTTLFWCYLQK-PN-GLHLSFEAF 106
           N ++L V C+SKD++LG+H L VG      F  N W  TLFWC L K P+  LH++F+A+
Sbjct: 31  NNKVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLHVAFDAY 90

Query: 107 WIESTSVWLYDMCYDSNCIWIAKDDGIY 133
                S W  D+      +WIA++DGIY
Sbjct: 91  ----RSQWKADI--GPRYLWIAREDGIY 112

The following BLAST results are available for this feature:

BLAST of Clc09G18780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896594.1	5.4e-69	83.33	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_031745090.1	1.3e-62	76.51	S-protein homolog 1-like [Cucumis sativus]	[more]
KAE8646231.1	3.0e-51	79.31	hypothetical protein Csa_023825, partial [Cucumis sativus]	[more]
XP_038896421.1	3.9e-51	69.59	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_022143772.1	6.6e-51	63.09	S-protein homolog 74-like [Momordica charantia]	[more]

BLAST of Clc09G18780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.0e-25	44.83	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	2.5e-24	42.24	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
P0DN92	6.3e-12	32.84	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
F2Q9V4	1.8e-11	32.61	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9LW22	2.4e-11	38.10	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]

BLAST of Clc09G18780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRU0	3.2e-51	63.09	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A6J1CPR8	4.3e-48	64.66	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1	[more]
A0A1S4E390	2.4e-46	59.86	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1	[more]
A0A6J1CQH6	5.3e-46	56.94	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1	[more]
A0A6J1HAC3	8.2e-39	51.72	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1	[more]

BLAST of Clc09G18780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	7.1e-27	44.83	S-protein homologue 1	[more]
AT4G29035.1	1.8e-25	42.24	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.1e-14	36.44	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	1.7e-12	38.10	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	5.0e-12	43.18	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 38..147 e-value: 1.0E-27 score: 96.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 34..147
None	No IPR available	PANTHER	PTHR31232:SF60	SUBFAMILY NOT NAMED	coord: 34..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G18780.1	Clc09G18780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region